; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0027202 (gene) of Chayote v1 genome

Gene IDSed0027202
OrganismSechium edule (Chayote v1)
Descriptioncalmodulin-like
Genome locationLG11:24382727..24383337
RNA-Seq ExpressionSed0027202
SyntenySed0027202
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022144156.1 probable calcium-binding protein CML15 [Momordica charantia]1.4e-2654.62Show/hide
Query:  QEEVDTFFKKYDKNRDGVITKDELFEVPRNQPKGKANKV-KVQKVPIR-AMQKQGSGPNLSREQIKEIFREHDIDGDGFLDSGEVTRAFGFLGSILPFYK
        + E     +KYDKN D +ITK+E+ +   N    KAN V K QKVP R A +K+      SR QIKEIF EHDIDGDG L   E+ +AF FLGS++P YK
Subjt:  QEEVDTFFKKYDKNRDGVITKDELFEVPRNQPKGKANKV-KVQKVPIR-AMQKQGSGPNLSREQIKEIFREHDIDGDGFLDSGEVTRAFGFLGSILPFYK

Query:  ARYGLAYADANGDGRIGEDELDQLVNYAQK
        A YGLA+AD +GDG I E+ELD+LV+YA+K
Subjt:  ARYGLAYADANGDGRIGEDELDQLVNYAQK

XP_022951879.1 calmodulin-like [Cucurbita moschata]7.6e-2848.65Show/hide
Query:  HHFRTQEEVDTFFKKYDKNRDGVITKDEL-FEVPRNQ--------PKGKANKV--KVQKVPIRAMQKQGSGPNLSREQIKEIFREHDIDGDGFLDSGEVT
        H    + E     + YDKN D  ++K+EL   +  NQ        P+ K   V  K QKVP +A +++G+   LSR QIKEIF EHDIDGDG+L   E+T
Subjt:  HHFRTQEEVDTFFKKYDKNRDGVITKDEL-FEVPRNQ--------PKGKANKV--KVQKVPIRAMQKQGSGPNLSREQIKEIFREHDIDGDGFLDSGEVT

Query:  RAFGFLGSILPFYKARYGLAYADANGDGRIGEDELDQLVNYAQKLYQK
        +AF F GSI+P YKA YGLAYADA+GDG I E+EL++LV+YA++  +K
Subjt:  RAFGFLGSILPFYKARYGLAYADANGDGRIGEDELDQLVNYAQKLYQK

XP_022951880.1 calmodulin-like [Cucurbita moschata]8.4e-2745.52Show/hide
Query:  HH---FRTQEEVDTFFKKYDKNRDGVITKDELF-----EVPRNQPKGKANKVKVQKVPIRAMQKQGSGPNLSREQIKEIFREHDIDGDGFLDSGEVTRAF
        HH   + ++ + +   KKYDKN D ++TKDEL      +  + Q   K    K +K P +  + +G    LSR +I++IF EHDIDGDG+L+  E+T+AF
Subjt:  HH---FRTQEEVDTFFKKYDKNRDGVITKDELF-----EVPRNQPKGKANKVKVQKVPIRAMQKQGSGPNLSREQIKEIFREHDIDGDGFLDSGEVTRAF

Query:  GFLGSILPFYKARYGLAYADANGDGRIGEDELDQLVNYAQKLYQK
         F+GS+LP YKA YGL YADA+GDGRI E+EL++LV+YA+++ ++
Subjt:  GFLGSILPFYKARYGLAYADANGDGRIGEDELDQLVNYAQKLYQK

XP_023002888.1 calmodulin-like [Cucurbita maxima]2.6e-2850.35Show/hide
Query:  QEEVDTFFKKYDKNRDGVITKDEL-FEVPRNQ--------PKGKANKV--KVQKVPIRAMQKQGSGPNLSREQIKEIFREHDIDGDGFLDSGEVTRAFGF
        + E   F + YDKN D  ++K+EL   +  NQ        P+ K   V  K QKVP +A +++G+   LSR QIKEIF EHDIDGDG+L   E+T+AF F
Subjt:  QEEVDTFFKKYDKNRDGVITKDEL-FEVPRNQ--------PKGKANKV--KVQKVPIRAMQKQGSGPNLSREQIKEIFREHDIDGDGFLDSGEVTRAFGF

Query:  LGSILPFYKARYGLAYADANGDGRIGEDELDQLVNYAQKLYQK
         GSI+P YKA YGLAYADA+GDG I E+EL++LV+YA++  +K
Subjt:  LGSILPFYKARYGLAYADANGDGRIGEDELDQLVNYAQKLYQK

XP_023002889.1 calmodulin-A-like [Cucurbita maxima]1.9e-2646.21Show/hide
Query:  HH---FRTQEEVDTFFKKYDKNRDGVITKDELFEV---PRNQPKGKANKV--KVQKVPIRAMQKQGSGPNLSREQIKEIFREHDIDGDGFLDSGEVTRAF
        HH   + ++ + +   KKYDKN D ++TKDEL  +     +Q +G    V  K +K P +  + +G    LSR +I++IF EHDIDGDG+L+  E+T+AF
Subjt:  HH---FRTQEEVDTFFKKYDKNRDGVITKDELFEV---PRNQPKGKANKV--KVQKVPIRAMQKQGSGPNLSREQIKEIFREHDIDGDGFLDSGEVTRAF

Query:  GFLGSILPFYKARYGLAYADANGDGRIGEDELDQLVNYAQKLYQK
         F+GS+LP YKA YGL YADA+GDGRI E+EL +LV+YA+++ ++
Subjt:  GFLGSILPFYKARYGLAYADANGDGRIGEDELDQLVNYAQKLYQK

TrEMBL top hitse value%identityAlignment
A0A6J1CSH1 probable calcium-binding protein CML156.9e-2754.62Show/hide
Query:  QEEVDTFFKKYDKNRDGVITKDELFEVPRNQPKGKANKV-KVQKVPIR-AMQKQGSGPNLSREQIKEIFREHDIDGDGFLDSGEVTRAFGFLGSILPFYK
        + E     +KYDKN D +ITK+E+ +   N    KAN V K QKVP R A +K+      SR QIKEIF EHDIDGDG L   E+ +AF FLGS++P YK
Subjt:  QEEVDTFFKKYDKNRDGVITKDELFEVPRNQPKGKANKV-KVQKVPIR-AMQKQGSGPNLSREQIKEIFREHDIDGDGFLDSGEVTRAFGFLGSILPFYK

Query:  ARYGLAYADANGDGRIGEDELDQLVNYAQK
        A YGLA+AD +GDG I E+ELD+LV+YA+K
Subjt:  ARYGLAYADANGDGRIGEDELDQLVNYAQK

A0A6J1GK16 calmodulin-like3.7e-2848.65Show/hide
Query:  HHFRTQEEVDTFFKKYDKNRDGVITKDEL-FEVPRNQ--------PKGKANKV--KVQKVPIRAMQKQGSGPNLSREQIKEIFREHDIDGDGFLDSGEVT
        H    + E     + YDKN D  ++K+EL   +  NQ        P+ K   V  K QKVP +A +++G+   LSR QIKEIF EHDIDGDG+L   E+T
Subjt:  HHFRTQEEVDTFFKKYDKNRDGVITKDEL-FEVPRNQ--------PKGKANKV--KVQKVPIRAMQKQGSGPNLSREQIKEIFREHDIDGDGFLDSGEVT

Query:  RAFGFLGSILPFYKARYGLAYADANGDGRIGEDELDQLVNYAQKLYQK
        +AF F GSI+P YKA YGLAYADA+GDG I E+EL++LV+YA++  +K
Subjt:  RAFGFLGSILPFYKARYGLAYADANGDGRIGEDELDQLVNYAQKLYQK

A0A6J1GK54 calmodulin-like4.1e-2745.52Show/hide
Query:  HH---FRTQEEVDTFFKKYDKNRDGVITKDELF-----EVPRNQPKGKANKVKVQKVPIRAMQKQGSGPNLSREQIKEIFREHDIDGDGFLDSGEVTRAF
        HH   + ++ + +   KKYDKN D ++TKDEL      +  + Q   K    K +K P +  + +G    LSR +I++IF EHDIDGDG+L+  E+T+AF
Subjt:  HH---FRTQEEVDTFFKKYDKNRDGVITKDELF-----EVPRNQPKGKANKVKVQKVPIRAMQKQGSGPNLSREQIKEIFREHDIDGDGFLDSGEVTRAF

Query:  GFLGSILPFYKARYGLAYADANGDGRIGEDELDQLVNYAQKLYQK
         F+GS+LP YKA YGL YADA+GDGRI E+EL++LV+YA+++ ++
Subjt:  GFLGSILPFYKARYGLAYADANGDGRIGEDELDQLVNYAQKLYQK

A0A6J1KRR4 calmodulin-A-like9.0e-2746.21Show/hide
Query:  HH---FRTQEEVDTFFKKYDKNRDGVITKDELFEV---PRNQPKGKANKV--KVQKVPIRAMQKQGSGPNLSREQIKEIFREHDIDGDGFLDSGEVTRAF
        HH   + ++ + +   KKYDKN D ++TKDEL  +     +Q +G    V  K +K P +  + +G    LSR +I++IF EHDIDGDG+L+  E+T+AF
Subjt:  HH---FRTQEEVDTFFKKYDKNRDGVITKDELFEV---PRNQPKGKANKV--KVQKVPIRAMQKQGSGPNLSREQIKEIFREHDIDGDGFLDSGEVTRAF

Query:  GFLGSILPFYKARYGLAYADANGDGRIGEDELDQLVNYAQKLYQK
         F+GS+LP YKA YGL YADA+GDGRI E+EL +LV+YA+++ ++
Subjt:  GFLGSILPFYKARYGLAYADANGDGRIGEDELDQLVNYAQKLYQK

A0A6J1KUW2 calmodulin-like1.3e-2850.35Show/hide
Query:  QEEVDTFFKKYDKNRDGVITKDEL-FEVPRNQ--------PKGKANKV--KVQKVPIRAMQKQGSGPNLSREQIKEIFREHDIDGDGFLDSGEVTRAFGF
        + E   F + YDKN D  ++K+EL   +  NQ        P+ K   V  K QKVP +A +++G+   LSR QIKEIF EHDIDGDG+L   E+T+AF F
Subjt:  QEEVDTFFKKYDKNRDGVITKDEL-FEVPRNQ--------PKGKANKV--KVQKVPIRAMQKQGSGPNLSREQIKEIFREHDIDGDGFLDSGEVTRAFGF

Query:  LGSILPFYKARYGLAYADANGDGRIGEDELDQLVNYAQKLYQK
         GSI+P YKA YGLAYADA+GDG I E+EL++LV+YA++  +K
Subjt:  LGSILPFYKARYGLAYADANGDGRIGEDELDQLVNYAQKLYQK

SwissProt top hitse value%identityAlignment
P11118 Calmodulin4.2e-0529.37Show/hide
Query:  TQEEVDTF---FKKYDKNRDGVITKDELFEVPRNQPKGKANKVKVQKVPIRAMQKQGSG----PNL------------SREQIKEIFREHDIDGDGFLDS
        T E++  F   F  +DK+ DG IT  EL  V R+  +    + ++Q + I  + + GSG    P              + E+IKE FR  D DG+GF+ +
Subjt:  TQEEVDTF---FKKYDKNRDGVITKDELFEVPRNQPKGKANKVKVQKVPIRAMQKQGSG----PNL------------SREQIKEIFREHDIDGDGFLDS

Query:  GEVTRAFGFLGSILPFYKARYGLAYADANGDGRIGEDELDQLV
         E+      LG  L   +    +  AD +GDG+I  +E  +++
Subjt:  GEVTRAFGFLGSILPFYKARYGLAYADANGDGRIGEDELDQLV

P18061 Calmodulin3.2e-0528.67Show/hide
Query:  TQEEVDTF---FKKYDKNRDGVITKDELFEVPRNQPKGKANKVKVQKVPIRAMQKQGSG----------------PNLSREQIKEIFREHDIDGDGFLDS
        + E++  F   F  +DK+ DG IT  EL  V R+  +    + ++Q + I  + + GSG                 + S E+IKE FR  D DG+GF+ +
Subjt:  TQEEVDTF---FKKYDKNRDGVITKDELFEVPRNQPKGKANKVKVQKVPIRAMQKQGSG----------------PNLSREQIKEIFREHDIDGDGFLDS

Query:  GEVTRAFGFLGSILPFYKARYGLAYADANGDGRIGEDELDQLV
         E+      LG  L   +    +  AD +GDG+I  +E  +++
Subjt:  GEVTRAFGFLGSILPFYKARYGLAYADANGDGRIGEDELDQLV

P69097 Calmodulin4.2e-0528.67Show/hide
Query:  TQEEVDTF---FKKYDKNRDGVITKDELFEVPRNQPKGKANKVKVQKVPIRAMQKQGSG----------------PNLSREQIKEIFREHDIDGDGFLDS
        + E++  F   F  +DK+ DG IT  EL  V R+  +    + ++Q + I  + + GSG                 + S E+IKE FR  D DG+GF+ +
Subjt:  TQEEVDTF---FKKYDKNRDGVITKDELFEVPRNQPKGKANKVKVQKVPIRAMQKQGSG----------------PNLSREQIKEIFREHDIDGDGFLDS

Query:  GEVTRAFGFLGSILPFYKARYGLAYADANGDGRIGEDELDQLV
         E+      LG  L   +    +  AD +GDG+I  +E  +++
Subjt:  GEVTRAFGFLGSILPFYKARYGLAYADANGDGRIGEDELDQLV

P69098 Calmodulin4.2e-0528.67Show/hide
Query:  TQEEVDTF---FKKYDKNRDGVITKDELFEVPRNQPKGKANKVKVQKVPIRAMQKQGSG----------------PNLSREQIKEIFREHDIDGDGFLDS
        + E++  F   F  +DK+ DG IT  EL  V R+  +    + ++Q + I  + + GSG                 + S E+IKE FR  D DG+GF+ +
Subjt:  TQEEVDTF---FKKYDKNRDGVITKDELFEVPRNQPKGKANKVKVQKVPIRAMQKQGSG----------------PNLSREQIKEIFREHDIDGDGFLDS

Query:  GEVTRAFGFLGSILPFYKARYGLAYADANGDGRIGEDELDQLV
         E+      LG  L   +    +  AD +GDG+I  +E  +++
Subjt:  GEVTRAFGFLGSILPFYKARYGLAYADANGDGRIGEDELDQLV

Q9C8Y1 Probable calcium-binding protein CML234.2e-0529.46Show/hide
Query:  TQEEVDTFFKKYDKNRDGVITKDELFEVPRNQPKGKANKVKVQKVPIRAMQKQGSGPNLSREQIKEIFREHDIDGDGFLDSGEVTRAFGFL-----GSIL
        + E++   F+++DKN DG I+ DEL +V                  I A+      PN S+E+ K + +E D+DG+GF+D  E    F         S +
Subjt:  TQEEVDTFFKKYDKNRDGVITKDELFEVPRNQPKGKANKVKVQKVPIRAMQKQGSGPNLSREQIKEIFREHDIDGDGFLDSGEVTRAFGFL-----GSIL

Query:  PFYKARYGLAYADANGDGRIGEDELDQLV
           K  + L   D N  GRI  +EL  ++
Subjt:  PFYKARYGLAYADANGDGRIGEDELDQLV

Arabidopsis top hitse value%identityAlignment
AT1G32250.1 Calcium-binding EF-hand family protein3.9e-0626.39Show/hide
Query:  EVDTFFKKYDKNRDGVITKDEL---------------FEVPRNQPKGKANKVK-----VQKVPIRAMQKQGSGPNLSREQIKEIFREHDIDGDGFLDSGE
        E+   F+ +D+N+DG +T+ EL               FE   ++   K+N +      V  V    +         + EQ+  +FR  D DG+GF+ + E
Subjt:  EVDTFFKKYDKNRDGVITKDEL---------------FEVPRNQPKGKANKVK-----VQKVPIRAMQKQGSGPNLSREQIKEIFREHDIDGDGFLDSGE

Query:  VTRAFGFLGSILPFYKARYGLAYADANGDGRIGEDELDQLVNYA
        +  +   LG  L   +    +  AD++GDGRI   E  + +N A
Subjt:  VTRAFGFLGSILPFYKARYGLAYADANGDGRIGEDELDQLVNYA

AT1G66400.1 calmodulin like 233.0e-0629.46Show/hide
Query:  TQEEVDTFFKKYDKNRDGVITKDELFEVPRNQPKGKANKVKVQKVPIRAMQKQGSGPNLSREQIKEIFREHDIDGDGFLDSGEVTRAFGFL-----GSIL
        + E++   F+++DKN DG I+ DEL +V                  I A+      PN S+E+ K + +E D+DG+GF+D  E    F         S +
Subjt:  TQEEVDTFFKKYDKNRDGVITKDELFEVPRNQPKGKANKVKVQKVPIRAMQKQGSGPNLSREQIKEIFREHDIDGDGFLDSGEVTRAFGFL-----GSIL

Query:  PFYKARYGLAYADANGDGRIGEDELDQLV
           K  + L   D N  GRI  +EL  ++
Subjt:  PFYKARYGLAYADANGDGRIGEDELDQLV

AT1G66410.1 calmodulin 41.9e-0528.67Show/hide
Query:  TQEEVDTF---FKKYDKNRDGVITKDELFEVPRNQPKGKANKVKVQKVPIRAMQKQGSGP-------NL---------SREQIKEIFREHDIDGDGFLDS
        T E++  F   F  +DK+ DG IT  EL  V R+  +    + ++Q + I  +   G+G        NL         S E++KE FR  D D +GF+ +
Subjt:  TQEEVDTF---FKKYDKNRDGVITKDELFEVPRNQPKGKANKVKVQKVPIRAMQKQGSGP-------NL---------SREQIKEIFREHDIDGDGFLDS

Query:  GEVTRAFGFLGSILPFYKARYGLAYADANGDGRIGEDELDQLV
         E+      LG  L   +    +  AD +GDG+I  +E  +++
Subjt:  GEVTRAFGFLGSILPFYKARYGLAYADANGDGRIGEDELDQLV

AT3G51920.1 calmodulin 91.9e-0524.11Show/hide
Query:  TQEEVDTFFKKY---DKNRDGVITKDELFEVPRN---QPKGKANKVKVQKVPIRA-----------MQKQGSGPNLSREQIKEIFREHDIDGDGFLDSGE
        T E++  F++ +   DK+ DG ITK++L +V ++    PK +  +  +  V I             +  Q +    + +++ E+FR  D DGDG +   E
Subjt:  TQEEVDTFFKKY---DKNRDGVITKDELFEVPRN---QPKGKANKVKVQKVPIRA-----------MQKQGSGPNLSREQIKEIFREHDIDGDGFLDSGE

Query:  VTRAFGFLGSILPFYKARYGLAYADANGDGRIGEDELDQLV
        +      +G  +   +A + +  AD +GDG +   E  +++
Subjt:  VTRAFGFLGSILPFYKARYGLAYADANGDGRIGEDELDQLV

AT5G37780.1 calmodulin 11.9e-0528.67Show/hide
Query:  TQEEVDTF---FKKYDKNRDGVITKDELFEVPRNQPKGKANKVKVQKVPIRAMQKQGSGP-------NL---------SREQIKEIFREHDIDGDGFLDS
        T E++  F   F  +DK+ DG IT  EL  V R+  +    + ++Q + I  +   G+G        NL         S E++KE FR  D D +GF+ +
Subjt:  TQEEVDTF---FKKYDKNRDGVITKDELFEVPRNQPKGKANKVKVQKVPIRAMQKQGSGP-------NL---------SREQIKEIFREHDIDGDGFLDS

Query:  GEVTRAFGFLGSILPFYKARYGLAYADANGDGRIGEDELDQLV
         E+      LG  L   +    +  AD +GDG+I  +E  +++
Subjt:  GEVTRAFGFLGSILPFYKARYGLAYADANGDGRIGEDELDQLV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCATCTGCCAACATCATTTTCGAACTCAAGAAGAAGTAGACACTTTTTTCAAGAAATACGATAAAAACCGCGACGGTGTTATCACTAAAGACGAGCTGTTTGAAGT
GCCAAGAAACCAACCAAAAGGCAAAGCCAACAAAGTTAAAGTCCAAAAAGTGCCAATAAGAGCTATGCAGAAGCAGGGATCGGGTCCGAATCTAAGTCGAGAACAGATTA
AGGAGATTTTTAGAGAGCACGATATAGACGGAGATGGTTTCCTAGACTCTGGAGAGGTAACAAGAGCATTTGGTTTCTTAGGTTCGATTCTTCCATTTTACAAGGCACGT
TATGGCCTGGCCTATGCGGATGCTAACGGAGATGGGCGCATCGGTGAGGATGAGCTTGACCAACTCGTCAACTATGCTCAAAAGCTTTACCAGAAGTGA
mRNA sequenceShow/hide mRNA sequence
CAAAATATCACATCTAAAATAAACAAAACCAAACCCTTCTTTTTCTTGAACAATGGCCATCTGCCAACATCATTTTCGAACTCAAGAAGAAGTAGACACTTTTTTCAAGA
AATACGATAAAAACCGCGACGGTGTTATCACTAAAGACGAGCTGTTTGAAGTGCCAAGAAACCAACCAAAAGGCAAAGCCAACAAAGTTAAAGTCCAAAAAGTGCCAATA
AGAGCTATGCAGAAGCAGGGATCGGGTCCGAATCTAAGTCGAGAACAGATTAAGGAGATTTTTAGAGAGCACGATATAGACGGAGATGGTTTCCTAGACTCTGGAGAGGT
AACAAGAGCATTTGGTTTCTTAGGTTCGATTCTTCCATTTTACAAGGCACGTTATGGCCTGGCCTATGCGGATGCTAACGGAGATGGGCGCATCGGTGAGGATGAGCTTG
ACCAACTCGTCAACTATGCTCAAAAGCTTTACCAGAAGTGAGTTCATAAGTTATAAGTGAAATTCCAGTTATGAAAAAAAAGAGGCTGGTTTTAGCACCTTATATTATGG
TATGGTGGAATAAATGAAATGATATTTCATAAATAATTATTTATGTTTTTTACTCAAAAAA
Protein sequenceShow/hide protein sequence
MAICQHHFRTQEEVDTFFKKYDKNRDGVITKDELFEVPRNQPKGKANKVKVQKVPIRAMQKQGSGPNLSREQIKEIFREHDIDGDGFLDSGEVTRAFGFLGSILPFYKAR
YGLAYADANGDGRIGEDELDQLVNYAQKLYQK