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Sed0027218 (gene) of Chayote v1 genome

Gene IDSed0027218
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG13:6641549..6642285
RNA-Seq ExpressionSed0027218
SyntenySed0027218
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6600670.1 hypothetical protein SDJN03_05903, partial [Cucurbita argyrosperma subsp. sororia]2.2e-3854.92Show/hide
Query:  MKPTTIAA--------RPDPKSLKSS-------HKPGVDRIRDRDLP----------------------------AAEKLELLKALRLSQTRAREAERRA
        MK +TIAA        + +P++L S+       +KPGVD IR+ DLP                              EKLELLKALRLSQTRAREAER+A
Subjt:  MKPTTIAA--------RPDPKSLKSS-------HKPGVDRIRDRDLP----------------------------AAEKLELLKALRLSQTRAREAERRA

Query:  AKLMEERDCMSRAFQDEARLIFCYRQSLKLLELRVSNLQKGKHEDDEDDDGDGG---GIKWAWALAICFSVVGVGFFLGFT-SNVDHDLFVAN
        AKLMEERDC+SRAF+DEARLIFCYRQSLKL+ELRVS L+K K E++++ +G+G    G+KW WALAIC SVVGVG  LG+T SNVD D FV N
Subjt:  AKLMEERDCMSRAFQDEARLIFCYRQSLKLLELRVSNLQKGKHEDDEDDDGDGG---GIKWAWALAICFSVVGVGFFLGFT-SNVDHDLFVAN

KAG7031309.1 hypothetical protein SDJN02_05349, partial [Cucurbita argyrosperma subsp. argyrosperma]1.4e-3756.02Show/hide
Query:  MKPTTIAA--------RPDPKSLKSS-------HKPGVDRIRDRDLP----------------------------AAEKLELLKALRLSQTRAREAERRA
        MK +TIAA        + +P++L S+       +KPGVD IR+ DLP                              EKLELLKALRLSQTRAREAER+A
Subjt:  MKPTTIAA--------RPDPKSLKSS-------HKPGVDRIRDRDLP----------------------------AAEKLELLKALRLSQTRAREAERRA

Query:  AKLMEERDCMSRAFQDEARLIFCYRQSLKLLELRVSNLQKGKHEDDEDDDGDGG-GIKWAWALAICFSVVGVGFFLGFT-SNVDHDLFVAN
        AKLMEERDC+SRAF+DEARLIFCYRQSLKL+ELRVS L+K K E  E+D+G+G  G+KW WALAIC SVVGVG  LG+T SN D D FV N
Subjt:  AKLMEERDCMSRAFQDEARLIFCYRQSLKLLELRVSNLQKGKHEDDEDDDGDGG-GIKWAWALAICFSVVGVGFFLGFT-SNVDHDLFVAN

XP_022136673.1 uncharacterized protein LOC111008325 [Momordica charantia]4.6e-3659.26Show/hide
Query:  LKSSHKPGVDRIRDRDLP------------------------AAEKLELLKALRLSQTRAREAERRAAKLMEERDCMSRAFQDEARLIFCYRQSLKLLEL
        L+ SHKPGVD IR+ DLP                          EKLELLKALRLSQTRAREAER+AAKLMEERDC+SRAF+DEARLIF YRQS+KLL+L
Subjt:  LKSSHKPGVDRIRDRDLP------------------------AAEKLELLKALRLSQTRAREAERRAAKLMEERDCMSRAFQDEARLIFCYRQSLKLLEL

Query:  RVSNLQKGKHEDDEDDDGD---------GGG--IKWAWALAICFSVVGVGFFLGFTSNVDHD
        R+SNLQK   E++   +GD         GGG  +KW WALAICF+VVGVGF  G+T NVD D
Subjt:  RVSNLQKGKHEDDEDDDGD---------GGG--IKWAWALAICFSVVGVGFFLGFTSNVDHD

XP_022943244.1 uncharacterized protein LOC111448032 [Cucurbita moschata]1.0e-3554.97Show/hide
Query:  MKPTTIAA--------RPDPKSLKSS-------HKPGVDRIRDRDLP----------------------------AAEKLELLKALRLSQTRAREAERRA
        MK +TIA         + +P++L S+       +KP VD IR+ DLP                              EKLELLKALRLSQTRAREAER+A
Subjt:  MKPTTIAA--------RPDPKSLKSS-------HKPGVDRIRDRDLP----------------------------AAEKLELLKALRLSQTRAREAERRA

Query:  AKLMEERDCMSRAFQDEARLIFCYRQSLKLLELRVSNLQKGKHEDDEDDDGDGG-GIKWAWALAICFSVVGVGFFLGFT-SNVDHDLFVAN
        AKLMEERDC+SRAF+DEARLIFCYRQSLKL+ELRVS L+K K E  E+D+G+G  G+KW WALAIC SVVGVG  LG+T SNV  D FV N
Subjt:  AKLMEERDCMSRAFQDEARLIFCYRQSLKLLELRVSNLQKGKHEDDEDDDGDGG-GIKWAWALAICFSVVGVGFFLGFT-SNVDHDLFVAN

XP_022970087.1 uncharacterized protein LOC111469054 [Cucurbita maxima]3.8e-3865.28Show/hide
Query:  PDPKSLKSSHKPGVDRIRDR---DLPAA---EKLELLKALRLSQTRAREAERRAAKLMEERDCMSRAFQDEARLIFCYRQSLKLLELRVSNLQKGKHEDD
        P P+ L ++   G    R R   ++ A    EKLELLKALRLSQTRAREAER+AAKLMEERDC+SRAF+DEARLIFCYRQSLKL+ELRVS L+K K E++
Subjt:  PDPKSLKSSHKPGVDRIRDR---DLPAA---EKLELLKALRLSQTRAREAERRAAKLMEERDCMSRAFQDEARLIFCYRQSLKLLELRVSNLQKGKHEDD

Query:  EDDDGDGGGIKWAWALAICFSVVGVGFFLGFT-SNVDHDLFVAN
        ++ +G+GGG+KW WALAIC SVVGVG  LG+  SNVD D FV N
Subjt:  EDDDGDGGGIKWAWALAICFSVVGVGFFLGFT-SNVDHDLFVAN

TrEMBL top hitse value%identityAlignment
A0A1S3C2P7 uncharacterized protein LOC1034957941.9e-3559.74Show/hide
Query:  MKPTTIAARPDPKSLKSSHKPGVDRIRDRDLP---------AAEKLELLKALRLSQTRAREAERRAAKLMEERDCMSRAFQDEARLIFCYRQSLKLLELR
        MK  T   R    S     + GV+ IR+ DLP           EK+ELLKALRLSQTRAREAER+AAKLMEERDC+SRAF+DEARL+FCYRQSLKLLELR
Subjt:  MKPTTIAARPDPKSLKSSHKPGVDRIRDRDLP---------AAEKLELLKALRLSQTRAREAERRAAKLMEERDCMSRAFQDEARLIFCYRQSLKLLELR

Query:  VSNLQK--------GKHEDDEDDDGDGGGIKWAWALAICFSVVGVGFFLGFTSN
        V  LQK         + E++ D++G  GG+KW WALAIC SVVGVGF LG+T N
Subjt:  VSNLQK--------GKHEDDEDDDGDGGGIKWAWALAICFSVVGVGFFLGFTSN

A0A5D3BEN7 Uncharacterized protein1.9e-3559.74Show/hide
Query:  MKPTTIAARPDPKSLKSSHKPGVDRIRDRDLP---------AAEKLELLKALRLSQTRAREAERRAAKLMEERDCMSRAFQDEARLIFCYRQSLKLLELR
        MK  T   R    S     + GV+ IR+ DLP           EK+ELLKALRLSQTRAREAER+AAKLMEERDC+SRAF+DEARL+FCYRQSLKLLELR
Subjt:  MKPTTIAARPDPKSLKSSHKPGVDRIRDRDLP---------AAEKLELLKALRLSQTRAREAERRAAKLMEERDCMSRAFQDEARLIFCYRQSLKLLELR

Query:  VSNLQK--------GKHEDDEDDDGDGGGIKWAWALAICFSVVGVGFFLGFTSN
        V  LQK         + E++ D++G  GG+KW WALAIC SVVGVGF LG+T N
Subjt:  VSNLQK--------GKHEDDEDDDGDGGGIKWAWALAICFSVVGVGFFLGFTSN

A0A6J1C873 uncharacterized protein LOC1110083252.2e-3659.26Show/hide
Query:  LKSSHKPGVDRIRDRDLP------------------------AAEKLELLKALRLSQTRAREAERRAAKLMEERDCMSRAFQDEARLIFCYRQSLKLLEL
        L+ SHKPGVD IR+ DLP                          EKLELLKALRLSQTRAREAER+AAKLMEERDC+SRAF+DEARLIF YRQS+KLL+L
Subjt:  LKSSHKPGVDRIRDRDLP------------------------AAEKLELLKALRLSQTRAREAERRAAKLMEERDCMSRAFQDEARLIFCYRQSLKLLEL

Query:  RVSNLQKGKHEDDEDDDGD---------GGG--IKWAWALAICFSVVGVGFFLGFTSNVDHD
        R+SNLQK   E++   +GD         GGG  +KW WALAICF+VVGVGF  G+T NVD D
Subjt:  RVSNLQKGKHEDDEDDDGD---------GGG--IKWAWALAICFSVVGVGFFLGFTSNVDHD

A0A6J1FTQ9 uncharacterized protein LOC1114480324.9e-3654.97Show/hide
Query:  MKPTTIAA--------RPDPKSLKSS-------HKPGVDRIRDRDLP----------------------------AAEKLELLKALRLSQTRAREAERRA
        MK +TIA         + +P++L S+       +KP VD IR+ DLP                              EKLELLKALRLSQTRAREAER+A
Subjt:  MKPTTIAA--------RPDPKSLKSS-------HKPGVDRIRDRDLP----------------------------AAEKLELLKALRLSQTRAREAERRA

Query:  AKLMEERDCMSRAFQDEARLIFCYRQSLKLLELRVSNLQKGKHEDDEDDDGDGG-GIKWAWALAICFSVVGVGFFLGFT-SNVDHDLFVAN
        AKLMEERDC+SRAF+DEARLIFCYRQSLKL+ELRVS L+K K E  E+D+G+G  G+KW WALAIC SVVGVG  LG+T SNV  D FV N
Subjt:  AKLMEERDCMSRAFQDEARLIFCYRQSLKLLELRVSNLQKGKHEDDEDDDGDGG-GIKWAWALAICFSVVGVGFFLGFT-SNVDHDLFVAN

A0A6J1HY55 uncharacterized protein LOC1114690541.8e-3865.28Show/hide
Query:  PDPKSLKSSHKPGVDRIRDR---DLPAA---EKLELLKALRLSQTRAREAERRAAKLMEERDCMSRAFQDEARLIFCYRQSLKLLELRVSNLQKGKHEDD
        P P+ L ++   G    R R   ++ A    EKLELLKALRLSQTRAREAER+AAKLMEERDC+SRAF+DEARLIFCYRQSLKL+ELRVS L+K K E++
Subjt:  PDPKSLKSSHKPGVDRIRDR---DLPAA---EKLELLKALRLSQTRAREAERRAAKLMEERDCMSRAFQDEARLIFCYRQSLKLLELRVSNLQKGKHEDD

Query:  EDDDGDGGGIKWAWALAICFSVVGVGFFLGFT-SNVDHDLFVAN
        ++ +G+GGG+KW WALAIC SVVGVG  LG+  SNVD D FV N
Subjt:  EDDDGDGGGIKWAWALAICFSVVGVGFFLGFT-SNVDHDLFVAN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G01240.1 unknown protein2.5e-0834.53Show/hide
Query:  SLKSSHKPGVDRIRDRDLPAAEKLELLKALRLSQTRAREAERRAAKLMEERDCMSRAFQDEARLIFCYRQSLKLLELRVSNLQKGKHEDDEDD-------
        S +S +   +   R  DL    K +LL+ALR SQTRAREAER A +   E+D +      +A  +  Y+Q LKLLE+    LQ  K E+ E+        
Subjt:  SLKSSHKPGVDRIRDRDLPAAEKLELLKALRLSQTRAREAERRAAKLMEERDCMSRAFQDEARLIFCYRQSLKLLELRVSNLQKGKHEDDEDD-------

Query:  ----------DGDGGGIKWAWALAICFSVVGVGFFLGFT
                   G+ G  ++  A A+ FS++G G  LG+T
Subjt:  ----------DGDGGGIKWAWALAICFSVVGVGFFLGFT

AT1G01240.2 unknown protein2.5e-0834.53Show/hide
Query:  SLKSSHKPGVDRIRDRDLPAAEKLELLKALRLSQTRAREAERRAAKLMEERDCMSRAFQDEARLIFCYRQSLKLLELRVSNLQKGKHEDDEDD-------
        S +S +   +   R  DL    K +LL+ALR SQTRAREAER A +   E+D +      +A  +  Y+Q LKLLE+    LQ  K E+ E+        
Subjt:  SLKSSHKPGVDRIRDRDLPAAEKLELLKALRLSQTRAREAERRAAKLMEERDCMSRAFQDEARLIFCYRQSLKLLELRVSNLQKGKHEDDEDD-------

Query:  ----------DGDGGGIKWAWALAICFSVVGVGFFLGFT
                   G+ G  ++  A A+ FS++G G  LG+T
Subjt:  ----------DGDGGGIKWAWALAICFSVVGVGFFLGFT

AT1G01240.3 unknown protein2.5e-0834.53Show/hide
Query:  SLKSSHKPGVDRIRDRDLPAAEKLELLKALRLSQTRAREAERRAAKLMEERDCMSRAFQDEARLIFCYRQSLKLLELRVSNLQKGKHEDDEDD-------
        S +S +   +   R  DL    K +LL+ALR SQTRAREAER A +   E+D +      +A  +  Y+Q LKLLE+    LQ  K E+ E+        
Subjt:  SLKSSHKPGVDRIRDRDLPAAEKLELLKALRLSQTRAREAERRAAKLMEERDCMSRAFQDEARLIFCYRQSLKLLELRVSNLQKGKHEDDEDD-------

Query:  ----------DGDGGGIKWAWALAICFSVVGVGFFLGFT
                   G+ G  ++  A A+ FS++G G  LG+T
Subjt:  ----------DGDGGGIKWAWALAICFSVVGVGFFLGFT

AT2G46550.1 unknown protein3.3e-0835.71Show/hide
Query:  KLELLKALRLSQTRAREAERRAAKLMEERDCMSRAFQDEARLIFCYRQSLKLLELRVSNLQ-KGKHEDDEDDDGDG------------------------
        K ELL+ALR SQTRAREAE  A +   E++ + +    +A  +F Y+Q L+LL+L    LQ K K  D++++D  G                        
Subjt:  KLELLKALRLSQTRAREAERRAAKLMEERDCMSRAFQDEARLIFCYRQSLKLLELRVSNLQ-KGKHEDDEDDDGDG------------------------

Query:  -GGIKWAWALAICFSVVGVGFFLGFT
          G K+A  LA+  S+VG G  LG+T
Subjt:  -GGIKWAWALAICFSVVGVGFFLGFT

AT2G46550.2 unknown protein3.3e-0835.71Show/hide
Query:  KLELLKALRLSQTRAREAERRAAKLMEERDCMSRAFQDEARLIFCYRQSLKLLELRVSNLQ-KGKHEDDEDDDGDG------------------------
        K ELL+ALR SQTRAREAE  A +   E++ + +    +A  +F Y+Q L+LL+L    LQ K K  D++++D  G                        
Subjt:  KLELLKALRLSQTRAREAERRAAKLMEERDCMSRAFQDEARLIFCYRQSLKLLELRVSNLQ-KGKHEDDEDDDGDG------------------------

Query:  -GGIKWAWALAICFSVVGVGFFLGFT
          G K+A  LA+  S+VG G  LG+T
Subjt:  -GGIKWAWALAICFSVVGVGFFLGFT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGCCGACGACGATCGCCGCCCGGCCAGATCCCAAATCCCTCAAATCCTCTCACAAACCCGGCGTTGACCGAATCCGAGATCGCGATCTCCCGGCGGCGGAGAAATT
GGAGCTGCTGAAGGCGCTGAGGCTGTCGCAGACGAGGGCGAGAGAGGCGGAGAGGAGGGCGGCGAAATTGATGGAGGAGAGGGATTGTATGAGTCGGGCCTTTCAAGATG
AGGCGAGATTGATCTTCTGTTACAGACAGTCGTTGAAATTGTTGGAACTTAGGGTTTCCAATTTGCAGAAGGGGAAACATGAAGATGATGAAGATGATGATGGCGATGGG
GGAGGGATCAAATGGGCTTGGGCTTTGGCCATTTGTTTTAGCGTTGTGGGAGTGGGCTTTTTCTTGGGCTTTACTTCTAATGTTGATCATGATTTGTTTGTTGCCAATCT
ATGA
mRNA sequenceShow/hide mRNA sequence
CAAAAAAATAAATAAACGGCAAAGTTTATCAAAAGCCGCAAGCAAAGAATTCTTACCCAATCAACAAATAAATACTCTTGTTTCCATTTTTCAGTTTATCATTTTCCTCT
CCAAAAATCCAATCCCGATCGCACCGCCGCCGCGACCATGAAGCCGACGACGATCGCCGCCCGGCCAGATCCCAAATCCCTCAAATCCTCTCACAAACCCGGCGTTGACC
GAATCCGAGATCGCGATCTCCCGGCGGCGGAGAAATTGGAGCTGCTGAAGGCGCTGAGGCTGTCGCAGACGAGGGCGAGAGAGGCGGAGAGGAGGGCGGCGAAATTGATG
GAGGAGAGGGATTGTATGAGTCGGGCCTTTCAAGATGAGGCGAGATTGATCTTCTGTTACAGACAGTCGTTGAAATTGTTGGAACTTAGGGTTTCCAATTTGCAGAAGGG
GAAACATGAAGATGATGAAGATGATGATGGCGATGGGGGAGGGATCAAATGGGCTTGGGCTTTGGCCATTTGTTTTAGCGTTGTGGGAGTGGGCTTTTTCTTGGGCTTTA
CTTCTAATGTTGATCATGATTTGTTTGTTGCCAATCTATGACTCTTTTACCTTTTTCCCCTTTCCCAAATTTTGTTTTGTTTATAAAAAATATGAATTTAAAATTCACAC
TTGTCTTTTGTCTTGGATGTGGAGATTGGAATATCTATCAACTCAATTAGATTGATGTAACATCATTTGACATTTTA
Protein sequenceShow/hide protein sequence
MKPTTIAARPDPKSLKSSHKPGVDRIRDRDLPAAEKLELLKALRLSQTRAREAERRAAKLMEERDCMSRAFQDEARLIFCYRQSLKLLELRVSNLQKGKHEDDEDDDGDG
GGIKWAWALAICFSVVGVGFFLGFTSNVDHDLFVANL