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Sed0027279 (gene) of Chayote v1 genome

Gene IDSed0027279
OrganismSechium edule (Chayote v1)
DescriptionEpidermal patterning factor-like protein
Genome locationLG04:29928114..29929446
RNA-Seq ExpressionSed0027279
SyntenySed0027279
Gene Ontology termsGO:0010052 - guard cell differentiation (biological process)
GO:0110165 - cellular anatomical structure (cellular component)
InterPro domainsIPR039455 - EPIDERMAL PATTERNING FACTOR-like protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022948421.1 EPIDERMAL PATTERNING FACTOR-like protein 4 isoform X1 [Cucurbita moschata]9.0e-3162.59Show/hide
Query:  FFFLFFSFILLSLFYRSGSSSTSSAGSDNSCSSV----HTNV---------LLPADERSAALPIRAE-AMGDH---ELR-LERRELGGPGSSPPRCESKC
        F FLF   IL+S       S  SSAG DN C S     HTN+          LPAD R  A P  AE  +GDH   ELR L RRELGGPGSSPPRC S C
Subjt:  FFFLFFSFILLSLFYRSGSSSTSSAGSDNSCSSV----HTNV---------LLPADERSAALPIRAE-AMGDH---ELR-LERRELGGPGSSPPRCESKC

Query:  GKCTPCKAVHVAVRPGTPVTAEYYPEAWRCKCGNKLYMP
        GKCTPC AVHV V PGTPVTAEYYPEAWRCKCGNKLYMP
Subjt:  GKCTPCKAVHVAVRPGTPVTAEYYPEAWRCKCGNKLYMP

XP_022948422.1 EPIDERMAL PATTERNING FACTOR-like protein 4 isoform X2 [Cucurbita moschata]1.2e-3062.41Show/hide
Query:  FSFILLSLFYRSGSSSTSSAGSDNSCSSV---HTNV---------LLPADERSAALPIRAE-AMGDH---ELR-LERRELGGPGSSPPRCESKCGKCTPC
        FSF+ L L   S S S  S+  +  CSS    HTN+          LPAD R  A P  AE  +GDH   ELR L RRELGGPGSSPPRC S CGKCTPC
Subjt:  FSFILLSLFYRSGSSSTSSAGSDNSCSSV---HTNV---------LLPADERSAALPIRAE-AMGDH---ELR-LERRELGGPGSSPPRCESKCGKCTPC

Query:  KAVHVAVRPGTPVTAEYYPEAWRCKCGNKLYMP
         AVHV V PGTPVTAEYYPEAWRCKCGNKLYMP
Subjt:  KAVHVAVRPGTPVTAEYYPEAWRCKCGNKLYMP

XP_022997734.1 EPIDERMAL PATTERNING FACTOR-like protein 4 isoform X1 [Cucurbita maxima]1.5e-3062.59Show/hide
Query:  FFFLFFSFILLSLFYRSGSSSTSSAGSDNSCSSV----HTNV---------LLPADERSAALPIRAE-AMGDH---ELR-LERRELGGPGSSPPRCESKC
        F FLF   IL+S       S  SSAG DN C S     HTN+          LPAD R  A P  AE  +GDH   ELR L RRELGGPGSSPPRC S C
Subjt:  FFFLFFSFILLSLFYRSGSSSTSSAGSDNSCSSV----HTNV---------LLPADERSAALPIRAE-AMGDH---ELR-LERRELGGPGSSPPRCESKC

Query:  GKCTPCKAVHVAVRPGTPVTAEYYPEAWRCKCGNKLYMP
        GKCTPC AVHV V PGTPVTAEYYPEAWRCKCGNKLYMP
Subjt:  GKCTPCKAVHVAVRPGTPVTAEYYPEAWRCKCGNKLYMP

XP_023525345.1 EPIDERMAL PATTERNING FACTOR-like protein 4 isoform X1 [Cucurbita pepo subsp. pepo]1.8e-3164.44Show/hide
Query:  FSFILLSLFYRS-GSSSTSSAGSDNSCSSV----HTNV---------LLPADERSAALPIRAE-AMGDH---ELR-LERRELGGPGSSPPRCESKCGKCT
        FSF+ L LF  S   S  SSAG DN C S     HTN+          LPAD R  A P  AE  +GDH   ELR L RRELGGPGSSPPRC S CGKCT
Subjt:  FSFILLSLFYRS-GSSSTSSAGSDNSCSSV----HTNV---------LLPADERSAALPIRAE-AMGDH---ELR-LERRELGGPGSSPPRCESKCGKCT

Query:  PCKAVHVAVRPGTPVTAEYYPEAWRCKCGNKLYMP
        PC AVHV V PGTPVTAEYYPEAWRCKCGNKLYMP
Subjt:  PCKAVHVAVRPGTPVTAEYYPEAWRCKCGNKLYMP

XP_023525346.1 EPIDERMAL PATTERNING FACTOR-like protein 4 isoform X2 [Cucurbita pepo subsp. pepo]1.5e-3062.41Show/hide
Query:  FSFILLSLFYRSGSSSTSSAGSDNSCSSV---HTNV---------LLPADERSAALPIRAE-AMGDH---ELR-LERRELGGPGSSPPRCESKCGKCTPC
        FSF+ L LF  S   S  S+  +  CSS    HTN+          LPAD R  A P  AE  +GDH   ELR L RRELGGPGSSPPRC S CGKCTPC
Subjt:  FSFILLSLFYRSGSSSTSSAGSDNSCSSV---HTNV---------LLPADERSAALPIRAE-AMGDH---ELR-LERRELGGPGSSPPRCESKCGKCTPC

Query:  KAVHVAVRPGTPVTAEYYPEAWRCKCGNKLYMP
         AVHV V PGTPVTAEYYPEAWRCKCGNKLYMP
Subjt:  KAVHVAVRPGTPVTAEYYPEAWRCKCGNKLYMP

TrEMBL top hitse value%identityAlignment
A0A2P5XX40 Epidermal patterning factor-like protein6.5e-2763.27Show/hide
Query:  SDNSCSSVHTNVLLP---ADERSAALPIRAEAMGDHELRLERRELGGPGSSPPRCESKCGKCTPCKAVHVAVRPGTPVTAEYYPEAWRCKCGNKLYMP
        +D  CS V T + L    A E   ++P+  +    H   L RR L GPGSSPPRC SKCGKCTPCK VHV V PGTPVTAEYYPEAWRCKCGNKLYMP
Subjt:  SDNSCSSVHTNVLLP---ADERSAALPIRAEAMGDHELRLERRELGGPGSSPPRCESKCGKCTPCKAVHVAVRPGTPVTAEYYPEAWRCKCGNKLYMP

A0A6J1G961 Epidermal patterning factor-like protein4.4e-3162.59Show/hide
Query:  FFFLFFSFILLSLFYRSGSSSTSSAGSDNSCSSV----HTNV---------LLPADERSAALPIRAE-AMGDH---ELR-LERRELGGPGSSPPRCESKC
        F FLF   IL+S       S  SSAG DN C S     HTN+          LPAD R  A P  AE  +GDH   ELR L RRELGGPGSSPPRC S C
Subjt:  FFFLFFSFILLSLFYRSGSSSTSSAGSDNSCSSV----HTNV---------LLPADERSAALPIRAE-AMGDH---ELR-LERRELGGPGSSPPRCESKC

Query:  GKCTPCKAVHVAVRPGTPVTAEYYPEAWRCKCGNKLYMP
        GKCTPC AVHV V PGTPVTAEYYPEAWRCKCGNKLYMP
Subjt:  GKCTPCKAVHVAVRPGTPVTAEYYPEAWRCKCGNKLYMP

A0A6J1G964 Epidermal patterning factor-like protein5.7e-3162.41Show/hide
Query:  FSFILLSLFYRSGSSSTSSAGSDNSCSSV---HTNV---------LLPADERSAALPIRAE-AMGDH---ELR-LERRELGGPGSSPPRCESKCGKCTPC
        FSF+ L L   S S S  S+  +  CSS    HTN+          LPAD R  A P  AE  +GDH   ELR L RRELGGPGSSPPRC S CGKCTPC
Subjt:  FSFILLSLFYRSGSSSTSSAGSDNSCSSV---HTNV---------LLPADERSAALPIRAE-AMGDH---ELR-LERRELGGPGSSPPRCESKCGKCTPC

Query:  KAVHVAVRPGTPVTAEYYPEAWRCKCGNKLYMP
         AVHV V PGTPVTAEYYPEAWRCKCGNKLYMP
Subjt:  KAVHVAVRPGTPVTAEYYPEAWRCKCGNKLYMP

A0A6J1KAS0 Epidermal patterning factor-like protein9.7e-3162.41Show/hide
Query:  FSFILLSLFYRSGSSSTSSAGSDNSCSSV---HTNV---------LLPADERSAALPIRAE-AMGDH---ELR-LERRELGGPGSSPPRCESKCGKCTPC
        FSF+ L L   S S S  S+  +  CSS    HTN+          LPAD R  A P  AE  +GDH   ELR L RRELGGPGSSPPRC S CGKCTPC
Subjt:  FSFILLSLFYRSGSSSTSSAGSDNSCSSV---HTNV---------LLPADERSAALPIRAE-AMGDH---ELR-LERRELGGPGSSPPRCESKCGKCTPC

Query:  KAVHVAVRPGTPVTAEYYPEAWRCKCGNKLYMP
         AVHV V PGTPVTAEYYPEAWRCKCGNKLYMP
Subjt:  KAVHVAVRPGTPVTAEYYPEAWRCKCGNKLYMP

A0A6J1KCE5 Epidermal patterning factor-like protein7.4e-3162.59Show/hide
Query:  FFFLFFSFILLSLFYRSGSSSTSSAGSDNSCSSV----HTNV---------LLPADERSAALPIRAE-AMGDH---ELR-LERRELGGPGSSPPRCESKC
        F FLF   IL+S       S  SSAG DN C S     HTN+          LPAD R  A P  AE  +GDH   ELR L RRELGGPGSSPPRC S C
Subjt:  FFFLFFSFILLSLFYRSGSSSTSSAGSDNSCSSV----HTNV---------LLPADERSAALPIRAE-AMGDH---ELR-LERRELGGPGSSPPRCESKC

Query:  GKCTPCKAVHVAVRPGTPVTAEYYPEAWRCKCGNKLYMP
        GKCTPC AVHV V PGTPVTAEYYPEAWRCKCGNKLYMP
Subjt:  GKCTPCKAVHVAVRPGTPVTAEYYPEAWRCKCGNKLYMP

SwissProt top hitse value%identityAlignment
Q1PEY6 EPIDERMAL PATTERNING FACTOR-like protein 68.2e-2750.38Show/hide
Query:  NIRNRLLIFFFFLFFSFILLSLFYRSGSSSTSSAGSDNSCSSVHTNVLLPADERSAALPIRAEAMGDHELRLE-RRELGGPGSSPPRCESKCGKCTPCKA
        N R +  +F+  L F  + +   +    +STSS  + NS S    N     + +S  +  +   +GD     E RR L G GSSPPRC SKCG+CTPCK 
Subjt:  NIRNRLLIFFFFLFFSFILLSLFYRSGSSSTSSAGSDNSCSSVHTNVLLPADERSAALPIRAEAMGDHELRLE-RRELGGPGSSPPRCESKCGKCTPCKA

Query:  VHVAVRPGTPVTAEYYPEAWRCKCGNKLYMP
        VHV V PGTPVTAEYYPEAWRCKCGNKLYMP
Subjt:  VHVAVRPGTPVTAEYYPEAWRCKCGNKLYMP

Q2V3I3 EPIDERMAL PATTERNING FACTOR-like protein 45.2e-2171.43Show/hide
Query:  RELGGPGSSPPRCESKCGKCTPCKAVHVAVRPGTPVTAEYYPEAWRCKCGNKLYMP
        +  GGPGSSPP C SKCGKC PCK VHV ++PG  +  EYYPEAWRCKCGNKL+MP
Subjt:  RELGGPGSSPPRCESKCGKCTPCKAVHVAVRPGTPVTAEYYPEAWRCKCGNKLYMP

Q7M1E7 Polygalacturonase1.7e-0848.98Show/hide
Query:  SSPPRCESKCGKCTPCKAVHVAVRPGTPVTAEYYPEAWRCKCGNKLYMP
        SSPP C++KC  C PCK   + V P  P   +YYP+ W C C NK+Y P
Subjt:  SSPPRCESKCGKCTPCKAVHVAVRPGTPVTAEYYPEAWRCKCGNKLYMP

Q9FY19 Polygalacturonase1.7e-0848.98Show/hide
Query:  SSPPRCESKCGKCTPCKAVHVAVRPGTPVTAEYYPEAWRCKCGNKLYMP
        SSPP C++KC  C PCK   + V P  P   +YYP+ W C C NK+Y P
Subjt:  SSPPRCESKCGKCTPCKAVHVAVRPGTPVTAEYYPEAWRCKCGNKLYMP

Q9LUH9 EPIDERMAL PATTERNING FACTOR-like protein 56.7e-2167.8Show/hide
Query:  LERRELGGPGSSPPRCESKCGKCTPCKAVHVAVRPGTPVTAEYYPEAWRCKCGNKLYMP
        ++++ LGGPGS PP C  KCGKC PCKAVHV ++PG  +  EYYPEAWRCKCGNKL+MP
Subjt:  LERRELGGPGSSPPRCESKCGKCTPCKAVHVAVRPGTPVTAEYYPEAWRCKCGNKLYMP

Arabidopsis top hitse value%identityAlignment
AT2G30370.1 allergen-related3.2e-2667.95Show/hide
Query:  RSAALPIRAEAMGDHELRLE-RRELGGPGSSPPRCESKCGKCTPCKAVHVAVRPGTPVTAEYYPEAWRCKCGNKLYMP
        +S  +  +   +GD     E RR L G GSSPPRC SKCG+CTPCK VHV V PGTPVTAEYYPEAWRCKCGNKLYMP
Subjt:  RSAALPIRAEAMGDHELRLE-RRELGGPGSSPPRCESKCGKCTPCKAVHVAVRPGTPVTAEYYPEAWRCKCGNKLYMP

AT2G30370.2 allergen-related5.8e-2850.38Show/hide
Query:  NIRNRLLIFFFFLFFSFILLSLFYRSGSSSTSSAGSDNSCSSVHTNVLLPADERSAALPIRAEAMGDHELRLE-RRELGGPGSSPPRCESKCGKCTPCKA
        N R +  +F+  L F  + +   +    +STSS  + NS S    N     + +S  +  +   +GD     E RR L G GSSPPRC SKCG+CTPCK 
Subjt:  NIRNRLLIFFFFLFFSFILLSLFYRSGSSSTSSAGSDNSCSSVHTNVLLPADERSAALPIRAEAMGDHELRLE-RRELGGPGSSPPRCESKCGKCTPCKA

Query:  VHVAVRPGTPVTAEYYPEAWRCKCGNKLYMP
        VHV V PGTPVTAEYYPEAWRCKCGNKLYMP
Subjt:  VHVAVRPGTPVTAEYYPEAWRCKCGNKLYMP

AT3G22820.1 allergen-related4.8e-2267.8Show/hide
Query:  LERRELGGPGSSPPRCESKCGKCTPCKAVHVAVRPGTPVTAEYYPEAWRCKCGNKLYMP
        ++++ LGGPGS PP C  KCGKC PCKAVHV ++PG  +  EYYPEAWRCKCGNKL+MP
Subjt:  LERRELGGPGSSPPRCESKCGKCTPCKAVHVAVRPGTPVTAEYYPEAWRCKCGNKLYMP

AT4G14723.1 BEST Arabidopsis thaliana protein match is: allergen-related (TAIR:AT3G22820.1)3.7e-2271.43Show/hide
Query:  RELGGPGSSPPRCESKCGKCTPCKAVHVAVRPGTPVTAEYYPEAWRCKCGNKLYMP
        +  GGPGSSPP C SKCGKC PCK VHV ++PG  +  EYYPEAWRCKCGNKL+MP
Subjt:  RELGGPGSSPPRCESKCGKCTPCKAVHVAVRPGTPVTAEYYPEAWRCKCGNKLYMP

AT4G37810.1 unknown protein4.3e-0730.63Show/hide
Query:  TNVLLPADERSAALPIRAEAMGDHELRLERRELGGPGSSPPRCES-KCGKCTPCKAVHVAVRPGT----PVT--------------------AEYYPEAW
        T+  L A+ R     +     GD ++++  R  G  GS PPRCE  +C  C  C+A+ V   P T    P+T                      Y P +W
Subjt:  TNVLLPADERSAALPIRAEAMGDHELRLERRELGGPGSSPPRCES-KCGKCTPCKAVHVAVRPGT----PVT--------------------AEYYPEAW

Query:  RCKCGNKLYMP
        +CKCGN +Y P
Subjt:  RCKCGNKLYMP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGTACTTCAATATTAGAAATAGACTATTAATCTTCTTCTTCTTCCTCTTCTTCTCTTTTATATTGTTATCATTATTCTACCGTAGCGGCAGCAGTAGCACATCTAG
TGCGGGTTCTGATAACAGCTGCTCATCTGTCCATACTAATGTGCTGCTGCCTGCTGATGAAAGAAGCGCGGCGCTGCCCATTAGGGCGGAGGCCATGGGGGATCACGAGT
TGAGGTTGGAAAGAAGAGAATTGGGTGGGCCAGGATCATCACCGCCGCGATGCGAGTCAAAGTGCGGGAAATGCACGCCTTGCAAGGCGGTTCATGTAGCGGTGCGGCCG
GGAACTCCGGTGACGGCTGAGTACTACCCAGAAGCCTGGAGGTGCAAATGTGGTAACAAGCTTTACATGCCCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGTACTTCAATATTAGAAATAGACTATTAATCTTCTTCTTCTTCCTCTTCTTCTCTTTTATATTGTTATCATTATTCTACCGTAGCGGCAGCAGTAGCACATCTAG
TGCGGGTTCTGATAACAGCTGCTCATCTGTCCATACTAATGTGCTGCTGCCTGCTGATGAAAGAAGCGCGGCGCTGCCCATTAGGGCGGAGGCCATGGGGGATCACGAGT
TGAGGTTGGAAAGAAGAGAATTGGGTGGGCCAGGATCATCACCGCCGCGATGCGAGTCAAAGTGCGGGAAATGCACGCCTTGCAAGGCGGTTCATGTAGCGGTGCGGCCG
GGAACTCCGGTGACGGCTGAGTACTACCCAGAAGCCTGGAGGTGCAAATGTGGTAACAAGCTTTACATGCCCTGA
Protein sequenceShow/hide protein sequence
MEYFNIRNRLLIFFFFLFFSFILLSLFYRSGSSSTSSAGSDNSCSSVHTNVLLPADERSAALPIRAEAMGDHELRLERRELGGPGSSPPRCESKCGKCTPCKAVHVAVRP
GTPVTAEYYPEAWRCKCGNKLYMP