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Sed0027299 (gene) of Chayote v1 genome

Gene IDSed0027299
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG02:1882161..1882952
RNA-Seq ExpressionSed0027299
SyntenySed0027299
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0054121.1 hypothetical protein E6C27_scaffold131G00330 [Cucumis melo var. makuwa]1.5e-0965.22Show/hide
Query:  DQMDEERKRKKSS-RKRKKKRSKEVFEWSQMEELKLLKKLVEFSTNVIAHEELYPFLRNGTSLAEASKI
        D M+EE++R+KSS    KKKR K +FEWS+ EEL LLKKLVEF++  I+ EE YPFLRNG SLAE SKI
Subjt:  DQMDEERKRKKSS-RKRKKKRSKEVFEWSQMEELKLLKKLVEFSTNVIAHEELYPFLRNGTSLAEASKI

KAG6585881.1 hypothetical protein SDJN03_18614, partial [Cucurbita argyrosperma subsp. sororia]3.2e-0453.12Show/hide
Query:  RKRKK--SSRKRKKKRSKEVFEWSQMEELKLLKKLVEFSTNVIAHEELYPFLRNGTSLAEASKI
        RKRK        ++K++K +F+WS+ EEL LL KLVEFS N + HE+ YPFLR+G SLA+  KI
Subjt:  RKRKK--SSRKRKKKRSKEVFEWSQMEELKLLKKLVEFSTNVIAHEELYPFLRNGTSLAEASKI

KGN49711.1 hypothetical protein Csa_018385 [Cucumis sativus]3.1e-0762.12Show/hide
Query:  MDEERK-RKKSSRKRKKKRSKEVFEWSQMEELKLLKKLVEFSTNVIAHEELYPFLRNGTSLAEASK
        M+E ++ RK+S+   KKKR K +FEWS+ EEL LLKKLVEF+T  I+ EE YPFLRNG SLAE S+
Subjt:  MDEERK-RKKSSRKRKKKRSKEVFEWSQMEELKLLKKLVEFSTNVIAHEELYPFLRNGTSLAEASK

TrEMBL top hitse value%identityAlignment
A0A0A0KPQ5 Uncharacterized protein1.5e-0762.12Show/hide
Query:  MDEERK-RKKSSRKRKKKRSKEVFEWSQMEELKLLKKLVEFSTNVIAHEELYPFLRNGTSLAEASK
        M+E ++ RK+S+   KKKR K +FEWS+ EEL LLKKLVEF+T  I+ EE YPFLRNG SLAE S+
Subjt:  MDEERK-RKKSSRKRKKKRSKEVFEWSQMEELKLLKKLVEFSTNVIAHEELYPFLRNGTSLAEASK

A0A5A7UKP8 Uncharacterized protein7.1e-1065.22Show/hide
Query:  DQMDEERKRKKSS-RKRKKKRSKEVFEWSQMEELKLLKKLVEFSTNVIAHEELYPFLRNGTSLAEASKI
        D M+EE++R+KSS    KKKR K +FEWS+ EEL LLKKLVEF++  I+ EE YPFLRNG SLAE SKI
Subjt:  DQMDEERKRKKSS-RKRKKKRSKEVFEWSQMEELKLLKKLVEFSTNVIAHEELYPFLRNGTSLAEASKI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGTTAAGGTTTAGGCCTTTGTTTCAGCAGGAGGGCGAAGAAAGCTTCGAGTTTAAACATCCAATAGTTCATAAAGCACAATCGAGTAGGGTTGGTGATCAGATGGA
CGAAGAAAGAAAGAGAAAAAAGAGTTCAAGGAAACGAAAGAAAAAGAGAAGTAAGGAAGTGTTTGAGTGGAGTCAAATGGAAGAGTTGAAGCTACTAAAGAAGTTGGTTG
AGTTCAGTACGAATGTGATAGCCCACGAAGAATTATACCCGTTTTTGAGAAACGGGACCTCGTTAGCCGAGGCGTCGAAGATTTAA
mRNA sequenceShow/hide mRNA sequence
ATGACGTTAAGGTTTAGGCCTTTGTTTCAGCAGGAGGGCGAAGAAAGCTTCGAGTTTAAACATCCAATAGTTCATAAAGCACAATCGAGTAGGGTTGGTGATCAGATGGA
CGAAGAAAGAAAGAGAAAAAAGAGTTCAAGGAAACGAAAGAAAAAGAGAAGTAAGGAAGTGTTTGAGTGGAGTCAAATGGAAGAGTTGAAGCTACTAAAGAAGTTGGTTG
AGTTCAGTACGAATGTGATAGCCCACGAAGAATTATACCCGTTTTTGAGAAACGGGACCTCGTTAGCCGAGGCGTCGAAGATTTAA
Protein sequenceShow/hide protein sequence
MTLRFRPLFQQEGEESFEFKHPIVHKAQSSRVGDQMDEERKRKKSSRKRKKKRSKEVFEWSQMEELKLLKKLVEFSTNVIAHEELYPFLRNGTSLAEASKI