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Sed0027301 (gene) of Chayote v1 genome

Gene IDSed0027301
OrganismSechium edule (Chayote v1)
DescriptionYcf20-like protein
Genome locationLG01:65713291..65716071
RNA-Seq ExpressionSed0027301
SyntenySed0027301
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR007572 - Uncharacterised protein family Ycf20


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6579671.1 hypothetical protein SDJN03_24119, partial [Cucurbita argyrosperma subsp. sororia]5.1e-7087.74Show/hide
Query:  MAQSASLVSSSLLKYGFTPKMNASYWRYDMIKSQPSPRGFHVKAVQDTGGPRRLVDIIRLVPELSRNYFRSPLKKALFGGISLLGGFYVAQTISLSFGPL
        MAQSASLVS+ LL Y FTP+ NASYWRYDMIKS+PSPR   +KAVQDTGGPRRLVDIIRLVPE+SRNYFRSP ++ALFGGISLLGGFYVAQTISLSFG L
Subjt:  MAQSASLVSSSLLKYGFTPKMNASYWRYDMIKSQPSPRGFHVKAVQDTGGPRRLVDIIRLVPELSRNYFRSPLKKALFGGISLLGGFYVAQTISLSFGPL

Query:  GVNDVIAAVVCALLTEYVTRFYYSRPKVTFPIALLNTFKMGFTYGLFIDAFKLAS
        GVNDVIAAVVC LLTEYVTRFYYSRPKVTFP+ALLN FKMGFTYGLFIDAFKLAS
Subjt:  GVNDVIAAVVCALLTEYVTRFYYSRPKVTFPIALLNTFKMGFTYGLFIDAFKLAS

XP_004143642.1 uncharacterized protein ycf20 [Cucumis sativus]3.5e-7190.38Show/hide
Query:  MAQSASLVSSSLLKYGFTPKMNASYWRYDMIKSQPS-PRGFHVKAVQDTGGPRRLVDIIRLVPELSRNYFRSPLKKALFGGISLLGGFYVAQTISLSFGP
        MAQSASLV +SLL YGFTPKMN SYWRYDM+KS+PS PR F VKAVQDTGGPRRLVDIIRLVPELSRNYFRSP ++ALFGGISLLGGFYVAQTISLSFG 
Subjt:  MAQSASLVSSSLLKYGFTPKMNASYWRYDMIKSQPS-PRGFHVKAVQDTGGPRRLVDIIRLVPELSRNYFRSPLKKALFGGISLLGGFYVAQTISLSFGP

Query:  LGVNDVIAAVVCALLTEYVTRFYYSRPKVTFPIALLNTFKMGFTYGLFIDAFKLAS
        LGVNDVIAAVVC LLTEYVTRFYYSRPKVTFPIALLN FKMGFTYGLFIDAFKLAS
Subjt:  LGVNDVIAAVVCALLTEYVTRFYYSRPKVTFPIALLNTFKMGFTYGLFIDAFKLAS

XP_022928979.1 uncharacterized protein ycf20 [Cucurbita moschata]8.7e-7087.74Show/hide
Query:  MAQSASLVSSSLLKYGFTPKMNASYWRYDMIKSQPSPRGFHVKAVQDTGGPRRLVDIIRLVPELSRNYFRSPLKKALFGGISLLGGFYVAQTISLSFGPL
        MAQSASLVS+ LL Y FTP+ NASYWRYD+IKS+PSPR   +KAVQDTGGPRRLVDIIRLVPELSRNYFRSP ++ALFGGISLLGGFYVAQTISLSFG L
Subjt:  MAQSASLVSSSLLKYGFTPKMNASYWRYDMIKSQPSPRGFHVKAVQDTGGPRRLVDIIRLVPELSRNYFRSPLKKALFGGISLLGGFYVAQTISLSFGPL

Query:  GVNDVIAAVVCALLTEYVTRFYYSRPKVTFPIALLNTFKMGFTYGLFIDAFKLAS
        GVNDVIAAVVC LLTEYVTRFYYSRPKVTFP+ALLN FKMGFTYGLFIDAFKLAS
Subjt:  GVNDVIAAVVCALLTEYVTRFYYSRPKVTFPIALLNTFKMGFTYGLFIDAFKLAS

XP_022969949.1 uncharacterized protein ycf20 [Cucurbita maxima]6.7e-7087.74Show/hide
Query:  MAQSASLVSSSLLKYGFTPKMNASYWRYDMIKSQPSPRGFHVKAVQDTGGPRRLVDIIRLVPELSRNYFRSPLKKALFGGISLLGGFYVAQTISLSFGPL
        MAQSASLVS+ LL Y FTP+ NASYWRYD+IKS+PSPR   +KAVQDTGGPRRLVDIIRLVPELSRNYFRSP ++ALFGGISLLGGFYVAQTISLSFG L
Subjt:  MAQSASLVSSSLLKYGFTPKMNASYWRYDMIKSQPSPRGFHVKAVQDTGGPRRLVDIIRLVPELSRNYFRSPLKKALFGGISLLGGFYVAQTISLSFGPL

Query:  GVNDVIAAVVCALLTEYVTRFYYSRPKVTFPIALLNTFKMGFTYGLFIDAFKLAS
        GVNDVIAAVVC LLTEYVTRFYYSRPKVTFP+ALLN FKMGFTYGLFIDAFKLAS
Subjt:  GVNDVIAAVVCALLTEYVTRFYYSRPKVTFPIALLNTFKMGFTYGLFIDAFKLAS

XP_023549885.1 uncharacterized protein LOC111808248 [Cucurbita pepo subsp. pepo]1.5e-6987.1Show/hide
Query:  MAQSASLVSSSLLKYGFTPKMNASYWRYDMIKSQPSPRGFHVKAVQDTGGPRRLVDIIRLVPELSRNYFRSPLKKALFGGISLLGGFYVAQTISLSFGPL
        MAQSASLVS+ LL Y FTP+ NASYWRYD+IKS+PSPR   +KAVQDTGGPRRLVDIIRLVPE+SRNYFRSP ++ALFGGISLLGGFYVAQTISLSFG L
Subjt:  MAQSASLVSSSLLKYGFTPKMNASYWRYDMIKSQPSPRGFHVKAVQDTGGPRRLVDIIRLVPELSRNYFRSPLKKALFGGISLLGGFYVAQTISLSFGPL

Query:  GVNDVIAAVVCALLTEYVTRFYYSRPKVTFPIALLNTFKMGFTYGLFIDAFKLAS
        GVNDVIAAVVC LLTEYVTRFYYSRPKVTFP+ALLN FKMGFTYGLFIDAFKLAS
Subjt:  GVNDVIAAVVCALLTEYVTRFYYSRPKVTFPIALLNTFKMGFTYGLFIDAFKLAS

TrEMBL top hitse value%identityAlignment
A0A0A0KPS1 Uncharacterized protein1.7e-7190.38Show/hide
Query:  MAQSASLVSSSLLKYGFTPKMNASYWRYDMIKSQPS-PRGFHVKAVQDTGGPRRLVDIIRLVPELSRNYFRSPLKKALFGGISLLGGFYVAQTISLSFGP
        MAQSASLV +SLL YGFTPKMN SYWRYDM+KS+PS PR F VKAVQDTGGPRRLVDIIRLVPELSRNYFRSP ++ALFGGISLLGGFYVAQTISLSFG 
Subjt:  MAQSASLVSSSLLKYGFTPKMNASYWRYDMIKSQPS-PRGFHVKAVQDTGGPRRLVDIIRLVPELSRNYFRSPLKKALFGGISLLGGFYVAQTISLSFGP

Query:  LGVNDVIAAVVCALLTEYVTRFYYSRPKVTFPIALLNTFKMGFTYGLFIDAFKLAS
        LGVNDVIAAVVC LLTEYVTRFYYSRPKVTFPIALLN FKMGFTYGLFIDAFKLAS
Subjt:  LGVNDVIAAVVCALLTEYVTRFYYSRPKVTFPIALLNTFKMGFTYGLFIDAFKLAS

A0A1S3CT33 uncharacterized protein ycf20 isoform X13.6e-6987.82Show/hide
Query:  MAQSASLVSSSLLKYGFTPKMNASYWRYDMIKSQPS-PRGFHVKAVQDTGGPRRLVDIIRLVPELSRNYFRSPLKKALFGGISLLGGFYVAQTISLSFGP
        MAQS SLV + LL YGF+ KMN+SYWRYDM+KS+PS PR F VKAVQDTGGPRRLVDIIRLVPELSRNYFRSP ++ALFGGISLLGGFYVAQTISLSFG 
Subjt:  MAQSASLVSSSLLKYGFTPKMNASYWRYDMIKSQPS-PRGFHVKAVQDTGGPRRLVDIIRLVPELSRNYFRSPLKKALFGGISLLGGFYVAQTISLSFGP

Query:  LGVNDVIAAVVCALLTEYVTRFYYSRPKVTFPIALLNTFKMGFTYGLFIDAFKLAS
        LGVNDVIAAVVC LLTEYVTRFYYSRPKVTFPIALLN FKMGFTYGLFIDAFKLAS
Subjt:  LGVNDVIAAVVCALLTEYVTRFYYSRPKVTFPIALLNTFKMGFTYGLFIDAFKLAS

A0A5D3BMH1 Ycf20-like protein isoform X12.5e-6291.18Show/hide
Query:  MNASYWRYDMIKSQPS-PRGFHVKAVQDTGGPRRLVDIIRLVPELSRNYFRSPLKKALFGGISLLGGFYVAQTISLSFGPLGVNDVIAAVVCALLTEYVT
        MN SYWRYDM+KS+PS PR F VKAVQDTGGPRRLVDIIRLVPELSRNYFRSP ++ALFGGISLLGGFYVAQTISLSFG LGVNDVIAAVVC LLTEYVT
Subjt:  MNASYWRYDMIKSQPS-PRGFHVKAVQDTGGPRRLVDIIRLVPELSRNYFRSPLKKALFGGISLLGGFYVAQTISLSFGPLGVNDVIAAVVCALLTEYVT

Query:  RFYYSRPKVTFPIALLNTFKMGFTYGLFIDAFKLAS
        RFYYSRPKVTFPIALLN FKMGFTYGLFIDAFKLAS
Subjt:  RFYYSRPKVTFPIALLNTFKMGFTYGLFIDAFKLAS

A0A6J1ESY7 uncharacterized protein ycf204.2e-7087.74Show/hide
Query:  MAQSASLVSSSLLKYGFTPKMNASYWRYDMIKSQPSPRGFHVKAVQDTGGPRRLVDIIRLVPELSRNYFRSPLKKALFGGISLLGGFYVAQTISLSFGPL
        MAQSASLVS+ LL Y FTP+ NASYWRYD+IKS+PSPR   +KAVQDTGGPRRLVDIIRLVPELSRNYFRSP ++ALFGGISLLGGFYVAQTISLSFG L
Subjt:  MAQSASLVSSSLLKYGFTPKMNASYWRYDMIKSQPSPRGFHVKAVQDTGGPRRLVDIIRLVPELSRNYFRSPLKKALFGGISLLGGFYVAQTISLSFGPL

Query:  GVNDVIAAVVCALLTEYVTRFYYSRPKVTFPIALLNTFKMGFTYGLFIDAFKLAS
        GVNDVIAAVVC LLTEYVTRFYYSRPKVTFP+ALLN FKMGFTYGLFIDAFKLAS
Subjt:  GVNDVIAAVVCALLTEYVTRFYYSRPKVTFPIALLNTFKMGFTYGLFIDAFKLAS

A0A6J1I440 uncharacterized protein ycf203.2e-7087.74Show/hide
Query:  MAQSASLVSSSLLKYGFTPKMNASYWRYDMIKSQPSPRGFHVKAVQDTGGPRRLVDIIRLVPELSRNYFRSPLKKALFGGISLLGGFYVAQTISLSFGPL
        MAQSASLVS+ LL Y FTP+ NASYWRYD+IKS+PSPR   +KAVQDTGGPRRLVDIIRLVPELSRNYFRSP ++ALFGGISLLGGFYVAQTISLSFG L
Subjt:  MAQSASLVSSSLLKYGFTPKMNASYWRYDMIKSQPSPRGFHVKAVQDTGGPRRLVDIIRLVPELSRNYFRSPLKKALFGGISLLGGFYVAQTISLSFGPL

Query:  GVNDVIAAVVCALLTEYVTRFYYSRPKVTFPIALLNTFKMGFTYGLFIDAFKLAS
        GVNDVIAAVVC LLTEYVTRFYYSRPKVTFP+ALLN FKMGFTYGLFIDAFKLAS
Subjt:  GVNDVIAAVVCALLTEYVTRFYYSRPKVTFPIALLNTFKMGFTYGLFIDAFKLAS

SwissProt top hitse value%identityAlignment
P51214 Uncharacterized protein ycf201.7e-0742.39Show/hide
Query:  SRNYFRSPLKKALFGGISLLGGFYVAQTISLSFGPLGVNDVIAAVVCALLTEYVTRFYYS-RPKVTFPIALLNTFKMGFTYGLFIDAFKLAS
        SR Y+   L +   G ISLL GF+++  +S   G  G   +IAA +     E V++  YS + K    I LLN  K+G TYGLF+DAFKL S
Subjt:  SRNYFRSPLKKALFGGISLLGGFYVAQTISLSFGPLGVNDVIAAVVCALLTEYVTRFYYS-RPKVTFPIALLNTFKMGFTYGLFIDAFKLAS

P72983 Ycf20-like protein4.4e-0833.33Show/hide
Query:  RLVDIIRLVPELSRNYFRSPLKKALFGGISLLGGFYVAQTISLSFGPLGVNDVIAAVVCALLTEYVTRFYYSR--PKVTFPIALLNTFKMGFTYGLFIDA
        RL  I+ +  +    +FR+P ++     +S L GF+V   ++ + G     DV+ A    L  E V R++Y R          +LN FKMG +Y LF++A
Subjt:  RLVDIIRLVPELSRNYFRSPLKKALFGGISLLGGFYVAQTISLSFGPLGVNDVIAAVVCALLTEYVTRFYYSR--PKVTFPIALLNTFKMGFTYGLFIDA

Query:  FKLAS
        FKL S
Subjt:  FKLAS

Q1XDS2 Uncharacterized protein ycf202.0e-0840.21Show/hide
Query:  LVPELSRNYFRSPLKKALFGGISLLGGFYVAQTISLSFGPLGVNDVIAAVVCALLTEYVTRFYYSRPK-VTFPIALLNTFKMGFTYGLFIDAFKLAS
        L+  L+   + S L +   G ISLL GF+++  +S   G  G   +IAA +    TE  ++  YS  K +   I L N FK+G TYGLF+DAFKL S
Subjt:  LVPELSRNYFRSPLKKALFGGISLLGGFYVAQTISLSFGPLGVNDVIAAVVCALLTEYVTRFYYSRPK-VTFPIALLNTFKMGFTYGLFIDAFKLAS

Q9MUL5 Uncharacterized protein ycf207.8e-0533.64Show/hide
Query:  DIIRLVPELSRNY-FRSPLKKALFGGISLLGGFYVAQTISLSFGPLGVNDVIAAVVCALLTEYVTRFYYSR----PKVTFPIALL-----NTFKMGFTYG
        +I +L+    +NY    P+K  L     LL GF++A  ++  FG  G  DV+ A +   + E +    YS+     K  F I+ L     N  K+G  +G
Subjt:  DIIRLVPELSRNY-FRSPLKKALFGGISLLGGFYVAQTISLSFGPLGVNDVIAAVVCALLTEYVTRFYYSR----PKVTFPIALL-----NTFKMGFTYG

Query:  LFIDAFKLAS
        LF+DAFKL S
Subjt:  LFIDAFKLAS

Arabidopsis top hitse value%identityAlignment
AT1G65420.1 Protein of unknown function (DUF565)2.3e-0433.75Show/hide
Query:  LLGGFYVAQTISLSFGPLGVNDVIAAVVCALLTEYVTRFYYSRP-------KVTFPIALLNTFKMGFTYGLFIDAFKLAS
        LL GFY A  ++   G  G  DV+ A +     E +    Y +P       K+   +  +N +K G   GLF+DAFKL S
Subjt:  LLGGFYVAQTISLSFGPLGVNDVIAAVVCALLTEYVTRFYYSRP-------KVTFPIALLNTFKMGFTYGLFIDAFKLAS

AT5G43050.1 Protein of unknown function (DUF565)3.4e-4881.03Show/hide
Query:  VKAVQDTGG--PRRLVDIIRLVPELSRNYFRSPLKKALFGGISLLGGFYVAQTISLSFGPLGVNDVIAAVVCALLTEYVTRFYYSRPKVTFPIALLNTFK
        ++A+Q+T G  PRRL+DIIR VPE+SRNYF+ P ++ LFGGISLLGGFYVAQTISLSFG LGVNDVIAAV+C LLTEYVTRFYYSR  VTFPIALLN FK
Subjt:  VKAVQDTGG--PRRLVDIIRLVPELSRNYFRSPLKKALFGGISLLGGFYVAQTISLSFGPLGVNDVIAAVVCALLTEYVTRFYYSRPKVTFPIALLNTFK

Query:  MGFTYGLFIDAFKLAS
        MGFTYGLFIDAFKLAS
Subjt:  MGFTYGLFIDAFKLAS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCACAGTCTGCAAGTTTAGTCTCTAGTAGCCTCCTAAAGTATGGTTTTACTCCCAAAATGAATGCTTCATATTGGAGATATGATATGATAAAATCACAACCATCCCC
TCGTGGTTTTCATGTCAAAGCCGTGCAAGATACGGGAGGTCCTCGTAGGTTAGTTGATATCATTAGACTCGTTCCTGAGCTCTCGAGAAATTACTTTCGAAGTCCTTTGA
AGAAGGCCCTTTTTGGAGGAATCTCATTGTTGGGTGGCTTTTATGTAGCACAAACTATCTCATTGTCATTTGGACCTTTAGGAGTAAATGATGTGATTGCTGCTGTGGTG
TGCGCTCTGCTTACTGAGTACGTTACTCGATTTTATTACAGTCGACCGAAAGTAACGTTCCCTATTGCTCTACTCAACACCTTCAAAATGGGTTTCACTTATGGTCTCTT
CATTGATGCTTTCAAACTGGCTAGTTAA
mRNA sequenceShow/hide mRNA sequence
ATCGAAAAGAAGCCGAGATTGAAAAAAGAAAAAAAAAATTCTCAATGCTTGGGCTTTCGATATGTGCTCTAATTTTTCAAATGCGAATGCACAAACTCGTCATTATCTTT
TCTCCATCGACAATTGCAGTTCTTCATCTCCTTTCTCACAAAGCGGAAACTGGAATCCAGTTCTAGGTTCTCAACCTTTTATTCAGCCATATAGGAAGTGAAAATCTAAT
GGCACAGTCTGCAAGTTTAGTCTCTAGTAGCCTCCTAAAGTATGGTTTTACTCCCAAAATGAATGCTTCATATTGGAGATATGATATGATAAAATCACAACCATCCCCTC
GTGGTTTTCATGTCAAAGCCGTGCAAGATACGGGAGGTCCTCGTAGGTTAGTTGATATCATTAGACTCGTTCCTGAGCTCTCGAGAAATTACTTTCGAAGTCCTTTGAAG
AAGGCCCTTTTTGGAGGAATCTCATTGTTGGGTGGCTTTTATGTAGCACAAACTATCTCATTGTCATTTGGACCTTTAGGAGTAAATGATGTGATTGCTGCTGTGGTGTG
CGCTCTGCTTACTGAGTACGTTACTCGATTTTATTACAGTCGACCGAAAGTAACGTTCCCTATTGCTCTACTCAACACCTTCAAAATGGGTTTCACTTATGGTCTCTTCA
TTGATGCTTTCAAACTGGCTAGTTAAATGCATTTGATGAAACCATTGAGGTAACTGGCATATTTACATTTGTAAAGTTCTACCCTTCTGTCTTCACTAATTTTGTTTCAT
ATCTTTAAAGCTTGTTCTTATTGTTTTTAATGAAATTTTTTCCCCTCTTTATTTGTTTCCTCTGTATATTTTCATCTATAATTTGCACTGAAGAGTTAGTTCTGAGCTAA
TCACCCTCAAATGCAATTTAGTAACAGAGTTTTAGATAAAACAAAAGGCAACAGATTTGAATGGAATTGATGTCTTTTTTTAGTTCAGTTCTTATTCAATGGAGAATTGT
TTGATTCAACTGCTCTTTTCCAAAAACCTGTTCTGATACCACGGGCATTGCTCCTTTTCTTTACCATCCCGTCTTACCGTCTCTGCTAGCGTCATCGACAATGTTTTTCG
AACATTGGTGGTCTCGATCTGCTTTAACCTTGTCGAGCACGAGAATCTTGTTCTCCCATATTTTTCTTATCATACCATTGAGGGGATACCTATTTTTTTGGTCAACGGGT
TATCTTCATCATTGGTTTATAGGCTTTATTTTCTTGCATTTATCTGTATCTATATTGCTGGGATGTATCGGCTTGTGATTATCAATATTCACCTTGATTCTCTTTTTTTT
TTTAA
Protein sequenceShow/hide protein sequence
MAQSASLVSSSLLKYGFTPKMNASYWRYDMIKSQPSPRGFHVKAVQDTGGPRRLVDIIRLVPELSRNYFRSPLKKALFGGISLLGGFYVAQTISLSFGPLGVNDVIAAVV
CALLTEYVTRFYYSRPKVTFPIALLNTFKMGFTYGLFIDAFKLAS