; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0027320 (gene) of Chayote v1 genome

Gene IDSed0027320
OrganismSechium edule (Chayote v1)
DescriptionSKI/DACH domain-containing protein 1
Genome locationLG13:26093853..26094314
RNA-Seq ExpressionSed0027320
SyntenySed0027320
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6608260.1 hypothetical protein SDJN03_01602, partial [Cucurbita argyrosperma subsp. sororia]7.6e-3462.5Show/hide
Query:  MATLHKFKSNLDDRRRHR---CCQRHPKHRQSPGVCSLCLTEKLSRILSTNASSRELSDS-PSSSSCSSSYDSSPSSCSSPDRPRARASFVFSAPSIFKK
        MA LHK KS+ DD RRHR   CC+RHPKHRQSPGVCSLCLTEKLS+IL+   SSR++SDS  SSSS SSSY SS SSCSS   P  R     +A S++KK
Subjt:  MATLHKFKSNLDDRRRHR---CCQRHPKHRQSPGVCSLCLTEKLSRILSTNASSRELSDS-PSSSSCSSSYDSSPSSCSSPDRPRARASFVFSAPSIFKK

Query:  SRSMAFGTRPRRGTESE--KKSTLGFCWRFLSRPSNKGMEMEKALMRS-TTVVLHTNVHG
        SRSMAF +R RRGT+S+  KKS LGF  RFL+RP  K ME+++ALM S ++ V+  NVHG
Subjt:  SRSMAFGTRPRRGTESE--KKSTLGFCWRFLSRPSNKGMEMEKALMRS-TTVVLHTNVHG

KAG7024556.1 hypothetical protein SDJN02_13373, partial [Cucurbita argyrosperma subsp. argyrosperma]3.5e-3160.74Show/hide
Query:  MATLHKFKSNLDDRRRHRCCQRHPKHRQSPGVCSLCLTEKLSRILSTNASSRELSDSPSSSSCSSSYDSSPSSCSSPDRPR--------ARASFVFSAPS
        MA  H+ KS+ DDRRR   C+RHPKH QSPGVCSLCL EKLS+I+ST  SSR++SDS  SSSCSSSY SS SSCSS   P          R +FVFSA S
Subjt:  MATLHKFKSNLDDRRRHRCCQRHPKHRQSPGVCSLCLTEKLSRILSTNASSRELSDSPSSSSCSSSYDSSPSSCSSPDRPR--------ARASFVFSAPS

Query:  IFKKSRSMAFGTRPRRGTESE--KKSTLGFCWRFLSRPSNKGMEMEKALMRSTTVVLHTNVHG
        IFKKSRSMAF  R RRGTES+  K + LGF  + L RP  K ME E+ LM S TVV   +VHG
Subjt:  IFKKSRSMAFGTRPRRGTESE--KKSTLGFCWRFLSRPSNKGMEMEKALMRSTTVVLHTNVHG

XP_022940504.1 uncharacterized protein LOC111446076 [Cucurbita moschata]3.1e-3563.19Show/hide
Query:  MATLHKFKSNLDDRRRHR---CCQRHPKHRQSPGVCSLCLTEKLSRILSTNASSRELSDSPSSSSCSS----SYDSSPSSCSSPDRPRARASFVFSAPSI
        MA LHK KS+ DD RRHR   CC+RHPKHRQSPGVCSLCLTEKLS+ILS   SSR++SDS SSSS  S    S  SS SSCSSP+RP  +A    +A SI
Subjt:  MATLHKFKSNLDDRRRHR---CCQRHPKHRQSPGVCSLCLTEKLSRILSTNASSRELSDSPSSSSCSS----SYDSSPSSCSSPDRPRARASFVFSAPSI

Query:  FKKSRSMAFGTRPRRGTESE--KKSTLGFCWRFLSRPSNKGMEMEKALMRS-TTVVLHTNVHG
        +KKSRSMAF +R RRGT+S+  KKS LGF  RFL+RP  K ME+E+ALM S ++ V+  NVHG
Subjt:  FKKSRSMAFGTRPRRGTESE--KKSTLGFCWRFLSRPSNKGMEMEKALMRS-TTVVLHTNVHG

XP_022981929.1 uncharacterized protein LOC111480927 [Cucurbita maxima]1.7e-3363.58Show/hide
Query:  MATLHKFKSNLDDRRRHR--CCQRHPKHRQSPGVCSLCLTEKLSRILSTNASSRELSDS-PSSSSCSSSYDSSP---SSCSSPDRPRARASFVFSAPSIF
        MA LHK KS+ DD RR R  CC+RHPKHRQSPGVCSLCLTEKLS+ILS   SSR+ SDS  SSSS SSSY SS    SSCSSP+RP  +A    +A SI+
Subjt:  MATLHKFKSNLDDRRRHR--CCQRHPKHRQSPGVCSLCLTEKLSRILSTNASSRELSDS-PSSSSCSSSYDSSP---SSCSSPDRPRARASFVFSAPSIF

Query:  KKSRSMAFGTRPRRGTESE--KKSTLGFCWRFLSRPSNKGMEMEKALMRS-TTVVLHTNVHG
        KKSRS+AF  R RRG +S+  KKS LGF  RFL+RP  K ME+E+ALM S T+ V+  NVHG
Subjt:  KKSRSMAFGTRPRRGTESE--KKSTLGFCWRFLSRPSNKGMEMEKALMRS-TTVVLHTNVHG

XP_023524412.1 uncharacterized protein LOC111788316 [Cucurbita pepo subsp. pepo]4.8e-3665.03Show/hide
Query:  MATLHKFKSNLDDRRRHR---CCQRHPKHRQSPGVCSLCLTEKLSRILSTNASSRELSDS-PSSSSCSSSYDSSP---SSCSSPDRPRARASFVFSAPSI
        MA LHK KS+ DD RRHR   CC+RHPKHRQSPGVCSLCLTEKLS+ILS   SSR++SDS  SSSS SSSY SS    SSCSSP+RP  +A    +A SI
Subjt:  MATLHKFKSNLDDRRRHR---CCQRHPKHRQSPGVCSLCLTEKLSRILSTNASSRELSDS-PSSSSCSSSYDSSP---SSCSSPDRPRARASFVFSAPSI

Query:  FKKSRSMAFGTRPRRGTESE--KKSTLGFCWRFLSRPSNKGMEMEKALMRS-TTVVLHTNVHG
        +KKSRSMAF +R RRGT+S+  KKS LGF  RFL+RP  K ME+E+ALM S T+ V+  NVHG
Subjt:  FKKSRSMAFGTRPRRGTESE--KKSTLGFCWRFLSRPSNKGMEMEKALMRS-TTVVLHTNVHG

TrEMBL top hitse value%identityAlignment
A0A0A0LJL6 Uncharacterized protein3.7e-2654.24Show/hide
Query:  MATLHKFKSNLDDRR----RHRCCQRHPKHRQSPGVCSLCLTEKLSRILSTNASSR-ELSDSPSSSSCSSSYDS----SPSSCSSP----------DRPR
        MA  H  KS++D RR    RH  CQRHP H QSPGVCSLCLTEKLSRI++  ASSR ++S+S SSSS SS Y S    S SS SSP            PR
Subjt:  MATLHKFKSNLDDRR----RHRCCQRHPKHRQSPGVCSLCLTEKLSRILSTNASSR-ELSDSPSSSSCSSSYDS----SPSSCSSP----------DRPR

Query:  ARASFVFSAPSIFKKSRSMAFGTRPRRGTESE--KKST---LGFCWRFLSRPSNKGMEMEKALMRSTTVVLHTNVHG
         + +FVFSA SIFKKS++MA   R    TES+  KKS    LGF  RFL+R   K ME ++ LMRS TVV   NVHG
Subjt:  ARASFVFSAPSIFKKSRSMAFGTRPRRGTESE--KKST---LGFCWRFLSRPSNKGMEMEKALMRSTTVVLHTNVHG

A0A6J1FD38 uncharacterized protein LOC1114430183.8e-3160.12Show/hide
Query:  MATLHKFKSNLDDRRRHRCCQRHPKHRQSPGVCSLCLTEKLSRILSTNASSRELSDSPSSSSCSSSYDSSPSSCSSPDRPR--------ARASFVFSAPS
        MA  H+ KS+ DDRRR   C+RHPKH QSPGVCSLCL EKLS+I+ST  SSR++SDS  SSSCS+SY SS SSCSS   P          R +FVFSA S
Subjt:  MATLHKFKSNLDDRRRHRCCQRHPKHRQSPGVCSLCLTEKLSRILSTNASSRELSDSPSSSSCSSSYDSSPSSCSSPDRPR--------ARASFVFSAPS

Query:  IFKKSRSMAFGTRPRRGTESE--KKSTLGFCWRFLSRPSNKGMEMEKALMRSTTVVLHTNVHG
        IFKKSRSMAF  R RRGTES+  K + LGF  + L RP  K ME E+ LM S TVV   +VHG
Subjt:  IFKKSRSMAFGTRPRRGTESE--KKSTLGFCWRFLSRPSNKGMEMEKALMRSTTVVLHTNVHG

A0A6J1FKF2 uncharacterized protein LOC1114460761.5e-3563.19Show/hide
Query:  MATLHKFKSNLDDRRRHR---CCQRHPKHRQSPGVCSLCLTEKLSRILSTNASSRELSDSPSSSSCSS----SYDSSPSSCSSPDRPRARASFVFSAPSI
        MA LHK KS+ DD RRHR   CC+RHPKHRQSPGVCSLCLTEKLS+ILS   SSR++SDS SSSS  S    S  SS SSCSSP+RP  +A    +A SI
Subjt:  MATLHKFKSNLDDRRRHR---CCQRHPKHRQSPGVCSLCLTEKLSRILSTNASSRELSDSPSSSSCSS----SYDSSPSSCSSPDRPRARASFVFSAPSI

Query:  FKKSRSMAFGTRPRRGTESE--KKSTLGFCWRFLSRPSNKGMEMEKALMRS-TTVVLHTNVHG
        +KKSRSMAF +R RRGT+S+  KKS LGF  RFL+RP  K ME+E+ALM S ++ V+  NVHG
Subjt:  FKKSRSMAFGTRPRRGTESE--KKSTLGFCWRFLSRPSNKGMEMEKALMRS-TTVVLHTNVHG

A0A6J1IHL9 uncharacterized protein LOC1114761652.2e-3161.35Show/hide
Query:  MATLHKFKSNLDDRRRHRCCQRHPKHRQSPGVCSLCLTEKLSRILSTNASSRELSDSPSSSSCSSSYDSSPSSCSSPDRPR--------ARASFVFSAPS
        MA  HK KS+ DDRRR   C+RHPKH QSPGVCSLCL EKLS+I+S   SSR++SDS  SSSCSSSY SS SSCSS   P          R +FVFSA S
Subjt:  MATLHKFKSNLDDRRRHRCCQRHPKHRQSPGVCSLCLTEKLSRILSTNASSRELSDSPSSSSCSSSYDSSPSSCSSPDRPR--------ARASFVFSAPS

Query:  IFKKSRSMAFGTRPRRGTESE--KKSTLGFCWRFLSRPSNKGMEMEKALMRSTTVVLHTNVHG
        IFKKSRSMAF  R +R TES+  K S LGF  RFL RP  K ME E+ LM S TVV   +VHG
Subjt:  IFKKSRSMAFGTRPRRGTESE--KKSTLGFCWRFLSRPSNKGMEMEKALMRSTTVVLHTNVHG

A0A6J1J366 uncharacterized protein LOC1114809278.2e-3463.58Show/hide
Query:  MATLHKFKSNLDDRRRHR--CCQRHPKHRQSPGVCSLCLTEKLSRILSTNASSRELSDS-PSSSSCSSSYDSSP---SSCSSPDRPRARASFVFSAPSIF
        MA LHK KS+ DD RR R  CC+RHPKHRQSPGVCSLCLTEKLS+ILS   SSR+ SDS  SSSS SSSY SS    SSCSSP+RP  +A    +A SI+
Subjt:  MATLHKFKSNLDDRRRHR--CCQRHPKHRQSPGVCSLCLTEKLSRILSTNASSRELSDS-PSSSSCSSSYDSSP---SSCSSPDRPRARASFVFSAPSIF

Query:  KKSRSMAFGTRPRRGTESE--KKSTLGFCWRFLSRPSNKGMEMEKALMRS-TTVVLHTNVHG
        KKSRS+AF  R RRG +S+  KKS LGF  RFL+RP  K ME+E+ALM S T+ V+  NVHG
Subjt:  KKSRSMAFGTRPRRGTESE--KKSTLGFCWRFLSRPSNKGMEMEKALMRS-TTVVLHTNVHG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G22470.1 unknown protein2.5e-0644.16Show/hide
Query:  CQRHPKHRQSPGVCSLCLTEKLSRI-------------------LSTNASSRELSDSPSSSSCSSSYDSSPSSCSSP
        C++HPKHRQSPG+CSLCL E LS++                   +S+ +S+   S+S  SS+  SSY SS SSC SP
Subjt:  CQRHPKHRQSPGVCSLCLTEKLSRI-------------------LSTNASSRELSDSPSSSSCSSSYDSSPSSCSSP

AT1G35210.1 unknown protein7.7e-0837.01Show/hide
Query:  KSNLDDRRRHRC-CQRHPKHRQSPGVCSLCLTEKLSRILSTNASSRELS------DSPSSSSCSSSYDSSPSSCSSPDRPRARASFVFSAP-------SI
        K+  +D+ ++   C++HPKHRQSPGVCSLCL E+LS  +   +S R  S       S ++SS SS   SS SSC SP   R R   +           S 
Subjt:  KSNLDDRRRHRC-CQRHPKHRQSPGVCSLCLTEKLSRILSTNASSRELS------DSPSSSSCSSSYDSSPSSCSSPDRPRARASFVFSAP-------SI

Query:  FKKSRSMAFGTRPRRGTESEKKSTLGF
          KSRS+A+     +  + + K+  GF
Subjt:  FKKSRSMAFGTRPRRGTESEKKSTLGF

AT1G72240.1 unknown protein8.5e-0749.35Show/hide
Query:  CQRHPKHRQSPGVCSLCLTEKLSRI-------------LSTNASSRELSDSPSSSSCSSSYDSSPSSCSSPDRPRAR
        C++H KHRQSPG+CSLCLTE+LS++              +T   S   S S S SSC SS  SS SSCSSP + R R
Subjt:  CQRHPKHRQSPGVCSLCLTEKLSRI-------------LSTNASSRELSDSPSSSSCSSSYDSSPSSCSSPDRPRAR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAACTCTTCACAAATTCAAATCTAATCTCGACGACCGCCGTCGCCACCGCTGCTGCCAACGCCATCCGAAGCACCGCCAATCCCCCGGCGTTTGCTCTCTTTGCTT
GACCGAAAAGCTCTCGCGCATCCTCTCCACGAATGCTTCGTCGCGGGAACTCTCCGACTCTCCTTCTTCCTCTTCATGTTCCTCTTCTTATGACTCCTCTCCTTCCTCTT
GTTCTTCGCCCGACCGGCCTCGTGCTAGGGCTAGCTTCGTGTTTTCGGCGCCTTCGATCTTTAAGAAGAGTAGATCGATGGCGTTTGGGACGAGACCGAGGCGGGGAACG
GAGAGCGAAAAGAAGAGTACGTTAGGGTTTTGTTGGAGGTTTTTGAGTCGGCCGAGCAATAAGGGGATGGAAATGGAGAAGGCTTTGATGCGCTCCACAACTGTTGTCCT
CCACACCAACGTGCATGGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAACTCTTCACAAATTCAAATCTAATCTCGACGACCGCCGTCGCCACCGCTGCTGCCAACGCCATCCGAAGCACCGCCAATCCCCCGGCGTTTGCTCTCTTTGCTT
GACCGAAAAGCTCTCGCGCATCCTCTCCACGAATGCTTCGTCGCGGGAACTCTCCGACTCTCCTTCTTCCTCTTCATGTTCCTCTTCTTATGACTCCTCTCCTTCCTCTT
GTTCTTCGCCCGACCGGCCTCGTGCTAGGGCTAGCTTCGTGTTTTCGGCGCCTTCGATCTTTAAGAAGAGTAGATCGATGGCGTTTGGGACGAGACCGAGGCGGGGAACG
GAGAGCGAAAAGAAGAGTACGTTAGGGTTTTGTTGGAGGTTTTTGAGTCGGCCGAGCAATAAGGGGATGGAAATGGAGAAGGCTTTGATGCGCTCCACAACTGTTGTCCT
CCACACCAACGTGCATGGCTGA
Protein sequenceShow/hide protein sequence
MATLHKFKSNLDDRRRHRCCQRHPKHRQSPGVCSLCLTEKLSRILSTNASSRELSDSPSSSSCSSSYDSSPSSCSSPDRPRARASFVFSAPSIFKKSRSMAFGTRPRRGT
ESEKKSTLGFCWRFLSRPSNKGMEMEKALMRSTTVVLHTNVHG