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Sed0027353 (gene) of Chayote v1 genome

Gene IDSed0027353
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG01:10747499..10747941
RNA-Seq ExpressionSed0027353
SyntenySed0027353
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6584084.1 hypothetical protein SDJN03_20016, partial [Cucurbita argyrosperma subsp. sororia]2.9e-3879.46Show/hide
Query:  MSILMRRNQNGYSKMEKEDPEEKKHRQAQFLIYKIMEQANNGKSRRPSSLRIRIRKFKLRIGKRLKKLKKVMSMSLSIARTGVCKQFGQLRTCKSLFGPP
        MS L+ R QNGYS+MEKEDPEEKKHRQAQFLIYKIMEQAN+G  RR S LRIRIRKFKLRIG+RLKKLKK MSM +  AR G+CKQFGQLRTCKSLFG  
Subjt:  MSILMRRNQNGYSKMEKEDPEEKKHRQAQFLIYKIMEQANNGKSRRPSSLRIRIRKFKLRIGKRLKKLKKVMSMSLSIARTGVCKQFGQLRTCKSLFGPP

Query:  KVETLAFPSLVT
        K E LAFPSLV+
Subjt:  KVETLAFPSLVT

KAG7019685.1 hypothetical protein SDJN02_18648, partial [Cucurbita argyrosperma subsp. argyrosperma]2.2e-3879.46Show/hide
Query:  MSILMRRNQNGYSKMEKEDPEEKKHRQAQFLIYKIMEQANNGKSRRPSSLRIRIRKFKLRIGKRLKKLKKVMSMSLSIARTGVCKQFGQLRTCKSLFGPP
        MS L+ R QNGYS+MEKEDPEEKKHRQAQFLIYKIMEQAN+G  RR S LRIRIRKFKLRIG+RLKKLKK MSM +  AR G+CKQFGQLRTCKSLFG  
Subjt:  MSILMRRNQNGYSKMEKEDPEEKKHRQAQFLIYKIMEQANNGKSRRPSSLRIRIRKFKLRIGKRLKKLKKVMSMSLSIARTGVCKQFGQLRTCKSLFGPP

Query:  KVETLAFPSLVT
        K E LAFPSLV+
Subjt:  KVETLAFPSLVT

KGN64527.1 hypothetical protein Csa_013452 [Cucumis sativus]2.3e-3575.45Show/hide
Query:  MSILMR-RNQNGYSKMEKEDPEEKKHRQAQFLIYKIMEQANNGKSRRPSSLRIRIRKFKLRIGKRLKKLKKVMSMSLSIARTGVCKQFGQLRTCKSLFGP
        MS+LM  R   GYSKMEKEDP+EKKHRQAQFLIYKIMEQA+NG  RRPS LRIRIRKFKLR+G+R KK+KK M+MS S AR G+C QFGQLR+CKSLFG 
Subjt:  MSILMR-RNQNGYSKMEKEDPEEKKHRQAQFLIYKIMEQANNGKSRRPSSLRIRIRKFKLRIGKRLKKLKKVMSMSLSIARTGVCKQFGQLRTCKSLFGP

Query:  PKVETLAFPS
         KVETL FP+
Subjt:  PKVETLAFPS

XP_022140046.1 uncharacterized protein LOC111010796 [Momordica charantia]1.1e-3777.88Show/hide
Query:  MSILMRRNQNGYSKMEKEDPEEKKHRQAQFLIYKIMEQANNGKSRRPSSLRIRIRKFKLRIGKRLKKLKKVMSMSLSIARTGVCKQFGQLRTCKSLFG-P
        MS+++ R Q+GYS+MEKEDPEEKKHR+AQFLIYKIMEQAN+G  RRP+ LRIRIRKFKLRIG+RLKKL+K MS SLS AR G+CKQ GQLRTCKSLFG  
Subjt:  MSILMRRNQNGYSKMEKEDPEEKKHRQAQFLIYKIMEQANNGKSRRPSSLRIRIRKFKLRIGKRLKKLKKVMSMSLSIARTGVCKQFGQLRTCKSLFG-P

Query:  PKVETLAFPSLVT
         KVETLAFPSLV+
Subjt:  PKVETLAFPSLVT

XP_023001322.1 uncharacterized protein LOC111495486 [Cucurbita maxima]5.8e-3980.36Show/hide
Query:  MSILMRRNQNGYSKMEKEDPEEKKHRQAQFLIYKIMEQANNGKSRRPSSLRIRIRKFKLRIGKRLKKLKKVMSMSLSIARTGVCKQFGQLRTCKSLFGPP
        MS L+ R QNGYS+MEKEDPEEKKHRQAQFLIYKIMEQAN+G  RR S LRIRIRKFKLRIG+RLKKLKK MSM    AR G+CKQFGQLRTCKSLFG P
Subjt:  MSILMRRNQNGYSKMEKEDPEEKKHRQAQFLIYKIMEQANNGKSRRPSSLRIRIRKFKLRIGKRLKKLKKVMSMSLSIARTGVCKQFGQLRTCKSLFGPP

Query:  KVETLAFPSLVT
        K E LAFPSLV+
Subjt:  KVETLAFPSLVT

TrEMBL top hitse value%identityAlignment
A0A0A0LUT4 Uncharacterized protein1.1e-3575.45Show/hide
Query:  MSILMR-RNQNGYSKMEKEDPEEKKHRQAQFLIYKIMEQANNGKSRRPSSLRIRIRKFKLRIGKRLKKLKKVMSMSLSIARTGVCKQFGQLRTCKSLFGP
        MS+LM  R   GYSKMEKEDP+EKKHRQAQFLIYKIMEQA+NG  RRPS LRIRIRKFKLR+G+R KK+KK M+MS S AR G+C QFGQLR+CKSLFG 
Subjt:  MSILMR-RNQNGYSKMEKEDPEEKKHRQAQFLIYKIMEQANNGKSRRPSSLRIRIRKFKLRIGKRLKKLKKVMSMSLSIARTGVCKQFGQLRTCKSLFGP

Query:  PKVETLAFPS
         KVETL FP+
Subjt:  PKVETLAFPS

A0A540M3N5 Uncharacterized protein1.3e-2060.61Show/hide
Query:  MSILMRRNQNGYSKMEKEDPEEKKHRQAQFLIYKIMEQANNGKSRRPSSLRIRIRKFKLRIGKRLKKLKKVMSMSLSIARTGVCKQ-FGQLRTCKSLFG
        M++ +R++   YSKM+KEDPEE  HR+AQFLIYK+M+Q      RRPS+LRIR+RK KL+IG+RLKKL+K M +S+S AR  V KQ F QL+TCK+LFG
Subjt:  MSILMRRNQNGYSKMEKEDPEEKKHRQAQFLIYKIMEQANNGKSRRPSSLRIRIRKFKLRIGKRLKKLKKVMSMSLSIARTGVCKQ-FGQLRTCKSLFG

A0A6J1CEK3 uncharacterized protein LOC1110107965.3e-3877.88Show/hide
Query:  MSILMRRNQNGYSKMEKEDPEEKKHRQAQFLIYKIMEQANNGKSRRPSSLRIRIRKFKLRIGKRLKKLKKVMSMSLSIARTGVCKQFGQLRTCKSLFG-P
        MS+++ R Q+GYS+MEKEDPEEKKHR+AQFLIYKIMEQAN+G  RRP+ LRIRIRKFKLRIG+RLKKL+K MS SLS AR G+CKQ GQLRTCKSLFG  
Subjt:  MSILMRRNQNGYSKMEKEDPEEKKHRQAQFLIYKIMEQANNGKSRRPSSLRIRIRKFKLRIGKRLKKLKKVMSMSLSIARTGVCKQFGQLRTCKSLFG-P

Query:  PKVETLAFPSLVT
         KVETLAFPSLV+
Subjt:  PKVETLAFPSLVT

A0A6J1KG77 uncharacterized protein LOC1114954862.8e-3980.36Show/hide
Query:  MSILMRRNQNGYSKMEKEDPEEKKHRQAQFLIYKIMEQANNGKSRRPSSLRIRIRKFKLRIGKRLKKLKKVMSMSLSIARTGVCKQFGQLRTCKSLFGPP
        MS L+ R QNGYS+MEKEDPEEKKHRQAQFLIYKIMEQAN+G  RR S LRIRIRKFKLRIG+RLKKLKK MSM    AR G+CKQFGQLRTCKSLFG P
Subjt:  MSILMRRNQNGYSKMEKEDPEEKKHRQAQFLIYKIMEQANNGKSRRPSSLRIRIRKFKLRIGKRLKKLKKVMSMSLSIARTGVCKQFGQLRTCKSLFGPP

Query:  KVETLAFPSLVT
        K E LAFPSLV+
Subjt:  KVETLAFPSLVT

W9RFE3 Uncharacterized protein2.2e-2060.42Show/hide
Query:  LMRRNQNGYSKMEKEDPEEKKHRQAQFLIYKIMEQANNGKSRRPSSLRIRIRKFKLRIGKRLKKLKKVMSMSLSIARTGVCKQF-GQLRTCKSLFG
        L+ R  N YSK++KEDPEE+  R+AQFLIYK+MEQA++   RRPS LRIRIRK K++IGKRL KL+K M +S+S A+  VCKQ   Q +TC+ LFG
Subjt:  LMRRNQNGYSKMEKEDPEEKKHRQAQFLIYKIMEQANNGKSRRPSSLRIRIRKFKLRIGKRLKKLKKVMSMSLSIARTGVCKQF-GQLRTCKSLFG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G11655.1 unknown protein3.6e-0740Show/hide
Query:  YSKMEKEDPEEKKHRQAQFLIYKIMEQANNGKSRRPSS--LRIRIRKFKLRIGKRLKKLKKVMSMSLSIARTGVCKQFGQ--LRTCKSLF
        YSKM+KEDPEE   R+A+FLIYK +++A+    R P S  +R+++   K++IGKRL KL++ +   +S  R G  ++     +R  K +F
Subjt:  YSKMEKEDPEEKKHRQAQFLIYKIMEQANNGKSRRPSS--LRIRIRKFKLRIGKRLKKLKKVMSMSLSIARTGVCKQFGQ--LRTCKSLF

AT4G04745.1 unknown protein1.5e-0839.36Show/hide
Query:  MSILMRRNQNGYSKMEKEDPEEKKHRQAQFLIYKIMEQANN----GKSRRPSS---LRIRIRKFKLRIGKRLKKLKKVMSMSLSIARTGVCKQF
        M+++++ +   Y+KMEKEDP+E  HR+AQFLI K++E+A++     + RR SS   + IR+   ++RIGK+L+KL+K  +   +   T   K F
Subjt:  MSILMRRNQNGYSKMEKEDPEEKKHRQAQFLIYKIMEQANN----GKSRRPSS---LRIRIRKFKLRIGKRLKKLKKVMSMSLSIARTGVCKQF

AT4G21902.1 unknown protein8.9e-0639.73Show/hide
Query:  MRRNQNGYSKMEKEDPEEKKHRQAQFLIYKIMEQAN----NGKSRRPSSLRI---RIRKFKLRIGKRLKKLKK
        M +N N Y+K+EKED  E  HR+AQFLI+KI+++A+      + +R +++++   R+   +++IGK+L+KL+K
Subjt:  MRRNQNGYSKMEKEDPEEKKHRQAQFLIYKIMEQAN----NGKSRRPSSLRI---RIRKFKLRIGKRLKKLKK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTATTTTGATGAGAAGAAATCAAAATGGATACTCAAAGATGGAGAAAGAAGACCCAGAAGAGAAAAAGCACAGACAAGCTCAGTTCTTGATTTACAAGATAATGGA
GCAGGCAAATAATGGCAAAAGTAGAAGACCCTCGAGTCTCCGAATCCGAATACGAAAGTTTAAGTTAAGGATTGGAAAGAGGTTGAAGAAGCTGAAGAAAGTTATGTCAA
TGAGTTTGTCAATAGCAAGAACTGGTGTCTGCAAGCAATTTGGACAGCTTAGAACTTGTAAAAGCCTTTTTGGACCACCCAAGGTGGAAACTTTGGCCTTTCCTTCTTTG
GTTACTTGA
mRNA sequenceShow/hide mRNA sequence
AAAGAAACCCCATTATGAAATGAATGTTCATGCTTGATTCAGAGTTGATTCCATTTTCTTAAGGAACTTCTCTGTTCTGGAAGGCTCTGTTTTTCAAAGGAAATATGAGT
ATTTTGATGAGAAGAAATCAAAATGGATACTCAAAGATGGAGAAAGAAGACCCAGAAGAGAAAAAGCACAGACAAGCTCAGTTCTTGATTTACAAGATAATGGAGCAGGC
AAATAATGGCAAAAGTAGAAGACCCTCGAGTCTCCGAATCCGAATACGAAAGTTTAAGTTAAGGATTGGAAAGAGGTTGAAGAAGCTGAAGAAAGTTATGTCAATGAGTT
TGTCAATAGCAAGAACTGGTGTCTGCAAGCAATTTGGACAGCTTAGAACTTGTAAAAGCCTTTTTGGACCACCCAAGGTGGAAACTTTGGCCTTTCCTTCTTTGGTTACT
TGA
Protein sequenceShow/hide protein sequence
MSILMRRNQNGYSKMEKEDPEEKKHRQAQFLIYKIMEQANNGKSRRPSSLRIRIRKFKLRIGKRLKKLKKVMSMSLSIARTGVCKQFGQLRTCKSLFGPPKVETLAFPSL
VT