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Sed0027371 (gene) of Chayote v1 genome

Gene IDSed0027371
OrganismSechium edule (Chayote v1)
DescriptionThreonine-tRNA ligase
Genome locationLG03:16560874..16564535
RNA-Seq ExpressionSed0027371
SyntenySed0027371
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6595681.1 hypothetical protein SDJN03_12234, partial [Cucurbita argyrosperma subsp. sororia]3.1e-3485.86Show/hide
Query:  MAEPLSGGGNHDLDQTLKPFYQRAAEAEDRLSRLEAALLSKKDTRDEEHLKTISELQAKLDRASEALIAEQKKAELVAAENAKLQYRINHLVRTARETH
        MAEPLS GG+HDL+QTLKPFY+RA+EAEDRLSRLEAALLSKKD  DEEHLKTISELQ+KLD A+EALIAEQKKAE+VAAENAKLQYRI HLVR AR TH
Subjt:  MAEPLSGGGNHDLDQTLKPFYQRAAEAEDRLSRLEAALLSKKDTRDEEHLKTISELQAKLDRASEALIAEQKKAELVAAENAKLQYRINHLVRTARETH

XP_008464609.1 PREDICTED: uncharacterized protein LOC103502450 isoform X2 [Cucumis melo]2.2e-3281.82Show/hide
Query:  MAEPLSGGGNHDLDQTLKPFYQRAAEAEDRLSRLEAALLSKKDTRDEEHLKTISELQAKLDRASEALIAEQKKAELVAAENAKLQYRINHLVRTARETH
        MAEP  GGGNHDL+QTLKPF+QRA++AEDRLSRLEAALLSKKD  +EEHLKTISELQ KLD A+ ALI E+KKAE+VA ENAKLQYRI HLVRTARETH
Subjt:  MAEPLSGGGNHDLDQTLKPFYQRAAEAEDRLSRLEAALLSKKDTRDEEHLKTISELQAKLDRASEALIAEQKKAELVAAENAKLQYRINHLVRTARETH

XP_022153876.1 uncharacterized protein LOC111021288 [Momordica charantia]5.6e-3684.62Show/hide
Query:  MAEPLSGGGNHDLDQTLKPFYQRAAEAEDRLSRLEAALLSKKDTRDEEHLKTISELQAKLDRASEALIAEQKKAELVAAENAKLQYRINHLVRTARETHQ
        MAEPL GGG HDL+Q+LKPF+QRA+EAEDRLSRLEA LLSKKDT DEEHLKTI+ELQ+KLD A+EALIAE+KKAE+VAAENAKLQYRI HLVRTARE HQ
Subjt:  MAEPLSGGGNHDLDQTLKPFYQRAAEAEDRLSRLEAALLSKKDTRDEEHLKTISELQAKLDRASEALIAEQKKAELVAAENAKLQYRINHLVRTARETHQ

Query:  KLEQ
        KLEQ
Subjt:  KLEQ

XP_022925102.1 uncharacterized protein LOC111432443 [Cucurbita moschata]2.0e-3385.71Show/hide
Query:  MAEPLSGGGNHDLDQTLKPFYQRAAEAEDRLSRLEAALLSKKDTRDEEHLKTISELQAKLDRASEALIAEQKKAELVAAENAKLQYRINHLVRTARET
        MAEPLS GG+HDL+QTLKPFY+RA+EAEDRLSRLEAALLSKKD  DEEHLKTISELQ+KLD A+EALIAEQKKAE+VAAENAKLQYRI HLVR AR T
Subjt:  MAEPLSGGGNHDLDQTLKPFYQRAAEAEDRLSRLEAALLSKKDTRDEEHLKTISELQAKLDRASEALIAEQKKAELVAAENAKLQYRINHLVRTARET

XP_022966502.1 uncharacterized protein LOC111466136 [Cucurbita maxima]1.1e-3486.87Show/hide
Query:  MAEPLSGGGNHDLDQTLKPFYQRAAEAEDRLSRLEAALLSKKDTRDEEHLKTISELQAKLDRASEALIAEQKKAELVAAENAKLQYRINHLVRTARETH
        MAEPLS GG+HDL+QTLKPFYQRA+EAEDRLSRLEAALLSKKD  DEEHLKTISELQ+KLD A+EALIAEQKKAE+VAAENAKLQYRI HLVR AR TH
Subjt:  MAEPLSGGGNHDLDQTLKPFYQRAAEAEDRLSRLEAALLSKKDTRDEEHLKTISELQAKLDRASEALIAEQKKAELVAAENAKLQYRINHLVRTARETH

TrEMBL top hitse value%identityAlignment
A0A1S3CLW0 uncharacterized protein LOC103502450 isoform X21.1e-3281.82Show/hide
Query:  MAEPLSGGGNHDLDQTLKPFYQRAAEAEDRLSRLEAALLSKKDTRDEEHLKTISELQAKLDRASEALIAEQKKAELVAAENAKLQYRINHLVRTARETH
        MAEP  GGGNHDL+QTLKPF+QRA++AEDRLSRLEAALLSKKD  +EEHLKTISELQ KLD A+ ALI E+KKAE+VA ENAKLQYRI HLVRTARETH
Subjt:  MAEPLSGGGNHDLDQTLKPFYQRAAEAEDRLSRLEAALLSKKDTRDEEHLKTISELQAKLDRASEALIAEQKKAELVAAENAKLQYRINHLVRTARETH

A0A6J1DM00 uncharacterized protein LOC1110212882.7e-3684.62Show/hide
Query:  MAEPLSGGGNHDLDQTLKPFYQRAAEAEDRLSRLEAALLSKKDTRDEEHLKTISELQAKLDRASEALIAEQKKAELVAAENAKLQYRINHLVRTARETHQ
        MAEPL GGG HDL+Q+LKPF+QRA+EAEDRLSRLEA LLSKKDT DEEHLKTI+ELQ+KLD A+EALIAE+KKAE+VAAENAKLQYRI HLVRTARE HQ
Subjt:  MAEPLSGGGNHDLDQTLKPFYQRAAEAEDRLSRLEAALLSKKDTRDEEHLKTISELQAKLDRASEALIAEQKKAELVAAENAKLQYRINHLVRTARETHQ

Query:  KLEQ
        KLEQ
Subjt:  KLEQ

A0A6J1EAW7 uncharacterized protein LOC1114324439.6e-3485.71Show/hide
Query:  MAEPLSGGGNHDLDQTLKPFYQRAAEAEDRLSRLEAALLSKKDTRDEEHLKTISELQAKLDRASEALIAEQKKAELVAAENAKLQYRINHLVRTARET
        MAEPLS GG+HDL+QTLKPFY+RA+EAEDRLSRLEAALLSKKD  DEEHLKTISELQ+KLD A+EALIAEQKKAE+VAAENAKLQYRI HLVR AR T
Subjt:  MAEPLSGGGNHDLDQTLKPFYQRAAEAEDRLSRLEAALLSKKDTRDEEHLKTISELQAKLDRASEALIAEQKKAELVAAENAKLQYRINHLVRTARET

A0A6J1HN54 uncharacterized protein LOC1114661365.1e-3586.87Show/hide
Query:  MAEPLSGGGNHDLDQTLKPFYQRAAEAEDRLSRLEAALLSKKDTRDEEHLKTISELQAKLDRASEALIAEQKKAELVAAENAKLQYRINHLVRTARETH
        MAEPLS GG+HDL+QTLKPFYQRA+EAEDRLSRLEAALLSKKD  DEEHLKTISELQ+KLD A+EALIAEQKKAE+VAAENAKLQYRI HLVR AR TH
Subjt:  MAEPLSGGGNHDLDQTLKPFYQRAAEAEDRLSRLEAALLSKKDTRDEEHLKTISELQAKLDRASEALIAEQKKAELVAAENAKLQYRINHLVRTARETH

A0A6P4AJX2 uncharacterized protein LOC1074316051.3e-2266.67Show/hide
Query:  HDLDQTLKPFYQRAAEAEDRLSRLEAALLSKKDTRDEEHLKTISELQAKLDRASEALIAEQKKAELVAAENAKLQYRINHLVRTARETHQKLE
        +DL +TLKPFYQRA++AEDRLSRLE AL SKKDT + EHLKTI+ELQ+KL+ A   LI+E+++   +AAENAKLQYRI+HLVR  RE+ QK+E
Subjt:  HDLDQTLKPFYQRAAEAEDRLSRLEAALLSKKDTRDEEHLKTISELQAKLDRASEALIAEQKKAELVAAENAKLQYRINHLVRTARETHQKLE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G57320.1 unknown protein1.4e-1345.83Show/hide
Query:  NHDLDQTLKPFYQRAAEAEDRLSRLEAALLS-KKDTRDEEHLKTISELQAKLDRASEALIAEQKKAELVAAENAKLQYRINHLVRTARETHQKLEQ
        +H L + LKPF+ RA EA++RL++LEAAL S K D  D + ++   +LQ+KL+ A+  +  EQ K + +  ENAK +YRI HLVR  ++  QKLE+
Subjt:  NHDLDQTLKPFYQRAAEAEDRLSRLEAALLS-KKDTRDEEHLKTISELQAKLDRASEALIAEQKKAELVAAENAKLQYRINHLVRTARETHQKLEQ

AT3G57320.2 unknown protein1.7e-0644.62Show/hide
Query:  NHDLDQTLKPFYQRAAEAEDRLSRLEAALLS-KKDTRDEEHLKTISELQAKLDRASEALIAEQKK
        +H L + LKPF+ RA EA++RL++LEAAL S K D  D + ++   +LQ+KL+ A+  +  EQ K
Subjt:  NHDLDQTLKPFYQRAAEAEDRLSRLEAALLS-KKDTRDEEHLKTISELQAKLDRASEALIAEQKK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGAACCATTGAGCGGAGGAGGCAACCACGATCTCGACCAGACCTTGAAGCCTTTCTATCAAAGAGCCGCCGAAGCCGAGGATCGTTTGTCAAGACTAGAAGCTGC
GCTTTTGAGTAAGAAAGATACTCGTGACGAGGAACATCTGAAGACGATAAGTGAACTCCAAGCAAAACTAGACCGTGCAAGCGAAGCGCTGATTGCAGAACAGAAAAAGG
CTGAGTTGGTTGCTGCAGAAAACGCAAAGCTCCAGTATCGCATAAACCATCTTGTGAGGACAGCAAGGGAAACACATCAAAAGTTGGAGCAAAAATGA
mRNA sequenceShow/hide mRNA sequence
AAAAATCTCTTCTTGTTTGATGAGACGAGACAAAAAAACACCTCTTAGCCATCGAAGTTGCAGGTTTTGCAAAAATGGCGGAACCATTGAGCGGAGGAGGCAACCACGAT
CTCGACCAGACCTTGAAGCCTTTCTATCAAAGAGCCGCCGAAGCCGAGGATCGTTTGTCAAGACTAGAAGCTGCGCTTTTGAGTAAGAAAGATACTCGTGACGAGGAACA
TCTGAAGACGATAAGTGAACTCCAAGCAAAACTAGACCGTGCAAGCGAAGCGCTGATTGCAGAACAGAAAAAGGCTGAGTTGGTTGCTGCAGAAAACGCAAAGCTCCAGT
ATCGCATAAACCATCTTGTGAGGACAGCAAGGGAAACACATCAAAAGTTGGAGCAAAAATGACAGTTTCTTCTATTTGGAAGAGAGACTTTGATAGAAGCTGATTTTTAA
TTTTTATTTTTAAATGTTCCCTTGCAATTTAGAAACATTTGGAAGGGAATTATTGAGATAGTAGACTGAAGAATTTGAGTTGAAATTTTTGAAACCACAAATGGGGAAAA
TGAAATTGTGTT
Protein sequenceShow/hide protein sequence
MAEPLSGGGNHDLDQTLKPFYQRAAEAEDRLSRLEAALLSKKDTRDEEHLKTISELQAKLDRASEALIAEQKKAELVAAENAKLQYRINHLVRTARETHQKLEQK