; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0027373 (gene) of Chayote v1 genome

Gene IDSed0027373
OrganismSechium edule (Chayote v1)
DescriptionPolyprotein
Genome locationLG08:20321222..20321971
RNA-Seq ExpressionSed0027373
SyntenySed0027373
Gene Ontology termsNA
InterPro domainsIPR028919 - Viral movement protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0051217.1 polyprotein [Cucumis melo var. makuwa]3.0e-4762.57Show/hide
Query:  CGNGSQDM----------VTQNRRFYTMLNVGMIQIGVKTLTTKIPSNASIIVCVFDTRIIENFEDSVLGLVESKLSDGPMYFNVFPNITMSLFHPKLLE
        C NGSQ              Q +RF TMLN+GMIQIGVKTLTTKI SNASII+CVFDTR  +NFEDS+LGLVE+KLSDGPM+FN+FPNITMSLFHPKL E
Subjt:  CGNGSQDM----------VTQNRRFYTMLNVGMIQIGVKTLTTKIPSNASIIVCVFDTRIIENFEDSVLGLVESKLSDGPMYFNVFPNITMSLFHPKLLE

Query:  AF--------------------LMWRSCYKLQDRVLPDTFLESPQGKTVFFQTGFENSNVAVQKVSKWDDV
        +                     LMWR+CYKLQ    P   +ESPQGKTVFFQT FENS VAVQKVS+WD+V
Subjt:  AF--------------------LMWRSCYKLQDRVLPDTFLESPQGKTVFFQTGFENSNVAVQKVSKWDDV

KAG6588194.1 hypothetical protein SDJN03_16759, partial [Cucurbita argyrosperma subsp. sororia]4.4e-5955.6Show/hide
Query:  MATFLKACRSSNPR--GESHALDREEYIKKGKNLLNWKIPKVPTSKIYKTNPFTFFSDPSIITKETNISCGNGSQD----------MVTQNRRFYTMLNV
        MATFLK C SS  R  G+ HALD EE+IKKG NLLNWKIPKVPTSKIYKTNPF F SDPSI TK+  ++CGNG+Q              +++RFY+M NV
Subjt:  MATFLKACRSSNPR--GESHALDREEYIKKGKNLLNWKIPKVPTSKIYKTNPFTFFSDPSIITKETNISCGNGSQD----------MVTQNRRFYTMLNV

Query:  GMIQIGVKTLTTKIPSNASIIVCVFDTRIIENFEDSVLGLVESKLSDGPMYFNVFPNITMSLFHPKLLEAFLMWRSCYKLQDRVLPDTFLESPQGKTVFF
        GMIQIG KTLT KIP NA+I +CVFDTR  E FEDS+LG+VE++L   P+                     L WR+CYKLQ+  L +  +ES  G+TVFF
Subjt:  GMIQIGVKTLTTKIPSNASIIVCVFDTRIIENFEDSVLGLVESKLSDGPMYFNVFPNITMSLFHPKLLEAFLMWRSCYKLQDRVLPDTFLESPQGKTVFF

Query:  QTGFENSNVAVQKVSKWDDVHGKLVEIISLEK
        QT FENS+VAV KVS WDDV  K++++   EK
Subjt:  QTGFENSNVAVQKVSKWDDVHGKLVEIISLEK

KGN66494.1 hypothetical protein Csa_006902 [Cucumis sativus]1.7e-7465.13Show/hide
Query:  MATFLKACRSSNPRGESHALDREEYIKKGKNLLNWKIPKVPTSKIYKTNPFTFFSDPSIITKETNISCGNGSQ--------DMVT--QNRRFYTMLNVGM
        M+TF   C SSN  G SH+LD EEYIKKGKNLL WKIPK+PT+KIYK+NPF FFSDP I TKE  + C NGSQ         MV   Q +RFYT LN+GM
Subjt:  MATFLKACRSSNPRGESHALDREEYIKKGKNLLNWKIPKVPTSKIYKTNPFTFFSDPSIITKETNISCGNGSQ--------DMVT--QNRRFYTMLNVGM

Query:  IQIGVKTLTTKIPSNASIIVCVFDTRIIENFEDSVLGLVESKLSDGPMYFNVFPNITMSLFHPKLLEAF--------------------LMWRSCYKLQD
        IQIGVKTLTTKIPSNASII+CVFDTR  +NFEDS+LGLVESKL DGP++FN+FPNITM +FHPKLLE+F                    LMWR+CYKLQ 
Subjt:  IQIGVKTLTTKIPSNASIIVCVFDTRIIENFEDSVLGLVESKLSDGPMYFNVFPNITMSLFHPKLLEAF--------------------LMWRSCYKLQD

Query:  RVLPDTFLESPQGKTVFFQTGFENSNVAVQKVSKWDDV
          LP   +ESPQGKTVFFQT FENS VA QKVS+WD+V
Subjt:  RVLPDTFLESPQGKTVFFQTGFENSNVAVQKVSKWDDV

TYK18873.1 polyprotein [Cucumis melo var. makuwa]3.5e-4863.16Show/hide
Query:  CGNGSQDM----------VTQNRRFYTMLNVGMIQIGVKTLTTKIPSNASIIVCVFDTRIIENFEDSVLGLVESKLSDGPMYFNVFPNITMSLFHPKLLE
        C NGSQ              Q +RF TMLN+GMIQIGVKTLTTKIPSNASII+CVFDTR  +NFEDS+LGLVE+KLSDGPM+FN+FPNITMSLFHPKL E
Subjt:  CGNGSQDM----------VTQNRRFYTMLNVGMIQIGVKTLTTKIPSNASIIVCVFDTRIIENFEDSVLGLVESKLSDGPMYFNVFPNITMSLFHPKLLE

Query:  AF--------------------LMWRSCYKLQDRVLPDTFLESPQGKTVFFQTGFENSNVAVQKVSKWDDV
        +                     LMWR+CYKLQ    P   +ESPQGKTVFFQT FENS VAVQKVS+WD+V
Subjt:  AF--------------------LMWRSCYKLQDRVLPDTFLESPQGKTVFFQTGFENSNVAVQKVSKWDDV

XP_038880673.1 uncharacterized protein LOC120072292 [Benincasa hispida]7.8e-6462.39Show/hide
Query:  MATFLKACRSSNPRGESHALDREEYIKKGKNLLNWKIPKVPTSKIYKTNPFTFFSDPSIITKETNISCGNGSQ--DMVTQN--------RRFYTMLNVGM
        MAT  K C SSN  G SHALD EEYIKKG NLL WKIPKVPT+KIYK NPFTFFSDPSI T+E  +SC NGSQ   ++ +N         RFYT +NVGM
Subjt:  MATFLKACRSSNPRGESHALDREEYIKKGKNLLNWKIPKVPTSKIYKTNPFTFFSDPSIITKETNISCGNGSQ--DMVTQN--------RRFYTMLNVGM

Query:  IQIGVKTLTTKIPSNASIIVCVFDTRIIENFEDSVLGLVESKLSDGPMYFNVFPNITMSLFHPKLLEAFLMWRSCYKLQDRVLPDTFLESPQGKTVFFQT
        IQIGVK +TTKIPSNASII+CVFD+R  ENFED++LGLVES L      F   P  T  +         LMWR+CYKLQ+  LP+  LESPQGKTV+FQT
Subjt:  IQIGVKTLTTKIPSNASIIVCVFDTRIIENFEDSVLGLVESKLSDGPMYFNVFPNITMSLFHPKLLEAFLMWRSCYKLQDRVLPDTFLESPQGKTVFFQT

Query:  GFENSNVAVQKVSKWDDVHGKLVEII
          +NS VAVQKVSKWD+V  KL  II
Subjt:  GFENSNVAVQKVSKWDDVHGKLVEII

TrEMBL top hitse value%identityAlignment
A0A0A0LXM3 Uncharacterized protein2.2e-4045.16Show/hide
Query:  MATFLKACRSSNPRGESHALDREEYIKKGKNLLNWKIPKVPTSKIY---KTNPFTFF---SDPSIITKETNISCGN--GSQDMVTQ-------NRR--FY
        M+ F K+C S N  G+ H+L+ EEY++KGK+L+ WK+P+VP  KIY   + N F  F   +DPSI T E  IS GN  GS  +  Q        RR  F+
Subjt:  MATFLKACRSSNPRGESHALDREEYIKKGKNLLNWKIPKVPTSKIY---KTNPFTFF---SDPSIITKETNISCGN--GSQDMVTQ-------NRR--FY

Query:  TMLNVGMIQIGVKTLTTKIPSNASIIVCVFDTRIIENFEDSVLGLVESKLSDGPMYFNVFPNITMSLFHPKLLEAF--------------------LMWR
          +N+G++QIGVKTLT KIP NASII+C+ D R IE  EDS+L LVESKL DGP YFNVFPNI +SLF   +                        +  R
Subjt:  TMLNVGMIQIGVKTLTTKIPSNASIIVCVFDTRIIENFEDSVLGLVESKLSDGPMYFNVFPNITMSLFHPKLLEAF--------------------LMWR

Query:  SCYKL-QDRVLPDTFLESPQGKTVFFQTGF--ENSNVAVQKVSKWDDV
        +CYKL Q+    +  +ESP GKTVFFQ     ++ +  VQKV+ W+ V
Subjt:  SCYKL-QDRVLPDTFLESPQGKTVFFQTGF--ENSNVAVQKVSKWDDV

A0A0A0LZS0 Uncharacterized protein8.1e-7565.13Show/hide
Query:  MATFLKACRSSNPRGESHALDREEYIKKGKNLLNWKIPKVPTSKIYKTNPFTFFSDPSIITKETNISCGNGSQ--------DMVT--QNRRFYTMLNVGM
        M+TF   C SSN  G SH+LD EEYIKKGKNLL WKIPK+PT+KIYK+NPF FFSDP I TKE  + C NGSQ         MV   Q +RFYT LN+GM
Subjt:  MATFLKACRSSNPRGESHALDREEYIKKGKNLLNWKIPKVPTSKIYKTNPFTFFSDPSIITKETNISCGNGSQ--------DMVT--QNRRFYTMLNVGM

Query:  IQIGVKTLTTKIPSNASIIVCVFDTRIIENFEDSVLGLVESKLSDGPMYFNVFPNITMSLFHPKLLEAF--------------------LMWRSCYKLQD
        IQIGVKTLTTKIPSNASII+CVFDTR  +NFEDS+LGLVESKL DGP++FN+FPNITM +FHPKLLE+F                    LMWR+CYKLQ 
Subjt:  IQIGVKTLTTKIPSNASIIVCVFDTRIIENFEDSVLGLVESKLSDGPMYFNVFPNITMSLFHPKLLEAF--------------------LMWRSCYKLQD

Query:  RVLPDTFLESPQGKTVFFQTGFENSNVAVQKVSKWDDV
          LP   +ESPQGKTVFFQT FENS VA QKVS+WD+V
Subjt:  RVLPDTFLESPQGKTVFFQTGFENSNVAVQKVSKWDDV

A0A2G9GSM0 Uncharacterized protein3.7e-2735.48Show/hide
Query:  MATFLKACRSSNPRGESHALDREEYI----KKGKNLLNWKIPKVPTSKIYKTNPFTFFSDPSIITKETNISCGNGSQDMVTQNRRFYTMLNVGMIQIGVK
        M   +++   +N    S   DR + I       +NL NWK+P+  TS+IY++  F F SD  II  E        S+ ++ Q+++ Y  L++GMIQIG+K
Subjt:  MATFLKACRSSNPRGESHALDREEYI----KKGKNLLNWKIPKVPTSKIYKTNPFTFFSDPSIITKETNISCGNGSQDMVTQNRRFYTMLNVGMIQIGVK

Query:  TLTTKIPSNASIIVCVFDTRIIENFEDSVLGLVESKLSDGPMYFNVFPNITMSLFHPKLLEAF-------------------LMWRSCYKLQDRVLPDTF
         L T++  N S ++ + D R    FEDS+LG+VES L DGP+YF  FPN T+SL  P +L++                    L++R CYK+ + V+P T 
Subjt:  TLTTKIPSNASIIVCVFDTRIIENFEDSVLGLVESKLSDGPMYFNVFPNITMSLFHPKLLEAF-------------------LMWRSCYKLQDRVLPDTF

Query:  LES-----PQGKTVFFQTGFENSNVAVQKVSKWDDVHGKLVEIISLEK
        + S      +G+T  F T  E SN+ V K   W+ V  KL+E+ +LE+
Subjt:  LES-----PQGKTVFFQTGFENSNVAVQKVSKWDDVHGKLVEIISLEK

A0A5A7U9X3 Polyprotein1.4e-4762.57Show/hide
Query:  CGNGSQDM----------VTQNRRFYTMLNVGMIQIGVKTLTTKIPSNASIIVCVFDTRIIENFEDSVLGLVESKLSDGPMYFNVFPNITMSLFHPKLLE
        C NGSQ              Q +RF TMLN+GMIQIGVKTLTTKI SNASII+CVFDTR  +NFEDS+LGLVE+KLSDGPM+FN+FPNITMSLFHPKL E
Subjt:  CGNGSQDM----------VTQNRRFYTMLNVGMIQIGVKTLTTKIPSNASIIVCVFDTRIIENFEDSVLGLVESKLSDGPMYFNVFPNITMSLFHPKLLE

Query:  AF--------------------LMWRSCYKLQDRVLPDTFLESPQGKTVFFQTGFENSNVAVQKVSKWDDV
        +                     LMWR+CYKLQ    P   +ESPQGKTVFFQT FENS VAVQKVS+WD+V
Subjt:  AF--------------------LMWRSCYKLQDRVLPDTFLESPQGKTVFFQTGFENSNVAVQKVSKWDDV

A0A5D3D5V1 Polyprotein1.7e-4863.16Show/hide
Query:  CGNGSQDM----------VTQNRRFYTMLNVGMIQIGVKTLTTKIPSNASIIVCVFDTRIIENFEDSVLGLVESKLSDGPMYFNVFPNITMSLFHPKLLE
        C NGSQ              Q +RF TMLN+GMIQIGVKTLTTKIPSNASII+CVFDTR  +NFEDS+LGLVE+KLSDGPM+FN+FPNITMSLFHPKL E
Subjt:  CGNGSQDM----------VTQNRRFYTMLNVGMIQIGVKTLTTKIPSNASIIVCVFDTRIIENFEDSVLGLVESKLSDGPMYFNVFPNITMSLFHPKLLE

Query:  AF--------------------LMWRSCYKLQDRVLPDTFLESPQGKTVFFQTGFENSNVAVQKVSKWDDV
        +                     LMWR+CYKLQ    P   +ESPQGKTVFFQT FENS VAVQKVS+WD+V
Subjt:  AF--------------------LMWRSCYKLQDRVLPDTFLESPQGKTVFFQTGFENSNVAVQKVSKWDDV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAACTTTTCTCAAAGCCTGTCGTAGTTCAAACCCTAGAGGAGAATCCCATGCTTTAGACCGTGAAGAATACATCAAAAAAGGCAAAAATCTACTGAATTGGAAGAT
CCCAAAAGTTCCCACATCCAAAATCTACAAAACAAATCCATTCACTTTCTTCTCCGATCCCTCCATCATAACCAAAGAAACAAACATCTCTTGTGGCAATGGCAGCCAAG
ATATGGTCACACAAAACAGGAGATTCTACACCATGCTAAATGTGGGGATGATCCAAATTGGAGTCAAAACATTGACAACCAAAATCCCCTCAAATGCCTCTATCATCGTA
TGCGTTTTCGACACTCGAATCATCGAAAATTTCGAGGATTCGGTGTTGGGGTTGGTTGAATCAAAATTGAGTGATGGCCCTATGTATTTCAATGTTTTTCCAAACATCAC
AATGTCTTTGTTTCATCCTAAGTTGTTGGAGGCCTTTTTGATGTGGAGGAGTTGTTACAAGCTCCAAGACAGGGTTTTGCCAGATACTTTCCTTGAGAGTCCACAAGGTA
AGACTGTTTTTTTTCAGACAGGTTTTGAGAATTCCAATGTTGCTGTTCAGAAGGTTTCAAAATGGGATGACGTTCATGGCAAATTGGTTGAAATTATTTCTCTTGAGAAA
TAA
mRNA sequenceShow/hide mRNA sequence
ATGGCAACTTTTCTCAAAGCCTGTCGTAGTTCAAACCCTAGAGGAGAATCCCATGCTTTAGACCGTGAAGAATACATCAAAAAAGGCAAAAATCTACTGAATTGGAAGAT
CCCAAAAGTTCCCACATCCAAAATCTACAAAACAAATCCATTCACTTTCTTCTCCGATCCCTCCATCATAACCAAAGAAACAAACATCTCTTGTGGCAATGGCAGCCAAG
ATATGGTCACACAAAACAGGAGATTCTACACCATGCTAAATGTGGGGATGATCCAAATTGGAGTCAAAACATTGACAACCAAAATCCCCTCAAATGCCTCTATCATCGTA
TGCGTTTTCGACACTCGAATCATCGAAAATTTCGAGGATTCGGTGTTGGGGTTGGTTGAATCAAAATTGAGTGATGGCCCTATGTATTTCAATGTTTTTCCAAACATCAC
AATGTCTTTGTTTCATCCTAAGTTGTTGGAGGCCTTTTTGATGTGGAGGAGTTGTTACAAGCTCCAAGACAGGGTTTTGCCAGATACTTTCCTTGAGAGTCCACAAGGTA
AGACTGTTTTTTTTCAGACAGGTTTTGAGAATTCCAATGTTGCTGTTCAGAAGGTTTCAAAATGGGATGACGTTCATGGCAAATTGGTTGAAATTATTTCTCTTGAGAAA
TAA
Protein sequenceShow/hide protein sequence
MATFLKACRSSNPRGESHALDREEYIKKGKNLLNWKIPKVPTSKIYKTNPFTFFSDPSIITKETNISCGNGSQDMVTQNRRFYTMLNVGMIQIGVKTLTTKIPSNASIIV
CVFDTRIIENFEDSVLGLVESKLSDGPMYFNVFPNITMSLFHPKLLEAFLMWRSCYKLQDRVLPDTFLESPQGKTVFFQTGFENSNVAVQKVSKWDDVHGKLVEIISLEK