; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0027378 (gene) of Chayote v1 genome

Gene IDSed0027378
OrganismSechium edule (Chayote v1)
DescriptionLate embryogenesis abundant protein
Genome locationLG05:5698734..5699429
RNA-Seq ExpressionSed0027378
SyntenySed0027378
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsIPR004864 - Late embryogenesis abundant protein, LEA_2 subgroup


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0042716.1 late embryogenesis abundant protein [Cucumis melo var. makuwa]1.2e-4251.66Show/hide
Query:  MAEESQTLYKPH-QISNEQKQQQKLPIYTHPNSTKAPNKCFIYVFSGFVFLAVAALIFSSILLRVNPPTLRLSSLSLSKFS---ANSTS--QSLHLIFTP
        M E+SQ+    H Q  ++  ++Q+L  +   +  ++ NKCFIY+FS FVFL+VA LIF+ I+LRVN P++ LS++S+ KFS   AN++S   SL L F+ 
Subjt:  MAEESQTLYKPH-QISNEQKQQQKLPIYTHPNSTKAPNKCFIYVFSGFVFLAVAALIFSSILLRVNPPTLRLSSLSLSKFS---ANSTS--QSLHLIFTP

Query:  QFALQNSNFGPFNFDNGSLAFTYAGAVVARSPTGPGRAEAKASKSLNVTVEANFATNVS-NFGVLNLTGFVNLRGRVRLIHVLRKTVSSEIACSVHLDLN
         F + NSNFGPFNFDNG++   Y G +     TG GRAEAK SK +NVTVE + A NVS + G+L+L+ FV LRGRVRLIHV R+ VSSEI+CS++LDLN
Subjt:  QFALQNSNFGPFNFDNGSLAFTYAGAVVARSPTGPGRAEAKASKSLNVTVEANFATNVS-NFGVLNLTGFVNLRGRVRLIHVLRKTVSSEIACSVHLDLN

Query:  SHRFLPHWLCE
        +H+   +W+CE
Subjt:  SHRFLPHWLCE

KAG6579535.1 Late embryogenesis abundant protein, partial [Cucurbita argyrosperma subsp. sororia]5.7e-4551.4Show/hide
Query:  MAEESQTL----YKPHQISNEQKQQQKLPIYTHPNSTKAPNKCFIYVFSGFVFLAVAALIFSSILLRVNPPTLRLSSLSLSKFS---ANSTSQSLHLIFT
        M ++SQ+     Y+ H  S+E+ Q + L  +      ++ NKCFIYVFS FVFL+VA LIF+ I+LRVN P L  SSLS++KFS    NS+S SL+L  T
Subjt:  MAEESQTL----YKPHQISNEQKQQQKLPIYTHPNSTKAPNKCFIYVFSGFVFLAVAALIFSSILLRVNPPTLRLSSLSLSKFS---ANSTSQSLHLIFT

Query:  PQFALQNSNFGPFNFDNGSLAFTYAGAVVARSPTGPGRAEAKASKSLNVTVEA---NFATNVSNFGVLNLTGFVNLRGRVRLIHVLRKTVSSEIACSVHL
         Q A+ NSNFGPFNFD+ S+ F YAGA+V ++ TG GR +AK +K++NVTV A   N + + +N  +LNL+ F NLRGRVRLIH+ R+  SSEI CS+ L
Subjt:  PQFALQNSNFGPFNFDNGSLAFTYAGAVVARSPTGPGRAEAKASKSLNVTVEA---NFATNVSNFGVLNLTGFVNLRGRVRLIHVLRKTVSSEIACSVHL

Query:  DLNSHRFLPHWLCE
        DLN+H+   +W+CE
Subjt:  DLNSHRFLPHWLCE

XP_008437349.1 PREDICTED: late embryogenesis abundant protein At1g64065 [Cucumis melo]9.2e-4351.66Show/hide
Query:  MAEESQTLYKPH-QISNEQKQQQKLPIYTHPNSTKAPNKCFIYVFSGFVFLAVAALIFSSILLRVNPPTLRLSSLSLSKFS---ANSTS--QSLHLIFTP
        M E+SQ+    H Q  ++  ++Q+L  +   +  ++ NKCFIY+FS FVFL+VA LIF+ I+LRVN P++ LS++S+ KFS   AN++S   SL L F+ 
Subjt:  MAEESQTLYKPH-QISNEQKQQQKLPIYTHPNSTKAPNKCFIYVFSGFVFLAVAALIFSSILLRVNPPTLRLSSLSLSKFS---ANSTS--QSLHLIFTP

Query:  QFALQNSNFGPFNFDNGSLAFTYAGAVVARSPTGPGRAEAKASKSLNVTVEANFATNVS-NFGVLNLTGFVNLRGRVRLIHVLRKTVSSEIACSVHLDLN
         F + NSNFGPFNFDNG++   Y G +     TG GRAEAK SK +NVTVE + A NVS + G+L+L+ FV LRGRVRLIHV R+ VSSEI+CS++LDLN
Subjt:  QFALQNSNFGPFNFDNGSLAFTYAGAVVARSPTGPGRAEAKASKSLNVTVEANFATNVS-NFGVLNLTGFVNLRGRVRLIHVLRKTVSSEIACSVHLDLN

Query:  SHRFLPHWLCE
        +H+   +W+CE
Subjt:  SHRFLPHWLCE

XP_022969774.1 uncharacterized protein LOC111468875 [Cucurbita maxima]1.0e-4653.27Show/hide
Query:  MAEESQTL----YKPHQISNEQKQQQKLPIYTHPNSTKAPNKCFIYVFSGFVFLAVAALIFSSILLRVNPPTLRLSSLSLSKFS---ANSTSQSLHLIFT
        MA++SQ+     YK H  S+E+ Q++ L  +      ++ NKCFIYVFS FVFL+VA LIF+ I+LRVN P L  SSLS++KFS    NS+S SL+L  T
Subjt:  MAEESQTL----YKPHQISNEQKQQQKLPIYTHPNSTKAPNKCFIYVFSGFVFLAVAALIFSSILLRVNPPTLRLSSLSLSKFS---ANSTSQSLHLIFT

Query:  PQFALQNSNFGPFNFDNGSLAFTYAGAVVARSPTGPGRAEAKASKSLNVTVEA---NFATNVSNFGVLNLTGFVNLRGRVRLIHVLRKTVSSEIACSVHL
         Q A+ NSNFGPFNFD  S+ F YAGA+V +S TG GRA+AK +K++NVTV+A   N + + +N  +LNL+ F NLRGRVRLIH+ R+  SSEI+CS+ L
Subjt:  PQFALQNSNFGPFNFDNGSLAFTYAGAVVARSPTGPGRAEAKASKSLNVTVEA---NFATNVSNFGVLNLTGFVNLRGRVRLIHVLRKTVSSEIACSVHL

Query:  DLNSHRFLPHWLCE
        DLN+H+   +W+CE
Subjt:  DLNSHRFLPHWLCE

XP_038875090.1 late embryogenesis abundant protein At1g64065 [Benincasa hispida]6.1e-4751.87Show/hide
Query:  MAEESQTL----YKPHQISNEQKQQQKLPIYTHPNSTKAPNKCFIYVFSGFVFLAVAALIFSSILLRVNPPTLRLSSLSLSKFS---ANSTSQSLHLIFT
        M E+SQ+     Y+ H  S+E++Q           S    NKCFIYVFS FVFL+VA LIF+ I+LRVN P+++LSS+S+ KFS   ANS+S SL+L   
Subjt:  MAEESQTL----YKPHQISNEQKQQQKLPIYTHPNSTKAPNKCFIYVFSGFVFLAVAALIFSSILLRVNPPTLRLSSLSLSKFS---ANSTSQSLHLIFT

Query:  PQFALQNSNFGPFNFDNGSLAFTYAGAVVARSPTGPGRAEAKASKSLNVTVEA---NFATNVSNFGVLNLTGFVNLRGRVRLIHVLRKTVSSEIACSVHL
         +F + NSNFGPFNFDNG++   Y GA+V    TG GRAEAK SK +NVT+EA   N +++ +N G+LNL  FV LRGRVRLIH+ R+  SSEI CS++L
Subjt:  PQFALQNSNFGPFNFDNGSLAFTYAGAVVARSPTGPGRAEAKASKSLNVTVEA---NFATNVSNFGVLNLTGFVNLRGRVRLIHVLRKTVSSEIACSVHL

Query:  DLNSHRFLPHWLCE
        D+N+H+   +W+CE
Subjt:  DLNSHRFLPHWLCE

TrEMBL top hitse value%identityAlignment
A0A0A0KQT7 LEA_2 domain-containing protein1.7e-4250.47Show/hide
Query:  MAEESQTL----YKPHQISNEQKQQQKLPIYTHPNSTKAPNKCFIYVFSGFVFLAVAALIFSSILLRVNPPTLRLSSL-----SLSKFSANSTSQSLHLI
        M E+SQ+     Y+ H   NE++Q     I     S    NKCFIY+FS FVFL+VA LIF+ I+LRVN P++ LSS+     SLS  + +S+  SL+L 
Subjt:  MAEESQTL----YKPHQISNEQKQQQKLPIYTHPNSTKAPNKCFIYVFSGFVFLAVAALIFSSILLRVNPPTLRLSSL-----SLSKFSANSTSQSLHLI

Query:  FTPQFALQNSNFGPFNFDNGSLAFTYAGAVVARSPTGPGRAEAKASKSLNVTVEANFATNVS-NFGVLNLTGFVNLRGRVRLIHVLRKTVSSEIACSVHL
        F  +F + NSNFGPFNFDNG++   Y G +     TG GRA AK SK +NVTVE + A NVS + G+LN + FV LRGRVRLIH+ R+ VSSEI+CS++L
Subjt:  FTPQFALQNSNFGPFNFDNGSLAFTYAGAVVARSPTGPGRAEAKASKSLNVTVEANFATNVS-NFGVLNLTGFVNLRGRVRLIHVLRKTVSSEIACSVHL

Query:  DLNSHRFLPHWLCE
        DLN+H+   +W+CE
Subjt:  DLNSHRFLPHWLCE

A0A1S3ATY3 late embryogenesis abundant protein At1g640654.4e-4351.66Show/hide
Query:  MAEESQTLYKPH-QISNEQKQQQKLPIYTHPNSTKAPNKCFIYVFSGFVFLAVAALIFSSILLRVNPPTLRLSSLSLSKFS---ANSTS--QSLHLIFTP
        M E+SQ+    H Q  ++  ++Q+L  +   +  ++ NKCFIY+FS FVFL+VA LIF+ I+LRVN P++ LS++S+ KFS   AN++S   SL L F+ 
Subjt:  MAEESQTLYKPH-QISNEQKQQQKLPIYTHPNSTKAPNKCFIYVFSGFVFLAVAALIFSSILLRVNPPTLRLSSLSLSKFS---ANSTS--QSLHLIFTP

Query:  QFALQNSNFGPFNFDNGSLAFTYAGAVVARSPTGPGRAEAKASKSLNVTVEANFATNVS-NFGVLNLTGFVNLRGRVRLIHVLRKTVSSEIACSVHLDLN
         F + NSNFGPFNFDNG++   Y G +     TG GRAEAK SK +NVTVE + A NVS + G+L+L+ FV LRGRVRLIHV R+ VSSEI+CS++LDLN
Subjt:  QFALQNSNFGPFNFDNGSLAFTYAGAVVARSPTGPGRAEAKASKSLNVTVEANFATNVS-NFGVLNLTGFVNLRGRVRLIHVLRKTVSSEIACSVHLDLN

Query:  SHRFLPHWLCE
        +H+   +W+CE
Subjt:  SHRFLPHWLCE

A0A5A7TL68 Late embryogenesis abundant protein5.8e-4351.66Show/hide
Query:  MAEESQTLYKPH-QISNEQKQQQKLPIYTHPNSTKAPNKCFIYVFSGFVFLAVAALIFSSILLRVNPPTLRLSSLSLSKFS---ANSTS--QSLHLIFTP
        M E+SQ+    H Q  ++  ++Q+L  +   +  ++ NKCFIY+FS FVFL+VA LIF+ I+LRVN P++ LS++S+ KFS   AN++S   SL L F+ 
Subjt:  MAEESQTLYKPH-QISNEQKQQQKLPIYTHPNSTKAPNKCFIYVFSGFVFLAVAALIFSSILLRVNPPTLRLSSLSLSKFS---ANSTS--QSLHLIFTP

Query:  QFALQNSNFGPFNFDNGSLAFTYAGAVVARSPTGPGRAEAKASKSLNVTVEANFATNVS-NFGVLNLTGFVNLRGRVRLIHVLRKTVSSEIACSVHLDLN
         F + NSNFGPFNFDNG++   Y G +     TG GRAEAK SK +NVTVE + A NVS + G+L+L+ FV LRGRVRLIHV R+ VSSEI+CS++LDLN
Subjt:  QFALQNSNFGPFNFDNGSLAFTYAGAVVARSPTGPGRAEAKASKSLNVTVEANFATNVS-NFGVLNLTGFVNLRGRVRLIHVLRKTVSSEIACSVHLDLN

Query:  SHRFLPHWLCE
        +H+   +W+CE
Subjt:  SHRFLPHWLCE

A0A6J1H2C0 uncharacterized protein LOC1114597391.2e-4047.62Show/hide
Query:  MAEESQTLYKPHQISNEQKQQQKLPIYTHPNSTKAPNKCFIYVFSGFVFLAVAALIFSSILLRVNPPTLRLSSLSLSKFS---ANSTSQSLHLIFTPQFA
        M E S +   PH      +   K P        +  NKCFIY+FS FVFL VA LIFS I+LRVN PT+ LSS+S+ KFS    NS+S SL+L    +F+
Subjt:  MAEESQTLYKPHQISNEQKQQQKLPIYTHPNSTKAPNKCFIYVFSGFVFLAVAALIFSSILLRVNPPTLRLSSLSLSKFS---ANSTSQSLHLIFTPQFA

Query:  LQNSNFGPFNFDNGSLAFTYAGAVVARSPTGPGRAEAKASKSLNVTVEA---NFATNVSNFGVLNLTGFVNLRGRVRLIHVLRKTVSSEIACSVHLDLNS
        L NSNFGPF FD  ++ F Y G +V    TG GRAEAK +  +NV+VEA   N +++++  G+LN++ F    GR+ LIHVLRK + SEI+CS++LDLN+
Subjt:  LQNSNFGPFNFDNGSLAFTYAGAVVARSPTGPGRAEAKASKSLNVTVEA---NFATNVSNFGVLNLTGFVNLRGRVRLIHVLRKTVSSEIACSVHLDLNS

Query:  HRFLPHWLCE
        H+  P W+C+
Subjt:  HRFLPHWLCE

A0A6J1I3M2 uncharacterized protein LOC1114688755.1e-4753.27Show/hide
Query:  MAEESQTL----YKPHQISNEQKQQQKLPIYTHPNSTKAPNKCFIYVFSGFVFLAVAALIFSSILLRVNPPTLRLSSLSLSKFS---ANSTSQSLHLIFT
        MA++SQ+     YK H  S+E+ Q++ L  +      ++ NKCFIYVFS FVFL+VA LIF+ I+LRVN P L  SSLS++KFS    NS+S SL+L  T
Subjt:  MAEESQTL----YKPHQISNEQKQQQKLPIYTHPNSTKAPNKCFIYVFSGFVFLAVAALIFSSILLRVNPPTLRLSSLSLSKFS---ANSTSQSLHLIFT

Query:  PQFALQNSNFGPFNFDNGSLAFTYAGAVVARSPTGPGRAEAKASKSLNVTVEA---NFATNVSNFGVLNLTGFVNLRGRVRLIHVLRKTVSSEIACSVHL
         Q A+ NSNFGPFNFD  S+ F YAGA+V +S TG GRA+AK +K++NVTV+A   N + + +N  +LNL+ F NLRGRVRLIH+ R+  SSEI+CS+ L
Subjt:  PQFALQNSNFGPFNFDNGSLAFTYAGAVVARSPTGPGRAEAKASKSLNVTVEA---NFATNVSNFGVLNLTGFVNLRGRVRLIHVLRKTVSSEIACSVHL

Query:  DLNSHRFLPHWLCE
        DLN+H+   +W+CE
Subjt:  DLNSHRFLPHWLCE

SwissProt top hitse value%identityAlignment
Q6DST1 Late embryogenesis abundant protein At1g640651.6e-1026.27Show/hide
Query:  MAEESQTLYKPHQISNEQKQQQKLPIYTHPNSTKAPNKCFIYVFSGFVFLAVAALIFSSILLRVNPPTLRLSSLSLS--KFSANSTSQSLHLIFTPQFAL
        M +E +    P +I     ++Q  P      + + P KC +Y  +  V +    LI SSI LR++ P +   S+S    +   NST+   +       ++
Subjt:  MAEESQTLYKPHQISNEQKQQQKLPIYTHPNSTKAPNKCFIYVFSGFVFLAVAALIFSSILLRVNPPTLRLSSLSLS--KFSANSTSQSLHLIFTPQFAL

Query:  QNSNFGPFNFDNGSLAFTYAGAVVARSPTGPGRAEAKASKSLNVT-----------VEANFATNVSNFGVLNLTGFVNLRGRVRLIHVLRKTVSSEIACS
        +NSNFG F F++ +L   YA   V       GR   +A K++ +T           ++          G L L     +RGR++++   R  V S ++C+
Subjt:  QNSNFGPFNFDNGSLAFTYAGAVVARSPTGPGRAEAKASKSLNVT-----------VEANFATNVSNFGVLNLTGFVNLRGRVRLIHVLRKTVSSEIACS

Query:  VHLDLNSHRFLPHWLCE
        + L+L   RF+ + LCE
Subjt:  VHLDLNSHRFLPHWLCE

Arabidopsis top hitse value%identityAlignment
AT1G64065.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family1.2e-1126.27Show/hide
Query:  MAEESQTLYKPHQISNEQKQQQKLPIYTHPNSTKAPNKCFIYVFSGFVFLAVAALIFSSILLRVNPPTLRLSSLSLS--KFSANSTSQSLHLIFTPQFAL
        M +E +    P +I     ++Q  P      + + P KC +Y  +  V +    LI SSI LR++ P +   S+S    +   NST+   +       ++
Subjt:  MAEESQTLYKPHQISNEQKQQQKLPIYTHPNSTKAPNKCFIYVFSGFVFLAVAALIFSSILLRVNPPTLRLSSLSLS--KFSANSTSQSLHLIFTPQFAL

Query:  QNSNFGPFNFDNGSLAFTYAGAVVARSPTGPGRAEAKASKSLNVT-----------VEANFATNVSNFGVLNLTGFVNLRGRVRLIHVLRKTVSSEIACS
        +NSNFG F F++ +L   YA   V       GR   +A K++ +T           ++          G L L     +RGR++++   R  V S ++C+
Subjt:  QNSNFGPFNFDNGSLAFTYAGAVVARSPTGPGRAEAKASKSLNVT-----------VEANFATNVSNFGVLNLTGFVNLRGRVRLIHVLRKTVSSEIACS

Query:  VHLDLNSHRFLPHWLCE
        + L+L   RF+ + LCE
Subjt:  VHLDLNSHRFLPHWLCE

AT2G46150.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family4.7e-0519.53Show/hide
Query:  KCFIYVFSGFVFLAVAALIFSSILLRVNPPTLRLSSLSLSKFSANSTSQSLHLIFT-----PQFALQNSNFGPFNFDNGSLAFTYAGAVVARSPTGPGRA
        KC I V +  + L    L     + RV  P ++++ + ++   + + +  + L+ T        +++N N   F + N +    Y G +V  +   PG+A
Subjt:  KCFIYVFSGFVFLAVAALIFSSILLRVNPPTLRLSSLSLSKFSANSTSQSLHLIFT-----PQFALQNSNFGPFNFDNGSLAFTYAGAVVARSPTGPGRA

Query:  EAKASKSLNVTV---------EANFATNVSNFGVLNLTGFVNLRGRVRLIHVLRKTVSSEIACSVHLDL
            +  +NVTV         +      +S  G++N+  +  + G+V+++ +++K V+ ++ C++ +++
Subjt:  EAKASKSLNVTV---------EANFATNVSNFGVLNLTGFVNLRGRVRLIHVLRKTVSSEIACSVHLDL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGAAGAGAGCCAAACACTCTACAAACCTCACCAAATATCCAACGAACAAAAACAGCAGCAAAAACTCCCCATATACACCCATCCAAACAGCACCAAAGCCCCCAA
CAAATGCTTCATCTACGTCTTCTCCGGCTTCGTGTTCCTCGCCGTCGCCGCCTTGATCTTCTCCTCCATCCTCCTCCGCGTCAACCCCCCCACCCTCCGCCTCTCCTCCC
TCTCCCTCTCCAAATTCTCCGCTAATTCCACTTCCCAATCGCTCCATCTCATCTTCACCCCCCAATTCGCTCTCCAAAATTCCAATTTCGGCCCCTTCAACTTCGACAAC
GGCTCCCTCGCCTTCACCTACGCCGGCGCCGTCGTCGCCCGGAGCCCCACCGGCCCCGGCAGGGCGGAGGCGAAGGCCTCCAAGAGCTTGAATGTTACCGTGGAGGCCAA
TTTCGCGACCAATGTGAGCAATTTTGGGGTTTTGAATTTGACTGGGTTTGTGAATTTGAGAGGCAGAGTCCGATTGATTCATGTTTTGAGGAAGACTGTTTCGTCGGAGA
TTGCTTGTTCTGTTCATCTCGATTTGAATTCTCATCGATTTCTGCCTCATTGGCTTTGCGAATAA
mRNA sequenceShow/hide mRNA sequence
CAACTTCAGGCCTCCAAAAACAGAATCTCTGTCTGTCTAAAACCAAACTCTGTTTTTCTCTGTTCTGCTCTGCATCAACAATGGCGGAAGAGAGCCAAACACTCTACAAA
CCTCACCAAATATCCAACGAACAAAAACAGCAGCAAAAACTCCCCATATACACCCATCCAAACAGCACCAAAGCCCCCAACAAATGCTTCATCTACGTCTTCTCCGGCTT
CGTGTTCCTCGCCGTCGCCGCCTTGATCTTCTCCTCCATCCTCCTCCGCGTCAACCCCCCCACCCTCCGCCTCTCCTCCCTCTCCCTCTCCAAATTCTCCGCTAATTCCA
CTTCCCAATCGCTCCATCTCATCTTCACCCCCCAATTCGCTCTCCAAAATTCCAATTTCGGCCCCTTCAACTTCGACAACGGCTCCCTCGCCTTCACCTACGCCGGCGCC
GTCGTCGCCCGGAGCCCCACCGGCCCCGGCAGGGCGGAGGCGAAGGCCTCCAAGAGCTTGAATGTTACCGTGGAGGCCAATTTCGCGACCAATGTGAGCAATTTTGGGGT
TTTGAATTTGACTGGGTTTGTGAATTTGAGAGGCAGAGTCCGATTGATTCATGTTTTGAGGAAGACTGTTTCGTCGGAGATTGCTTGTTCTGTTCATCTCGATTTGAATT
CTCATCGATTTCTGCCTCATTGGCTTTGCGAATAAT
Protein sequenceShow/hide protein sequence
MAEESQTLYKPHQISNEQKQQQKLPIYTHPNSTKAPNKCFIYVFSGFVFLAVAALIFSSILLRVNPPTLRLSSLSLSKFSANSTSQSLHLIFTPQFALQNSNFGPFNFDN
GSLAFTYAGAVVARSPTGPGRAEAKASKSLNVTVEANFATNVSNFGVLNLTGFVNLRGRVRLIHVLRKTVSSEIACSVHLDLNSHRFLPHWLCE