; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0027411 (gene) of Chayote v1 genome

Gene IDSed0027411
OrganismSechium edule (Chayote v1)
DescriptionGlycine-rich RNA-binding family protein
Genome locationLG03:3800139..3804501
RNA-Seq ExpressionSed0027411
SyntenySed0027411
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR001878 - Zinc finger, CCHC-type
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily
IPR036875 - Zinc finger, CCHC-type superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6602289.1 Glycine-rich RNA-binding protein RZ1C, partial [Cucurbita argyrosperma subsp. sororia]2.6e-13988.66Show/hide
Query:  MAGKDEYRIFVGGLSSSVSERQLESAFSRYGKILETQIMLERDTGRPRGFGFLTFADRRGMDDAIREMHGHELGERTITVNKAEPKMEGDNSESGFRRGG
        MA KDEYRIFVGGLS +VSER+LE+AFSRYGKI+ETQIMLERDTGRPRGFGF+TFADRRGMDDAIREMHGHE GER I+VNKAEPKMEGD+ E GFR GG
Subjt:  MAGKDEYRIFVGGLSSSVSERQLESAFSRYGKILETQIMLERDTGRPRGFGFLTFADRRGMDDAIREMHGHELGERTITVNKAEPKMEGDNSESGFRRGG

Query:  YSSGGRASFGRGGDRSVGQDECFKCGRPGHWARDCPSAGGGVRGRVGDSFSLRSRFDSDGRGDRFGEDRDRYIDDRYDLGRDGGRYGDRDRFDRRDDKYG
        YSSGGRASFGRGGDRSVGQDECFKCGRPGHWARDCPSAGGG RGR   SFS RSRFD D RGDRFG DRDRY+DDRYD GRDGGRYGDRDRFDRRDDKYG
Subjt:  YSSGGRASFGRGGDRSVGQDECFKCGRPGHWARDCPSAGGGVRGRVGDSFSLRSRFDSDGRGDRFGEDRDRYIDDRYDLGRDGGRYGDRDRFDRRDDKYG

Query:  SRDRYFDDRYPSAGDRFAGGGDRYDVSDRNPQNGYAKDRGSYGRDIGPRSGSDRYGS-GGPARYEGRSLRDRPGPYDRPSRGGRPSSYERY
        SRDRYFDDRYPSAGDRFA GGDRYDVSDR PQNGY KDRG Y RDIGPRSGSDRYG+ GGP RYEGRS RDRPGPYDRPSRGGRPSSYERY
Subjt:  SRDRYFDDRYPSAGDRFAGGGDRYDVSDRNPQNGYAKDRGSYGRDIGPRSGSDRYGS-GGPARYEGRSLRDRPGPYDRPSRGGRPSSYERY

XP_022133790.1 glycine-rich RNA-binding protein RZ1C-like isoform X1 [Momordica charantia]4.1e-13787.93Show/hide
Query:  MAGKDEYRIFVGGLSSSVSERQLESAFSRYGKILETQIMLERDTGRPRGFGFLTFADRRGMDDAIREMHGHELGERTITVNKAEPKMEGDNSESGFRRGG
        MAGKDEYRIFVGGLS ++SERQLE+AFSRYGKILETQIMLERDTGRPRGFGF+TFADRRGMDDAIREMHG ELGERTI+VNKAEPKMEGD+ E GFR GG
Subjt:  MAGKDEYRIFVGGLSSSVSERQLESAFSRYGKILETQIMLERDTGRPRGFGFLTFADRRGMDDAIREMHGHELGERTITVNKAEPKMEGDNSESGFRRGG

Query:  YSSGGRASFGRGGDRSVGQDECFKCGRPGHWARDCPSAGGGVRGRVGDSFSLRSRFDSDGRGDRFGEDRDRYIDDRYDLGRDGGRYGDRDRFDRRDDKYG
        YSSGGR SFGRGGDRSVGQDECFKCGRPGHWARDCPS GGG RGR   SFS RSRFDSD RGDRFG DRDRY+DDRY    DGGRYGDRD FDRRDDKYG
Subjt:  YSSGGRASFGRGGDRSVGQDECFKCGRPGHWARDCPSAGGGVRGRVGDSFSLRSRFDSDGRGDRFGEDRDRYIDDRYDLGRDGGRYGDRDRFDRRDDKYG

Query:  SRDRYFDDRYPSAGDRFAGGGDRYDVSDRNPQNGYAKDRGSYGRDIGPRSGSDRYGSGGPARYEGRSLRDRPGPYDRPSRGGRPSSYERY
        SRDRYFDDRYPS GDRFA GGDRYDVSDR PQNGY KDRG Y RDIGPRSGSDRYGSGGP RYEGRS RDR GPYDRPSRGGRPSSYERY
Subjt:  SRDRYFDDRYPSAGDRFAGGGDRYDVSDRNPQNGYAKDRGSYGRDIGPRSGSDRYGSGGPARYEGRSLRDRPGPYDRPSRGGRPSSYERY

XP_022961758.1 glycine-rich RNA-binding protein RZ1C-like [Cucurbita moschata]7.4e-13988.32Show/hide
Query:  MAGKDEYRIFVGGLSSSVSERQLESAFSRYGKILETQIMLERDTGRPRGFGFLTFADRRGMDDAIREMHGHELGERTITVNKAEPKMEGDNSESGFRRGG
        MA KDEYRIFVGGLS +VSER+LE+AFSRYGKI+ETQIMLERDTGRPRGFGF+TFADRRGMDDAIREMHGHE GER I+VNKAEPKMEGD+ E GFR GG
Subjt:  MAGKDEYRIFVGGLSSSVSERQLESAFSRYGKILETQIMLERDTGRPRGFGFLTFADRRGMDDAIREMHGHELGERTITVNKAEPKMEGDNSESGFRRGG

Query:  YSSGGRASFGRGGDRSVGQDECFKCGRPGHWARDCPSAGGGVRGRVGDSFSLRSRFDSDGRGDRFGEDRDRYIDDRYDLGRDGGRYGDRDRFDRRDDKYG
        YSSGGRASFGRGGDRSVGQDECFKCGRPGHWARDCPSAGGG RGR   SFS RSRFD D RGDRFG DRDRY+DDRYD GRDGGRYGDRDRFDRRDDKYG
Subjt:  YSSGGRASFGRGGDRSVGQDECFKCGRPGHWARDCPSAGGGVRGRVGDSFSLRSRFDSDGRGDRFGEDRDRYIDDRYDLGRDGGRYGDRDRFDRRDDKYG

Query:  SRDRYFDDRYPSAGDRFAGGGDRYDVSDRNPQNGYAKDRGSYGRDIGPRSGSDRYGS-GGPARYEGRSLRDRPGPYDRPSRGGRPSSYERY
        SRDRYFDDRYPSAGDRF  GGDRYDVSDR PQNGY KDRG Y RDIGPRSGSDRYG+ GGP RYEGRS RDRPGPYDRPSRGGRPSSYERY
Subjt:  SRDRYFDDRYPSAGDRFAGGGDRYDVSDRNPQNGYAKDRGSYGRDIGPRSGSDRYGS-GGPARYEGRSLRDRPGPYDRPSRGGRPSSYERY

XP_022990423.1 glycine-rich RNA-binding protein RZ1C [Cucurbita maxima]5.7e-13988.32Show/hide
Query:  MAGKDEYRIFVGGLSSSVSERQLESAFSRYGKILETQIMLERDTGRPRGFGFLTFADRRGMDDAIREMHGHELGERTITVNKAEPKMEGDNSESGFRRGG
        MA KDEYRIFVGGLS +VSER+LE+AFSRYGKI+ETQIMLERDTGRPRGFGF+TFADRRGMDDAIREMHGHE GER I+VNKAEPKMEGD+ E GFR GG
Subjt:  MAGKDEYRIFVGGLSSSVSERQLESAFSRYGKILETQIMLERDTGRPRGFGFLTFADRRGMDDAIREMHGHELGERTITVNKAEPKMEGDNSESGFRRGG

Query:  YSSGGRASFGRGGDRSVGQDECFKCGRPGHWARDCPSAGGGVRGRVGDSFSLRSRFDSDGRGDRFGEDRDRYIDDRYDLGRDGGRYGDRDRFDRRDDKYG
        YSSGGRASFGRGGDRSVGQDECFKCGRPGHWARDCPSAGGG RGR   SFS RSRFD D RGDRFG DRDRY+DDRYD GRDGGRYGDRDRFDRRDDKYG
Subjt:  YSSGGRASFGRGGDRSVGQDECFKCGRPGHWARDCPSAGGGVRGRVGDSFSLRSRFDSDGRGDRFGEDRDRYIDDRYDLGRDGGRYGDRDRFDRRDDKYG

Query:  SRDRYFDDRYPSAGDRFAGGGDRYDVSDRNPQNGYAKDRGSYGRDIGPRSGSDRYGS-GGPARYEGRSLRDRPGPYDRPSRGGRPSSYERY
        SRDRYFDDRYPSAGDRFA GGDRYDVSDR PQNGY KDRG Y RDIGPRSGSDRYG+ GGP RYEGR+ RDRPGPYDRPSRGGRPSSYERY
Subjt:  SRDRYFDDRYPSAGDRFAGGGDRYDVSDRNPQNGYAKDRGSYGRDIGPRSGSDRYGS-GGPARYEGRSLRDRPGPYDRPSRGGRPSSYERY

XP_023544240.1 glycine-rich RNA-binding protein RZ1C [Cucurbita pepo subsp. pepo]6.3e-13887.63Show/hide
Query:  MAGKDEYRIFVGGLSSSVSERQLESAFSRYGKILETQIMLERDTGRPRGFGFLTFADRRGMDDAIREMHGHELGERTITVNKAEPKMEGDNSESGFRRGG
        MA KDEYRIFVGGLS +VSER+LE+AFSRYGKI+ETQIMLERDTGRPRGFGF+TFADRRGMDDAIREMHGHE GER I+VNKAEPKMEGD+ E GFR GG
Subjt:  MAGKDEYRIFVGGLSSSVSERQLESAFSRYGKILETQIMLERDTGRPRGFGFLTFADRRGMDDAIREMHGHELGERTITVNKAEPKMEGDNSESGFRRGG

Query:  YSSGGRASFGRGGDRSVGQDECFKCGRPGHWARDCPSAGGGVRGRVGDSFSLRSRFDSDGRGDRFGEDRDRYIDDRYDLGRDGGRYGDRDRFDRRDDKYG
        YSSGGRASFGRGGDRSVGQDECFKCGRPGHWARDCPS GGG RGR   SFS RSRFD D RGDRFG DRDRY+DDRYD GRDGGRYGDRDRFDRRDDKYG
Subjt:  YSSGGRASFGRGGDRSVGQDECFKCGRPGHWARDCPSAGGGVRGRVGDSFSLRSRFDSDGRGDRFGEDRDRYIDDRYDLGRDGGRYGDRDRFDRRDDKYG

Query:  SRDRYFDDRYPSAGDRFAGGGDRYDVSDRNPQNGYAKDRGSYGRDIGPRSGSDRYGS-GGPARYEGRSLRDRPGPYDRPSRGGRPSSYERY
        SRDRYF+DRYPSAGDRFA GGDRYDVSDR PQNGY K+RG Y RDIGPRSGSDRYG+ GGP RYEGRS RDRPGPYDRPSRGGRPSSYERY
Subjt:  SRDRYFDDRYPSAGDRFAGGGDRYDVSDRNPQNGYAKDRGSYGRDIGPRSGSDRYGS-GGPARYEGRSLRDRPGPYDRPSRGGRPSSYERY

TrEMBL top hitse value%identityAlignment
A0A0A0LQB5 Uncharacterized protein5.8e-12984.14Show/hide
Query:  MAGKDEYRIFVGGLSSSVSERQLESAFSRYGKILETQIMLERDTGRPRGFGFLTFADRRGMDDAIREMHGHELGERTITVNKAEPKMEGDNSESGFRRGG
        MA KDEYRIFVGGLS ++SERQLE+AF R+GK+LETQIMLERDTGRPRGFGF+TFADRRGMDDAIREMHG ELGER I+VNKAEPKMEGD++E GFR GG
Subjt:  MAGKDEYRIFVGGLSSSVSERQLESAFSRYGKILETQIMLERDTGRPRGFGFLTFADRRGMDDAIREMHGHELGERTITVNKAEPKMEGDNSESGFRRGG

Query:  YSSGGRASFGRGGDRSVGQDECFKCGRPGHWARDCPSAGGGVRGRVGDSFSLRSRFDSDGRGDRFGEDRDRYIDDRYDLGRDGGRYGDRDRFDRRDDKYG
        YSSGGRASFGRG DRSVGQDECFKCGRPGHWARDCPS GGG RG    SFS RSRFDSDGRGDRFG DRDRY+D+RY    +GGRYGDRDRFDRRDDKYG
Subjt:  YSSGGRASFGRGGDRSVGQDECFKCGRPGHWARDCPSAGGGVRGRVGDSFSLRSRFDSDGRGDRFGEDRDRYIDDRYDLGRDGGRYGDRDRFDRRDDKYG

Query:  SRDRYFDDRYPSAGDRFAGGGDRYDVSDRNPQNGYAKDRGSYGRDIGPRSGSDRYGSGGPARYEGRSLRDRPGPYDRPSRGGRPSSYERY
        SRDRYFDDRYPSAGDRF  G DRYDVSDR PQNGY KDR  Y RDIGPRSGSDRYGSGGP R+EGRS RDR GPYDRPSR GRPSSY+RY
Subjt:  SRDRYFDDRYPSAGDRFAGGGDRYDVSDRNPQNGYAKDRGSYGRDIGPRSGSDRYGSGGPARYEGRSLRDRPGPYDRPSRGGRPSSYERY

A0A6J1BW59 glycine-rich RNA-binding protein RZ1C-like isoform X21.7e-11787.7Show/hide
Query:  MLERDTGRPRGFGFLTFADRRGMDDAIREMHGHELGERTITVNKAEPKMEGDNSESGFRRGGYSSGGRASFGRGGDRSVGQDECFKCGRPGHWARDCPSA
        MLERDTGRPRGFGF+TFADRRGMDDAIREMHG ELGERTI+VNKAEPKMEGD+ E GFR GGYSSGGR SFGRGGDRSVGQDECFKCGRPGHWARDCPS 
Subjt:  MLERDTGRPRGFGFLTFADRRGMDDAIREMHGHELGERTITVNKAEPKMEGDNSESGFRRGGYSSGGRASFGRGGDRSVGQDECFKCGRPGHWARDCPSA

Query:  GGGVRGRVGDSFSLRSRFDSDGRGDRFGEDRDRYIDDRYDLGRDGGRYGDRDRFDRRDDKYGSRDRYFDDRYPSAGDRFAGGGDRYDVSDRNPQNGYAKD
        GGG RGR   SFS RSRFDSD RGDRFG DRDRY+DDRY    DGGRYGDRD FDRRDDKYGSRDRYFDDRYPS GDRFA GGDRYDVSDR PQNGY KD
Subjt:  GGGVRGRVGDSFSLRSRFDSDGRGDRFGEDRDRYIDDRYDLGRDGGRYGDRDRFDRRDDKYGSRDRYFDDRYPSAGDRFAGGGDRYDVSDRNPQNGYAKD

Query:  RGSYGRDIGPRSGSDRYGSGGPARYEGRSLRDRPGPYDRPSRGGRPSSYERY
        RG Y RDIGPRSGSDRYGSGGP RYEGRS RDR GPYDRPSRGGRPSSYERY
Subjt:  RGSYGRDIGPRSGSDRYGSGGPARYEGRSLRDRPGPYDRPSRGGRPSSYERY

A0A6J1BW89 glycine-rich RNA-binding protein RZ1C-like isoform X12.0e-13787.93Show/hide
Query:  MAGKDEYRIFVGGLSSSVSERQLESAFSRYGKILETQIMLERDTGRPRGFGFLTFADRRGMDDAIREMHGHELGERTITVNKAEPKMEGDNSESGFRRGG
        MAGKDEYRIFVGGLS ++SERQLE+AFSRYGKILETQIMLERDTGRPRGFGF+TFADRRGMDDAIREMHG ELGERTI+VNKAEPKMEGD+ E GFR GG
Subjt:  MAGKDEYRIFVGGLSSSVSERQLESAFSRYGKILETQIMLERDTGRPRGFGFLTFADRRGMDDAIREMHGHELGERTITVNKAEPKMEGDNSESGFRRGG

Query:  YSSGGRASFGRGGDRSVGQDECFKCGRPGHWARDCPSAGGGVRGRVGDSFSLRSRFDSDGRGDRFGEDRDRYIDDRYDLGRDGGRYGDRDRFDRRDDKYG
        YSSGGR SFGRGGDRSVGQDECFKCGRPGHWARDCPS GGG RGR   SFS RSRFDSD RGDRFG DRDRY+DDRY    DGGRYGDRD FDRRDDKYG
Subjt:  YSSGGRASFGRGGDRSVGQDECFKCGRPGHWARDCPSAGGGVRGRVGDSFSLRSRFDSDGRGDRFGEDRDRYIDDRYDLGRDGGRYGDRDRFDRRDDKYG

Query:  SRDRYFDDRYPSAGDRFAGGGDRYDVSDRNPQNGYAKDRGSYGRDIGPRSGSDRYGSGGPARYEGRSLRDRPGPYDRPSRGGRPSSYERY
        SRDRYFDDRYPS GDRFA GGDRYDVSDR PQNGY KDRG Y RDIGPRSGSDRYGSGGP RYEGRS RDR GPYDRPSRGGRPSSYERY
Subjt:  SRDRYFDDRYPSAGDRFAGGGDRYDVSDRNPQNGYAKDRGSYGRDIGPRSGSDRYGSGGPARYEGRSLRDRPGPYDRPSRGGRPSSYERY

A0A6J1HB93 glycine-rich RNA-binding protein RZ1C-like3.6e-13988.32Show/hide
Query:  MAGKDEYRIFVGGLSSSVSERQLESAFSRYGKILETQIMLERDTGRPRGFGFLTFADRRGMDDAIREMHGHELGERTITVNKAEPKMEGDNSESGFRRGG
        MA KDEYRIFVGGLS +VSER+LE+AFSRYGKI+ETQIMLERDTGRPRGFGF+TFADRRGMDDAIREMHGHE GER I+VNKAEPKMEGD+ E GFR GG
Subjt:  MAGKDEYRIFVGGLSSSVSERQLESAFSRYGKILETQIMLERDTGRPRGFGFLTFADRRGMDDAIREMHGHELGERTITVNKAEPKMEGDNSESGFRRGG

Query:  YSSGGRASFGRGGDRSVGQDECFKCGRPGHWARDCPSAGGGVRGRVGDSFSLRSRFDSDGRGDRFGEDRDRYIDDRYDLGRDGGRYGDRDRFDRRDDKYG
        YSSGGRASFGRGGDRSVGQDECFKCGRPGHWARDCPSAGGG RGR   SFS RSRFD D RGDRFG DRDRY+DDRYD GRDGGRYGDRDRFDRRDDKYG
Subjt:  YSSGGRASFGRGGDRSVGQDECFKCGRPGHWARDCPSAGGGVRGRVGDSFSLRSRFDSDGRGDRFGEDRDRYIDDRYDLGRDGGRYGDRDRFDRRDDKYG

Query:  SRDRYFDDRYPSAGDRFAGGGDRYDVSDRNPQNGYAKDRGSYGRDIGPRSGSDRYGS-GGPARYEGRSLRDRPGPYDRPSRGGRPSSYERY
        SRDRYFDDRYPSAGDRF  GGDRYDVSDR PQNGY KDRG Y RDIGPRSGSDRYG+ GGP RYEGRS RDRPGPYDRPSRGGRPSSYERY
Subjt:  SRDRYFDDRYPSAGDRFAGGGDRYDVSDRNPQNGYAKDRGSYGRDIGPRSGSDRYGS-GGPARYEGRSLRDRPGPYDRPSRGGRPSSYERY

A0A6J1JS04 glycine-rich RNA-binding protein RZ1C2.8e-13988.32Show/hide
Query:  MAGKDEYRIFVGGLSSSVSERQLESAFSRYGKILETQIMLERDTGRPRGFGFLTFADRRGMDDAIREMHGHELGERTITVNKAEPKMEGDNSESGFRRGG
        MA KDEYRIFVGGLS +VSER+LE+AFSRYGKI+ETQIMLERDTGRPRGFGF+TFADRRGMDDAIREMHGHE GER I+VNKAEPKMEGD+ E GFR GG
Subjt:  MAGKDEYRIFVGGLSSSVSERQLESAFSRYGKILETQIMLERDTGRPRGFGFLTFADRRGMDDAIREMHGHELGERTITVNKAEPKMEGDNSESGFRRGG

Query:  YSSGGRASFGRGGDRSVGQDECFKCGRPGHWARDCPSAGGGVRGRVGDSFSLRSRFDSDGRGDRFGEDRDRYIDDRYDLGRDGGRYGDRDRFDRRDDKYG
        YSSGGRASFGRGGDRSVGQDECFKCGRPGHWARDCPSAGGG RGR   SFS RSRFD D RGDRFG DRDRY+DDRYD GRDGGRYGDRDRFDRRDDKYG
Subjt:  YSSGGRASFGRGGDRSVGQDECFKCGRPGHWARDCPSAGGGVRGRVGDSFSLRSRFDSDGRGDRFGEDRDRYIDDRYDLGRDGGRYGDRDRFDRRDDKYG

Query:  SRDRYFDDRYPSAGDRFAGGGDRYDVSDRNPQNGYAKDRGSYGRDIGPRSGSDRYGS-GGPARYEGRSLRDRPGPYDRPSRGGRPSSYERY
        SRDRYFDDRYPSAGDRFA GGDRYDVSDR PQNGY KDRG Y RDIGPRSGSDRYG+ GGP RYEGR+ RDRPGPYDRPSRGGRPSSYERY
Subjt:  SRDRYFDDRYPSAGDRFAGGGDRYDVSDRNPQNGYAKDRGSYGRDIGPRSGSDRYGS-GGPARYEGRSLRDRPGPYDRPSRGGRPSSYERY

SwissProt top hitse value%identityAlignment
O22703 Glycine-rich RNA-binding protein RZ1B1.4e-7155.81Show/hide
Query:  GKDEYRIFVGGLSSSVSERQLESAFSRYGKILETQIMLERDTGRPRGFGFLTFADRRGMDDAIREMHGHELGERTITVNKAEPKMEGDNSESGFRRGGYS
        G  E RIFVGGLS  V+ERQLES F RYGKI E QIM+ RDTGRPRGFGF+TF DRRG DDAI+ MHG ELG + I+VNKAEPK+ G++ +   + GGYS
Subjt:  GKDEYRIFVGGLSSSVSERQLESAFSRYGKILETQIMLERDTGRPRGFGFLTFADRRGMDDAIREMHGHELGERTITVNKAEPKMEGDNSESGFRRGGYS

Query:  SGGRASFGRGGDRSVGQDECFKCGRPGHWARDCPSAGGGVRGRVGDSFSLRSRF-DSDGRGDRFGE-----------DRDRYIDDRYDLGRDGGRYGDRD
        S G+ +          +DECFKC RPGHWARDCPS G   R R     ++RSR  D DG  DR+G+           + DRY+D R D  RDGGRY  RD
Subjt:  SGGRASFGRGGDRSVGQDECFKCGRPGHWARDCPSAGGGVRGRVGDSFSLRSRF-DSDGRGDRFGE-----------DRDRYIDDRYDLGRDGGRYGDRD

Query:  RFDRRDDKYGSRDRYFDDRYPSAGDRFAGGGDRYDVSDRNPQNGYAKDRGSYGRDIGPRSGSDRYGSGGPARYEGRSLRDRPGPYDRPSR-GGRPSSYER
        RFD   DKY  RD Y  +RY   GDRF    DRY + + + +N Y     SY RD   R  SDRYG  GP R EGR  R RPGPYDRPSR GGRPSSYER
Subjt:  RFDRRDDKYGSRDRYFDDRYPSAGDRFAGGGDRYDVSDRNPQNGYAKDRGSYGRDIGPRSGSDRYGSGGPARYEGRSLRDRPGPYDRPSR-GGRPSSYER

Query:  Y
        +
Subjt:  Y

P49310 Glycine-rich RNA-binding protein GRP1A1.6e-2243.24Show/hide
Query:  MAGKD-EYRIFVGGLSSSVSERQLESAFSRYGKILETQIMLERDTGRPRGFGFLTFADRRGMDDAIREMHGHELGERTITVNKAEPKMEGDNSESGFRRG
        MA  D EYR FVGGL+ +  +R LE+AFS+YG++L+++I+ +R+TGR RGFGF+TF D + M DAI  M+G +L  R+ITVN+A+ +  G         G
Subjt:  MAGKD-EYRIFVGGLSSSVSERQLESAFSRYGKILETQIMLERDTGRPRGFGFLTFADRRGMDDAIREMHGHELGERTITVNKAEPKMEGDNSESGFRRG

Query:  GYSSGGRASFGRGGD--RSVGQDECFKCGRPGHWARDCPSAGGGVRGR
        GY SGG   +G GG      G++  +  G  G+ +R     G G  GR
Subjt:  GYSSGGRASFGRGGD--RSVGQDECFKCGRPGHWARDCPSAGGGVRGR

Q03250 Glycine-rich RNA-binding protein 71.5e-2041.72Show/hide
Query:  AGKDEYRIFVGGLSSSVSERQLESAFSRYGKILETQIMLERDTGRPRGFGFLTFADRRGMDDAIREMHGHELGERTITVNKAEPKMEG------DNSESG
        +G  EYR FVGGL+ +  +R LE+AF++YG +++++I+ +R+TGR RGFGF+TF D + M DAI  M+G +L  R+ITVN+A+ +  G           G
Subjt:  AGKDEYRIFVGGLSSSVSERQLESAFSRYGKILETQIMLERDTGRPRGFGFLTFADRRGMDDAIREMHGHELGERTITVNKAEPKMEG------DNSESG

Query:  FRRGGYS--SGGRASFGRGGDRSVGQDECFKCGRPGHWARDCPSAGGGVRG
        +R GG    SGG  S+G GG R  G    +  G  G+ +R     GGG  G
Subjt:  FRRGGYS--SGGRASFGRGGDRSVGQDECFKCGRPGHWARDCPSAGGGVRG

Q8RWN5 Glycine-rich RNA-binding protein RZ1C1.6e-7558.63Show/hide
Query:  MAGKDEYRIFVGGLSSSVSERQLESAFSRYGKILETQIMLERDTGRPRGFGFLTFADRRGMDDAIREMHGHELGERTITVNKAEPKMEGDNSES----GF
        MA K+  RIFVGGLS  V++R LE AFSR+G IL+ QIMLERDTGR RGFGF+TFADRR MD++IREMHG + G+R I+VN+AEPK+  D+ ES    G 
Subjt:  MAGKDEYRIFVGGLSSSVSERQLESAFSRYGKILETQIMLERDTGRPRGFGFLTFADRRGMDDAIREMHGHELGERTITVNKAEPKMEGDNSES----GF

Query:  RRGGYSSGGRASFGRGGDRS--VGQDECFKCGRPGHWARDCPSAGGGVRGRVGDSFSLRSRF-DSDGRGDRFGE-----DRDRYIDDRYDLGRDGGRYGD
        R  GYS  G+ SFG GG     VG+DECFKCGR GHWARDCPSAGGG  G VG   S  S +  SDGR DR+ +     DR+RYIDDRYD      RYG 
Subjt:  RRGGYSSGGRASFGRGGDRS--VGQDECFKCGRPGHWARDCPSAGGGVRGRVGDSFSLRSRF-DSDGRGDRFGE-----DRDRYIDDRYDLGRDGGRYGD

Query:  RDRFDRRDDKYGSRDRYFDDRYPSAGDRFAGGGDRYD-VSDRNPQNGYAKDRGSYGRDIGPRSGSDRYG---SGGPAR---YEGRSLRDRPG-PYDRPSR
        RDRFD R + Y  RDRY  DRY +  DRFA GGDRY   SDR P   Y K R S+ RDI P +GSDRYG   +GGP R    EGR  R R G PY+RPSR
Subjt:  RDRFDRRDDKYGSRDRYFDDRYPSAGDRFAGGGDRYD-VSDRNPQNGYAKDRGSYGRDIGPRSGSDRYG---SGGPAR---YEGRSLRDRPG-PYDRPSR

Query:  GGRPSSY
         G   +Y
Subjt:  GGRPSSY

Q9LIN3 Glycine-rich RNA-binding protein RZ1A2.0e-3339.04Show/hide
Query:  MAGKDEYRIFVGGLSSSVSERQLESAFSRYGKILETQIMLERDTGRPRGFGFLTFADRRGMDDAIREMHGHELGERTITVNKAEPKMEG----DNSESGF
        M+   EYR F+GGL+ + S+R L  AF +YG ++E +++L++ +GR RGFGF+TF +++ MD+AI  M+G +L  RTITV+KA+P   G    ++ + G 
Subjt:  MAGKDEYRIFVGGLSSSVSERQLESAFSRYGKILETQIMLERDTGRPRGFGFLTFADRRGMDDAIREMHGHELGERTITVNKAEPKMEG----DNSESGF

Query:  RRGGYSSGGRASFGRGGDRSVGQDECFKCGRPGHWARDCPSAGGGVRGRVGDSFSLRSRFDSDGRGDRFGEDRDRYI--DDRYDLGRDGGRYGDR-DRFD
         RG      R S GRGG       +CFKCG+PGH+AR+CPS                     DG G RF    DRY   DDRY  G    RYG + DR+ 
Subjt:  RRGGYSSGGRASFGRGGDRSVGQDECFKCGRPGHWARDCPSAGGGVRGRVGDSFSLRSRFDSDGRGDRFGEDRDRYI--DDRYDLGRDGGRYGDR-DRFD

Query:  RRDDKYGSRDRYFDDRYPSAGDRFA---GGGDRYDVSDRNPQNGYAKDRGSYGRDIGPRSGSDRYGSGGPARYEGRSLRDRPGPYDRPSRGG
         +DD+Y S+    DDRY S  DR+    GGG RY       + G        GR    R G  R   GG         R    PYDRP  GG
Subjt:  RRDDKYGSRDRYFDDRYPSAGDRFA---GGGDRYDVSDRNPQNGYAKDRGSYGRDIGPRSGSDRYGSGGPARYEGRSLRDRPGPYDRPSRGG

Arabidopsis top hitse value%identityAlignment
AT1G60650.1 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain9.9e-7355.81Show/hide
Query:  GKDEYRIFVGGLSSSVSERQLESAFSRYGKILETQIMLERDTGRPRGFGFLTFADRRGMDDAIREMHGHELGERTITVNKAEPKMEGDNSESGFRRGGYS
        G  E RIFVGGLS  V+ERQLES F RYGKI E QIM+ RDTGRPRGFGF+TF DRRG DDAI+ MHG ELG + I+VNKAEPK+ G++ +   + GGYS
Subjt:  GKDEYRIFVGGLSSSVSERQLESAFSRYGKILETQIMLERDTGRPRGFGFLTFADRRGMDDAIREMHGHELGERTITVNKAEPKMEGDNSESGFRRGGYS

Query:  SGGRASFGRGGDRSVGQDECFKCGRPGHWARDCPSAGGGVRGRVGDSFSLRSRF-DSDGRGDRFGE-----------DRDRYIDDRYDLGRDGGRYGDRD
        S G+ +          +DECFKC RPGHWARDCPS G   R R     ++RSR  D DG  DR+G+           + DRY+D R D  RDGGRY  RD
Subjt:  SGGRASFGRGGDRSVGQDECFKCGRPGHWARDCPSAGGGVRGRVGDSFSLRSRF-DSDGRGDRFGE-----------DRDRYIDDRYDLGRDGGRYGDRD

Query:  RFDRRDDKYGSRDRYFDDRYPSAGDRFAGGGDRYDVSDRNPQNGYAKDRGSYGRDIGPRSGSDRYGSGGPARYEGRSLRDRPGPYDRPSR-GGRPSSYER
        RFD   DKY  RD Y  +RY   GDRF    DRY + + + +N Y     SY RD   R  SDRYG  GP R EGR  R RPGPYDRPSR GGRPSSYER
Subjt:  RFDRRDDKYGSRDRYFDDRYPSAGDRFAGGGDRYDVSDRNPQNGYAKDRGSYGRDIGPRSGSDRYGSGGPARYEGRSLRDRPGPYDRPSR-GGRPSSYER

Query:  Y
        +
Subjt:  Y

AT1G60650.2 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain9.9e-7355.81Show/hide
Query:  GKDEYRIFVGGLSSSVSERQLESAFSRYGKILETQIMLERDTGRPRGFGFLTFADRRGMDDAIREMHGHELGERTITVNKAEPKMEGDNSESGFRRGGYS
        G  E RIFVGGLS  V+ERQLES F RYGKI E QIM+ RDTGRPRGFGF+TF DRRG DDAI+ MHG ELG + I+VNKAEPK+ G++ +   + GGYS
Subjt:  GKDEYRIFVGGLSSSVSERQLESAFSRYGKILETQIMLERDTGRPRGFGFLTFADRRGMDDAIREMHGHELGERTITVNKAEPKMEGDNSESGFRRGGYS

Query:  SGGRASFGRGGDRSVGQDECFKCGRPGHWARDCPSAGGGVRGRVGDSFSLRSRF-DSDGRGDRFGE-----------DRDRYIDDRYDLGRDGGRYGDRD
        S G+ +          +DECFKC RPGHWARDCPS G   R R     ++RSR  D DG  DR+G+           + DRY+D R D  RDGGRY  RD
Subjt:  SGGRASFGRGGDRSVGQDECFKCGRPGHWARDCPSAGGGVRGRVGDSFSLRSRF-DSDGRGDRFGE-----------DRDRYIDDRYDLGRDGGRYGDRD

Query:  RFDRRDDKYGSRDRYFDDRYPSAGDRFAGGGDRYDVSDRNPQNGYAKDRGSYGRDIGPRSGSDRYGSGGPARYEGRSLRDRPGPYDRPSR-GGRPSSYER
        RFD   DKY  RD Y  +RY   GDRF    DRY + + + +N Y     SY RD   R  SDRYG  GP R EGR  R RPGPYDRPSR GGRPSSYER
Subjt:  RFDRRDDKYGSRDRYFDDRYPSAGDRFAGGGDRYDVSDRNPQNGYAKDRGSYGRDIGPRSGSDRYGSGGPARYEGRSLRDRPGPYDRPSR-GGRPSSYER

Query:  Y
        +
Subjt:  Y

AT2G21660.2 cold, circadian rhythm, and rna binding 23.6e-2240.67Show/hide
Query:  AGKDEYRIFVGGLSSSVSERQLESAFSRYGKILETQIMLERDTGRPRGFGFLTFADRRGMDDAIREMHGHELGERTITVNKAEPKMEGDNSESGFRRGG-
        +G  EYR FVGGL+ +  +R LE+AF++YG +++++I+ +R+TGR RGFGF+TF D + M DAI  M+G +L  R+ITVN+A+ +  G     G R GG 
Subjt:  AGKDEYRIFVGGLSSSVSERQLESAFSRYGKILETQIMLERDTGRPRGFGFLTFADRRGMDDAIREMHGHELGERTITVNKAEPKMEGDNSESGFRRGG-

Query:  YSSGGRASFGRGGDRSVGQDECFKCGRPGHWARDCPSAGGGVRGRVGDSF
        Y  GG    G GG    G     + G  G +       GGG  G  G  +
Subjt:  YSSGGRASFGRGGDRSVGQDECFKCGRPGHWARDCPSAGGGVRGRVGDSF

AT3G26420.1 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain1.4e-3439.04Show/hide
Query:  MAGKDEYRIFVGGLSSSVSERQLESAFSRYGKILETQIMLERDTGRPRGFGFLTFADRRGMDDAIREMHGHELGERTITVNKAEPKMEG----DNSESGF
        M+   EYR F+GGL+ + S+R L  AF +YG ++E +++L++ +GR RGFGF+TF +++ MD+AI  M+G +L  RTITV+KA+P   G    ++ + G 
Subjt:  MAGKDEYRIFVGGLSSSVSERQLESAFSRYGKILETQIMLERDTGRPRGFGFLTFADRRGMDDAIREMHGHELGERTITVNKAEPKMEG----DNSESGF

Query:  RRGGYSSGGRASFGRGGDRSVGQDECFKCGRPGHWARDCPSAGGGVRGRVGDSFSLRSRFDSDGRGDRFGEDRDRYI--DDRYDLGRDGGRYGDR-DRFD
         RG      R S GRGG       +CFKCG+PGH+AR+CPS                     DG G RF    DRY   DDRY  G    RYG + DR+ 
Subjt:  RRGGYSSGGRASFGRGGDRSVGQDECFKCGRPGHWARDCPSAGGGVRGRVGDSFSLRSRFDSDGRGDRFGEDRDRYI--DDRYDLGRDGGRYGDR-DRFD

Query:  RRDDKYGSRDRYFDDRYPSAGDRFA---GGGDRYDVSDRNPQNGYAKDRGSYGRDIGPRSGSDRYGSGGPARYEGRSLRDRPGPYDRPSRGG
         +DD+Y S+    DDRY S  DR+    GGG RY       + G        GR    R G  R   GG         R    PYDRP  GG
Subjt:  RRDDKYGSRDRYFDDRYPSAGDRFA---GGGDRYDVSDRNPQNGYAKDRGSYGRDIGPRSGSDRYGSGGPARYEGRSLRDRPGPYDRPSRGG

AT5G04280.1 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain1.1e-7658.63Show/hide
Query:  MAGKDEYRIFVGGLSSSVSERQLESAFSRYGKILETQIMLERDTGRPRGFGFLTFADRRGMDDAIREMHGHELGERTITVNKAEPKMEGDNSES----GF
        MA K+  RIFVGGLS  V++R LE AFSR+G IL+ QIMLERDTGR RGFGF+TFADRR MD++IREMHG + G+R I+VN+AEPK+  D+ ES    G 
Subjt:  MAGKDEYRIFVGGLSSSVSERQLESAFSRYGKILETQIMLERDTGRPRGFGFLTFADRRGMDDAIREMHGHELGERTITVNKAEPKMEGDNSES----GF

Query:  RRGGYSSGGRASFGRGGDRS--VGQDECFKCGRPGHWARDCPSAGGGVRGRVGDSFSLRSRF-DSDGRGDRFGE-----DRDRYIDDRYDLGRDGGRYGD
        R  GYS  G+ SFG GG     VG+DECFKCGR GHWARDCPSAGGG  G VG   S  S +  SDGR DR+ +     DR+RYIDDRYD      RYG 
Subjt:  RRGGYSSGGRASFGRGGDRS--VGQDECFKCGRPGHWARDCPSAGGGVRGRVGDSFSLRSRF-DSDGRGDRFGE-----DRDRYIDDRYDLGRDGGRYGD

Query:  RDRFDRRDDKYGSRDRYFDDRYPSAGDRFAGGGDRYD-VSDRNPQNGYAKDRGSYGRDIGPRSGSDRYG---SGGPAR---YEGRSLRDRPG-PYDRPSR
        RDRFD R + Y  RDRY  DRY +  DRFA GGDRY   SDR P   Y K R S+ RDI P +GSDRYG   +GGP R    EGR  R R G PY+RPSR
Subjt:  RDRFDRRDDKYGSRDRYFDDRYPSAGDRFAGGGDRYD-VSDRNPQNGYAKDRGSYGRDIGPRSGSDRYG---SGGPAR---YEGRSLRDRPG-PYDRPSR

Query:  GGRPSSY
         G   +Y
Subjt:  GGRPSSY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGGGAAGGACGAGTATCGAATATTTGTTGGAGGGCTCTCATCGAGCGTCTCCGAGCGTCAGCTCGAGAGCGCTTTCAGCCGCTATGGCAAAATTCTTGAAACTCA
GATCATGTTAGAACGAGATACAGGTCGTCCTCGAGGGTTTGGTTTCCTTACCTTCGCAGACCGTCGAGGGATGGATGATGCAATTAGAGAGATGCATGGGCATGAGCTTG
GTGAGCGGACTATCACAGTTAATAAGGCTGAACCCAAGATGGAGGGAGATAATTCAGAGTCAGGCTTCAGGAGGGGAGGCTATTCATCTGGTGGTAGGGCTAGTTTTGGT
AGAGGAGGAGATAGATCTGTTGGACAAGATGAATGCTTCAAGTGTGGTCGCCCGGGGCATTGGGCACGAGACTGCCCTTCAGCTGGTGGTGGTGTACGTGGTAGGGTTGG
AGATTCATTTTCATTGCGATCTCGATTTGATAGTGATGGCCGTGGGGATCGTTTTGGAGAAGACCGTGACCGATATATAGATGATCGTTATGATTTAGGGCGAGATGGGG
GGCGATATGGTGATAGAGATCGTTTCGATCGTAGAGATGACAAGTATGGAAGTCGAGACCGCTATTTTGATGACAGGTACCCATCTGCTGGAGATCGTTTTGCAGGTGGT
GGTGATAGGTACGATGTTAGTGATCGCAATCCTCAAAATGGCTATGCAAAAGACAGAGGCAGCTATGGTAGAGATATCGGTCCTAGGAGTGGCAGCGATAGGTATGGTAG
CGGTGGTCCTGCCCGTTACGAGGGAAGGAGTCTCAGAGATAGGCCAGGCCCTTACGACCGCCCGAGCAGGGGAGGACGACCGTCATCCTATGAGCGCTATTGA
mRNA sequenceShow/hide mRNA sequence
TTGCAGTCTAAAAGGTGAAAACCCTTCACCCTGTGGAACTCATCGGTTCATTTCAGGCTACGAAGGAATTGTATCTGATCCATAGGCGAAATTGTAATGGCTGGGAAGGA
CGAGTATCGAATATTTGTTGGAGGGCTCTCATCGAGCGTCTCCGAGCGTCAGCTCGAGAGCGCTTTCAGCCGCTATGGCAAAATTCTTGAAACTCAGATCATGTTAGAAC
GAGATACAGGTCGTCCTCGAGGGTTTGGTTTCCTTACCTTCGCAGACCGTCGAGGGATGGATGATGCAATTAGAGAGATGCATGGGCATGAGCTTGGTGAGCGGACTATC
ACAGTTAATAAGGCTGAACCCAAGATGGAGGGAGATAATTCAGAGTCAGGCTTCAGGAGGGGAGGCTATTCATCTGGTGGTAGGGCTAGTTTTGGTAGAGGAGGAGATAG
ATCTGTTGGACAAGATGAATGCTTCAAGTGTGGTCGCCCGGGGCATTGGGCACGAGACTGCCCTTCAGCTGGTGGTGGTGTACGTGGTAGGGTTGGAGATTCATTTTCAT
TGCGATCTCGATTTGATAGTGATGGCCGTGGGGATCGTTTTGGAGAAGACCGTGACCGATATATAGATGATCGTTATGATTTAGGGCGAGATGGGGGGCGATATGGTGAT
AGAGATCGTTTCGATCGTAGAGATGACAAGTATGGAAGTCGAGACCGCTATTTTGATGACAGGTACCCATCTGCTGGAGATCGTTTTGCAGGTGGTGGTGATAGGTACGA
TGTTAGTGATCGCAATCCTCAAAATGGCTATGCAAAAGACAGAGGCAGCTATGGTAGAGATATCGGTCCTAGGAGTGGCAGCGATAGGTATGGTAGCGGTGGTCCTGCCC
GTTACGAGGGAAGGAGTCTCAGAGATAGGCCAGGCCCTTACGACCGCCCGAGCAGGGGAGGACGACCGTCATCCTATGAGCGCTATTGAAATTCAGATGTATGTTTTTTT
GTTCGGAAATCGTTCTTTAAACTTGGGAAGACACTTGCAATTGAGCTTTTGATGCTACATCTGACCTTTTTTGGGATTTGATGTCTATCCAAAACTTCACTACTTTAAGA
AATATTTTGTATTAGAAACTTGGTTTTTCACAAATTTCTAATATTCATAGGGTCCTTTACTTTCTTTGTTGGACAACGTAAGTTTGAGAACTTCCTTTTTCTCGAGTGTT
CGAATTCCTAAATTAAATTCCATTATTCTATAGTTTCACAAATGTA
Protein sequenceShow/hide protein sequence
MAGKDEYRIFVGGLSSSVSERQLESAFSRYGKILETQIMLERDTGRPRGFGFLTFADRRGMDDAIREMHGHELGERTITVNKAEPKMEGDNSESGFRRGGYSSGGRASFG
RGGDRSVGQDECFKCGRPGHWARDCPSAGGGVRGRVGDSFSLRSRFDSDGRGDRFGEDRDRYIDDRYDLGRDGGRYGDRDRFDRRDDKYGSRDRYFDDRYPSAGDRFAGG
GDRYDVSDRNPQNGYAKDRGSYGRDIGPRSGSDRYGSGGPARYEGRSLRDRPGPYDRPSRGGRPSSYERY