; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0027419 (gene) of Chayote v1 genome

Gene IDSed0027419
OrganismSechium edule (Chayote v1)
Descriptiondystrophia myotonica WD repeat-containing protein-like
Genome locationLG13:17414385..17414735
RNA-Seq ExpressionSed0027419
SyntenySed0027419
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR015943 - WD40/YVTN repeat-like-containing domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008463817.1 PREDICTED: dystrophia myotonica WD repeat-containing protein-like [Cucumis melo]8.0e-5289.66Show/hide
Query:  MDEIVVPLRWCPPSGSPTFSTGSQSAHWDSIMPLGTLQPAPCMRDVPKLSPVVAHRVHTESLSGLIFTQESILTACREGHVKIWMRPSSETQSSNSESLV
        MDEIVVPLR CPP GSPTFSTGSQSAHWDSI PLGTLQPAPCMRDVPKLSPVVAHRVHTE LSGL+FTQESILTACREGHVKIWMRPSSETQSSNSE+LV
Subjt:  MDEIVVPLRWCPPSGSPTFSTGSQSAHWDSIMPLGTLQPAPCMRDVPKLSPVVAHRVHTESLSGLIFTQESILTACREGHVKIWMRPSSETQSSNSESLV

Query:  GSTMSAGTKIGSSTLK
        GS+  AG+++GSSTLK
Subjt:  GSTMSAGTKIGSSTLK

XP_022156951.1 dystrophia myotonica WD repeat-containing protein-like [Momordica charantia]1.8e-5190.52Show/hide
Query:  MDEIVVPLRWCPPSGSPTFSTGSQSAHWDSIMPLGTLQPAPCMRDVPKLSPVVAHRVHTESLSGLIFTQESILTACREGHVKIWMRPSSETQSSNSESLV
        MDEIVVPLR CPP GSPTFSTGSQSAHWDSI PLGTLQPAPCMRDVPKLSPVVA RVHTE LSGLIFTQESILTACREGHVKIWMRPSSETQSSNSE+LV
Subjt:  MDEIVVPLRWCPPSGSPTFSTGSQSAHWDSIMPLGTLQPAPCMRDVPKLSPVVAHRVHTESLSGLIFTQESILTACREGHVKIWMRPSSETQSSNSESLV

Query:  GSTMSAGTKIGSSTLK
        GS+  AG+K+GSSTLK
Subjt:  GSTMSAGTKIGSSTLK

XP_022997935.1 WD repeat-containing protein 20-like [Cucurbita maxima]4.0e-5189.66Show/hide
Query:  MDEIVVPLRWCPPSGSPTFSTGSQSAHWDSIMPLGTLQPAPCMRDVPKLSPVVAHRVHTESLSGLIFTQESILTACREGHVKIWMRPSSETQSSNSESLV
        MDEIVVPLR CPP GSPTFS GSQSAHWDSI PLGTLQPAPCMRDVPKLSPVVAHRVHTE LSG+IFTQESILTACREGHVKIWMRPSSETQSSNSE LV
Subjt:  MDEIVVPLRWCPPSGSPTFSTGSQSAHWDSIMPLGTLQPAPCMRDVPKLSPVVAHRVHTESLSGLIFTQESILTACREGHVKIWMRPSSETQSSNSESLV

Query:  GSTMSAGTKIGSSTLK
         S+M AG K+GSSTLK
Subjt:  GSTMSAGTKIGSSTLK

XP_023523294.1 WD repeat-containing protein 20-like [Cucurbita pepo subsp. pepo]4.0e-5189.66Show/hide
Query:  MDEIVVPLRWCPPSGSPTFSTGSQSAHWDSIMPLGTLQPAPCMRDVPKLSPVVAHRVHTESLSGLIFTQESILTACREGHVKIWMRPSSETQSSNSESLV
        MDEIVVPLR CPP GSPTFS GSQSAHWDSI PLGTLQPAPCMRDVPKLSPVVAHRVHTE LSG+IFTQESILTACREGHVKIWMRPSSETQSSNSE LV
Subjt:  MDEIVVPLRWCPPSGSPTFSTGSQSAHWDSIMPLGTLQPAPCMRDVPKLSPVVAHRVHTESLSGLIFTQESILTACREGHVKIWMRPSSETQSSNSESLV

Query:  GSTMSAGTKIGSSTLK
         S+M AG K+GSSTLK
Subjt:  GSTMSAGTKIGSSTLK

XP_038894735.1 dystrophia myotonica WD repeat-containing protein-like [Benincasa hispida]2.8e-5290.52Show/hide
Query:  MDEIVVPLRWCPPSGSPTFSTGSQSAHWDSIMPLGTLQPAPCMRDVPKLSPVVAHRVHTESLSGLIFTQESILTACREGHVKIWMRPSSETQSSNSESLV
        MDEIVVPLR CPP GSPTFSTGSQSAHWDSI PLGTLQPAPCMRDVPKLSPVVAHRVHTE LSGL+FTQESILTACREGHVKIWMRPSSETQSSNSE+LV
Subjt:  MDEIVVPLRWCPPSGSPTFSTGSQSAHWDSIMPLGTLQPAPCMRDVPKLSPVVAHRVHTESLSGLIFTQESILTACREGHVKIWMRPSSETQSSNSESLV

Query:  GSTMSAGTKIGSSTLK
        GS+  AGT++GSSTLK
Subjt:  GSTMSAGTKIGSSTLK

TrEMBL top hitse value%identityAlignment
A0A1S3CK58 dystrophia myotonica WD repeat-containing protein-like3.9e-5289.66Show/hide
Query:  MDEIVVPLRWCPPSGSPTFSTGSQSAHWDSIMPLGTLQPAPCMRDVPKLSPVVAHRVHTESLSGLIFTQESILTACREGHVKIWMRPSSETQSSNSESLV
        MDEIVVPLR CPP GSPTFSTGSQSAHWDSI PLGTLQPAPCMRDVPKLSPVVAHRVHTE LSGL+FTQESILTACREGHVKIWMRPSSETQSSNSE+LV
Subjt:  MDEIVVPLRWCPPSGSPTFSTGSQSAHWDSIMPLGTLQPAPCMRDVPKLSPVVAHRVHTESLSGLIFTQESILTACREGHVKIWMRPSSETQSSNSESLV

Query:  GSTMSAGTKIGSSTLK
        GS+  AG+++GSSTLK
Subjt:  GSTMSAGTKIGSSTLK

A0A5A7UNI0 Dystrophia myotonica WD repeat-containing protein-like3.9e-5289.66Show/hide
Query:  MDEIVVPLRWCPPSGSPTFSTGSQSAHWDSIMPLGTLQPAPCMRDVPKLSPVVAHRVHTESLSGLIFTQESILTACREGHVKIWMRPSSETQSSNSESLV
        MDEIVVPLR CPP GSPTFSTGSQSAHWDSI PLGTLQPAPCMRDVPKLSPVVAHRVHTE LSGL+FTQESILTACREGHVKIWMRPSSETQSSNSE+LV
Subjt:  MDEIVVPLRWCPPSGSPTFSTGSQSAHWDSIMPLGTLQPAPCMRDVPKLSPVVAHRVHTESLSGLIFTQESILTACREGHVKIWMRPSSETQSSNSESLV

Query:  GSTMSAGTKIGSSTLK
        GS+  AG+++GSSTLK
Subjt:  GSTMSAGTKIGSSTLK

A0A6J1DWI2 dystrophia myotonica WD repeat-containing protein-like8.7e-5290.52Show/hide
Query:  MDEIVVPLRWCPPSGSPTFSTGSQSAHWDSIMPLGTLQPAPCMRDVPKLSPVVAHRVHTESLSGLIFTQESILTACREGHVKIWMRPSSETQSSNSESLV
        MDEIVVPLR CPP GSPTFSTGSQSAHWDSI PLGTLQPAPCMRDVPKLSPVVA RVHTE LSGLIFTQESILTACREGHVKIWMRPSSETQSSNSE+LV
Subjt:  MDEIVVPLRWCPPSGSPTFSTGSQSAHWDSIMPLGTLQPAPCMRDVPKLSPVVAHRVHTESLSGLIFTQESILTACREGHVKIWMRPSSETQSSNSESLV

Query:  GSTMSAGTKIGSSTLK
        GS+  AG+K+GSSTLK
Subjt:  GSTMSAGTKIGSSTLK

A0A6J1GA15 WD repeat-containing protein 20-like2.5e-5189.66Show/hide
Query:  MDEIVVPLRWCPPSGSPTFSTGSQSAHWDSIMPLGTLQPAPCMRDVPKLSPVVAHRVHTESLSGLIFTQESILTACREGHVKIWMRPSSETQSSNSESLV
        MDEIVVPLR CPP GSPTFS GSQSAHWDSI PLGTLQPAPCMRDVPKLSPVVAHRVHTE LSG+IFTQESILTACREGHVKIWMRPSSETQSSNSE+LV
Subjt:  MDEIVVPLRWCPPSGSPTFSTGSQSAHWDSIMPLGTLQPAPCMRDVPKLSPVVAHRVHTESLSGLIFTQESILTACREGHVKIWMRPSSETQSSNSESLV

Query:  GSTMSAGTKIGSSTLK
         S+M AG K+GSSTLK
Subjt:  GSTMSAGTKIGSSTLK

A0A6J1KBA4 WD repeat-containing protein 20-like1.9e-5189.66Show/hide
Query:  MDEIVVPLRWCPPSGSPTFSTGSQSAHWDSIMPLGTLQPAPCMRDVPKLSPVVAHRVHTESLSGLIFTQESILTACREGHVKIWMRPSSETQSSNSESLV
        MDEIVVPLR CPP GSPTFS GSQSAHWDSI PLGTLQPAPCMRDVPKLSPVVAHRVHTE LSG+IFTQESILTACREGHVKIWMRPSSETQSSNSE LV
Subjt:  MDEIVVPLRWCPPSGSPTFSTGSQSAHWDSIMPLGTLQPAPCMRDVPKLSPVVAHRVHTESLSGLIFTQESILTACREGHVKIWMRPSSETQSSNSESLV

Query:  GSTMSAGTKIGSSTLK
         S+M AG K+GSSTLK
Subjt:  GSTMSAGTKIGSSTLK

SwissProt top hitse value%identityAlignment
D9N129 WD repeat-containing protein 20 homolog2.9e-0438.3Show/hide
Query:  PCMRDVPKLSPVVAHRVHTESLSGLIFTQESILTACREGHVKIWMRP
        P +RDVP + P++  +V  + L+ L F ++ ++TAC+EG++  W RP
Subjt:  PCMRDVPKLSPVVAHRVHTESLSGLIFTQESILTACREGHVKIWMRP

Q08274 Dystrophia myotonica WD repeat-containing protein4.5e-0530.68Show/hide
Query:  SGSPTFSTGSQSAHWDSIMPLGTLQPAPCMRDVPKLSPVVAHRVHTESLSGLIFTQESILTACREGHVKIWMRPSSETQSSNSESLVG
        S +   S  +  +  D    LGT    P + +VP L P+V  ++  E L+ L+F ++ I+TAC+EG +  W RP        +E+  G
Subjt:  SGSPTFSTGSQSAHWDSIMPLGTLQPAPCMRDVPKLSPVVAHRVHTESLSGLIFTQESILTACREGHVKIWMRPSSETQSSNSESLVG

Q09019 Dystrophia myotonica WD repeat-containing protein7.6e-0534.25Show/hide
Query:  DSIMPLGTLQPAPCMRDVPKLSPVVAHRVHTESLSGLIFTQESILTACREGHVKIWMRPSSETQSSNSESLVG
        D    LGT    P + +VP L P+V  ++  E L+ L+F ++ I+TAC+EG +  W RP        +E+  G
Subjt:  DSIMPLGTLQPAPCMRDVPKLSPVVAHRVHTESLSGLIFTQESILTACREGHVKIWMRPSSETQSSNSESLVG

Q8TBZ3 WD repeat-containing protein 202.6e-0542.37Show/hide
Query:  DSIMPLGTLQPAPCMRDVPKLSPVVAHRVHTESLSGLIFTQESILTACREGHVKIWMRP
        D    LGT    P M DVP L P++  ++  E L+ LIF ++ I+TAC+EG +  W RP
Subjt:  DSIMPLGTLQPAPCMRDVPKLSPVVAHRVHTESLSGLIFTQESILTACREGHVKIWMRP

Q9D5R2 WD repeat-containing protein 201.2e-0540.32Show/hide
Query:  AHWDSIMPLGTLQPAPCMRDVPKLSPVVAHRVHTESLSGLIFTQESILTACREGHVKIWMRP
        A  D    LGT    P M DVP L P++  ++  E L+ L+F ++ I+TAC+EG +  W RP
Subjt:  AHWDSIMPLGTLQPAPCMRDVPKLSPVVAHRVHTESLSGLIFTQESILTACREGHVKIWMRP

Arabidopsis top hitse value%identityAlignment
AT2G37160.1 Transducin/WD40 repeat-like superfamily protein4.0e-4171.3Show/hide
Query:  MDEIVVPLRWCPPSGSPTFSTGSQSAHWDSIMPLGTLQPAPCMRDVPKLSPVVAHRVHTESLSGLIFTQESILTACREGHVKIWMRPSSE-TQSSNSESL
        MDEIVVPLR  PP GSPT+STGSQSAHWD+I+P+GTLQPAPCMRDVPKLSPVVAHRVHTE LSGLIFTQES++TACREGH+KIW RP ++ + SS + + 
Subjt:  MDEIVVPLRWCPPSGSPTFSTGSQSAHWDSIMPLGTLQPAPCMRDVPKLSPVVAHRVHTESLSGLIFTQESILTACREGHVKIWMRPSSE-TQSSNSESL

Query:  VGSTMSAGTKIGSST
          S  S  +K+G S+
Subjt:  VGSTMSAGTKIGSST

AT2G37160.2 Transducin/WD40 repeat-like superfamily protein4.0e-4171.3Show/hide
Query:  MDEIVVPLRWCPPSGSPTFSTGSQSAHWDSIMPLGTLQPAPCMRDVPKLSPVVAHRVHTESLSGLIFTQESILTACREGHVKIWMRPSSE-TQSSNSESL
        MDEIVVPLR  PP GSPT+STGSQSAHWD+I+P+GTLQPAPCMRDVPKLSPVVAHRVHTE LSGLIFTQES++TACREGH+KIW RP ++ + SS + + 
Subjt:  MDEIVVPLRWCPPSGSPTFSTGSQSAHWDSIMPLGTLQPAPCMRDVPKLSPVVAHRVHTESLSGLIFTQESILTACREGHVKIWMRPSSE-TQSSNSESL

Query:  VGSTMSAGTKIGSST
          S  S  +K+G S+
Subjt:  VGSTMSAGTKIGSST

AT3G53390.1 Transducin/WD40 repeat-like superfamily protein1.1e-3875.76Show/hide
Query:  MDEIVVPLRWCPPSGSPTFSTGSQSAHWDSIMPLGTLQPAPCMRDVPKLSPVVAHRVHTESLSGLIFTQESILTACREGHVKIWMRPS-SETQSSNSES
        MDEIVVPLR   P GSPT+STGS SAHWD+++P+GTLQPAPC RDVPKLSP++AHRVHTE LSGL+FTQES++TACREGH+KIW RPS SETQ+++SE+
Subjt:  MDEIVVPLRWCPPSGSPTFSTGSQSAHWDSIMPLGTLQPAPCMRDVPKLSPVVAHRVHTESLSGLIFTQESILTACREGHVKIWMRPS-SETQSSNSES


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGAGATCGTTGTTCCTCTTCGGTGGTGCCCTCCCAGTGGATCCCCGACATTTAGCACCGGAAGCCAGTCAGCACATTGGGATAGCATTATGCCATTAGGGACTCT
TCAACCTGCTCCATGCATGAGGGACGTTCCTAAACTTTCTCCAGTGGTCGCTCACCGTGTCCATACTGAATCCTTATCTGGCTTAATTTTTACCCAAGAGTCTATTCTCA
CAGCATGTCGAGAAGGACATGTGAAGATTTGGATGAGACCATCCTCCGAAACCCAATCGAGCAACTCAGAATCCCTCGTCGGTTCTACTATGTCGGCAGGCACCAAAATT
GGCTCCTCTACTTTGAAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGATGAGATCGTTGTTCCTCTTCGGTGGTGCCCTCCCAGTGGATCCCCGACATTTAGCACCGGAAGCCAGTCAGCACATTGGGATAGCATTATGCCATTAGGGACTCT
TCAACCTGCTCCATGCATGAGGGACGTTCCTAAACTTTCTCCAGTGGTCGCTCACCGTGTCCATACTGAATCCTTATCTGGCTTAATTTTTACCCAAGAGTCTATTCTCA
CAGCATGTCGAGAAGGACATGTGAAGATTTGGATGAGACCATCCTCCGAAACCCAATCGAGCAACTCAGAATCCCTCGTCGGTTCTACTATGTCGGCAGGCACCAAAATT
GGCTCCTCTACTTTGAAGTAG
Protein sequenceShow/hide protein sequence
MDEIVVPLRWCPPSGSPTFSTGSQSAHWDSIMPLGTLQPAPCMRDVPKLSPVVAHRVHTESLSGLIFTQESILTACREGHVKIWMRPSSETQSSNSESLVGSTMSAGTKI
GSSTLK