; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0027430 (gene) of Chayote v1 genome

Gene IDSed0027430
OrganismSechium edule (Chayote v1)
DescriptionBEST Arabidopsis thaliana protein match is: Ribonuclease H-like superfamily protein .
Genome locationLG02:36522514..36524938
RNA-Seq ExpressionSed0027430
SyntenySed0027430
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR026960 - Reverse transcriptase zinc-binding domain
IPR036397 - Ribonuclease H superfamily
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022158377.1 uncharacterized protein LOC111024874 [Momordica charantia]1.8e-5128.82Show/hide
Query:  FDFPWIPRAHSFKLATIPRREDMHRCVGDFISNEGNWDIQKLESMLWPVDIEIVLSVPICNSRTPYGWMWHFSRDGVFSVKSAYKLCISSKEAEATSCSG
        F  PW+PR  +FK         +   V  FI+ +GNWD+  +       D +++LS+PI +      W+WH+ + G +SV+S YKL +  K    ++ + 
Subjt:  FDFPWIPRAHSFKLATIPRREDMHRCVGDFISNEGNWDIQKLESMLWPVDIEIVLSVPICNSRTPYGWMWHFSRDGVFSVKSAYKLCISSKEAEATSCSG

Query:  VELDWWRNFWATPIPSKVRILIWRVFHNFLPVAQNLFARHIIQSPNCISC-NKVESALHTFFGCRRLKAFWKGLLP-VALPPIDYNGNIKDLLFFLGSKL
             W + W   +P+K++I IWR  H  +P AQNL  R I + P C  C ++ ES +H FF C+R +  W+ L P +     + N +  +L   L  +L
Subjt:  VELDWWRNFWATPIPSKVRILIWRVFHNFLPVAQNLFARHIIQSPNCISC-NKVESALHTFFGCRRLKAFWKGLLP-VALPPIDYNGNIKDLLFFLGSKL

Query:  PQQSFALLCVGMWAAWNDRNSLLRGEKIMPFEDRILWVLDYL-REFQAVNNINGPKTKLASRTEIADEEFCWCPPSGDDLTLNVDATCAEDRFRVGFGAV
          +   L  +  W  WNDRNSL+ G+++ P E +  W+  +L    QA  +   P+T+   R  +      W P S   L LN DA C        FG +
Subjt:  PQQSFALLCVGMWAAWNDRNSLLRGEKIMPFEDRILWVLDYL-REFQAVNNINGPKTKLASRTEIADEEFCWCPPSGDDLTLNVDATCAEDRFRVGFGAV

Query:  VRDHAGKCLVASAKCVSFILESSAAEALALLHGMRLVVELDLKVTKIEIDAKIIVEAVLNDRWRKSSLGTIIGEIRELLFSQCFKDLAFIPRNRNQVANG
        +RD +   + A++  V F L    AE   +L G++     +    ++E D+ + ++ + N+   +      + EI+ L     F   +   R  N+ A+G
Subjt:  VRDHAGKCLVASAKCVSFILESSAAEALALLHGMRLVVELDLKVTKIEIDAKIIVEAVLNDRWRKSSLGTIIGEIRELLFSQCFKDLAFIPRNRNQVANG

Query:  VAKWAV
        +AKW +
Subjt:  VAKWAV

XP_030496634.1 uncharacterized protein LOC115712492 [Cannabis sativa]1.0e-4928.95Show/hide
Query:  WIPRAHSFKLATIPRREDMHRCVGDFISNEGNWDIQKLESMLWPVDIEIVLSVPICNSRTPYGWMWHFSRDGVFSVKSAYKLCISSKEAEATSCSGVELD
        WIP    FK  +    + M   V  FI+++  W+I  L      +D++ ++++P+   +T    +WH +  G ++V S + L  +  E + T  S     
Subjt:  WIPRAHSFKLATIPRREDMHRCVGDFISNEGNWDIQKLESMLWPVDIEIVLSVPICNSRTPYGWMWHFSRDGVFSVKSAYKLCISSKEAEATSCSGVELD

Query:  WWRNFWATPIPSKVRILIWRVFHNFLPVAQNLFARHIIQSPNCISCNKV-ESALHTFFGCRRLKAFWKGLLPVALPPIDYNGNIKDLLFFLGSKLPQQSF
        WW+ FW   +PSKV+I  WRV  N LPVA  L  R +I S  C  CN   ES  H  F C   +  W+           +N    D L  L S   +Q  
Subjt:  WWRNFWATPIPSKVRILIWRVFHNFLPVAQNLFARHIIQSPNCISCNKV-ESALHTFFGCRRLKAFWKGLLPVALPPIDYNGNIKDLLFFLGSKLPQQSF

Query:  ALLCVGMWAAWNDRNSLLRGEKIMPFEDRILWVLDYLREFQAV--------NNINGPKTKLASRTE---------IADEEFCWCPPSGDDLTLNVDATCA
         L+   MWA W++RN ++ G       D   +   +L ++Q          N+ N   +  AS +E          ++ +  W PP    L +NVDA   
Subjt:  ALLCVGMWAAWNDRNSLLRGEKIMPFEDRILWVLDYLREFQAV--------NNINGPKTKLASRTE---------IADEEFCWCPPSGDDLTLNVDATCA

Query:  EDRFRVGFGAVVRDHAGKCLVASAKCVSFILESSAAEALALLHGMRLVVELDLKVTKIEIDAKIIVEAVLNDRWRKSSLGTIIGEIRELLFSQCFKDLAF
        +++  +G GA++RDH G  + A +K V     S   EA AL H +   ++L L +T +E DA  +  A+ +     SS   +I ++  LL       ++ 
Subjt:  EDRFRVGFGAVVRDHAGKCLVASAKCVSFILESSAAEALALLHGMRLVVELDLKVTKIEIDAKIIVEAVLNDRWRKSSLGTIIGEIRELLFSQCFKDLAF

Query:  IPRNRNQVANGVAKWAVK
        + RN NQ A+G+AK+A++
Subjt:  IPRNRNQVANGVAKWAVK

XP_030497600.1 uncharacterized protein LOC115713257 [Cannabis sativa]2.6e-5030.49Show/hide
Query:  WIPRAHSFKLATIPRREDMHRCVGDFISNEGNWDIQKLESMLWPVDIEIVLSVPICNSRTPYGWMWHFSRDGVFSVKSAYKLCISSKEAEATSCSGVELD
        WIP    FK   +         V D+I++   WD++ L +   P DI+ +L++P+  + T   W WH+   G ++VKS Y L  S +  + +S S  +  
Subjt:  WIPRAHSFKLATIPRREDMHRCVGDFISNEGNWDIQKLESMLWPVDIEIVLSVPICNSRTPYGWMWHFSRDGVFSVKSAYKLCISSKEAEATSCSGVELD

Query:  WWRNFWATPIPSKVRILIWRVFHNFLPVAQNLFARHIIQSPNCISCNKV-ESALHTFFGCRRLKAFWKGL---LPVALPPIDYNGNIKDLLFFLGSKLPQ
        WW+ FW   +PSKVRI  WRV ++ LPVAQNLF R +I S  C  C++  ES  H  F C   K+ W+     L         +G   D L FL + L +
Subjt:  WWRNFWATPIPSKVRILIWRVFHNFLPVAQNLFARHIIQSPNCISCNKV-ESALHTFFGCRRLKAFWKGL---LPVALPPIDYNGNIKDLLFFLGSKLPQ

Query:  QSFALLCVGMWAAWNDRNSLLRGEKIMPFEDRILWVLDYLREFQAVNNINGPKTKLASRTEIADEEFC-WCPPSGDDLTLNVDATCAEDRFRVGFGAVVR
             L   MW  W+DRN+ +  +++            YL  F +V +   P     +    AD     W PP+  +L +NVDA     R ++G G ++R
Subjt:  QSFALLCVGMWAAWNDRNSLLRGEKIMPFEDRILWVLDYLREFQAVNNINGPKTKLASRTEIADEEFC-WCPPSGDDLTLNVDATCAEDRFRVGFGAVVR

Query:  DHAGKCLVASAKCVSFILESSAAEALALLHGMRLVVELDLKVTKIEIDAKIIVEAVLNDRWRKSSLGTIIGEIRELLFSQCFKDLAFIPRNRNQVANGVA
        D  G+ + A +K V    +S   EA A+  G++   +L L+   +E D  ++V A+   + + SS   ++ +I   L S     ++ + R+ NQ A+G+A
Subjt:  DHAGKCLVASAKCVSFILESSAAEALALLHGMRLVVELDLKVTKIEIDAKIIVEAVLNDRWRKSSLGTIIGEIRELLFSQCFKDLAFIPRNRNQVANGVA

Query:  KWAVKNGCEC
        K A++   +C
Subjt:  KWAVKNGCEC

XP_030502555.1 uncharacterized protein LOC115717715 [Cannabis sativa]1.2e-5030.56Show/hide
Query:  WIPRAHSFKLATIPRR--EDMHRCVGDFISNEGNWDIQKLESMLWPVDIEIVLSVPICNSRTPYGWMWHFSRDGVFSVKSAYKLCISSKEAEATSCSGVE
        WIP    FK    P R     +  V  +I++   W+ + L     P D+E +L++P+  +     W+WH+   G ++VKS Y L  S +  + TS SG +
Subjt:  WIPRAHSFKLATIPRR--EDMHRCVGDFISNEGNWDIQKLESMLWPVDIEIVLSVPICNSRTPYGWMWHFSRDGVFSVKSAYKLCISSKEAEATSCSGVE

Query:  LDWWRNFWATPIPSKVRILIWRVFHNFLPVAQNLFARHIIQSPNCISCNKV-ESALHTFFGCRRLKAFWKGL-LPVALPPIDYNGNIKDLLFFLGSKLPQ
          WW+ FW   +PSKVRI  W+V ++ LPVA NLF R +I S  C  C++V ES  H  F C   KA W+     +      Y  +  D L FL + L  
Subjt:  LDWWRNFWATPIPSKVRILIWRVFHNFLPVAQNLFARHIIQSPNCISCNKV-ESALHTFFGCRRLKAFWKGL-LPVALPPIDYNGNIKDLLFFLGSKLPQ

Query:  QSFALLCVGMWAAWNDRNSLLRGEKIMPFEDRILWVLDYLREFQAVNNINGPKTKLASRTEIADEEFCWCPPSGDDLTLNVDATCAEDRFRVGFGAVVRD
             L   MW  W+DRN+ + G+++            YL  F   N++    T    R         W PP    L +NVDA     R ++G G ++RD
Subjt:  QSFALLCVGMWAAWNDRNSLLRGEKIMPFEDRILWVLDYLREFQAVNNINGPKTKLASRTEIADEEFCWCPPSGDDLTLNVDATCAEDRFRVGFGAVVRD

Query:  HAGKCLVASAKCVSFILESSAAEALALLHGMRLVVELDLKVTKIEIDAKIIVEAVLNDRWRKSSLGTIIGEIRELLFSQCFKDLAFIPRNRNQVANGVAK
         +G  + A +K      +S   EA A+  G++L  +L L++  +E D  ++V A+   + + SS   ++ +I   L S     ++ + R+ NQ A+G+AK
Subjt:  HAGKCLVASAKCVSFILESSAAEALALLHGMRLVVELDLKVTKIEIDAKIIVEAVLNDRWRKSSLGTIIGEIRELLFSQCFKDLAFIPRNRNQVANGVAK

Query:  WAVKNGCEC
         A++   +C
Subjt:  WAVKNGCEC

XP_030509188.1 uncharacterized protein LOC115723863 [Cannabis sativa]3.5e-4729.82Show/hide
Query:  DMHRCVGDFISNEGNWDIQKLESMLWPVDIEIVLSVPICNSRTPYGWMWHFSRDGVFSVKSAYKLCISSKEAEATSCSGVELDWWRNFWATPIPSKVRIL
        D +  V D I+ +  WD+  L +     D++ +LS+P+         +W  S  G+++VKS Y+L +S  E + T+ S    +WW  FW   +P KVRI 
Subjt:  DMHRCVGDFISNEGNWDIQKLESMLWPVDIEIVLSVPICNSRTPYGWMWHFSRDGVFSVKSAYKLCISSKEAEATSCSGVELDWWRNFWATPIPSKVRIL

Query:  IWRVFHNFLPVAQNLFARHIIQSPNCISCNKVESAL-HTFFGCRRLKAFWKGLLPVALPPIDYN----GNIKDLLFFLGSKLPQQSFALLCVGMWAAWND
        +W+VFH+ LPVA  LF RHI  SP+C  CN  E ++ H  F C R KA W+    ++   ID++        D+L  L + L    F L  V  W  W++
Subjt:  IWRVFHNFLPVAQNLFARHIIQSPNCISCNKVESAL-HTFFGCRRLKAFWKGLLPVALPPIDYN----GNIKDLLFFLGSKLPQQSFALLCVGMWAAWND

Query:  RNSLLRGEKIMPFEDRILWVLDYLREFQAVNNINGPKT--KLASRTEIADEEFC----WCPPSGDDLTLNVDATCAEDRFRVGFGAVVRDHAGKCLVASA
        RN++  G  +   +    +   YL EFQ         T   +A+       EF     W  P    L LN DA   + R +VG GA +R+  G  + A +
Subjt:  RNSLLRGEKIMPFEDRILWVLDYLREFQAVNNINGPKT--KLASRTEIADEEFC----WCPPSGDDLTLNVDATCAEDRFRVGFGAVVRDHAGKCLVASA

Query:  KCVSFILESSAAEALALLHGMRLVVELDLKVTKIEIDAKIIVEAVLNDRWRKSSLGTIIGEIRELLFSQCFKDLAFIPRNRNQVANGVAKWAVKNGCEC
        K +    ++   EA+ L   +  ++  +L V  IE D+ ++V+ +L+ +   S+   I+  I  L+       +  + R+ N  A+ +AK+A+    EC
Subjt:  KCVSFILESSAAEALALLHGMRLVVELDLKVTKIEIDAKIIVEAVLNDRWRKSSLGTIIGEIRELLFSQCFKDLAFIPRNRNQVANGVAKWAVKNGCEC

TrEMBL top hitse value%identityAlignment
A0A6J1DX30 uncharacterized protein LOC1110248748.8e-5228.82Show/hide
Query:  FDFPWIPRAHSFKLATIPRREDMHRCVGDFISNEGNWDIQKLESMLWPVDIEIVLSVPICNSRTPYGWMWHFSRDGVFSVKSAYKLCISSKEAEATSCSG
        F  PW+PR  +FK         +   V  FI+ +GNWD+  +       D +++LS+PI +      W+WH+ + G +SV+S YKL +  K    ++ + 
Subjt:  FDFPWIPRAHSFKLATIPRREDMHRCVGDFISNEGNWDIQKLESMLWPVDIEIVLSVPICNSRTPYGWMWHFSRDGVFSVKSAYKLCISSKEAEATSCSG

Query:  VELDWWRNFWATPIPSKVRILIWRVFHNFLPVAQNLFARHIIQSPNCISC-NKVESALHTFFGCRRLKAFWKGLLP-VALPPIDYNGNIKDLLFFLGSKL
             W + W   +P+K++I IWR  H  +P AQNL  R I + P C  C ++ ES +H FF C+R +  W+ L P +     + N +  +L   L  +L
Subjt:  VELDWWRNFWATPIPSKVRILIWRVFHNFLPVAQNLFARHIIQSPNCISC-NKVESALHTFFGCRRLKAFWKGLLP-VALPPIDYNGNIKDLLFFLGSKL

Query:  PQQSFALLCVGMWAAWNDRNSLLRGEKIMPFEDRILWVLDYL-REFQAVNNINGPKTKLASRTEIADEEFCWCPPSGDDLTLNVDATCAEDRFRVGFGAV
          +   L  +  W  WNDRNSL+ G+++ P E +  W+  +L    QA  +   P+T+   R  +      W P S   L LN DA C        FG +
Subjt:  PQQSFALLCVGMWAAWNDRNSLLRGEKIMPFEDRILWVLDYL-REFQAVNNINGPKTKLASRTEIADEEFCWCPPSGDDLTLNVDATCAEDRFRVGFGAV

Query:  VRDHAGKCLVASAKCVSFILESSAAEALALLHGMRLVVELDLKVTKIEIDAKIIVEAVLNDRWRKSSLGTIIGEIRELLFSQCFKDLAFIPRNRNQVANG
        +RD +   + A++  V F L    AE   +L G++     +    ++E D+ + ++ + N+   +      + EI+ L     F   +   R  N+ A+G
Subjt:  VRDHAGKCLVASAKCVSFILESSAAEALALLHGMRLVVELDLKVTKIEIDAKIIVEAVLNDRWRKSSLGTIIGEIRELLFSQCFKDLAFIPRNRNQVANG

Query:  VAKWAV
        +AKW +
Subjt:  VAKWAV

A0A803PIB6 Uncharacterized protein1.3e-5030.49Show/hide
Query:  WIPRAHSFKLATIPRREDMHRCVGDFISNEGNWDIQKLESMLWPVDIEIVLSVPICNSRTPYGWMWHFSRDGVFSVKSAYKLCISSKEAEATSCSGVELD
        WIP    FK   +         V D+I++   WD++ L +   P DI+ +L++P+  + T   W WH+   G ++VKS Y L  S +  + +S S  +  
Subjt:  WIPRAHSFKLATIPRREDMHRCVGDFISNEGNWDIQKLESMLWPVDIEIVLSVPICNSRTPYGWMWHFSRDGVFSVKSAYKLCISSKEAEATSCSGVELD

Query:  WWRNFWATPIPSKVRILIWRVFHNFLPVAQNLFARHIIQSPNCISCNKV-ESALHTFFGCRRLKAFWKGL---LPVALPPIDYNGNIKDLLFFLGSKLPQ
        WW+ FW   +PSKVRI  WRV ++ LPVAQNLF R +I S  C  C++  ES  H  F C   K+ W+     L         +G   D L FL + L +
Subjt:  WWRNFWATPIPSKVRILIWRVFHNFLPVAQNLFARHIIQSPNCISCNKV-ESALHTFFGCRRLKAFWKGL---LPVALPPIDYNGNIKDLLFFLGSKLPQ

Query:  QSFALLCVGMWAAWNDRNSLLRGEKIMPFEDRILWVLDYLREFQAVNNINGPKTKLASRTEIADEEFC-WCPPSGDDLTLNVDATCAEDRFRVGFGAVVR
             L   MW  W+DRN+ +  +++            YL  F +V +   P     +    AD     W PP+  +L +NVDA     R ++G G ++R
Subjt:  QSFALLCVGMWAAWNDRNSLLRGEKIMPFEDRILWVLDYLREFQAVNNINGPKTKLASRTEIADEEFC-WCPPSGDDLTLNVDATCAEDRFRVGFGAVVR

Query:  DHAGKCLVASAKCVSFILESSAAEALALLHGMRLVVELDLKVTKIEIDAKIIVEAVLNDRWRKSSLGTIIGEIRELLFSQCFKDLAFIPRNRNQVANGVA
        D  G+ + A +K V    +S   EA A+  G++   +L L+   +E D  ++V A+   + + SS   ++ +I   L S     ++ + R+ NQ A+G+A
Subjt:  DHAGKCLVASAKCVSFILESSAAEALALLHGMRLVVELDLKVTKIEIDAKIIVEAVLNDRWRKSSLGTIIGEIRELLFSQCFKDLAFIPRNRNQVANGVA

Query:  KWAVKNGCEC
        K A++   +C
Subjt:  KWAVKNGCEC

A0A803Q8I6 Uncharacterized protein7.4e-5129.54Show/hide
Query:  WIPRAHSFKLATIPRREDMHRCVGDFISNEGNWDIQKLESMLWPVDIEIVLSVPICNSRTPYGWMWHFSRDGVFSVKSAYKLCISSKEAEATSCSGVELD
        WIP    FK  +    + +   V +FI+N+  W+I  L      +D++ ++++P+    +    +WH +  G ++V S + L  +  E + T+ S     
Subjt:  WIPRAHSFKLATIPRREDMHRCVGDFISNEGNWDIQKLESMLWPVDIEIVLSVPICNSRTPYGWMWHFSRDGVFSVKSAYKLCISSKEAEATSCSGVELD

Query:  WWRNFWATPIPSKVRILIWRVFHNFLPVAQNLFARHIIQSPNCISCNKV-ESALHTFFGCRRLKAFWKGLLPVALPPIDYNGNIKDLLFFLGSKLPQQSF
        WWR FW+  +P KV+I  WRV  N LPVA +L  R +I S  C  CN   ES  H  F C + +  W+           +N    D L  L S   +Q F
Subjt:  WWRNFWATPIPSKVRILIWRVFHNFLPVAQNLFARHIIQSPNCISCNKV-ESALHTFFGCRRLKAFWKGLLPVALPPIDYNGNIKDLLFFLGSKLPQQSF

Query:  ALLCVGMWAAWNDRNSLLRGEKIMPFEDRILWVLDYLREF---------QAVN---NINGPKTKLASRTEIADEEFCWCPPSGDDLTLNVDATCAEDRFR
         L+   MWA W+DRN +++G    P +    +   +L ++         Q +N   + +   T +  + +I+D    W PPS   L +NVD    ++R  
Subjt:  ALLCVGMWAAWNDRNSLLRGEKIMPFEDRILWVLDYLREF---------QAVN---NINGPKTKLASRTEIADEEFCWCPPSGDDLTLNVDATCAEDRFR

Query:  VGFGAVVRDHAGKCLVASAKCVSFILESSAAEALALLHGMRLVVELDLKVTKIEIDAKIIVEAVLNDRWRKSSLGTIIGEIRELLFSQCFKDLAFIPRNR
        +G GA+VRDH G  + A +K V     S   EA AL H +   ++L L++T ++ DA  +  A+ +     SS   +I ++  LL       ++ + RN 
Subjt:  VGFGAVVRDHAGKCLVASAKCVSFILESSAAEALALLHGMRLVVELDLKVTKIEIDAKIIVEAVLNDRWRKSSLGTIIGEIRELLFSQCFKDLAFIPRNR

Query:  NQVANGVAKWAVK
        NQ A+G+AK+A++
Subjt:  NQVANGVAKWAVK

A0A803QH07 Uncharacterized protein7.4e-5130.02Show/hide
Query:  PWIPRAHSFKLATIPRREDMHRCVGDFISNEGNWDIQKLESMLWPVDIEIVLSVPICNSRTPYGWMWHFSRDGVFSVKSAYKLCISSKEAEATSCSGVEL
        PWIP   SF+  +      +   V   I++   W+   L     P+D+E +LS+P+    T    +WH S  G ++VKS + L    ++   +S S    
Subjt:  PWIPRAHSFKLATIPRREDMHRCVGDFISNEGNWDIQKLESMLWPVDIEIVLSVPICNSRTPYGWMWHFSRDGVFSVKSAYKLCISSKEAEATSCSGVEL

Query:  DWWRNFWATPIPSKVRILIWRVFHNFLPVAQNLFARHIIQSPNCISCNKV-ESALHTFFGCRRLKAFWKG---LLPVALPPIDYNGNIKDLLFFLGSKLP
        DWW+ FW   +P K+RI  W+V  + LPVA  LF R +I S  C  CN   ES  H  FGC   K  WK    ++        +NG   D L +L +   
Subjt:  DWWRNFWATPIPSKVRILIWRVFHNFLPVAQNLFARHIIQSPNCISCNKV-ESALHTFFGCRRLKAFWKG---LLPVALPPIDYNGNIKDLLFFLGSKLP

Query:  QQSFALLCVGMWAAWNDRNSLLRGEKIMPFEDRILWVLDYLREFQAVNNINGPKTKLA---------SRTEIADEEFCWCPPSGDDLTLNVDATCAEDRF
        Q+ F L    +W  W DRN +  G K       I +   + R++    +++   T  A         S  +   +   W PP+ +   LNVDA    D+ 
Subjt:  QQSFALLCVGMWAAWNDRNSLLRGEKIMPFEDRILWVLDYLREFQAVNNINGPKTKLA---------SRTEIADEEFCWCPPSGDDLTLNVDATCAEDRF

Query:  RVGFGAVVRDHAGKCLVASAKCVSFILESSAAEALALLHGMRLVVELDLKVTKIEIDAKIIVEAVLNDRWRKSSLGTIIGEIRELLFSQCFKDLAFIPRN
        ++G GA++R H G  + A +K V     S   EA AL H +  V +  L +T IE DA  +  A+ + +   S    +I +IR LL       ++   R+
Subjt:  RVGFGAVVRDHAGKCLVASAKCVSFILESSAAEALALLHGMRLVVELDLKVTKIEIDAKIIVEAVLNDRWRKSSLGTIIGEIRELLFSQCFKDLAFIPRN

Query:  RNQVANGVAKWAV
         NQ A+G+A++A+
Subjt:  RNQVANGVAKWAV

A0A803QHU6 Uncharacterized protein2.8e-5030.83Show/hide
Query:  PWIPRAHSFKLATIPRREDMHRCVGDFISNEGNWDIQKLESMLWPVDIEIVLSVPICNSRTPYGWMWHFSRDGVFSVKSAYKLCISSKEAEATSCSGVEL
        PWI   + FK  +      +   V  FI+ E  W++  L +   P+D + +L++P+         +WHF+ +G+++V+S + L  S +E   +S S  + 
Subjt:  PWIPRAHSFKLATIPRREDMHRCVGDFISNEGNWDIQKLESMLWPVDIEIVLSVPICNSRTPYGWMWHFSRDGVFSVKSAYKLCISSKEAEATSCSGVEL

Query:  DWWRNFWATPIPSKVRILIWRVFHNFLPVAQNLFARHIIQSPNCISC-NKVESALHTFFGCRRLKAFWK---GLLPVALPPIDYNGNIKDLLFFLGSKLP
        DWW+ FW   +P K+RI +W+V HN LP A  LF + ++ S  C  C +  ES  H  FGC+  KA WK     L ++     +NG   D L  L + L 
Subjt:  DWWRNFWATPIPSKVRILIWRVFHNFLPVAQNLFARHIIQSPNCISC-NKVESALHTFFGCRRLKAFWK---GLLPVALPPIDYNGNIKDLLFFLGSKLP

Query:  QQSFALLCVGMWAAWNDRNSLLRGEKIMPFEDRILWVLDYLREFQAVNNINGP----KTKLASRTEIADEEFC--WCPPSGDDLTLNVDATCAEDRFRVG
        QQ F LL   +W  W DRN ++ G         I + + +  +F    N+  P      K  + T  A  +    W PP  +   LNVDA    D+ ++G
Subjt:  QQSFALLCVGMWAAWNDRNSLLRGEKIMPFEDRILWVLDYLREFQAVNNINGP----KTKLASRTEIADEEFC--WCPPSGDDLTLNVDATCAEDRFRVG

Query:  FGAVVRDHAGKCLVASAKCVSFILESSAAEALALLHGMRLVVELDLKVTKIEIDAKIIVEAVLNDRWRKSSLGTIIGEIRELL--FSQCFKDLAFIPRNR
         GA++RDH G  + A +K       S   EA AL H +   ++  L +T IE DA  +  A+ +     S    II ++R LL  F Q    +  + R+ 
Subjt:  FGAVVRDHAGKCLVASAKCVSFILESSAAEALALLHGMRLVVELDLKVTKIEIDAKIIVEAVLNDRWRKSSLGTIIGEIRELL--FSQCFKDLAFIPRNR

Query:  NQVANGVAKWAV
        NQ A+G+A++++
Subjt:  NQVANGVAKWAV

SwissProt top hitse value%identityAlignment
P0C2F6 Putative ribonuclease H protein At1g657502.7e-1322.09Show/hide
Query:  WHFSRDGVFSVKSAYKLCISSKEAEATSCSGVELDWWRNFWATPIPSKVRILIWRVFHNFLPVAQNLFARHIIQSPNCISC-NKVESALHTFFGCRRLKA
        W FS+DG FSV+SAY++    +       S     ++   W   +P +V+  +W V +  +   +    RH+  S  C  C   VES LH    C     
Subjt:  WHFSRDGVFSVKSAYKLCISSKEAEATSCSGVELDWWRNFWATPIPSKVRILIWRVFHNFLPVAQNLFARHIIQSPNCISC-NKVESALHTFFGCRRLKA

Query:  FWKGLLPVALPPIDYNGNIKDLLF-FLGSKLPQQSF---ALLCVGMWAAWNDRNSLLRGEKIMPFEDRILWVLDYLREFQAVNNINGPKTKLASRTEIAD
         W  ++P       ++ ++ + L+  LG +   +      +  V +W  W  R   + GE      DR+ +V ++  E    ++ N     L   T+   
Subjt:  FWKGLLPVALPPIDYNGNIKDLLF-FLGSKLPQQSF---ALLCVGMWAAWNDRNSLLRGEKIMPFEDRILWVLDYLREFQAVNNINGPKTKLASRTEIAD

Query:  EEFC-WCPPSGDDLTLNVDATCAEDRFRVGFGAVVRDHAGKCLVASAKCVSFIL-----ESSAAEALALLHGMRLVVELDLKVTKIEIDAKIIVEAVLND
        E    W  P    + +N D     +      G V+RD  G      A C  F L      +  AE   + +G+    E  +   ++E+D+++IV  +   
Subjt:  EEFC-WCPPSGDDLTLNVDATCAEDRFRVGFGAVVRDHAGKCLVASAKCVSFIL-----ESSAAEALALLHGMRLVVELDLKVTKIEIDAKIIVEAVLND

Query:  RWRKSSLGTIIGEIRELLFSQCFKDLAFIPRNRNQVANGVAKWA
              L  ++      L       +  + R  N++A+G+A +A
Subjt:  RWRKSSLGTIIGEIRELLFSQCFKDLAFIPRNRNQVANGVAKWA

Arabidopsis top hitse value%identityAlignment
AT2G22440.1 BEST Arabidopsis thaliana protein match is: Ribonuclease H-like superfamily protein (TAIR:AT4G29090.1)1.9e-0629.27Show/hide
Query:  PWIPRAHSFKLATIPRREDMHRCVGDFISNEGN-WDIQKLESMLWPVDIEIVLSVPICNSRTPYGWMWHFSRDGVFSVKSAY
        PWIP   +    +I    D    V D I    N W + +L++++ PVDI ++L +    +    G+ W  ++ G ++VKS Y
Subjt:  PWIPRAHSFKLATIPRREDMHRCVGDFISNEGN-WDIQKLESMLWPVDIEIVLSVPICNSRTPYGWMWHFSRDGVFSVKSAY

AT3G26855.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein2.9e-0735Show/hide
Query:  DWWRNFWATPIPSKVRILIWRVFHNFLPVAQNLFARHIIQSPNCISCNKVESALHTFFGC
        +W  + W+  I  K+++LIW+  +N LPV   L +R+I   P C  C   E+  H  F C
Subjt:  DWWRNFWATPIPSKVRILIWRVFHNFLPVAQNLFARHIIQSPNCISCNKVESALHTFFGC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTGATTTTCCTTGGATTCCAAGGGCCCATTCCTTCAAATTAGCTACTATTCCAAGAAGGGAAGATATGCATCGCTGTGTGGGAGATTTTATTTCTAATGAAGGAAA
TTGGGATATTCAGAAACTTGAGTCTATGCTTTGGCCAGTTGATATTGAGATTGTATTATCAGTTCCCATATGCAATTCTAGAACCCCTTATGGTTGGATGTGGCATTTTT
CTAGAGATGGGGTCTTTTCTGTCAAAAGTGCTTACAAACTATGCATAAGTAGCAAAGAAGCAGAAGCTACCTCTTGTTCTGGGGTTGAGCTAGATTGGTGGAGGAATTTT
TGGGCTACGCCAATCCCTTCGAAAGTAAGAATATTAATTTGGAGAGTTTTCCATAATTTTCTTCCTGTTGCCCAAAATCTTTTTGCTAGACATATTATTCAGTCCCCTAA
CTGCATCAGTTGTAATAAAGTGGAGTCAGCTCTTCATACTTTTTTTGGATGCAGGCGGTTGAAAGCCTTTTGGAAAGGTCTTTTGCCAGTAGCTCTGCCCCCGATTGATT
ATAACGGGAATATTAAGGATCTCTTGTTTTTTTTAGGAAGCAAATTGCCTCAACAAAGTTTTGCCCTTCTTTGTGTTGGAATGTGGGCAGCCTGGAATGATCGGAACAGT
TTATTAAGGGGGGAGAAGATAATGCCGTTTGAAGACAGAATTTTATGGGTTTTAGATTACCTGAGAGAATTTCAAGCAGTAAATAATATCAATGGGCCAAAAACCAAATT
GGCAAGCAGAACCGAAATAGCTGATGAAGAGTTTTGTTGGTGTCCTCCATCTGGGGACGATCTTACCCTTAATGTTGATGCAACTTGTGCAGAAGATCGTTTTCGTGTTG
GTTTTGGGGCCGTTGTCCGTGATCACGCTGGAAAGTGCTTGGTAGCCTCAGCAAAGTGTGTCTCTTTTATATTAGAGTCTTCTGCAGCGGAAGCTTTAGCTCTCCTCCAT
GGTATGAGATTGGTGGTTGAATTGGATCTGAAGGTGACGAAAATTGAGATAGATGCAAAAATAATTGTTGAAGCTGTGTTGAATGATCGTTGGAGAAAGTCTTCGTTGGG
AACCATTATTGGGGAAATTAGGGAGTTGTTATTTTCTCAATGTTTTAAGGATTTAGCTTTTATTCCCAGAAATAGAAATCAGGTTGCAAATGGTGTTGCTAAATGGGCCG
TGAAAAATGGCTGTGAGTGTAGCAGCAAGGCAAGCGACGTGGGTGGGCATGCACGGCGAAGTGGCTCGTCGGAGCAGCATGTGCGTGTTGCTGCGGGGCTAAGTGCAGCG
AGTAGCACGACGAGACGAGCTGGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTTGATTTTCCTTGGATTCCAAGGGCCCATTCCTTCAAATTAGCTACTATTCCAAGAAGGGAAGATATGCATCGCTGTGTGGGAGATTTTATTTCTAATGAAGGAAA
TTGGGATATTCAGAAACTTGAGTCTATGCTTTGGCCAGTTGATATTGAGATTGTATTATCAGTTCCCATATGCAATTCTAGAACCCCTTATGGTTGGATGTGGCATTTTT
CTAGAGATGGGGTCTTTTCTGTCAAAAGTGCTTACAAACTATGCATAAGTAGCAAAGAAGCAGAAGCTACCTCTTGTTCTGGGGTTGAGCTAGATTGGTGGAGGAATTTT
TGGGCTACGCCAATCCCTTCGAAAGTAAGAATATTAATTTGGAGAGTTTTCCATAATTTTCTTCCTGTTGCCCAAAATCTTTTTGCTAGACATATTATTCAGTCCCCTAA
CTGCATCAGTTGTAATAAAGTGGAGTCAGCTCTTCATACTTTTTTTGGATGCAGGCGGTTGAAAGCCTTTTGGAAAGGTCTTTTGCCAGTAGCTCTGCCCCCGATTGATT
ATAACGGGAATATTAAGGATCTCTTGTTTTTTTTAGGAAGCAAATTGCCTCAACAAAGTTTTGCCCTTCTTTGTGTTGGAATGTGGGCAGCCTGGAATGATCGGAACAGT
TTATTAAGGGGGGAGAAGATAATGCCGTTTGAAGACAGAATTTTATGGGTTTTAGATTACCTGAGAGAATTTCAAGCAGTAAATAATATCAATGGGCCAAAAACCAAATT
GGCAAGCAGAACCGAAATAGCTGATGAAGAGTTTTGTTGGTGTCCTCCATCTGGGGACGATCTTACCCTTAATGTTGATGCAACTTGTGCAGAAGATCGTTTTCGTGTTG
GTTTTGGGGCCGTTGTCCGTGATCACGCTGGAAAGTGCTTGGTAGCCTCAGCAAAGTGTGTCTCTTTTATATTAGAGTCTTCTGCAGCGGAAGCTTTAGCTCTCCTCCAT
GGTATGAGATTGGTGGTTGAATTGGATCTGAAGGTGACGAAAATTGAGATAGATGCAAAAATAATTGTTGAAGCTGTGTTGAATGATCGTTGGAGAAAGTCTTCGTTGGG
AACCATTATTGGGGAAATTAGGGAGTTGTTATTTTCTCAATGTTTTAAGGATTTAGCTTTTATTCCCAGAAATAGAAATCAGGTTGCAAATGGTGTTGCTAAATGGGCCG
TGAAAAATGGCTGTGAGTGTAGCAGCAAGGCAAGCGACGTGGGTGGGCATGCACGGCGAAGTGGCTCGTCGGAGCAGCATGTGCGTGTTGCTGCGGGGCTAAGTGCAGCG
AGTAGCACGACGAGACGAGCTGGGTGA
Protein sequenceShow/hide protein sequence
MFDFPWIPRAHSFKLATIPRREDMHRCVGDFISNEGNWDIQKLESMLWPVDIEIVLSVPICNSRTPYGWMWHFSRDGVFSVKSAYKLCISSKEAEATSCSGVELDWWRNF
WATPIPSKVRILIWRVFHNFLPVAQNLFARHIIQSPNCISCNKVESALHTFFGCRRLKAFWKGLLPVALPPIDYNGNIKDLLFFLGSKLPQQSFALLCVGMWAAWNDRNS
LLRGEKIMPFEDRILWVLDYLREFQAVNNINGPKTKLASRTEIADEEFCWCPPSGDDLTLNVDATCAEDRFRVGFGAVVRDHAGKCLVASAKCVSFILESSAAEALALLH
GMRLVVELDLKVTKIEIDAKIIVEAVLNDRWRKSSLGTIIGEIRELLFSQCFKDLAFIPRNRNQVANGVAKWAVKNGCECSSKASDVGGHARRSGSSEQHVRVAAGLSAA
SSTTRRAG