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Sed0027437 (gene) of Chayote v1 genome

Gene IDSed0027437
OrganismSechium edule (Chayote v1)
DescriptionArgininosuccinate lyase
Genome locationLG01:71028531..71030921
RNA-Seq ExpressionSed0027437
SyntenySed0027437
Gene Ontology termsGO:0042450 - arginine biosynthetic process via ornithine (biological process)
GO:0004056 - argininosuccinate lyase activity (molecular function)
InterPro domainsIPR008948 - L-Aspartase-like
IPR009049 - Argininosuccinate lyase
IPR024083 - Fumarase/histidase, N-terminal


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GER48637.1 argininosuccinate lyase [Striga asiatica]2.8e-1272Show/hide
Query:  MDSQVRLNFCPLGACALAGTGLPIDRFMTSGALGFSSPLRNRYLMYCIMK
        +D +VRLNFCPLGACALAGTGLPIDRFMTS ALGF +P+RNR+ ++ + K
Subjt:  MDSQVRLNFCPLGACALAGTGLPIDRFMTSGALGFSSPLRNRYLMYCIMK

KAF3781802.1 Argininosuccinate lyase [Nymphaea thermarum]4.8e-1264.29Show/hide
Query:  MDSQVRLNFCPLGACALAGTGLPIDRFMTSGALGFSSPLRNRYLMYCIMKSWLSPS
        ++ + RLNFCPLGACALAGTGLPI+RF TS ALGF++PLRNRY+ Y +++ +  PS
Subjt:  MDSQVRLNFCPLGACALAGTGLPIDRFMTSGALGFSSPLRNRYLMYCIMKSWLSPS

XP_022131833.1 argininosuccinate lyase, chloroplastic-like [Momordica charantia]2.8e-1290.24Show/hide
Query:  MDSQVRLNFCPLGACALAGTGLPIDRFMTSGALGFSSPLRN
        +D +VRLNFCPLGACALAGTGLPIDRFMTS ALGFSSPLRN
Subjt:  MDSQVRLNFCPLGACALAGTGLPIDRFMTSGALGFSSPLRN

XP_022861182.1 argininosuccinate lyase, chloroplastic-like [Olea europaea var. sylvestris]2.1e-1277.78Show/hide
Query:  MDSQVRLNFCPLGACALAGTGLPIDRFMTSGALGFSSPLRNRYLM
        +D + R+NFCPLGACALAGTGLPIDRFMTS ALGF++P+RNRYL+
Subjt:  MDSQVRLNFCPLGACALAGTGLPIDRFMTSGALGFSSPLRNRYLM

XP_042496530.1 argininosuccinate lyase, chloroplastic-like [Macadamia integrifolia]6.2e-1281.4Show/hide
Query:  MDSQVRLNFCPLGACALAGTGLPIDRFMTSGALGFSSPLRNRY
        +D +VRLNFCPLGACALAGTGLPI+RFMTS ALGF++P+RNRY
Subjt:  MDSQVRLNFCPLGACALAGTGLPIDRFMTSGALGFSSPLRNRY

TrEMBL top hitse value%identityAlignment
A0A1S4BZ30 argininosuccinate lyase, chloroplastic-like3.9e-1279.07Show/hide
Query:  MDSQVRLNFCPLGACALAGTGLPIDRFMTSGALGFSSPLRNRY
        +D + RLNFCPLGACALAGTGLPIDRFMTS +LGF++P+RNRY
Subjt:  MDSQVRLNFCPLGACALAGTGLPIDRFMTSGALGFSSPLRNRY

A0A5A7QW74 Argininosuccinate lyase1.4e-1272Show/hide
Query:  MDSQVRLNFCPLGACALAGTGLPIDRFMTSGALGFSSPLRNRYLMYCIMK
        +D +VRLNFCPLGACALAGTGLPIDRFMTS ALGF +P+RNR+ ++ + K
Subjt:  MDSQVRLNFCPLGACALAGTGLPIDRFMTSGALGFSSPLRNRYLMYCIMK

A0A5N5NMF3 Uncharacterized protein3.9e-1257.14Show/hide
Query:  MDSQVRLNFCPLGACALAGTGLPIDRFMTSGALGFSSPLRNR--YLMYCIMKSWLSPSRIARL
        +D ++R+NFCPLGACALAGTGLPIDRFMTS ALGF++P+RNR  + ++ I+  W+S   + ++
Subjt:  MDSQVRLNFCPLGACALAGTGLPIDRFMTSGALGFSSPLRNR--YLMYCIMKSWLSPSRIARL

A0A6J1BUL3 argininosuccinate lyase, chloroplastic-like1.4e-1290.24Show/hide
Query:  MDSQVRLNFCPLGACALAGTGLPIDRFMTSGALGFSSPLRN
        +D +VRLNFCPLGACALAGTGLPIDRFMTS ALGFSSPLRN
Subjt:  MDSQVRLNFCPLGACALAGTGLPIDRFMTSGALGFSSPLRN

A0A6J1K8P1 argininosuccinate lyase, chloroplastic-like3.9e-1287.8Show/hide
Query:  MDSQVRLNFCPLGACALAGTGLPIDRFMTSGALGFSSPLRN
        +D + RLNFCPLGACALAGTGLPIDRFMTS ALGFSSPLRN
Subjt:  MDSQVRLNFCPLGACALAGTGLPIDRFMTSGALGFSSPLRN

SwissProt top hitse value%identityAlignment
A3PMB7 Argininosuccinate lyase1.9e-0865Show/hide
Query:  DSQVRLNFCPLGACALAGTGLPIDRFMTSGALGFSSPLRN
        D++ R+N CPLGA ALAGTG PIDR MT+ ALGF  P  N
Subjt:  DSQVRLNFCPLGACALAGTGLPIDRFMTSGALGFSSPLRN

A5VAA0 Argininosuccinate lyase6.7e-0967.5Show/hide
Query:  DSQVRLNFCPLGACALAGTGLPIDRFMTSGALGFSSPLRN
        D++ RLN CPLG+ ALAGTG PIDR MT+ ALGF +P RN
Subjt:  DSQVRLNFCPLGACALAGTGLPIDRFMTSGALGFSSPLRN

Q0BWK6 Argininosuccinate lyase6.7e-0968.29Show/hide
Query:  MDSQVRLNFCPLGACALAGTGLPIDRFMTSGALGFSSPLRN
        +D  VRLN CPLGA ALAGTG PIDR MT+ ALGF+ P+ N
Subjt:  MDSQVRLNFCPLGACALAGTGLPIDRFMTSGALGFSSPLRN

Q3IZY2 Argininosuccinate lyase1.5e-0863.41Show/hide
Query:  MDSQVRLNFCPLGACALAGTGLPIDRFMTSGALGFSSPLRN
        +D++ R+N CPLGA ALAGTG PIDR MT+ ALGF  P  N
Subjt:  MDSQVRLNFCPLGACALAGTGLPIDRFMTSGALGFSSPLRN

Q9LEU8 Argininosuccinate lyase, chloroplastic4.9e-1275.61Show/hide
Query:  MDSQVRLNFCPLGACALAGTGLPIDRFMTSGALGFSSPLRN
        +D + RLNF PLGACALAGTGLPIDRFMT+ ALGF+ P+RN
Subjt:  MDSQVRLNFCPLGACALAGTGLPIDRFMTSGALGFSSPLRN

Arabidopsis top hitse value%identityAlignment
AT5G10920.1 L-Aspartase-like family protein3.5e-1375.61Show/hide
Query:  MDSQVRLNFCPLGACALAGTGLPIDRFMTSGALGFSSPLRN
        +D + RLNF PLGACALAGTGLPIDRFMT+ ALGF+ P+RN
Subjt:  MDSQVRLNFCPLGACALAGTGLPIDRFMTSGALGFSSPLRN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTCCCAAGTTAGACTAAATTTCTGCCCCTTAGGAGCTTGTGCATTGGCTGGTACTGGCCTCCCAATTGATCGATTCATGACTTCGGGTGCTTTAGGATTCTCTTC
TCCTTTGAGAAACAGATATCTGATGTATTGTATTATGAAGTCTTGGTTATCCCCCTCCAGAATTGCAAGATTGTCATCAGGCTTCGAGCAATTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGATTCCCAAGTTAGACTAAATTTCTGCCCCTTAGGAGCTTGTGCATTGGCTGGTACTGGCCTCCCAATTGATCGATTCATGACTTCGGGTGCTTTAGGATTCTCTTC
TCCTTTGAGAAACAGATATCTGATGTATTGTATTATGAAGTCTTGGTTATCCCCCTCCAGAATTGCAAGATTGTCATCAGGCTTCGAGCAATTTTAA
Protein sequenceShow/hide protein sequence
MDSQVRLNFCPLGACALAGTGLPIDRFMTSGALGFSSPLRNRYLMYCIMKSWLSPSRIARLSSGFEQF