CuGenDBv2

Gene ID	Sed0027459
Organism	Sechium edule (Chayote v1)
Description	NADH:ubiquinone oxidoreductase, ESSS subunit
Genome location	LG14:2038927..2039289
RNA-Seq Expression	Sed0027459
Synteny	Sed0027459
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

XP_022151653.1 uncharacterized protein LOC111019565 [Momordica charantia]

9.2e-59

93.33

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Query:  MPSPTPFTAASNMLRHRLLPSLRTRGGAAAGPSRWTSPGHEERPKGYLFNRTPPPPGQSRKWEDWELPCYITSFLTIVILGVGLNAKPDLTIETWAHQKA
        MPSP PFT ASNMLRHRLLP+LRTRGGAAAG SRWTSPGHEERPKGYLFNRTPPPPGQSRKWEDWELPCYITSFLTIVILGVGLNAKPDLTIETWAHQKA
Subjt:  MPSPTPFTAASNMLRHRLLPSLRTRGGAAAGPSRWTSPGHEERPKGYLFNRTPPPPGQSRKWEDWELPCYITSFLTIVILGVGLNAKPDLTIETWAHQKA

Query:  LERLEMENLALSDSGSSESD
        LERLEMEN+ +S SGSSESD
Subjt:  LERLEMENLALSDSGSSESD

XP_022925065.1 uncharacterized protein LOC111432424 [Cucurbita moschata]

4.1e-59

93.33

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Query:  MPSPTPFTAASNMLRHRLLPSLRTRGGAAAGPSRWTSPGHEERPKGYLFNRTPPPPGQSRKWEDWELPCYITSFLTIVILGVGLNAKPDLTIETWAHQKA
        MPSPTPF  ASNMLRHRLLPSLRTRGGAA G SRWTSPGHEE+PKGYLFNRTPPPPGQSRKWEDWELPCY+TSFLTIVILGVGLNAKPDLTIETWAHQKA
Subjt:  MPSPTPFTAASNMLRHRLLPSLRTRGGAAAGPSRWTSPGHEERPKGYLFNRTPPPPGQSRKWEDWELPCYITSFLTIVILGVGLNAKPDLTIETWAHQKA

Query:  LERLEMENLALSDSGSSESD
        LERLEMENLA+S SGSSESD
Subjt:  LERLEMENLALSDSGSSESD

XP_022966491.1 uncharacterized protein LOC111466129 [Cucurbita maxima]

5.4e-59

93.33

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Query:  MPSPTPFTAASNMLRHRLLPSLRTRGGAAAGPSRWTSPGHEERPKGYLFNRTPPPPGQSRKWEDWELPCYITSFLTIVILGVGLNAKPDLTIETWAHQKA
        MPSPTPF  ASNMLRHRLLPSLRTRGGAA G SRWTSPGHEE+PKGYLFNRTPPPPGQSRKWEDWELPCY+TSFLTIVILGVGLNAKPDLTIETWAHQKA
Subjt:  MPSPTPFTAASNMLRHRLLPSLRTRGGAAAGPSRWTSPGHEERPKGYLFNRTPPPPGQSRKWEDWELPCYITSFLTIVILGVGLNAKPDLTIETWAHQKA

Query:  LERLEMENLALSDSGSSESD
        LERLEMENLA+S SGSSESD
Subjt:  LERLEMENLALSDSGSSESD

XP_023517134.1 uncharacterized protein LOC111780983 [Cucurbita pepo subsp. pepo]

2.4e-59

94.17

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Query:  MPSPTPFTAASNMLRHRLLPSLRTRGGAAAGPSRWTSPGHEERPKGYLFNRTPPPPGQSRKWEDWELPCYITSFLTIVILGVGLNAKPDLTIETWAHQKA
        MPSPTPF  ASNMLRHRLLPSLRTRGGAA G SRWTSPGHEERPKGYLFNRTPPPPGQSRKWEDWELPCY+TSFLTIVILGVGLNAKPDLTIETWAHQKA
Subjt:  MPSPTPFTAASNMLRHRLLPSLRTRGGAAAGPSRWTSPGHEERPKGYLFNRTPPPPGQSRKWEDWELPCYITSFLTIVILGVGLNAKPDLTIETWAHQKA

Query:  LERLEMENLALSDSGSSESD
        LERLEMENLA+S SGSSESD
Subjt:  LERLEMENLALSDSGSSESD

XP_038881129.1 uncharacterized protein LOC120072731 [Benincasa hispida]

1.2e-58

93.33

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Query:  MPSPTPFTAASNMLRHRLLPSLRTRGGAAAGPSRWTSPGHEERPKGYLFNRTPPPPGQSRKWEDWELPCYITSFLTIVILGVGLNAKPDLTIETWAHQKA
        MPSPTPFT ASNMLRHRLLPSLRTRGGAAAG SRWTSPGHE+RPKGYLFNRTPPPPGQSRKWEDWELPCY+TSFLTIVILGVGLNAKPDLTIETWAHQKA
Subjt:  MPSPTPFTAASNMLRHRLLPSLRTRGGAAAGPSRWTSPGHEERPKGYLFNRTPPPPGQSRKWEDWELPCYITSFLTIVILGVGLNAKPDLTIETWAHQKA

Query:  LERLEMENLALSDSGSSESD
        LERLEME L +S SGSSESD
Subjt:  LERLEMENLALSDSGSSESD

TrEMBL top hits

e value

%identity

Alignment

A0A067KZT1 Uncharacterized protein

2.8e-53

88.98

Show/hide

Query:  MPSPTPFTAASNMLRHRLLPSLRTRGGAAAGPSRWTSPGHEERPKGYLFNRTPPPPGQSRKWEDWELPCYITSFLTIVILGVGLNAKPDLTIETWAHQKA
        MPSP PFT AS MLR RL  SLRTRGG AAG SRWTSPGHEERPKGYLFNRTPPP GQSRKWEDWELPCYITSFLTIVILGVGLNAKPDLTIETWAHQKA
Subjt:  MPSPTPFTAASNMLRHRLLPSLRTRGGAAAGPSRWTSPGHEERPKGYLFNRTPPPPGQSRKWEDWELPCYITSFLTIVILGVGLNAKPDLTIETWAHQKA

Query:  LERLEMENLALSDSGSSE
        LERLEME L LS SG SE
Subjt:  LERLEMENLALSDSGSSE

A0A6J1DCT8 uncharacterized protein LOC111019565

4.4e-59

93.33

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Query:  MPSPTPFTAASNMLRHRLLPSLRTRGGAAAGPSRWTSPGHEERPKGYLFNRTPPPPGQSRKWEDWELPCYITSFLTIVILGVGLNAKPDLTIETWAHQKA
        MPSP PFT ASNMLRHRLLP+LRTRGGAAAG SRWTSPGHEERPKGYLFNRTPPPPGQSRKWEDWELPCYITSFLTIVILGVGLNAKPDLTIETWAHQKA
Subjt:  MPSPTPFTAASNMLRHRLLPSLRTRGGAAAGPSRWTSPGHEERPKGYLFNRTPPPPGQSRKWEDWELPCYITSFLTIVILGVGLNAKPDLTIETWAHQKA

Query:  LERLEMENLALSDSGSSESD
        LERLEMEN+ +S SGSSESD
Subjt:  LERLEMENLALSDSGSSESD

A0A6J1EGU8 uncharacterized protein LOC111432424

2.0e-59

93.33

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Query:  MPSPTPFTAASNMLRHRLLPSLRTRGGAAAGPSRWTSPGHEERPKGYLFNRTPPPPGQSRKWEDWELPCYITSFLTIVILGVGLNAKPDLTIETWAHQKA
        MPSPTPF  ASNMLRHRLLPSLRTRGGAA G SRWTSPGHEE+PKGYLFNRTPPPPGQSRKWEDWELPCY+TSFLTIVILGVGLNAKPDLTIETWAHQKA
Subjt:  MPSPTPFTAASNMLRHRLLPSLRTRGGAAAGPSRWTSPGHEERPKGYLFNRTPPPPGQSRKWEDWELPCYITSFLTIVILGVGLNAKPDLTIETWAHQKA

Query:  LERLEMENLALSDSGSSESD
        LERLEMENLA+S SGSSESD
Subjt:  LERLEMENLALSDSGSSESD

A0A6J1HPH2 uncharacterized protein LOC111466129

2.6e-59

93.33

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Query:  MPSPTPFTAASNMLRHRLLPSLRTRGGAAAGPSRWTSPGHEERPKGYLFNRTPPPPGQSRKWEDWELPCYITSFLTIVILGVGLNAKPDLTIETWAHQKA
        MPSPTPF  ASNMLRHRLLPSLRTRGGAA G SRWTSPGHEE+PKGYLFNRTPPPPGQSRKWEDWELPCY+TSFLTIVILGVGLNAKPDLTIETWAHQKA
Subjt:  MPSPTPFTAASNMLRHRLLPSLRTRGGAAAGPSRWTSPGHEERPKGYLFNRTPPPPGQSRKWEDWELPCYITSFLTIVILGVGLNAKPDLTIETWAHQKA

Query:  LERLEMENLALSDSGSSESD
        LERLEMENLA+S SGSSESD
Subjt:  LERLEMENLALSDSGSSESD

I3NMS3 Uncharacterized protein

9.6e-54

88.98

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Query:  MPSPTPFTAASNMLRHRLLPSLRTRGGAAAGPSRWTSPGHEERPKGYLFNRTPPPPGQSRKWEDWELPCYITSFLTIVILGVGLNAKPDLTIETWAHQKA
        MPS  PFT AS+MLR RL  SLRTRGGAAAGPSRWTSPGHEERPKGYLFNRTPPPPGQSRKWEDWELPCYITSFLTIVILGVGLNAKPDL+IETWAHQKA
Subjt:  MPSPTPFTAASNMLRHRLLPSLRTRGGAAAGPSRWTSPGHEERPKGYLFNRTPPPPGQSRKWEDWELPCYITSFLTIVILGVGLNAKPDLTIETWAHQKA

Query:  LERLEMENLALSDSGSSE
        LERLEME L  S SG SE
Subjt:  LERLEMENLALSDSGSSE

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT2G42310.1 unknown protein

3.0e-44

72.41

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Query:  MPSPTPFTAASNMLRHRLLPSLRTRGGAAAGPSRWTSPGHEERPKGYLFNRTPPPPGQSRKWEDWELPCYITSFLTIVILGVGLNAKPDLTIETWAHQKA
        MPS    T A+  LR+R+       G  +AGPSRW +PGHEERPKGY  NRTPP PGQSRKWEDWELPCYITSFLTIVILGVGLNAKPDL+IETWAHQKA
Subjt:  MPSPTPFTAASNMLRHRLLPSLRTRGGAAAGPSRWTSPGHEERPKGYLFNRTPPPPGQSRKWEDWELPCYITSFLTIVILGVGLNAKPDLTIETWAHQKA

Query:  LERLEMENLALSDSGS
        LERLEME LA +   S
Subjt:  LERLEMENLALSDSGS

AT3G57785.1 unknown protein

1.5e-43

72.41

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Query:  MPSPTPFTAASNMLRHRLLPSLRTRGGAAAGPSRWTSPGHEERPKGYLFNRTPPPPGQSRKWEDWELPCYITSFLTIVILGVGLNAKPDLTIETWAHQKA
        M S  P   A+  LR+R+    R+ G  + GPSRW +PGHEERPKGY  NRTPPPPGQSRKWEDWELPCYITSFLTIVILGVGLNAKPDL+IETWAHQKA
Subjt:  MPSPTPFTAASNMLRHRLLPSLRTRGGAAAGPSRWTSPGHEERPKGYLFNRTPPPPGQSRKWEDWELPCYITSFLTIVILGVGLNAKPDLTIETWAHQKA

Query:  LERLEMENLALSDSGS
        LERLEME LA +   S
Subjt:  LERLEMENLALSDSGS

Sequences

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CDS sequence

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ATGCCGTCGCCAACGCCGTTCACCGCCGCCTCCAATATGCTCCGCCACCGCCTCCTCCCTTCTCTCCGGACTCGCGGCGGCGCCGCCGCAGGCCCGAGCCGGTGGACCAG
TCCCGGCCACGAGGAGCGTCCCAAGGGCTACCTCTTCAATCGCACGCCGCCTCCACCAGGTCAGTCCCGTAAATGGGAGGATTGGGAGCTTCCTTGTTATATCACCAGCT
TTCTCACCATCGTCATCCTCGGCGTTGGCCTCAACGCCAAGCCCGATCTCACCATCGAGACTTGGGCTCACCAGAAAGCCCTAGAGCGCCTCGAGATGGAGAATCTGGCT
TTGTCCGACTCCGGATCATCGGAATCCGATTGA

mRNA sequence

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Protein sequence

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MPSPTPFTAASNMLRHRLLPSLRTRGGAAAGPSRWTSPGHEERPKGYLFNRTPPPPGQSRKWEDWELPCYITSFLTIVILGVGLNAKPDLTIETWAHQKALERLEMENLA
LSDSGSSESD

Sed0027459 (gene) of Chayote v1 genome