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Sed0027472 (gene) of Chayote v1 genome

Gene IDSed0027472
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG13:1541662..1542456
RNA-Seq ExpressionSed0027472
SyntenySed0027472
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6576804.1 hypothetical protein SDJN03_24378, partial [Cucurbita argyrosperma subsp. sororia]1.9e-0746.99Show/hide
Query:  MASTTTLGSW-KVVFFAFLLLAFHVCARDLVRTDTVARSSCEGKIIKMNGMKGRRLIVRELDGAWRGNYANPPP--PPIAPVS
        MAS T L +W KV F  FLL+A  V AR+L   + V R++ E   +    + G RLI R+LD AWRG+Y+ PPP  PP  P S
Subjt:  MASTTTLGSW-KVVFFAFLLLAFHVCARDLVRTDTVARSSCEGKIIKMNGMKGRRLIVRELDGAWRGNYANPPP--PPIAPVS

KAG6600178.1 hypothetical protein SDJN03_05411, partial [Cucurbita argyrosperma subsp. sororia]1.7e-0853.09Show/hide
Query:  MASTTTLGSWK-VVFFAFLLLAFHVCARDLVRTDTVARSSCEGKIIKMNGMKGRRLIVRELDGAWRGNYANPPP--PPIAP
        MAS +    WK VVFFA LLLAF+V AR+LV T+ VAR+  E   + +    GRRLI R+LD +W GNY+ PPP  PP  P
Subjt:  MASTTTLGSWK-VVFFAFLLLAFHVCARDLVRTDTVARSSCEGKIIKMNGMKGRRLIVRELDGAWRGNYANPPP--PPIAP

KAG7014831.1 hypothetical protein SDJN02_22460, partial [Cucurbita argyrosperma subsp. argyrosperma]1.9e-0746.99Show/hide
Query:  MASTTTLGSW-KVVFFAFLLLAFHVCARDLVRTDTVARSSCEGKIIKMNGMKGRRLIVRELDGAWRGNYANPPP--PPIAPVS
        MAS T L +W KV F  FLL+A  V AR+L   + V R++ E   +    + G RLI R+LD AWRG+Y+ PPP  PP  P S
Subjt:  MASTTTLGSW-KVVFFAFLLLAFHVCARDLVRTDTVARSSCEGKIIKMNGMKGRRLIVRELDGAWRGNYANPPP--PPIAPVS

KAG7030841.1 hypothetical protein SDJN02_04878 [Cucurbita argyrosperma subsp. argyrosperma]2.2e-0852.44Show/hide
Query:  MASTTTLGSWK-VVFFAFLLLAFHVCARDLVRTDTVARSSCEGKIIKMNGMKGRRLIVRELDGAWRGNYANPPP---PPIAP
        MAS +    WK VVFFA LLLAF+V AR+LV T+ VAR+  E   + +    GRRLI R+LD +W GNY+ PPP   PP  P
Subjt:  MASTTTLGSWK-VVFFAFLLLAFHVCARDLVRTDTVARSSCEGKIIKMNGMKGRRLIVRELDGAWRGNYANPPP---PPIAP

KGN57260.1 hypothetical protein Csa_011296 [Cucumis sativus]2.5e-0747.44Show/hide
Query:  STTTLGS--WK--VVFFAFLLLAFHVCARDLVRTDTVARSSCEGKI-IKMNGMKGRRLIVRELDGAWRGNYANPPPPP
        +T T+ S  WK  ++FF  LLLA+++ AR+L     VAR++CE  +  +MN +  RRL VR+LD +WRGNY  PP PP
Subjt:  STTTLGS--WK--VVFFAFLLLAFHVCARDLVRTDTVARSSCEGKI-IKMNGMKGRRLIVRELDGAWRGNYANPPPPP

TrEMBL top hitse value%identityAlignment
A0A0A0L5K7 Uncharacterized protein1.2e-0747.44Show/hide
Query:  STTTLGS--WK--VVFFAFLLLAFHVCARDLVRTDTVARSSCEGKI-IKMNGMKGRRLIVRELDGAWRGNYANPPPPP
        +T T+ S  WK  ++FF  LLLA+++ AR+L     VAR++CE  +  +MN +  RRL VR+LD +WRGNY  PP PP
Subjt:  STTTLGS--WK--VVFFAFLLLAFHVCARDLVRTDTVARSSCEGKI-IKMNGMKGRRLIVRELDGAWRGNYANPPPPP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCACCACAACTTTAGGTTCTTGGAAGGTTGTCTTCTTTGCTTTCCTTCTTCTTGCTTTCCATGTTTGTGCGAGGGACCTCGTTCGGACCGACACAGTGGCTCG
ATCATCTTGTGAGGGGAAGATAATTAAGATGAATGGAATGAAGGGCAGGAGATTAATTGTTAGAGAGTTAGATGGGGCTTGGAGGGGAAACTATGCAAACCCTCCTCCTC
CTCCAATTGCTCCAGTTTCTATTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCCACCACAACTTTAGGTTCTTGGAAGGTTGTCTTCTTTGCTTTCCTTCTTCTTGCTTTCCATGTTTGTGCGAGGGACCTCGTTCGGACCGACACAGTGGCTCG
ATCATCTTGTGAGGGGAAGATAATTAAGATGAATGGAATGAAGGGCAGGAGATTAATTGTTAGAGAGTTAGATGGGGCTTGGAGGGGAAACTATGCAAACCCTCCTCCTC
CTCCAATTGCTCCAGTTTCTATTTAA
Protein sequenceShow/hide protein sequence
MASTTTLGSWKVVFFAFLLLAFHVCARDLVRTDTVARSSCEGKIIKMNGMKGRRLIVRELDGAWRGNYANPPPPPIAPVSI