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Sed0027498 (gene) of Chayote v1 genome

Gene IDSed0027498
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG07:38379001..38379351
RNA-Seq ExpressionSed0027498
SyntenySed0027498
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8648853.1 hypothetical protein Csa_008932 [Cucumis sativus]1.7e-0950.91Show/hide
Query:  MALRHGRFFSVFFFFVLVLSSRNTIMATSRAMLAKVPTPT-------PVTIFYEEST------PSTSISMPPSSNDFVVFKVSSGID-AKPPMSNSIIQS
        MALRH      FF  VL L+S +T MATSRAML   PTPT       P T+   E+T       S S SMPPS  DFV F+V S +  A PPM + +I+S
Subjt:  MALRHGRFFSVFFFFVLVLSSRNTIMATSRAMLAKVPTPT-------PVTIFYEEST------PSTSISMPPSSNDFVVFKVSSGID-AKPPMSNSIIQS

Query:  CKPKGRMRYS
        CKPKGRMR S
Subjt:  CKPKGRMRYS

KAE8649709.1 hypothetical protein Csa_012565, partial [Cucumis sativus]5.6e-0537.93Show/hide
Query:  MALRHGRFFSVFFFFVLVLSSRNTIMATSRAMLAKVPTPTPVTIFYEEST-------------PSTSISMPPSSNDFVVFKVSSGIDAKPPMSNSIIQSC
        MA +H   F   FFF++ +SS + IMAT+R ML     PT +    EEST              S+SIS+PP+S++F+ F   +G+ A+ P+  S++  C
Subjt:  MALRHGRFFSVFFFFVLVLSSRNTIMATSRAMLAKVPTPTPVTIFYEEST-------------PSTSISMPPSSNDFVVFKVSSGIDAKPPMSNSIIQSC

Query:  KPKGRMRYSAPSDRRN
        KPKG + +SAP+ + N
Subjt:  KPKGRMRYSAPSDRRN

KAG6573847.1 hypothetical protein SDJN03_27734, partial [Cucurbita argyrosperma subsp. sororia]1.1e-1963.44Show/hide
Query:  VPTP-TPVTIFYEESTPST-----------SISMPPSSNDFVVFKVSSGIDAKPPMSNSIIQSCKPKGRMRYSAPSDRRNSEPLVDVECSNMS
        +PTP T  T F  ESTPST           +I M P+SNDFV F+V +G+DAKPPMSN +I+SCKPKGRMRYSAPSDRRNS PLV + CSNMS
Subjt:  VPTP-TPVTIFYEESTPST-----------SISMPPSSNDFVVFKVSSGIDAKPPMSNSIIQSCKPKGRMRYSAPSDRRNSEPLVDVECSNMS

KAG6595583.1 hypothetical protein SDJN03_12136, partial [Cucurbita argyrosperma subsp. sororia]8.1e-1242.99Show/hide
Query:  MALRHGRFFSVFFFFVLVLSSRNTIMATSRAMLAKVPTPTPVTIFYEESTPSTSISMPPSSNDFVVFKVSSGIDAKPPMSNSIIQSCKPKGRMRYSAPSD
        M  R G F ++ FF ++V+SS +TI+ATSR MLA         +  +ES P   +  PP+SNDF    + +G  A PPM  S ++SCKPKG +R+S+PS 
Subjt:  MALRHGRFFSVFFFFVLVLSSRNTIMATSRAMLAKVPTPTPVTIFYEESTPSTSISMPPSSNDFVVFKVSSGIDAKPPMSNSIIQSCKPKGRMRYSAPSD

Query:  RRNSEPL
         RN+ P+
Subjt:  RRNSEPL

TYK09256.1 hypothetical protein E5676_scaffold475G002500 [Cucumis melo var. makuwa]1.1e-1953.6Show/hide
Query:  FFFFVLVLSSRNTIMATSRAMLAKVPTPT-----PVTIFYEE---STP------------STSISMPPSSNDFVVFKVSSGIDAKPPMSNSIIQSCKPKG
        F F VL L+S +T MATSRAML   PTPT     P  I   +   S+P            S+S SMPPS  DFV F+V S + A PP  + +I+SCKPKG
Subjt:  FFFFVLVLSSRNTIMATSRAMLAKVPTPT-----PVTIFYEE---STP------------STSISMPPSSNDFVVFKVSSGIDAKPPMSNSIIQSCKPKG

Query:  RMRYSAPSDRRNSEPLVDVECSNMS
        RMRYSAPSDRRNSEPL+ + CSNMS
Subjt:  RMRYSAPSDRRNSEPLVDVECSNMS

TrEMBL top hitse value%identityAlignment
A0A0A0KRI3 Uncharacterized protein5.3e-1759.05Show/hide
Query:  MATSRAMLAKVPTPT-------PVTIFYEEST------PSTSISMPPSSNDFVVFKVSSGID-AKPPMSNSIIQSCKPKGRMRYSAPSDRRNSEPLVDVE
        MATSRAML   PTPT       P T+   E+T       S S SMPPS  DFV F+V S +  A PPM + +I+SCKPKGRMRYSAPSDRRNSEPLV + 
Subjt:  MATSRAMLAKVPTPT-------PVTIFYEEST------PSTSISMPPSSNDFVVFKVSSGID-AKPPMSNSIIQSCKPKGRMRYSAPSDRRNSEPLVDVE

Query:  CSNMS
        CSNMS
Subjt:  CSNMS

A0A5D3CFX3 Uncharacterized protein5.1e-2053.6Show/hide
Query:  FFFFVLVLSSRNTIMATSRAMLAKVPTPT-----PVTIFYEE---STP------------STSISMPPSSNDFVVFKVSSGIDAKPPMSNSIIQSCKPKG
        F F VL L+S +T MATSRAML   PTPT     P  I   +   S+P            S+S SMPPS  DFV F+V S + A PP  + +I+SCKPKG
Subjt:  FFFFVLVLSSRNTIMATSRAMLAKVPTPT-----PVTIFYEE---STP------------STSISMPPSSNDFVVFKVSSGIDAKPPMSNSIIQSCKPKG

Query:  RMRYSAPSDRRNSEPLVDVECSNMS
        RMRYSAPSDRRNSEPL+ + CSNMS
Subjt:  RMRYSAPSDRRNSEPLVDVECSNMS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCTACGACATGGCCGTTTCTTCTCCGTTTTCTTCTTCTTTGTCCTTGTTCTTTCTTCTCGTAACACGATCATGGCAACGTCGAGAGCCATGCTCGCTAAGGTTCC
AACGCCAACTCCGGTAACCATATTTTATGAGGAATCTACTCCTTCAACATCCATCTCCATGCCCCCAAGTTCTAATGACTTTGTTGTCTTCAAAGTTTCGAGTGGAATTG
ATGCAAAGCCACCAATGTCCAATTCGATCATTCAAAGTTGCAAGCCGAAAGGTCGAATGAGATATTCTGCGCCAAGCGATCGTAGGAACAGCGAGCCTCTTGTCGATGTT
GAATGCTCAAACATGTCATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTCTACGACATGGCCGTTTCTTCTCCGTTTTCTTCTTCTTTGTCCTTGTTCTTTCTTCTCGTAACACGATCATGGCAACGTCGAGAGCCATGCTCGCTAAGGTTCC
AACGCCAACTCCGGTAACCATATTTTATGAGGAATCTACTCCTTCAACATCCATCTCCATGCCCCCAAGTTCTAATGACTTTGTTGTCTTCAAAGTTTCGAGTGGAATTG
ATGCAAAGCCACCAATGTCCAATTCGATCATTCAAAGTTGCAAGCCGAAAGGTCGAATGAGATATTCTGCGCCAAGCGATCGTAGGAACAGCGAGCCTCTTGTCGATGTT
GAATGCTCAAACATGTCATGA
Protein sequenceShow/hide protein sequence
MALRHGRFFSVFFFFVLVLSSRNTIMATSRAMLAKVPTPTPVTIFYEESTPSTSISMPPSSNDFVVFKVSSGIDAKPPMSNSIIQSCKPKGRMRYSAPSDRRNSEPLVDV
ECSNMS