; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0027523 (gene) of Chayote v1 genome

Gene IDSed0027523
OrganismSechium edule (Chayote v1)
Descriptionethylene-responsive transcription factor RAP2-1
Genome locationLG11:23467725..23468718
RNA-Seq ExpressionSed0027523
SyntenySed0027523
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsIPR001471 - AP2/ERF domain
IPR016177 - DNA-binding domain superfamily
IPR036955 - AP2/ERF domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7029328.1 Ethylene-responsive transcription factor RAP2-1, partial [Cucurbita argyrosperma subsp. argyrosperma]7.9e-4882.93Show/hide
Query:  EKKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPVAAARAYDTAVFYLRGPSARLNFPDLI---VDHRLLDLSPSSIRQRAIEVGARVDAAA-----
        ++KPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTP+AAARAYDTAVFYLRGPSARLNFPDLI   +DH+LLD+SPSSIR+RAIEVGARVDAAA     
Subjt:  EKKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPVAAARAYDTAVFYLRGPSARLNFPDLI---VDHRLLDLSPSSIRQRAIEVGARVDAAA-----

Query:  RHSKPTSHKPDLNRFPDPDSSDE
        R SKP S KPDLN+FP+P+SSDE
Subjt:  RHSKPTSHKPDLNRFPDPDSSDE

XP_008444599.1 PREDICTED: ethylene-responsive transcription factor RAP2-1 [Cucumis melo]7.9e-4880.77Show/hide
Query:  ERRQA--EKKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPVAAARAYDTAVFYLRGPSARLNFPDLI---VDHRLLDLSPSSIRQRAIEVGARVDA
        +R+Q+  ++KPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTP+AAARAYDTAVFYLRGPSARLNFPDLI   +DH+LLD+SPSSIR+RAIEVGARVDA
Subjt:  ERRQA--EKKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPVAAARAYDTAVFYLRGPSARLNFPDLI---VDHRLLDLSPSSIRQRAIEVGARVDA

Query:  AA-----RHSKPTSHKPDLNRFPDPDSSDE
        AA     R SKP S KPDLN+FPDP+SSDE
Subjt:  AA-----RHSKPTSHKPDLNRFPDPDSSDE

XP_022962377.1 ethylene-responsive transcription factor RAP2-1-like [Cucurbita moschata]7.9e-4882.93Show/hide
Query:  EKKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPVAAARAYDTAVFYLRGPSARLNFPDLI---VDHRLLDLSPSSIRQRAIEVGARVDAAA-----
        ++KPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTP+AAARAYDTAVFYLRGPSARLNFPDLI   +DH+LLD+SPSSIR+RAIEVGARVDAAA     
Subjt:  EKKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPVAAARAYDTAVFYLRGPSARLNFPDLI---VDHRLLDLSPSSIRQRAIEVGARVDAAA-----

Query:  RHSKPTSHKPDLNRFPDPDSSDE
        R SKP S KPDLN+FP+P+SSDE
Subjt:  RHSKPTSHKPDLNRFPDPDSSDE

XP_022997304.1 ethylene-responsive transcription factor RAP2-1-like [Cucurbita maxima]7.9e-4882.93Show/hide
Query:  EKKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPVAAARAYDTAVFYLRGPSARLNFPDLI---VDHRLLDLSPSSIRQRAIEVGARVDAAA-----
        ++KPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTP+AAARAYDTAVFYLRGPSARLNFPDLI   +DH+LLD+SPSSIR+RAIEVGARVDAAA     
Subjt:  EKKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPVAAARAYDTAVFYLRGPSARLNFPDLI---VDHRLLDLSPSSIRQRAIEVGARVDAAA-----

Query:  RHSKPTSHKPDLNRFPDPDSSDE
        R SKP S KPDLN+FP+P+SSDE
Subjt:  RHSKPTSHKPDLNRFPDPDSSDE

XP_038884237.1 ethylene-responsive transcription factor RAP2-1-like [Benincasa hispida]3.5e-4883.74Show/hide
Query:  EKKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPVAAARAYDTAVFYLRGPSARLNFPDLI---VDHRLLDLSPSSIRQRAIEVGARVDAAA-----
        ++KPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTP+AAARAYDTAVFYLRGPSARLNFPDLI   +DH+LLD+SPSSIR+RAIEVGARVDAAA     
Subjt:  EKKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPVAAARAYDTAVFYLRGPSARLNFPDLI---VDHRLLDLSPSSIRQRAIEVGARVDAAA-----

Query:  RHSKPTSHKPDLNRFPDPDSSDE
        R SKP S KPDLN+FPDP+SSDE
Subjt:  RHSKPTSHKPDLNRFPDPDSSDE

TrEMBL top hitse value%identityAlignment
A0A0A0LR87 AP2/ERF domain-containing protein2.5e-4780Show/hide
Query:  ERRQA--EKKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPVAAARAYDTAVFYLRGPSARLNFPDLI---VDHRLLDLSPSSIRQRAIEVGARVDA
        +R+Q+  ++KPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTP+AAARAYDTAVFYLRGPSARLNFPDLI   +DH+LLD+SPSSIR+RAIEVGARVDA
Subjt:  ERRQA--EKKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPVAAARAYDTAVFYLRGPSARLNFPDLI---VDHRLLDLSPSSIRQRAIEVGARVDA

Query:  AA-----RHSKPTSHKPDLNRFPDPDSSDE
        AA     R SKP S KPDLN+FPDP+SS E
Subjt:  AA-----RHSKPTSHKPDLNRFPDPDSSDE

A0A1S3BAR1 ethylene-responsive transcription factor RAP2-13.8e-4880.77Show/hide
Query:  ERRQA--EKKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPVAAARAYDTAVFYLRGPSARLNFPDLI---VDHRLLDLSPSSIRQRAIEVGARVDA
        +R+Q+  ++KPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTP+AAARAYDTAVFYLRGPSARLNFPDLI   +DH+LLD+SPSSIR+RAIEVGARVDA
Subjt:  ERRQA--EKKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPVAAARAYDTAVFYLRGPSARLNFPDLI---VDHRLLDLSPSSIRQRAIEVGARVDA

Query:  AA-----RHSKPTSHKPDLNRFPDPDSSDE
        AA     R SKP S KPDLN+FPDP+SSDE
Subjt:  AA-----RHSKPTSHKPDLNRFPDPDSSDE

A0A5A7V5C8 Ethylene-responsive transcription factor RAP2-13.8e-4880.77Show/hide
Query:  ERRQA--EKKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPVAAARAYDTAVFYLRGPSARLNFPDLI---VDHRLLDLSPSSIRQRAIEVGARVDA
        +R+Q+  ++KPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTP+AAARAYDTAVFYLRGPSARLNFPDLI   +DH+LLD+SPSSIR+RAIEVGARVDA
Subjt:  ERRQA--EKKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPVAAARAYDTAVFYLRGPSARLNFPDLI---VDHRLLDLSPSSIRQRAIEVGARVDA

Query:  AA-----RHSKPTSHKPDLNRFPDPDSSDE
        AA     R SKP S KPDLN+FPDP+SSDE
Subjt:  AA-----RHSKPTSHKPDLNRFPDPDSSDE

A0A6J1HCJ9 ethylene-responsive transcription factor RAP2-1-like3.8e-4882.93Show/hide
Query:  EKKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPVAAARAYDTAVFYLRGPSARLNFPDLI---VDHRLLDLSPSSIRQRAIEVGARVDAAA-----
        ++KPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTP+AAARAYDTAVFYLRGPSARLNFPDLI   +DH+LLD+SPSSIR+RAIEVGARVDAAA     
Subjt:  EKKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPVAAARAYDTAVFYLRGPSARLNFPDLI---VDHRLLDLSPSSIRQRAIEVGARVDAAA-----

Query:  RHSKPTSHKPDLNRFPDPDSSDE
        R SKP S KPDLN+FP+P+SSDE
Subjt:  RHSKPTSHKPDLNRFPDPDSSDE

A0A6J1KB24 ethylene-responsive transcription factor RAP2-1-like3.8e-4882.93Show/hide
Query:  EKKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPVAAARAYDTAVFYLRGPSARLNFPDLI---VDHRLLDLSPSSIRQRAIEVGARVDAAA-----
        ++KPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTP+AAARAYDTAVFYLRGPSARLNFPDLI   +DH+LLD+SPSSIR+RAIEVGARVDAAA     
Subjt:  EKKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPVAAARAYDTAVFYLRGPSARLNFPDLI---VDHRLLDLSPSSIRQRAIEVGARVDAAA-----

Query:  RHSKPTSHKPDLNRFPDPDSSDE
        R SKP S KPDLN+FP+P+SSDE
Subjt:  RHSKPTSHKPDLNRFPDPDSSDE

SwissProt top hitse value%identityAlignment
O22174 Ethylene-responsive transcription factor ERF0082.0e-3354.79Show/hide
Query:  RQAEKKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPVAAARAYDTAVFYLRGPSARLNFPDLIV-------DHRLLDLSPSSIRQRAIEVGARVDA
        R+ + KPY+GIRMRKWGKWVAEIREPNKRSRIWLGSY TP AAARAYDTAVFYLRGPSARLNFP+L+          R  DLS + IR++A EVGA+VDA
Subjt:  RQAEKKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPVAAARAYDTAVFYLRGPSARLNFPDLIV-------DHRLLDLSPSSIRQRAIEVGARVDA

Query:  ----------------------AARHSKPTSHKPDLNRFPDPDSSD
                                +    +  + DLN+ PDP++SD
Subjt:  ----------------------AARHSKPTSHKPDLNRFPDPDSSD

Q8LC30 Ethylene-responsive transcription factor RAP2-13.2e-3659.59Show/hide
Query:  EQEEAGESERRQ----------AEKKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPVAAARAYDTAVFYLRGPSARLNFPDLIV---DH----RLL
        EQEE+   +RRQ          A +KPYRGIR RKWGKWVAEIREPNKRSR+WLGSYTT +AAARAYD AVFYLRGPSARLNFPDL++   DH       
Subjt:  EQEEAGESERRQ----------AEKKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPVAAARAYDTAVFYLRGPSARLNFPDLIV---DH----RLL

Query:  DLSPSSIRQRAIEVGARVDA-------AARHSKPTSHKPDLNRFPD
        D+  + IR++A EVGARVDA       +  HS P   KPDLN+ P+
Subjt:  DLSPSSIRQRAIEVGARVDA-------AARHSKPTSHKPDLNRFPD

Q8W3M3 Ethylene-responsive transcription factor RAP2-91.3e-3262.93Show/hide
Query:  AEKKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPVAAARAYDTAVFYLRGPSARLNFPDLIV------DHRLLDLSPSSIRQRAIEVGARVDAAAR
        + +K Y+GIRMRKWGKWVAEIREPNKRSRIWLGSY T VAAARAYDTAVFYLRGPSARLNFP+ +       +    D+SP+ IR++A EVGARVDA  R
Subjt:  AEKKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPVAAARAYDTAVFYLRGPSARLNFPDLIV------DHRLLDLSPSSIRQRAIEVGARVDAAAR

Query:  HSKPTSHKPDLNRFPD
                 D+N+ P+
Subjt:  HSKPTSHKPDLNRFPD

Q9FH94 Ethylene-responsive transcription factor ERF0103.7e-3261.74Show/hide
Query:  KPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPVAAARAYDTAVFYLRGPSARLNFPDLIVDHRLL--DLSPSSIRQRAIEVGARVDAAARHSKPTSH
        +PY+GIRMRKWGKWVAEIREPNKRSR+WLGSY+TP AAARAYDTAVFYLRGP+ARLNFP+L+   +    D+S ++IR++A EVGA+VDA     +   H
Subjt:  KPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPVAAARAYDTAVFYLRGPSARLNFPDLIVDHRLL--DLSPSSIRQRAIEVGARVDAAARHSKPTSH

Query:  KP-DLNRFPDPDSSD
        +    NR  D D+ +
Subjt:  KP-DLNRFPDPDSSD

Q9SNE1 Ethylene-responsive transcription factor ERF0112.8e-3254.07Show/hide
Query:  RQAEKKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPVAAARAYDTAVFYLRGPSARLNFPDLIVDHRLLDLSPSSIRQRAIEVGARVDAAA-----
        +   ++P++GIRMRKWGKWVAEIREPNKRSR+WLGSY+TP AAARAYDTAVFYLRGP+A LNFP+L+      D+S ++IR++A EVGA+VDA       
Subjt:  RQAEKKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPVAAARAYDTAVFYLRGPSARLNFPDLIVDHRLLDLSPSSIRQRAIEVGARVDAAA-----

Query:  --RHSKPTSHK----------PDLNRFPDPDSSDE
          +  +  S K           DLN+ PDP++ D+
Subjt:  --RHSKPTSHK----------PDLNRFPDPDSSDE

Arabidopsis top hitse value%identityAlignment
AT1G46768.1 related to AP2 12.3e-3759.59Show/hide
Query:  EQEEAGESERRQ----------AEKKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPVAAARAYDTAVFYLRGPSARLNFPDLIV---DH----RLL
        EQEE+   +RRQ          A +KPYRGIR RKWGKWVAEIREPNKRSR+WLGSYTT +AAARAYD AVFYLRGPSARLNFPDL++   DH       
Subjt:  EQEEAGESERRQ----------AEKKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPVAAARAYDTAVFYLRGPSARLNFPDLIV---DH----RLL

Query:  DLSPSSIRQRAIEVGARVDA-------AARHSKPTSHKPDLNRFPD
        D+  + IR++A EVGARVDA       +  HS P   KPDLN+ P+
Subjt:  DLSPSSIRQRAIEVGARVDA-------AARHSKPTSHKPDLNRFPD

AT2G23340.1 DREB and EAR motif protein 31.4e-3454.79Show/hide
Query:  RQAEKKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPVAAARAYDTAVFYLRGPSARLNFPDLIV-------DHRLLDLSPSSIRQRAIEVGARVDA
        R+ + KPY+GIRMRKWGKWVAEIREPNKRSRIWLGSY TP AAARAYDTAVFYLRGPSARLNFP+L+          R  DLS + IR++A EVGA+VDA
Subjt:  RQAEKKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPVAAARAYDTAVFYLRGPSARLNFPDLIV-------DHRLLDLSPSSIRQRAIEVGARVDA

Query:  ----------------------AARHSKPTSHKPDLNRFPDPDSSD
                                +    +  + DLN+ PDP++SD
Subjt:  ----------------------AARHSKPTSHKPDLNRFPDPDSSD

AT3G50260.1 cooperatively regulated by ethylene and jasmonate 12.0e-3354.07Show/hide
Query:  RQAEKKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPVAAARAYDTAVFYLRGPSARLNFPDLIVDHRLLDLSPSSIRQRAIEVGARVDAAA-----
        +   ++P++GIRMRKWGKWVAEIREPNKRSR+WLGSY+TP AAARAYDTAVFYLRGP+A LNFP+L+      D+S ++IR++A EVGA+VDA       
Subjt:  RQAEKKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPVAAARAYDTAVFYLRGPSARLNFPDLIVDHRLLDLSPSSIRQRAIEVGARVDAAA-----

Query:  --RHSKPTSHK----------PDLNRFPDPDSSDE
          +  +  S K           DLN+ PDP++ D+
Subjt:  --RHSKPTSHK----------PDLNRFPDPDSSDE

AT4G06746.1 related to AP2 99.0e-3462.93Show/hide
Query:  AEKKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPVAAARAYDTAVFYLRGPSARLNFPDLIV------DHRLLDLSPSSIRQRAIEVGARVDAAAR
        + +K Y+GIRMRKWGKWVAEIREPNKRSRIWLGSY T VAAARAYDTAVFYLRGPSARLNFP+ +       +    D+SP+ IR++A EVGARVDA  R
Subjt:  AEKKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPVAAARAYDTAVFYLRGPSARLNFPDLIV------DHRLLDLSPSSIRQRAIEVGARVDAAAR

Query:  HSKPTSHKPDLNRFPD
                 D+N+ P+
Subjt:  HSKPTSHKPDLNRFPD

AT5G67190.1 DREB and EAR motif protein 22.6e-3361.74Show/hide
Query:  KPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPVAAARAYDTAVFYLRGPSARLNFPDLIVDHRLL--DLSPSSIRQRAIEVGARVDAAARHSKPTSH
        +PY+GIRMRKWGKWVAEIREPNKRSR+WLGSY+TP AAARAYDTAVFYLRGP+ARLNFP+L+   +    D+S ++IR++A EVGA+VDA     +   H
Subjt:  KPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPVAAARAYDTAVFYLRGPSARLNFPDLIVDHRLL--DLSPSSIRQRAIEVGARVDAAARHSKPTSH

Query:  KP-DLNRFPDPDSSD
        +    NR  D D+ +
Subjt:  KP-DLNRFPDPDSSD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAACAAGAAGAAGCCGGCGAATCCGAGAGGCGGCAGGCGGAGAAGAAGCCTTACAGAGGAATAAGGATGAGGAAGTGGGGAAAGTGGGTGGCCGAAATCCGAGAGCC
AAACAAGCGCTCTAGGATTTGGCTGGGCTCCTACACCACCCCGGTCGCGGCCGCCAGAGCCTACGACACCGCCGTCTTTTACCTCAGAGGCCCATCCGCCCGCCTCAACT
TCCCCGACCTCATCGTCGACCACCGCCTCCTCGATCTCTCCCCTTCCTCCATTCGCCAACGCGCCATCGAGGTCGGCGCCCGAGTCGACGCTGCCGCCCGCCACTCCAAA
CCTACTTCGCATAAGCCCGACTTGAACCGCTTTCCCGACCCGGATAGCTCGGATGAAGGTTGA
mRNA sequenceShow/hide mRNA sequence
GCCGTGTCAATATAAAATAATTGTAAGATAAAATTTGATATTTATGTCGTATATAGTTTATGTTGGGAATTAAGGTTATGGTGCATATAAAACTAATCATGCAATTTGGG
GTCTTCCCTCCCTCTGTCTTGAAAATAAAAGGAATGAATTGTTAGAAAGAACGACAGAGAGGATTGAATTTGTCGGCCATCTTAGGAAGTGTGTTTCCCTCAAGTCCCCT
TAAAACCTCCACCCCCACCCCCACACACACAAAAACAAACACTCCATTTCATTTGTTTTGTGAGCATGGAACAAGAAGAAGCCGGCGAATCCGAGAGGCGGCAGGCGGAG
AAGAAGCCTTACAGAGGAATAAGGATGAGGAAGTGGGGAAAGTGGGTGGCCGAAATCCGAGAGCCAAACAAGCGCTCTAGGATTTGGCTGGGCTCCTACACCACCCCGGT
CGCGGCCGCCAGAGCCTACGACACCGCCGTCTTTTACCTCAGAGGCCCATCCGCCCGCCTCAACTTCCCCGACCTCATCGTCGACCACCGCCTCCTCGATCTCTCCCCTT
CCTCCATTCGCCAACGCGCCATCGAGGTCGGCGCCCGAGTCGACGCTGCCGCCCGCCACTCCAAACCTACTTCGCATAAGCCCGACTTGAACCGCTTTCCCGACCCGGAT
AGCTCGGATGAAGGTTGATCACCATCACTGTTTCATGTGCTTCATACACAAGATCTTGATGAAATAGAGAGAAAGGAACCATGTGGGCTTCGCTTATTCGTTTGTAACAC
GGGAGAGATATGGTGAAGTAAGCTTGTTTGTGAATCCCACTACTAATTTAACGTTTCTTCTCTGCATCACCATTATTTTCTTAACTTTTTATGATTGCTTTTGTGATTCA
TTTTTCTTTTATTCATGTCGAGGGACTTTTAGGTTTTGTCTCGGTGATATTATTGGCTGCTACGTAAATTTATTTTAGAACCAAAAATGGGTGTTTGTTTGATGAATTTA
AAAG
Protein sequenceShow/hide protein sequence
MEQEEAGESERRQAEKKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPVAAARAYDTAVFYLRGPSARLNFPDLIVDHRLLDLSPSSIRQRAIEVGARVDAAARHSK
PTSHKPDLNRFPDPDSSDEG