; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0027529 (gene) of Chayote v1 genome

Gene IDSed0027529
OrganismSechium edule (Chayote v1)
DescriptionPoly(A)-specific ribonuclease
Genome locationLG11:27771958..27773061
RNA-Seq ExpressionSed0027529
SyntenySed0027529
Gene Ontology termsGO:0043928 - exonucleolytic catabolism of deadenylated mRNA (biological process)
GO:0090503 - RNA phosphodiester bond hydrolysis, exonucleolytic (biological process)
GO:0000932 - P-body (cellular component)
GO:0005634 - nucleus (cellular component)
GO:0030015 - CCR4-NOT core complex (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004535 - poly(A)-specific ribonuclease activity (molecular function)
InterPro domainsIPR006941 - Ribonuclease CAF1
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR039637 - CCR4-NOT transcription complex subunit 7/8/Pop2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022142408.1 probable CCR4-associated factor 1 homolog 11 [Momordica charantia]1.4e-13182.73Show/hide
Query:  MVIEDLKNSNTKPIKIREVWAHNLESEFLFIRAVIDRFPCVSMDTEFPGIVFSDPARPH--QSRPSDHYRLLKSNVDALHLIQIGLTLSDSAGNLPDLGS
        MV++DLKN N+KPI+IREVWA NLESEF  IR +ID+FPCVSMDTEFPG+VF+DPA+P+  Q+RPSDHYRLLKSNVDAL+LIQIG+TLSDS GNLPDLG+
Subjt:  MVIEDLKNSNTKPIKIREVWAHNLESEFLFIRAVIDRFPCVSMDTEFPGIVFSDPARPH--QSRPSDHYRLLKSNVDALHLIQIGLTLSDSAGNLPDLGS

Query:  DDARFIWEFNFMDFDVARDFHSPDSIDLLRRQGIDFDRNRAEGADSRRFAELMMSSGLVCSDSVTWVTFHSAYDFGYLVKILTQRSLPDRLDEFLAVLRV
          +RFIWEFNFMDFDVARD H+PDSI+LLRRQGIDFDRNR EG DS RFAELMMSSGLVC+DSV+WVTFHSAYDFGYLVK+LT+RSLP RL+EFL VLRV
Subjt:  DDARFIWEFNFMDFDVARDFHSPDSIDLLRRQGIDFDRNRAEGADSRRFAELMMSSGLVCSDSVTWVTFHSAYDFGYLVKILTQRSLPDRLDEFLAVLRV

Query:  FFGDYVYDVKHMMRFCSSLYGGLDRIAKTLNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQQDVEKHAGILYGLEV
        FFGD VYDVK+MMRFC SLYGGLDRIAK LNV+RAVGKCHQAGSDSLLTWHAFQKMRDT+FVQ  +EKHAG+LYGLEV
Subjt:  FFGDYVYDVKHMMRFCSSLYGGLDRIAKTLNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQQDVEKHAGILYGLEV

XP_022945861.1 probable CCR4-associated factor 1 homolog 11 [Cucurbita moschata]5.6e-12880.71Show/hide
Query:  MVIEDLKNSNTKPIKIREVWAHNLESEFLFIRAVIDRFPCVSMDTEFPGIVFSDPARPHQS---RPSDHYRLLKSNVDALHLIQIGLTLSDSAGNLPDLG
        MV  DL N++ K IKIREVWA NLESEF  IR +ID FPCVSMDTEFPGIVF+ P  P  +     SDHY+LLKSNVDAL+LIQIG+TLSDS GNLPDLG
Subjt:  MVIEDLKNSNTKPIKIREVWAHNLESEFLFIRAVIDRFPCVSMDTEFPGIVFSDPARPHQS---RPSDHYRLLKSNVDALHLIQIGLTLSDSAGNLPDLG

Query:  SDDARFIWEFNFMDFDVARDFHSPDSIDLLRRQGIDFDRNRAEGADSRRFAELMMSSGLVCSDSVTWVTFHSAYDFGYLVKILTQRSLPDRLDEFLAVLR
        +DD+RFIWEFNFMDFD+ARD ++PDSIDLLRRQGIDFDRNR EG DS RFAELMMSSGLVC+DSV+WVTFHSAYDF YL+KILTQ+SLP+RLDEFL VLR
Subjt:  SDDARFIWEFNFMDFDVARDFHSPDSIDLLRRQGIDFDRNRAEGADSRRFAELMMSSGLVCSDSVTWVTFHSAYDFGYLVKILTQRSLPDRLDEFLAVLR

Query:  VFFGDYVYDVKHMMRFCSSLYGGLDRIAKTLNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQQDVEKHAGILYGLEVF
        V FGD VYDVK+MMRFC SLYGGLDRIAK+LNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQ +VEKHAG+LYGLE F
Subjt:  VFFGDYVYDVKHMMRFCSSLYGGLDRIAKTLNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQQDVEKHAGILYGLEVF

XP_022967098.1 probable CCR4-associated factor 1 homolog 11 [Cucurbita maxima]2.1e-12780.36Show/hide
Query:  MVIEDLKNSNTKPIKIREVWAHNLESEFLFIRAVIDRFPCVSMDTEFPGIVFSDPARPHQS---RPSDHYRLLKSNVDALHLIQIGLTLSDSAGNLPDLG
        MV  DL N++ K IKIREVWA NLESEF  IR +ID FPCVSMDTEFPGIVF+ P  P  S     SDHY+LLKSNVDAL+LIQIG+TLSDS GNLPDLG
Subjt:  MVIEDLKNSNTKPIKIREVWAHNLESEFLFIRAVIDRFPCVSMDTEFPGIVFSDPARPHQS---RPSDHYRLLKSNVDALHLIQIGLTLSDSAGNLPDLG

Query:  SDDARFIWEFNFMDFDVARDFHSPDSIDLLRRQGIDFDRNRAEGADSRRFAELMMSSGLVCSDSVTWVTFHSAYDFGYLVKILTQRSLPDRLDEFLAVLR
        +DD+RFIWEFNFMDFD+ARD ++PDSIDLLRRQGIDFDRNR EG DS RFAELMMSSGLVC+DSV+WVTFHSAYDF YL+KILTQ+ LP+R+DEFL VLR
Subjt:  SDDARFIWEFNFMDFDVARDFHSPDSIDLLRRQGIDFDRNRAEGADSRRFAELMMSSGLVCSDSVTWVTFHSAYDFGYLVKILTQRSLPDRLDEFLAVLR

Query:  VFFGDYVYDVKHMMRFCSSLYGGLDRIAKTLNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQQDVEKHAGILYGLEVF
        V FGD VYDVK+MMRFC SLYGGLDRIAK+LNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQ +VEKHAG+LYGLE F
Subjt:  VFFGDYVYDVKHMMRFCSSLYGGLDRIAKTLNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQQDVEKHAGILYGLEVF

XP_023541056.1 probable CCR4-associated factor 1 homolog 11 [Cucurbita pepo subsp. pepo]1.8e-12981.14Show/hide
Query:  MVIEDLKNSNTKPIKIREVWAHNLESEFLFIRAVIDRFPCVSMDTEFPGIVFSDPARP----HQSRPSDHYRLLKSNVDALHLIQIGLTLSDSAGNLPDL
        MV  DL N++ K IKIREVWA NLESEF  IR +ID FPCVSMDTEFPGIVF+ P  P    ++S  SDHY+LLKSNVDAL+LIQIG+TLSDS GNLPDL
Subjt:  MVIEDLKNSNTKPIKIREVWAHNLESEFLFIRAVIDRFPCVSMDTEFPGIVFSDPARP----HQSRPSDHYRLLKSNVDALHLIQIGLTLSDSAGNLPDL

Query:  GSDDARFIWEFNFMDFDVARDFHSPDSIDLLRRQGIDFDRNRAEGADSRRFAELMMSSGLVCSDSVTWVTFHSAYDFGYLVKILTQRSLPDRLDEFLAVL
        G+DD+RFIWEFNFMDFD+ARD ++PDSIDLLRRQGIDFDRNR EG DSRRFAELMMSSGLVC+DSV+WVTFHSAYDF YL+KILTQ+SLP+RLDEFL VL
Subjt:  GSDDARFIWEFNFMDFDVARDFHSPDSIDLLRRQGIDFDRNRAEGADSRRFAELMMSSGLVCSDSVTWVTFHSAYDFGYLVKILTQRSLPDRLDEFLAVL

Query:  RVFFGDYVYDVKHMMRFCSSLYGGLDRIAKTLNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQQDVEKHAGILYGLEVF
        RV FGD VYDVK+MMRFC SLYGGLDRIAK+LNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQ +VEKHAG+LYGLE F
Subjt:  RVFFGDYVYDVKHMMRFCSSLYGGLDRIAKTLNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQQDVEKHAGILYGLEVF

XP_038877224.1 probable CCR4-associated factor 1 homolog 11 [Benincasa hispida]5.8e-13383.87Show/hide
Query:  MVIEDLKNSNTKPIKIREVWAHNLESEFLFIRAVIDRFPCVSMDTEFPGIVFSDPARP--HQSRPSDHYRLLKSNVDALHLIQIGLTLSDSAGNLPDLGS
        MVI DL N N K IKIREVWA NLESEF  IR +ID+FPCVSMDTEFPGIVF+DPARP   QS+PSDHYRLLKSNVDALHLIQIG+TLSDS GNLPDLG+
Subjt:  MVIEDLKNSNTKPIKIREVWAHNLESEFLFIRAVIDRFPCVSMDTEFPGIVFSDPARP--HQSRPSDHYRLLKSNVDALHLIQIGLTLSDSAGNLPDLGS

Query:  DDARFIWEFNFMDFDVARDFHSPDSIDLLRRQGIDFDRNRAEGADSRRFAELMMSSGLVCSDSVTWVTFHSAYDFGYLVKILTQRSLPDRLDEFLAVLRV
        DD RFIWEFNFMDFDVARD H+PDSI+LLRRQGIDF+RNR EG DS RFAELMMSSGLVC++SV+WVTFHSAYDFGYLVKILTQR LPDR+DEFL VLRV
Subjt:  DDARFIWEFNFMDFDVARDFHSPDSIDLLRRQGIDFDRNRAEGADSRRFAELMMSSGLVCSDSVTWVTFHSAYDFGYLVKILTQRSLPDRLDEFLAVLRV

Query:  FFGDYVYDVKHMMRFCSSLYGGLDRIAKTLNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQQDVEKHAGILYGLEVF
        FFGD VYD+K++MRFC SLYGGLDRIAK LNVNRAVGKCHQAGSDSLLTWHAFQKMRDT+FVQ +++KHAG+LYGLEVF
Subjt:  FFGDYVYDVKHMMRFCSSLYGGLDRIAKTLNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQQDVEKHAGILYGLEVF

TrEMBL top hitse value%identityAlignment
A0A0A0LYC8 Poly(A)-specific ribonuclease2.5e-12176.62Show/hide
Query:  MVIEDLKNSNTKPIKIREVWAHNLESEFLFIRAVIDRFPCVSMDTEFPGIVFSDPARPHQ-SRPSDHYRLLKSNVDALHLIQIGLTLSDSAGNLPDLGSD
        M+I DL N+N K I+IREVWA NLESEF  IR +ID+FPCVSMDTEFPG++F     P   + PS HY+ LKSNVD LHLIQIG+TLSDS GNLPDLG+ 
Subjt:  MVIEDLKNSNTKPIKIREVWAHNLESEFLFIRAVIDRFPCVSMDTEFPGIVFSDPARPHQ-SRPSDHYRLLKSNVDALHLIQIGLTLSDSAGNLPDLGSD

Query:  DARFIWEFNFMDFDVARDFHSPDSIDLLRRQGIDFDRNRAEGADSRRFAELMMSSGLVCSDSVTWVTFHSAYDFGYLVKILTQRSLPDRLDEFLAVLRVF
        D RFIWEFNF DFDVARD H+P+SI+LLRRQGIDFDRNR EG DS RFAELMMSSGLVC+DSV+WVTFHSAYDFGYLVKILT + LP  L++FL V+R+F
Subjt:  DARFIWEFNFMDFDVARDFHSPDSIDLLRRQGIDFDRNRAEGADSRRFAELMMSSGLVCSDSVTWVTFHSAYDFGYLVKILTQRSLPDRLDEFLAVLRVF

Query:  FGDYVYDVKHMMRFCSSLYGGLDRIAKTLNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQQDVEKHAGILYGLEVF
        FGD VYD+K++MRFC SLYGGLDRIAKT+NVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQ ++ KHAG+LYGLEVF
Subjt:  FGDYVYDVKHMMRFCSSLYGGLDRIAKTLNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQQDVEKHAGILYGLEVF

A0A5A7T1W0 Poly(A)-specific ribonuclease4.2e-12176.16Show/hide
Query:  MVIEDLK---NSNTKPIKIREVWAHNLESEFLFIRAVIDRFPCVSMDTEFPGIVFSDPARP-HQSRPSDHYRLLKSNVDALHLIQIGLTLSDSAGNLPDL
        M+I DL     S  KPI+IREVWA NL+SEF  I  +IDRFPCVSMDTEFPG++F    +P   + PS HY+ LKSNVD LHLIQIG+TLSDS GNLPDL
Subjt:  MVIEDLK---NSNTKPIKIREVWAHNLESEFLFIRAVIDRFPCVSMDTEFPGIVFSDPARP-HQSRPSDHYRLLKSNVDALHLIQIGLTLSDSAGNLPDL

Query:  GSDDARFIWEFNFMDFDVARDFHSPDSIDLLRRQGIDFDRNRAEGADSRRFAELMMSSGLVCSDSVTWVTFHSAYDFGYLVKILTQRSLPDRLDEFLAVL
        G+ D RFIWEFNF DFDVARD H+PDSI+LLRRQGIDF+RNR EG DS RFAELMMSSGLVC++SV+WVTFHSAYDFGYLVKILTQ+ LP  L+EFL V+
Subjt:  GSDDARFIWEFNFMDFDVARDFHSPDSIDLLRRQGIDFDRNRAEGADSRRFAELMMSSGLVCSDSVTWVTFHSAYDFGYLVKILTQRSLPDRLDEFLAVL

Query:  RVFFGDYVYDVKHMMRFCSSLYGGLDRIAKTLNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQQDVEKHAGILYGLEVF
        RVFFGD VYD+K+MMRFC SLYGGLDRIAKT+NVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFV+ ++ KHAG+LYGLEVF
Subjt:  RVFFGDYVYDVKHMMRFCSSLYGGLDRIAKTLNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQQDVEKHAGILYGLEVF

A0A6J1CN71 Poly(A)-specific ribonuclease6.9e-13282.73Show/hide
Query:  MVIEDLKNSNTKPIKIREVWAHNLESEFLFIRAVIDRFPCVSMDTEFPGIVFSDPARPH--QSRPSDHYRLLKSNVDALHLIQIGLTLSDSAGNLPDLGS
        MV++DLKN N+KPI+IREVWA NLESEF  IR +ID+FPCVSMDTEFPG+VF+DPA+P+  Q+RPSDHYRLLKSNVDAL+LIQIG+TLSDS GNLPDLG+
Subjt:  MVIEDLKNSNTKPIKIREVWAHNLESEFLFIRAVIDRFPCVSMDTEFPGIVFSDPARPH--QSRPSDHYRLLKSNVDALHLIQIGLTLSDSAGNLPDLGS

Query:  DDARFIWEFNFMDFDVARDFHSPDSIDLLRRQGIDFDRNRAEGADSRRFAELMMSSGLVCSDSVTWVTFHSAYDFGYLVKILTQRSLPDRLDEFLAVLRV
          +RFIWEFNFMDFDVARD H+PDSI+LLRRQGIDFDRNR EG DS RFAELMMSSGLVC+DSV+WVTFHSAYDFGYLVK+LT+RSLP RL+EFL VLRV
Subjt:  DDARFIWEFNFMDFDVARDFHSPDSIDLLRRQGIDFDRNRAEGADSRRFAELMMSSGLVCSDSVTWVTFHSAYDFGYLVKILTQRSLPDRLDEFLAVLRV

Query:  FFGDYVYDVKHMMRFCSSLYGGLDRIAKTLNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQQDVEKHAGILYGLEV
        FFGD VYDVK+MMRFC SLYGGLDRIAK LNV+RAVGKCHQAGSDSLLTWHAFQKMRDT+FVQ  +EKHAG+LYGLEV
Subjt:  FFGDYVYDVKHMMRFCSSLYGGLDRIAKTLNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQQDVEKHAGILYGLEV

A0A6J1G223 Poly(A)-specific ribonuclease2.7e-12880.71Show/hide
Query:  MVIEDLKNSNTKPIKIREVWAHNLESEFLFIRAVIDRFPCVSMDTEFPGIVFSDPARPHQS---RPSDHYRLLKSNVDALHLIQIGLTLSDSAGNLPDLG
        MV  DL N++ K IKIREVWA NLESEF  IR +ID FPCVSMDTEFPGIVF+ P  P  +     SDHY+LLKSNVDAL+LIQIG+TLSDS GNLPDLG
Subjt:  MVIEDLKNSNTKPIKIREVWAHNLESEFLFIRAVIDRFPCVSMDTEFPGIVFSDPARPHQS---RPSDHYRLLKSNVDALHLIQIGLTLSDSAGNLPDLG

Query:  SDDARFIWEFNFMDFDVARDFHSPDSIDLLRRQGIDFDRNRAEGADSRRFAELMMSSGLVCSDSVTWVTFHSAYDFGYLVKILTQRSLPDRLDEFLAVLR
        +DD+RFIWEFNFMDFD+ARD ++PDSIDLLRRQGIDFDRNR EG DS RFAELMMSSGLVC+DSV+WVTFHSAYDF YL+KILTQ+SLP+RLDEFL VLR
Subjt:  SDDARFIWEFNFMDFDVARDFHSPDSIDLLRRQGIDFDRNRAEGADSRRFAELMMSSGLVCSDSVTWVTFHSAYDFGYLVKILTQRSLPDRLDEFLAVLR

Query:  VFFGDYVYDVKHMMRFCSSLYGGLDRIAKTLNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQQDVEKHAGILYGLEVF
        V FGD VYDVK+MMRFC SLYGGLDRIAK+LNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQ +VEKHAG+LYGLE F
Subjt:  VFFGDYVYDVKHMMRFCSSLYGGLDRIAKTLNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQQDVEKHAGILYGLEVF

A0A6J1HU54 Poly(A)-specific ribonuclease1.0e-12780.36Show/hide
Query:  MVIEDLKNSNTKPIKIREVWAHNLESEFLFIRAVIDRFPCVSMDTEFPGIVFSDPARPHQS---RPSDHYRLLKSNVDALHLIQIGLTLSDSAGNLPDLG
        MV  DL N++ K IKIREVWA NLESEF  IR +ID FPCVSMDTEFPGIVF+ P  P  S     SDHY+LLKSNVDAL+LIQIG+TLSDS GNLPDLG
Subjt:  MVIEDLKNSNTKPIKIREVWAHNLESEFLFIRAVIDRFPCVSMDTEFPGIVFSDPARPHQS---RPSDHYRLLKSNVDALHLIQIGLTLSDSAGNLPDLG

Query:  SDDARFIWEFNFMDFDVARDFHSPDSIDLLRRQGIDFDRNRAEGADSRRFAELMMSSGLVCSDSVTWVTFHSAYDFGYLVKILTQRSLPDRLDEFLAVLR
        +DD+RFIWEFNFMDFD+ARD ++PDSIDLLRRQGIDFDRNR EG DS RFAELMMSSGLVC+DSV+WVTFHSAYDF YL+KILTQ+ LP+R+DEFL VLR
Subjt:  SDDARFIWEFNFMDFDVARDFHSPDSIDLLRRQGIDFDRNRAEGADSRRFAELMMSSGLVCSDSVTWVTFHSAYDFGYLVKILTQRSLPDRLDEFLAVLR

Query:  VFFGDYVYDVKHMMRFCSSLYGGLDRIAKTLNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQQDVEKHAGILYGLEVF
        V FGD VYDVK+MMRFC SLYGGLDRIAK+LNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQ +VEKHAG+LYGLE F
Subjt:  VFFGDYVYDVKHMMRFCSSLYGGLDRIAKTLNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQQDVEKHAGILYGLEVF

SwissProt top hitse value%identityAlignment
Q9FMS6 Probable CCR4-associated factor 1 homolog 114.8e-10669.66Show/hide
Query:  IKIREVWAHNLESEFLFIRAVIDRFPCVSMDTEFPGIVF-SDPARPHQSRPSDHYRLLKSNVDALHLIQIGLTLSDSAGNLPDLGSD-DARFIWEFNFMD
        I IR+VWA+NLESEF  IR +++ +P +SMDTEFPG+++ +D     +  P+  Y LLKSNVDAL LIQ+GLTLSD+ GNLPDLG   + R+IWEFNF D
Subjt:  IKIREVWAHNLESEFLFIRAVIDRFPCVSMDTEFPGIVF-SDPARPHQSRPSDHYRLLKSNVDALHLIQIGLTLSDSAGNLPDLGSD-DARFIWEFNFMD

Query:  FDVARDFHSPDSIDLLRRQGIDFDRNRAEGADSRRFAELMMSSGLVCSDSVTWVTFHSAYDFGYLVKILTQRSLPDRLDEFLAVLRVFFGDYVYDVKHMM
        FDV RD H+PDSI+LLRR GIDF+RNR EG +S RFAELMMSSGL+C++SV+WVTFHSAYDFGYLVKILT+R LP  L EFL +LR FFGD VYDVKH+M
Subjt:  FDVARDFHSPDSIDLLRRQGIDFDRNRAEGADSRRFAELMMSSGLVCSDSVTWVTFHSAYDFGYLVKILTQRSLPDRLDEFLAVLRVFFGDYVYDVKHMM

Query:  RFCSS-LYGGLDRIAKTLNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQQDVEKHAGILYGLEVF
        RFC   LYGGLDR+A++L VNRAVGKCHQAGSDSLLTW AFQ+MRD +FV+   EKHAG+LYGLEVF
Subjt:  RFCSS-LYGGLDRIAKTLNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQQDVEKHAGILYGLEVF

Q9LEU4 Probable CCR4-associated factor 1 homolog 104.6e-7251.71Show/hide
Query:  IKIREVWAHNLESEFLFIRAVIDRFPCVSMDTEFPGIVFSDPARPHQSRPSDHYRLLKSNVDALHLIQIGLTLSDSAGNLPDLGSDDARFIWEFNFMDFD
        I IREVW +NL  EF  IR ++D+F  ++MDTEFPG+V   P    +     +YR LK NVD L LIQ+GLT SD  GNLP  G+D    IW+FNF +F+
Subjt:  IKIREVWAHNLESEFLFIRAVIDRFPCVSMDTEFPGIVFSDPARPHQSRPSDHYRLLKSNVDALHLIQIGLTLSDSAGNLPDLGSDDARFIWEFNFMDFD

Query:  VARDFHSPDSIDLLRRQGIDFDRNRAEGADSRRFAELMMSSGLVCSDSVTWVTFHSAYDFGYLVKILTQRSLPDRLDEFLAVLRVFFGDYVYDVKHMMRF
        +  D ++ +SI+LLR+ GIDF +N  +G D  RF ELMMSSG+V +D+++WVTFH  YDFGYLVK+LT + LP +  +F  +L V+F   VYD+KH+M F
Subjt:  VARDFHSPDSIDLLRRQGIDFDRNRAEGADSRRFAELMMSSGLVCSDSVTWVTFHSAYDFGYLVKILTQRSLPDRLDEFLAVLRVFFGDYVYDVKHMMRF

Query:  CSSLYGGLDRIAKTLNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQQDVEKHAGILYGLEV
        C+ L+GGL+R+A+ + V R VG CHQAGSDSLLT  +F+K+++ +F     EK+ G+LYGL V
Subjt:  CSSLYGGLDRIAKTLNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQQDVEKHAGILYGLEV

Q9LXM2 Probable CCR4-associated factor 1 homolog 92.2e-10669.2Show/hide
Query:  NSNTKP----IKIREVWAHNLESEFLFIRAVIDRFPCVSMDTEFPGIVFSDPARPHQSRPSDHYRLLKSNVDALHLIQIGLTLSDSAGNLPDLGSDDAR-
        N + KP    +  REVWA NLESEF  I  +ID +P +SMDTEFPG++F    R   + P D Y LLK+NVDAL LIQ+GLTLSD  GNLPDLG D  R 
Subjt:  NSNTKP----IKIREVWAHNLESEFLFIRAVIDRFPCVSMDTEFPGIVFSDPARPHQSRPSDHYRLLKSNVDALHLIQIGLTLSDSAGNLPDLGSDDAR-

Query:  FIWEFNFMDFDVARDFHSPDSIDLLRRQGIDFDRNRAEGADSRRFAELMMSSGLVCSDSVTWVTFHSAYDFGYLVKILTQRSLPDRLDEFLAVLRVFFGD
        FIWEFNF DFDVARD H+PDSI+LLRRQGIDF+RN  +G +S RFAELMMSSGLVC++ V+WVTFHSAYDFGYL+KILT+R LP  L EF  V+RV FG+
Subjt:  FIWEFNFMDFDVARDFHSPDSIDLLRRQGIDFDRNRAEGADSRRFAELMMSSGLVCSDSVTWVTFHSAYDFGYLVKILTQRSLPDRLDEFLAVLRVFFGD

Query:  YVYDVKHMMRFCS-SLYGGLDRIAKTLNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQQDVEKHAGILYGLEVF
         VYDVKHMM+FC   L+GGLDR+A+TL VNRAVGKCHQAGSDSLLTWHAFQ+MRD +FVQ   EKHAG+LYGLEVF
Subjt:  YVYDVKHMMRFCS-SLYGGLDRIAKTLNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQQDVEKHAGILYGLEVF

Q9SAI2 Probable CCR4-associated factor 1 homolog 61.1e-7353.23Show/hide
Query:  IKIREVWAHNLESEFLFIRAVIDRFPCVSMDTEFPGIVFSDPARPHQSRPSDHYRLLKSNVDALHLIQIGLTLSDSAGNLPDLGSDDARFIWEFNFMDFD
        I+IREVW  NL+ E   IR V+D FP V+MDTEFPGIV   P    +S    HY  LK+NV+ L +IQ+GLT S+  GNLP  G+ D   IW+FNF +FD
Subjt:  IKIREVWAHNLESEFLFIRAVIDRFPCVSMDTEFPGIVFSDPARPHQSRPSDHYRLLKSNVDALHLIQIGLTLSDSAGNLPDLGSDDARFIWEFNFMDFD

Query:  VARDFHSPDSIDLLRRQGIDFDRNRAEGADSRRFAELMMSSGLVCSDSVTWVTFHSAYDFGYLVKILTQRSLPDRLDEFLAVLRVFFGDYVYDVKHMMRF
        +  D  + DSI+LL++ GID  +N  +G DS+RFAEL+MSSG+V +++V WVTFHS YDFGYL+K+LT ++LPD   +F  ++ V+F   VYD+KH+M+F
Subjt:  VARDFHSPDSIDLLRRQGIDFDRNRAEGADSRRFAELMMSSGLVCSDSVTWVTFHSAYDFGYLVKILTQRSLPDRLDEFLAVLRVFFGDYVYDVKHMMRF

Query:  CSSLYGGLDRIAKTLNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQQDVEKHAGILYGLEV
        C+SL+GGL+++A+ L V R VG CHQAGSDSLLT   F+K+++ FFV   + K++G+LYGL V
Subjt:  CSSLYGGLDRIAKTLNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQQDVEKHAGILYGLEV

Q9SKZ2 Probable CCR4-associated factor 1 homolog 73.6e-7754.37Show/hide
Query:  IKIREVWAHNLESEFLFIRAVIDRFPCVSMDTEFPGIVFSDPARPHQSRPSDHYRLLKSNVDALHLIQIGLTLSDSAGNLPDLGSDDARFIWEFNFMDFD
        I+IREVW  NLESE   IR V+D FP V+MDTEFPGIV   P    ++    HY  LK+NV+ L +IQ+GLT SD  GNLP  G+D+   IW+FNF +FD
Subjt:  IKIREVWAHNLESEFLFIRAVIDRFPCVSMDTEFPGIVFSDPARPHQSRPSDHYRLLKSNVDALHLIQIGLTLSDSAGNLPDLGSDDARFIWEFNFMDFD

Query:  VARDFHSPDSIDLLRRQGIDFDRNRAEGADSRRFAELMMSSGLVCSDSVTWVTFHSAYDFGYLVKILTQRSLPDRLDEFLAVLRVFFGDYVYDVKHMMRF
        +  D ++ DSI+LLR+ GIDF +N   G DS+RFAEL+MSSG+V +++V WVTFHS YDFGYL+K+LT ++LP+    F  ++ V+F   VYD+KH+M+F
Subjt:  VARDFHSPDSIDLLRRQGIDFDRNRAEGADSRRFAELMMSSGLVCSDSVTWVTFHSAYDFGYLVKILTQRSLPDRLDEFLAVLRVFFGDYVYDVKHMMRF

Query:  CSSLYGGLDRIAKTLNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQQDVEKHAGILYGLEV
        C+SL+GGL+++A+ L+V R VG CHQAGSDSLLT   F+K+++ FF+   +EK++G+LYGL V
Subjt:  CSSLYGGLDRIAKTLNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQQDVEKHAGILYGLEV

Arabidopsis top hitse value%identityAlignment
AT1G80780.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein7.7e-7553.23Show/hide
Query:  IKIREVWAHNLESEFLFIRAVIDRFPCVSMDTEFPGIVFSDPARPHQSRPSDHYRLLKSNVDALHLIQIGLTLSDSAGNLPDLGSDDARFIWEFNFMDFD
        I+IREVW  NL+ E   IR V+D FP V+MDTEFPGIV   P    +S    HY  LK+NV+ L +IQ+GLT S+  GNLP  G+ D   IW+FNF +FD
Subjt:  IKIREVWAHNLESEFLFIRAVIDRFPCVSMDTEFPGIVFSDPARPHQSRPSDHYRLLKSNVDALHLIQIGLTLSDSAGNLPDLGSDDARFIWEFNFMDFD

Query:  VARDFHSPDSIDLLRRQGIDFDRNRAEGADSRRFAELMMSSGLVCSDSVTWVTFHSAYDFGYLVKILTQRSLPDRLDEFLAVLRVFFGDYVYDVKHMMRF
        +  D  + DSI+LL++ GID  +N  +G DS+RFAEL+MSSG+V +++V WVTFHS YDFGYL+K+LT ++LPD   +F  ++ V+F   VYD+KH+M+F
Subjt:  VARDFHSPDSIDLLRRQGIDFDRNRAEGADSRRFAELMMSSGLVCSDSVTWVTFHSAYDFGYLVKILTQRSLPDRLDEFLAVLRVFFGDYVYDVKHMMRF

Query:  CSSLYGGLDRIAKTLNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQQDVEKHAGILYGLEV
        C+SL+GGL+++A+ L V R VG CHQAGSDSLLT   F+K+++ FFV   + K++G+LYGL V
Subjt:  CSSLYGGLDRIAKTLNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQQDVEKHAGILYGLEV

AT1G80780.2 Polynucleotidyl transferase, ribonuclease H-like superfamily protein7.7e-7553.23Show/hide
Query:  IKIREVWAHNLESEFLFIRAVIDRFPCVSMDTEFPGIVFSDPARPHQSRPSDHYRLLKSNVDALHLIQIGLTLSDSAGNLPDLGSDDARFIWEFNFMDFD
        I+IREVW  NL+ E   IR V+D FP V+MDTEFPGIV   P    +S    HY  LK+NV+ L +IQ+GLT S+  GNLP  G+ D   IW+FNF +FD
Subjt:  IKIREVWAHNLESEFLFIRAVIDRFPCVSMDTEFPGIVFSDPARPHQSRPSDHYRLLKSNVDALHLIQIGLTLSDSAGNLPDLGSDDARFIWEFNFMDFD

Query:  VARDFHSPDSIDLLRRQGIDFDRNRAEGADSRRFAELMMSSGLVCSDSVTWVTFHSAYDFGYLVKILTQRSLPDRLDEFLAVLRVFFGDYVYDVKHMMRF
        +  D  + DSI+LL++ GID  +N  +G DS+RFAEL+MSSG+V +++V WVTFHS YDFGYL+K+LT ++LPD   +F  ++ V+F   VYD+KH+M+F
Subjt:  VARDFHSPDSIDLLRRQGIDFDRNRAEGADSRRFAELMMSSGLVCSDSVTWVTFHSAYDFGYLVKILTQRSLPDRLDEFLAVLRVFFGDYVYDVKHMMRF

Query:  CSSLYGGLDRIAKTLNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQQDVEKHAGILYGLEV
        C+SL+GGL+++A+ L V R VG CHQAGSDSLLT   F+K+++ FFV   + K++G+LYGL V
Subjt:  CSSLYGGLDRIAKTLNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQQDVEKHAGILYGLEV

AT2G32070.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein2.6e-7854.37Show/hide
Query:  IKIREVWAHNLESEFLFIRAVIDRFPCVSMDTEFPGIVFSDPARPHQSRPSDHYRLLKSNVDALHLIQIGLTLSDSAGNLPDLGSDDARFIWEFNFMDFD
        I+IREVW  NLESE   IR V+D FP V+MDTEFPGIV   P    ++    HY  LK+NV+ L +IQ+GLT SD  GNLP  G+D+   IW+FNF +FD
Subjt:  IKIREVWAHNLESEFLFIRAVIDRFPCVSMDTEFPGIVFSDPARPHQSRPSDHYRLLKSNVDALHLIQIGLTLSDSAGNLPDLGSDDARFIWEFNFMDFD

Query:  VARDFHSPDSIDLLRRQGIDFDRNRAEGADSRRFAELMMSSGLVCSDSVTWVTFHSAYDFGYLVKILTQRSLPDRLDEFLAVLRVFFGDYVYDVKHMMRF
        +  D ++ DSI+LLR+ GIDF +N   G DS+RFAEL+MSSG+V +++V WVTFHS YDFGYL+K+LT ++LP+    F  ++ V+F   VYD+KH+M+F
Subjt:  VARDFHSPDSIDLLRRQGIDFDRNRAEGADSRRFAELMMSSGLVCSDSVTWVTFHSAYDFGYLVKILTQRSLPDRLDEFLAVLRVFFGDYVYDVKHMMRF

Query:  CSSLYGGLDRIAKTLNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQQDVEKHAGILYGLEV
        C+SL+GGL+++A+ L+V R VG CHQAGSDSLLT   F+K+++ FF+   +EK++G+LYGL V
Subjt:  CSSLYGGLDRIAKTLNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQQDVEKHAGILYGLEV

AT3G44260.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.5e-10769.2Show/hide
Query:  NSNTKP----IKIREVWAHNLESEFLFIRAVIDRFPCVSMDTEFPGIVFSDPARPHQSRPSDHYRLLKSNVDALHLIQIGLTLSDSAGNLPDLGSDDAR-
        N + KP    +  REVWA NLESEF  I  +ID +P +SMDTEFPG++F    R   + P D Y LLK+NVDAL LIQ+GLTLSD  GNLPDLG D  R 
Subjt:  NSNTKP----IKIREVWAHNLESEFLFIRAVIDRFPCVSMDTEFPGIVFSDPARPHQSRPSDHYRLLKSNVDALHLIQIGLTLSDSAGNLPDLGSDDAR-

Query:  FIWEFNFMDFDVARDFHSPDSIDLLRRQGIDFDRNRAEGADSRRFAELMMSSGLVCSDSVTWVTFHSAYDFGYLVKILTQRSLPDRLDEFLAVLRVFFGD
        FIWEFNF DFDVARD H+PDSI+LLRRQGIDF+RN  +G +S RFAELMMSSGLVC++ V+WVTFHSAYDFGYL+KILT+R LP  L EF  V+RV FG+
Subjt:  FIWEFNFMDFDVARDFHSPDSIDLLRRQGIDFDRNRAEGADSRRFAELMMSSGLVCSDSVTWVTFHSAYDFGYLVKILTQRSLPDRLDEFLAVLRVFFGD

Query:  YVYDVKHMMRFCS-SLYGGLDRIAKTLNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQQDVEKHAGILYGLEVF
         VYDVKHMM+FC   L+GGLDR+A+TL VNRAVGKCHQAGSDSLLTWHAFQ+MRD +FVQ   EKHAG+LYGLEVF
Subjt:  YVYDVKHMMRFCS-SLYGGLDRIAKTLNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQQDVEKHAGILYGLEVF

AT5G22250.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein3.4e-10769.66Show/hide
Query:  IKIREVWAHNLESEFLFIRAVIDRFPCVSMDTEFPGIVF-SDPARPHQSRPSDHYRLLKSNVDALHLIQIGLTLSDSAGNLPDLGSD-DARFIWEFNFMD
        I IR+VWA+NLESEF  IR +++ +P +SMDTEFPG+++ +D     +  P+  Y LLKSNVDAL LIQ+GLTLSD+ GNLPDLG   + R+IWEFNF D
Subjt:  IKIREVWAHNLESEFLFIRAVIDRFPCVSMDTEFPGIVF-SDPARPHQSRPSDHYRLLKSNVDALHLIQIGLTLSDSAGNLPDLGSD-DARFIWEFNFMD

Query:  FDVARDFHSPDSIDLLRRQGIDFDRNRAEGADSRRFAELMMSSGLVCSDSVTWVTFHSAYDFGYLVKILTQRSLPDRLDEFLAVLRVFFGDYVYDVKHMM
        FDV RD H+PDSI+LLRR GIDF+RNR EG +S RFAELMMSSGL+C++SV+WVTFHSAYDFGYLVKILT+R LP  L EFL +LR FFGD VYDVKH+M
Subjt:  FDVARDFHSPDSIDLLRRQGIDFDRNRAEGADSRRFAELMMSSGLVCSDSVTWVTFHSAYDFGYLVKILTQRSLPDRLDEFLAVLRVFFGDYVYDVKHMM

Query:  RFCSS-LYGGLDRIAKTLNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQQDVEKHAGILYGLEVF
        RFC   LYGGLDR+A++L VNRAVGKCHQAGSDSLLTW AFQ+MRD +FV+   EKHAG+LYGLEVF
Subjt:  RFCSS-LYGGLDRIAKTLNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQQDVEKHAGILYGLEVF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTATCGAAGATCTGAAGAACAGCAACACCAAACCCATCAAGATCCGTGAGGTTTGGGCTCACAATCTCGAATCCGAGTTCCTCTTCATCCGCGCCGTCATCGATCG
CTTCCCTTGCGTCTCCATGGACACCGAGTTCCCCGGAATCGTCTTCTCCGATCCCGCCCGCCCCCACCAATCCCGCCCCTCCGACCACTACCGCCTCCTCAAATCCAACG
TCGACGCCCTCCATCTCATCCAGATCGGCCTCACCCTCTCCGACTCCGCCGGAAACCTCCCCGATCTCGGCTCCGACGACGCCCGCTTCATCTGGGAGTTCAACTTCATG
GACTTCGACGTCGCGCGTGACTTCCACTCGCCGGACTCCATCGACCTCCTCCGCCGCCAGGGCATCGACTTCGACCGGAACCGGGCGGAGGGGGCCGACTCGCGCCGGTT
CGCCGAGCTGATGATGTCCTCGGGCCTCGTCTGCAGCGACTCGGTGACCTGGGTGACGTTCCACAGCGCCTACGACTTCGGGTATCTGGTTAAGATCCTCACGCAGCGGA
GCCTTCCGGATCGGCTCGACGAATTCCTCGCCGTTCTTAGGGTTTTCTTCGGCGATTACGTGTACGACGTGAAGCACATGATGCGGTTCTGCAGCAGCCTCTACGGCGGC
CTGGACCGGATCGCCAAAACGCTCAATGTGAACCGGGCCGTGGGGAAGTGCCATCAGGCCGGGTCGGATAGTTTGCTGACGTGGCATGCGTTTCAGAAGATGAGGGATAC
CTTTTTTGTACAGCAGGATGTGGAGAAACATGCTGGGATATTGTATGGATTGGAGGTGTTCTAA
mRNA sequenceShow/hide mRNA sequence
TCGCACCTTCCATAAATCTCTCACTTTCTTCCCATTTGAATCTCTATAAAAATAAAAAAAACTCCCCCAAGATTAATCTTCCATCCTAAATCTCATTTCTAACTTCCTCA
TCAAATCCGGATCGGATCGCCATGGTTATCGAAGATCTGAAGAACAGCAACACCAAACCCATCAAGATCCGTGAGGTTTGGGCTCACAATCTCGAATCCGAGTTCCTCTT
CATCCGCGCCGTCATCGATCGCTTCCCTTGCGTCTCCATGGACACCGAGTTCCCCGGAATCGTCTTCTCCGATCCCGCCCGCCCCCACCAATCCCGCCCCTCCGACCACT
ACCGCCTCCTCAAATCCAACGTCGACGCCCTCCATCTCATCCAGATCGGCCTCACCCTCTCCGACTCCGCCGGAAACCTCCCCGATCTCGGCTCCGACGACGCCCGCTTC
ATCTGGGAGTTCAACTTCATGGACTTCGACGTCGCGCGTGACTTCCACTCGCCGGACTCCATCGACCTCCTCCGCCGCCAGGGCATCGACTTCGACCGGAACCGGGCGGA
GGGGGCCGACTCGCGCCGGTTCGCCGAGCTGATGATGTCCTCGGGCCTCGTCTGCAGCGACTCGGTGACCTGGGTGACGTTCCACAGCGCCTACGACTTCGGGTATCTGG
TTAAGATCCTCACGCAGCGGAGCCTTCCGGATCGGCTCGACGAATTCCTCGCCGTTCTTAGGGTTTTCTTCGGCGATTACGTGTACGACGTGAAGCACATGATGCGGTTC
TGCAGCAGCCTCTACGGCGGCCTGGACCGGATCGCCAAAACGCTCAATGTGAACCGGGCCGTGGGGAAGTGCCATCAGGCCGGGTCGGATAGTTTGCTGACGTGGCATGC
GTTTCAGAAGATGAGGGATACCTTTTTTGTACAGCAGGATGTGGAGAAACATGCTGGGATATTGTATGGATTGGAGGTGTTCTAAAAAAAAATAGAAAATTTAATTAAAT
AAAAATGTTTATTTATTATTTATTTATTTAATTATTTGTCTTTTTTTAATCTTTTAAAAGCTATAATAATTCTATTGGGAATTGGCTAATATATATATATAATGTACAAA
CTTC
Protein sequenceShow/hide protein sequence
MVIEDLKNSNTKPIKIREVWAHNLESEFLFIRAVIDRFPCVSMDTEFPGIVFSDPARPHQSRPSDHYRLLKSNVDALHLIQIGLTLSDSAGNLPDLGSDDARFIWEFNFM
DFDVARDFHSPDSIDLLRRQGIDFDRNRAEGADSRRFAELMMSSGLVCSDSVTWVTFHSAYDFGYLVKILTQRSLPDRLDEFLAVLRVFFGDYVYDVKHMMRFCSSLYGG
LDRIAKTLNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQQDVEKHAGILYGLEVF