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Sed0027548 (gene) of Chayote v1 genome

Gene IDSed0027548
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG14:23219434..23220365
RNA-Seq ExpressionSed0027548
SyntenySed0027548
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_018359597.1 PREDICTED: limulus clotting factor C-like isoform X1 [Trachymyrmex cornetzi]6.4e-0525.53Show/hide
Query:  DLHDLGNNQNHPLPVNDQAPFDNRTLQDNLLDLGNNQNHSLLANDQAPLAPFGNQTLQEDHPDLGNNQNHPLPANDQALFQSNTSGDLPDLGNNQNHPLT
        D+ +    +N+P P ND+  + +    +N     NN+NH    N++    P       E++P   N++N+P P ND+   + N + + P   NN+N+P  
Subjt:  DLHDLGNNQNHPLPVNDQAPFDNRTLQDNLLDLGNNQNHSLLANDQAPLAPFGNQTLQEDHPDLGNNQNHPLPANDQALFQSNTSGDLPDLGNNQNHPLT

Query:  AIDLAPFDTRTLQDDLPNLGNNHNHPLPANDQAPFENRTLQDDLLDLENNKNHPLPVNDPAPFGNRTLQDDLLDPGNNQNYPLSTNDQ
          +   +      ++     NN N+P P ND+  +   +  ++     NN+N+P P N          +++   P NN+NYP   ND+
Subjt:  AIDLAPFDTRTLQDDLPNLGNNHNHPLPANDQAPFENRTLQDDLLDLENNKNHPLPVNDPAPFGNRTLQDDLLDPGNNQNYPLSTNDQ

TrEMBL top hitse value%identityAlignment
A0A674BIB2 Uncharacterized protein9.1e-0535.05Show/hide
Query:  NNQNHPLPVNDQAPFDNRTLQDNLLDL---GNNQNHSLLANDQAPLAPFGNQTL-----QEDHPDLGNNQNHPLPAND--QALFQSNTSGDLPDLGNNQN
        +N N PLP N+     N  L  N  +    GNN N  L  N+     P  N         ++ P  GNN N PLP N+  + L  +N    LP  GNN N
Subjt:  NNQNHPLPVNDQAPFDNRTLQDNLLDL---GNNQNHSLLANDQAPLAPFGNQTL-----QEDHPDLGNNQNHPLPAND--QALFQSNTSGDLPDLGNNQN

Query:  HPLTAID-LAPFDTRTLQDDLPNLGNNHNHPLPAND-QAPFENRTLQDDLLDLENNKNHPLPVND-PAPFGNRTLQDDLLDPGNNQNYPLSTND
         PL   +  AP      +  LP  GNNH  PLP N+ +AP         L    NN N PLP N+  AP      +  L  PGNN   PL  N+
Subjt:  HPLTAID-LAPFDTRTLQDDLPNLGNNHNHPLPAND-QAPFENRTLQDDLLDLENNKNHPLPVND-PAPFGNRTLQDDLLDPGNNQNYPLSTND

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATAATCGTGCGATCCCTGAGTTATCTTCCAAAGTCGATAGCTTCGACGATCGCCTTGACGACTTTGCTTCTTTCAGGAATCGAACACTTCAAAACGATCTTCATGA
TCTGGGCAATAATCAAAATCATCCACTTCCTGTCAATGATCAGGCTCCTTTCGACAATCGAACACTTCAAGATAATCTTCTTGATCTGGGCAATAATCAAAATCATTCAC
TTCTTGCCAATGATCAGGCTCCTCTCGCTCCTTTCGGCAATCAAACACTTCAAGAGGATCATCCTGATCTAGGCAATAATCAGAATCATCCACTTCCTGCCAATGATCAA
GCTCTTTTCCAATCGAACACTTCAGGCGATCTTCCTGATCTGGGCAATAATCAAAATCATCCACTTACTGCCATTGATCTAGCTCCTTTCGACACTCGAACACTTCAAGA
CGATCTTCCTAATCTGGGCAATAATCATAATCATCCACTTCCTGCCAATGATCAGGCTCCTTTCGAAAATCGAACACTTCAAGACGATCTTCTTGATCTGGAAAATAATA
AGAATCATCCACTTCCCGTTAATGATCCGGCTCCTTTCGGCAATCGAACACTTCAAGACGATCTTCTTGATCCAGGCAATAATCAAAATTATCCACTTTCTACCAATGAT
CAAACTCTTTTTGACAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGATAATCGTGCGATCCCTGAGTTATCTTCCAAAGTCGATAGCTTCGACGATCGCCTTGACGACTTTGCTTCTTTCAGGAATCGAACACTTCAAAACGATCTTCATGA
TCTGGGCAATAATCAAAATCATCCACTTCCTGTCAATGATCAGGCTCCTTTCGACAATCGAACACTTCAAGATAATCTTCTTGATCTGGGCAATAATCAAAATCATTCAC
TTCTTGCCAATGATCAGGCTCCTCTCGCTCCTTTCGGCAATCAAACACTTCAAGAGGATCATCCTGATCTAGGCAATAATCAGAATCATCCACTTCCTGCCAATGATCAA
GCTCTTTTCCAATCGAACACTTCAGGCGATCTTCCTGATCTGGGCAATAATCAAAATCATCCACTTACTGCCATTGATCTAGCTCCTTTCGACACTCGAACACTTCAAGA
CGATCTTCCTAATCTGGGCAATAATCATAATCATCCACTTCCTGCCAATGATCAGGCTCCTTTCGAAAATCGAACACTTCAAGACGATCTTCTTGATCTGGAAAATAATA
AGAATCATCCACTTCCCGTTAATGATCCGGCTCCTTTCGGCAATCGAACACTTCAAGACGATCTTCTTGATCCAGGCAATAATCAAAATTATCCACTTTCTACCAATGAT
CAAACTCTTTTTGACAATTGA
Protein sequenceShow/hide protein sequence
MDNRAIPELSSKVDSFDDRLDDFASFRNRTLQNDLHDLGNNQNHPLPVNDQAPFDNRTLQDNLLDLGNNQNHSLLANDQAPLAPFGNQTLQEDHPDLGNNQNHPLPANDQ
ALFQSNTSGDLPDLGNNQNHPLTAIDLAPFDTRTLQDDLPNLGNNHNHPLPANDQAPFENRTLQDDLLDLENNKNHPLPVNDPAPFGNRTLQDDLLDPGNNQNYPLSTND
QTLFDN