| GenBank top hits | e value | %identity | Alignment |
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| KAA0032697.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] | 1.8e-66 | 51.75 | Show/hide |
Query: MELAAVVFALKIWRHYLYGEKIQIFSDHQSLKYFFTQKDLNMRQRRWLKLVKDYDCEILYHPGKANVVADALSRKTSHLATLANPKSIIRKDLERAEIAV
+ELAAV+FALKIWRHYLYGEKIQIF+DH+SLKYFFTQ +LNMRQRRWL+LVKDY+CEILYHPGKANVVADALSRK +H ATL ++ + +DLERAEIAV
Subjt: MELAAVVFALKIWRHYLYGEKIQIFSDHQSLKYFFTQKDLNMRQRRWLKLVKDYDCEILYHPGKANVVADALSRKTSHLATLANPKSIIRKDLERAEIAV
Query: LLGDVTAE---------------SSSIDHP-------------------AFDGGLRYKGRLCVPADAGIRSELLTEAHTSPFAWHPGGNKMYQDLKQTFW
+G+VT++ + ++ P + D GL + GRLCVP D+ ++ ELL EA++SPFA HPG +MYQDL+ +W
Subjt: LLGDVTAE---------------SSSIDHP-------------------AFDGGLRYKGRLCVPADAGIRSELLTEAHTSPFAWHPGGNKMYQDLKQTFW
Query: WMGMKREIAHLSVGVSLVGQVKAPRRKTSEVATDRSGCHGGSGRKLPWILFRDCPEP
W MKRE+A + Q+KAPR++ C G+GR W RDCP P
Subjt: WMGMKREIAHLSVGVSLVGQVKAPRRKTSEVATDRSGCHGGSGRKLPWILFRDCPEP
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| KAA0037676.1 pol protein [Cucumis melo var. makuwa] | 1.2e-65 | 60.78 | Show/hide |
Query: MELAAVVFALKIWRHYLYGEKIQIFSDHQSLKYFFTQKDLNMRQRRWLKLVKDYDCEILYHPGKANVVADALSRKTSHLATLANPKSIIRKDLERAEIAV
+ELAAVVFALKIWRHYLYGEKIQIF+DH+SLKYFFTQK+LNMRQRRWL+LV DYDCEILYHPGK NVVADALSRK +H A L ++ + +D ERAEIAV
Subjt: MELAAVVFALKIWRHYLYGEKIQIFSDHQSLKYFFTQKDLNMRQRRWLKLVKDYDCEILYHPGKANVVADALSRKTSHLATLANPKSIIRKDLERAEIAV
Query: LLGDVTAESSSIDHP-------AFDGGLRYKGRLCVPADAGIRSELLTEAHTSPFAWHPGGNKMYQDLKQTFWWMGMKREIAHLSVGVSLVGQVKAPRRK
+G+VT++ ++ + D GL ++GRLCVP D+ +++ELLTEA++SPF HPG KMYQDL+ +WW MKRE+A + QVKAPR++
Subjt: LLGDVTAESSSIDHP-------AFDGGLRYKGRLCVPADAGIRSELLTEAHTSPFAWHPGGNKMYQDLKQTFWWMGMKREIAHLSVGVSLVGQVKAPRRK
Query: TSEV
+E+
Subjt: TSEV
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| KAA0053351.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] | 4.7e-67 | 64 | Show/hide |
Query: MELAAVVFALKIWRHYLYGEKIQIFSDHQSLKYFFTQKDLNMRQRRWLKLVKDYDCEILYHPGKANVVADALSRKTSHLATLANPKSIIRKDLERAEIAV
+EL AVVFALKIWRHYLYGEKIQIF+DH+SLKYFFTQK+LNMRQRRWL+LVKDYDCEILYHPGKANVVADALSRK SH A L ++ + +DLERAEIAV
Subjt: MELAAVVFALKIWRHYLYGEKIQIFSDHQSLKYFFTQKDLNMRQRRWLKLVKDYDCEILYHPGKANVVADALSRKTSHLATLANPKSIIRKDLERAEIAV
Query: LLGDVTAESSSID-------HPAFDGGLRYKGRLCVPADAGIRSELLTEAHTSPFAWHPGGNKMYQDLKQTFWWMGMKREIAHLSVGVSLVGQVKAPRRK
+G VT + + + + DGGL ++ RLCVP+D+ +++ELL+EAH+SPF+ HPG KMYQDLK+ +WW MKRE+A + QVKAPR+K
Subjt: LLGDVTAESSSID-------HPAFDGGLRYKGRLCVPADAGIRSELLTEAHTSPFAWHPGGNKMYQDLKQTFWWMGMKREIAHLSVGVSLVGQVKAPRRK
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| KAA0063793.1 pol protein [Cucumis melo var. makuwa] | 8.8e-66 | 50.38 | Show/hide |
Query: MELAAVVFALKIWRHYLYGEKIQIFSDHQSLKYFFTQKDLNMRQRRWLKLVKDYDCEILYHPGKANVVADALSRKTSHLATLANPKSIIRKDLERAEIAV
+ELAAVVFALKIWRHYLYGEKIQI++DH+SLKYFFTQK+LNMRQRRWL+LVKDYDCEILYHPGKANVVADALSRK +H A L ++ + +D ERAEIAV
Subjt: MELAAVVFALKIWRHYLYGEKIQIFSDHQSLKYFFTQKDLNMRQRRWLKLVKDYDCEILYHPGKANVVADALSRKTSHLATLANPKSIIRKDLERAEIAV
Query: LLGDVTAE---------------SSSIDHP-------------------AFDGGLRYKGRLCVPADAGIRSELLTEAHTSPFAWHPGGNKMYQDLKQTFW
+G+VTA+ ++ ++ P + D GL ++GRLCVP D +++ELLTEAH+SPF HPG KMYQDL+ +W
Subjt: LLGDVTAE---------------SSSIDHP-------------------AFDGGLRYKGRLCVPADAGIRSELLTEAHTSPFAWHPGGNKMYQDLKQTFW
Query: WMGMKREIAHLSVGVSLVGQVKAPRRKTSEVATDRSGCHGGSGRKLPWILFRDCPEPLEDMHADLG
W GMKR++A + QVKAPR+ + + S G + P+ + +H DLG
Subjt: WMGMKREIAHLSVGVSLVGQVKAPRRKTSEVATDRSGCHGGSGRKLPWILFRDCPEPLEDMHADLG
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| TYJ98730.1 pol protein [Cucumis melo var. makuwa] | 1.8e-66 | 51.75 | Show/hide |
Query: MELAAVVFALKIWRHYLYGEKIQIFSDHQSLKYFFTQKDLNMRQRRWLKLVKDYDCEILYHPGKANVVADALSRKTSHLATLANPKSIIRKDLERAEIAV
+ELAAV+FALKIWRHYLYGEKIQIF+DH+SLKYFFTQ +LNMRQRRWL+LVKDY+CEILYHPGKANVVADALSRK +H ATL ++ + +DLERAEIAV
Subjt: MELAAVVFALKIWRHYLYGEKIQIFSDHQSLKYFFTQKDLNMRQRRWLKLVKDYDCEILYHPGKANVVADALSRKTSHLATLANPKSIIRKDLERAEIAV
Query: LLGDVTAE---------------SSSIDHP-------------------AFDGGLRYKGRLCVPADAGIRSELLTEAHTSPFAWHPGGNKMYQDLKQTFW
+G+VT++ + ++ P + D GL + GRLCVP D+ ++ ELL EA++SPFA HPG +MYQDL+ +W
Subjt: LLGDVTAE---------------SSSIDHP-------------------AFDGGLRYKGRLCVPADAGIRSELLTEAHTSPFAWHPGGNKMYQDLKQTFW
Query: WMGMKREIAHLSVGVSLVGQVKAPRRKTSEVATDRSGCHGGSGRKLPWILFRDCPEP
W MKRE+A + Q+KAPR++ C G+GR W RDCP P
Subjt: WMGMKREIAHLSVGVSLVGQVKAPRRKTSEVATDRSGCHGGSGRKLPWILFRDCPEP
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7STR6 Reverse transcriptase | 8.6e-67 | 51.75 | Show/hide |
Query: MELAAVVFALKIWRHYLYGEKIQIFSDHQSLKYFFTQKDLNMRQRRWLKLVKDYDCEILYHPGKANVVADALSRKTSHLATLANPKSIIRKDLERAEIAV
+ELAAV+FALKIWRHYLYGEKIQIF+DH+SLKYFFTQ +LNMRQRRWL+LVKDY+CEILYHPGKANVVADALSRK +H ATL ++ + +DLERAEIAV
Subjt: MELAAVVFALKIWRHYLYGEKIQIFSDHQSLKYFFTQKDLNMRQRRWLKLVKDYDCEILYHPGKANVVADALSRKTSHLATLANPKSIIRKDLERAEIAV
Query: LLGDVTAE---------------SSSIDHP-------------------AFDGGLRYKGRLCVPADAGIRSELLTEAHTSPFAWHPGGNKMYQDLKQTFW
+G+VT++ + ++ P + D GL + GRLCVP D+ ++ ELL EA++SPFA HPG +MYQDL+ +W
Subjt: LLGDVTAE---------------SSSIDHP-------------------AFDGGLRYKGRLCVPADAGIRSELLTEAHTSPFAWHPGGNKMYQDLKQTFW
Query: WMGMKREIAHLSVGVSLVGQVKAPRRKTSEVATDRSGCHGGSGRKLPWILFRDCPEP
W MKRE+A + Q+KAPR++ C G+GR W RDCP P
Subjt: WMGMKREIAHLSVGVSLVGQVKAPRRKTSEVATDRSGCHGGSGRKLPWILFRDCPEP
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| A0A5A7T690 Pol protein | 5.6e-66 | 60.78 | Show/hide |
Query: MELAAVVFALKIWRHYLYGEKIQIFSDHQSLKYFFTQKDLNMRQRRWLKLVKDYDCEILYHPGKANVVADALSRKTSHLATLANPKSIIRKDLERAEIAV
+ELAAVVFALKIWRHYLYGEKIQIF+DH+SLKYFFTQK+LNMRQRRWL+LV DYDCEILYHPGK NVVADALSRK +H A L ++ + +D ERAEIAV
Subjt: MELAAVVFALKIWRHYLYGEKIQIFSDHQSLKYFFTQKDLNMRQRRWLKLVKDYDCEILYHPGKANVVADALSRKTSHLATLANPKSIIRKDLERAEIAV
Query: LLGDVTAESSSIDHP-------AFDGGLRYKGRLCVPADAGIRSELLTEAHTSPFAWHPGGNKMYQDLKQTFWWMGMKREIAHLSVGVSLVGQVKAPRRK
+G+VT++ ++ + D GL ++GRLCVP D+ +++ELLTEA++SPF HPG KMYQDL+ +WW MKRE+A + QVKAPR++
Subjt: LLGDVTAESSSIDHP-------AFDGGLRYKGRLCVPADAGIRSELLTEAHTSPFAWHPGGNKMYQDLKQTFWWMGMKREIAHLSVGVSLVGQVKAPRRK
Query: TSEV
+E+
Subjt: TSEV
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| A0A5A7UIG2 Ty3-gypsy retrotransposon protein | 2.3e-67 | 64 | Show/hide |
Query: MELAAVVFALKIWRHYLYGEKIQIFSDHQSLKYFFTQKDLNMRQRRWLKLVKDYDCEILYHPGKANVVADALSRKTSHLATLANPKSIIRKDLERAEIAV
+EL AVVFALKIWRHYLYGEKIQIF+DH+SLKYFFTQK+LNMRQRRWL+LVKDYDCEILYHPGKANVVADALSRK SH A L ++ + +DLERAEIAV
Subjt: MELAAVVFALKIWRHYLYGEKIQIFSDHQSLKYFFTQKDLNMRQRRWLKLVKDYDCEILYHPGKANVVADALSRKTSHLATLANPKSIIRKDLERAEIAV
Query: LLGDVTAESSSID-------HPAFDGGLRYKGRLCVPADAGIRSELLTEAHTSPFAWHPGGNKMYQDLKQTFWWMGMKREIAHLSVGVSLVGQVKAPRRK
+G VT + + + + DGGL ++ RLCVP+D+ +++ELL+EAH+SPF+ HPG KMYQDLK+ +WW MKRE+A + QVKAPR+K
Subjt: LLGDVTAESSSID-------HPAFDGGLRYKGRLCVPADAGIRSELLTEAHTSPFAWHPGGNKMYQDLKQTFWWMGMKREIAHLSVGVSLVGQVKAPRRK
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| A0A5A7V6R2 Reverse transcriptase | 4.3e-66 | 50.38 | Show/hide |
Query: MELAAVVFALKIWRHYLYGEKIQIFSDHQSLKYFFTQKDLNMRQRRWLKLVKDYDCEILYHPGKANVVADALSRKTSHLATLANPKSIIRKDLERAEIAV
+ELAAVVFALKIWRHYLYGEKIQI++DH+SLKYFFTQK+LNMRQRRWL+LVKDYDCEILYHPGKANVVADALSRK +H A L ++ + +D ERAEIAV
Subjt: MELAAVVFALKIWRHYLYGEKIQIFSDHQSLKYFFTQKDLNMRQRRWLKLVKDYDCEILYHPGKANVVADALSRKTSHLATLANPKSIIRKDLERAEIAV
Query: LLGDVTAE---------------SSSIDHP-------------------AFDGGLRYKGRLCVPADAGIRSELLTEAHTSPFAWHPGGNKMYQDLKQTFW
+G+VTA+ ++ ++ P + D GL ++GRLCVP D +++ELLTEAH+SPF HPG KMYQDL+ +W
Subjt: LLGDVTAE---------------SSSIDHP-------------------AFDGGLRYKGRLCVPADAGIRSELLTEAHTSPFAWHPGGNKMYQDLKQTFW
Query: WMGMKREIAHLSVGVSLVGQVKAPRRKTSEVATDRSGCHGGSGRKLPWILFRDCPEPLEDMHADLG
W GMKR++A + QVKAPR+ + + S G + P+ + +H DLG
Subjt: WMGMKREIAHLSVGVSLVGQVKAPRRKTSEVATDRSGCHGGSGRKLPWILFRDCPEPLEDMHADLG
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| A0A5D3BG22 Pol protein | 8.6e-67 | 51.75 | Show/hide |
Query: MELAAVVFALKIWRHYLYGEKIQIFSDHQSLKYFFTQKDLNMRQRRWLKLVKDYDCEILYHPGKANVVADALSRKTSHLATLANPKSIIRKDLERAEIAV
+ELAAV+FALKIWRHYLYGEKIQIF+DH+SLKYFFTQ +LNMRQRRWL+LVKDY+CEILYHPGKANVVADALSRK +H ATL ++ + +DLERAEIAV
Subjt: MELAAVVFALKIWRHYLYGEKIQIFSDHQSLKYFFTQKDLNMRQRRWLKLVKDYDCEILYHPGKANVVADALSRKTSHLATLANPKSIIRKDLERAEIAV
Query: LLGDVTAE---------------SSSIDHP-------------------AFDGGLRYKGRLCVPADAGIRSELLTEAHTSPFAWHPGGNKMYQDLKQTFW
+G+VT++ + ++ P + D GL + GRLCVP D+ ++ ELL EA++SPFA HPG +MYQDL+ +W
Subjt: LLGDVTAE---------------SSSIDHP-------------------AFDGGLRYKGRLCVPADAGIRSELLTEAHTSPFAWHPGGNKMYQDLKQTFW
Query: WMGMKREIAHLSVGVSLVGQVKAPRRKTSEVATDRSGCHGGSGRKLPWILFRDCPEP
W MKRE+A + Q+KAPR++ C G+GR W RDCP P
Subjt: WMGMKREIAHLSVGVSLVGQVKAPRRKTSEVATDRSGCHGGSGRKLPWILFRDCPEP
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04323 Retrovirus-related Pol polyprotein from transposon 17.6 | 1.7e-11 | 47.95 | Show/hide |
Query: ELAAVVFALKIWRHYLYGEKIQIFSDHQSLKYFFTQKDLNMRQRRWLKLVKDYDCEILYHPGKANVVADALSR
EL A+V+A K +RHYL G +I SDHQ L + + KD N + RW + ++D +I Y GK N VADALSR
Subjt: ELAAVVFALKIWRHYLYGEKIQIFSDHQSLKYFFTQKDLNMRQRRWLKLVKDYDCEILYHPGKANVVADALSR
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| P0CT34 Transposon Tf2-1 polyprotein | 3.2e-10 | 28.06 | Show/hide |
Query: ELAAVVFALKIWRHYLYG--EKIQIFSDHQSLKYFFTQKD--LNMRQRRWLKLVKDYDCEILYHPGKANVVADALSR---KTSHLATLANPKSI------
E+ A++ +LK WRHYL E +I +DH++L T + N R RW ++D++ EI Y PG AN +ADALSR +T + + SI
Subjt: ELAAVVFALKIWRHYLYG--EKIQIFSDHQSLKYFFTQKD--LNMRQRRWLKLVKDYDCEILYHPGKANVVADALSR---KTSHLATLANPKSI------
Query: -IRKDLERAEI------AVLLGDVTAESSSIDH--PAFDGGL-RYKGRLCVPADAGIRSELLTEAHTSPFAWHPGGNKMYQDLKQTFWWMGMKREI
I D + + LL + E ++ DG L K ++ +P D + ++ + H HPG + + + F W G++++I
Subjt: -IRKDLERAEI------AVLLGDVTAESSSIDH--PAFDGGL-RYKGRLCVPADAGIRSELLTEAHTSPFAWHPGGNKMYQDLKQTFWWMGMKREI
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| P0CT41 Transposon Tf2-12 polyprotein | 3.2e-10 | 28.06 | Show/hide |
Query: ELAAVVFALKIWRHYLYG--EKIQIFSDHQSLKYFFTQKD--LNMRQRRWLKLVKDYDCEILYHPGKANVVADALSR---KTSHLATLANPKSI------
E+ A++ +LK WRHYL E +I +DH++L T + N R RW ++D++ EI Y PG AN +ADALSR +T + + SI
Subjt: ELAAVVFALKIWRHYLYG--EKIQIFSDHQSLKYFFTQKD--LNMRQRRWLKLVKDYDCEILYHPGKANVVADALSR---KTSHLATLANPKSI------
Query: -IRKDLERAEI------AVLLGDVTAESSSIDH--PAFDGGL-RYKGRLCVPADAGIRSELLTEAHTSPFAWHPGGNKMYQDLKQTFWWMGMKREI
I D + + LL + E ++ DG L K ++ +P D + ++ + H HPG + + + F W G++++I
Subjt: -IRKDLERAEI------AVLLGDVTAESSSIDH--PAFDGGL-RYKGRLCVPADAGIRSELLTEAHTSPFAWHPGGNKMYQDLKQTFWWMGMKREI
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| Q8I7P9 Retrovirus-related Pol polyprotein from transposon opus | 2.6e-12 | 40.66 | Show/hide |
Query: ELAAVVFALKIWRHYLYGE-KIQIFSDHQSLKYFFTQKDLNMRQRRWLKLVKDYDCEILYHPGKANVVADALSRKTSHLATL-----ANPK
E+ A++++L R YLYG I++++DHQ L + ++ N + +RW +++Y+CE++Y PGK+NVVADALSR L L ANP+
Subjt: ELAAVVFALKIWRHYLYGE-KIQIFSDHQSLKYFFTQKDLNMRQRRWLKLVKDYDCEILYHPGKANVVADALSRKTSHLATL-----ANPK
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| Q9UR07 Transposon Tf2-11 polyprotein | 3.2e-10 | 28.06 | Show/hide |
Query: ELAAVVFALKIWRHYLYG--EKIQIFSDHQSLKYFFTQKD--LNMRQRRWLKLVKDYDCEILYHPGKANVVADALSR---KTSHLATLANPKSI------
E+ A++ +LK WRHYL E +I +DH++L T + N R RW ++D++ EI Y PG AN +ADALSR +T + + SI
Subjt: ELAAVVFALKIWRHYLYG--EKIQIFSDHQSLKYFFTQKD--LNMRQRRWLKLVKDYDCEILYHPGKANVVADALSR---KTSHLATLANPKSI------
Query: -IRKDLERAEI------AVLLGDVTAESSSIDH--PAFDGGL-RYKGRLCVPADAGIRSELLTEAHTSPFAWHPGGNKMYQDLKQTFWWMGMKREI
I D + + LL + E ++ DG L K ++ +P D + ++ + H HPG + + + F W G++++I
Subjt: -IRKDLERAEI------AVLLGDVTAESSSIDH--PAFDGGL-RYKGRLCVPADAGIRSELLTEAHTSPFAWHPGGNKMYQDLKQTFWWMGMKREI
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