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Sed0027554 (gene) of Chayote v1 genome

Gene IDSed0027554
OrganismSechium edule (Chayote v1)
Descriptionprotein RALF-like 24
Genome locationLG12:2160657..2163439
RNA-Seq ExpressionSed0027554
SyntenySed0027554
Gene Ontology termsGO:0019722 - calcium-mediated signaling (biological process)
GO:0005576 - extracellular region (cellular component)
InterPro domainsIPR008801 - Rapid ALkalinization Factor


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6582492.1 Protein RALF-like 24, partial [Cucurbita argyrosperma subsp. sororia]7.6e-5383.2Show/hide
Query:  MAKPIFFFVLS----LIFLQTHFPFSQSILDLRSLKGNEIDLMAKGVCNQKIGECFTEPEMESETSRRVLLMQKKYISYDTLRRDMVPCSRPGVSYYECH
        M  P  FF+ S    L+FLQTHF F  +ILDLRSLKG+EID+MAKGVCNQKIGEC TEPEMESE SRRVL+MQKKYISYDTLRRDMVPCSRPGVSYYECH
Subjt:  MAKPIFFFVLS----LIFLQTHFPFSQSILDLRSLKGNEIDLMAKGVCNQKIGECFTEPEMESETSRRVLLMQKKYISYDTLRRDMVPCSRPGVSYYECH

Query:  SGPANSYDRGCEVITRCARDVHDIN
         GPANSYDRGCEVITRCARDVHDIN
Subjt:  SGPANSYDRGCEVITRCARDVHDIN

XP_008438316.1 PREDICTED: protein RALF-like 24 isoform X1 [Cucumis melo]1.4e-5179.53Show/hide
Query:  MAKPIFFF------VLSLIFLQTHFPFSQSILDLRSLKGNEIDLMAKGVCNQKIGECFTEPEMESETSRRVLLMQKKYISYDTLRRDMVPCSRPGVSYYE
        MAK +F F      +  L+FLQTHF F  +ILDLRS KG+E+D+MAKGVCNQKIGEC T+PEMESE SRRVL+MQKKYISYDTLRRDMVPCSRPGVSYYE
Subjt:  MAKPIFFF------VLSLIFLQTHFPFSQSILDLRSLKGNEIDLMAKGVCNQKIGECFTEPEMESETSRRVLLMQKKYISYDTLRRDMVPCSRPGVSYYE

Query:  CHSGPANSYDRGCEVITRCARDVHDIN
        CH GPANSYDRGCEVITRCARDVHDIN
Subjt:  CHSGPANSYDRGCEVITRCARDVHDIN

XP_022974738.1 protein RALF-like 24 [Cucurbita maxima]4.0e-5484Show/hide
Query:  MAKPIFFFVLS----LIFLQTHFPFSQSILDLRSLKGNEIDLMAKGVCNQKIGECFTEPEMESETSRRVLLMQKKYISYDTLRRDMVPCSRPGVSYYECH
        MAKP  FF+LS    LIFLQTHFPF  ++LDLRSLKGN+IDLM KGVCNQKIGEC TEP+MESE SRRVL+MQK+YISY+TLRRDMVPCSRPGVSYYECH
Subjt:  MAKPIFFFVLS----LIFLQTHFPFSQSILDLRSLKGNEIDLMAKGVCNQKIGECFTEPEMESETSRRVLLMQKKYISYDTLRRDMVPCSRPGVSYYECH

Query:  SGPANSYDRGCEVITRCARDVHDIN
         GPANSYDRGCEVITRCARDVHDIN
Subjt:  SGPANSYDRGCEVITRCARDVHDIN

XP_023526933.1 protein RALF-like 24 [Cucurbita pepo subsp. pepo]7.6e-5383.2Show/hide
Query:  MAKPIFFFVLS----LIFLQTHFPFSQSILDLRSLKGNEIDLMAKGVCNQKIGECFTEPEMESETSRRVLLMQKKYISYDTLRRDMVPCSRPGVSYYECH
        M  P  FF+ S    L+FLQTHF F  +ILDLRSLKG+EID+MAKGVCNQKIGEC TEPEMESE SRRVL+MQKKYISYDTLRRDMVPCSRPGVSYYECH
Subjt:  MAKPIFFFVLS----LIFLQTHFPFSQSILDLRSLKGNEIDLMAKGVCNQKIGECFTEPEMESETSRRVLLMQKKYISYDTLRRDMVPCSRPGVSYYECH

Query:  SGPANSYDRGCEVITRCARDVHDIN
         GPANSYDRGCEVITRCARDVHDIN
Subjt:  SGPANSYDRGCEVITRCARDVHDIN

XP_038875978.1 protein RALF-like 24 [Benincasa hispida]3.4e-5383.2Show/hide
Query:  MAKPIFFF----VLSLIFLQTHFPFSQSILDLRSLKGNEIDLMAKGVCNQKIGECFTEPEMESETSRRVLLMQKKYISYDTLRRDMVPCSRPGVSYYECH
        MA PI FF    +L L+FLQTHF F  +ILDLRS KG+E+DLMAKGVCNQKIGEC TEPEMESE SRRVL+MQKKYISYDTLRRDMVPCSRPGVSYYECH
Subjt:  MAKPIFFF----VLSLIFLQTHFPFSQSILDLRSLKGNEIDLMAKGVCNQKIGECFTEPEMESETSRRVLLMQKKYISYDTLRRDMVPCSRPGVSYYECH

Query:  SGPANSYDRGCEVITRCARDVHDIN
         GPANSYDRGCE+ITRCARDVHDIN
Subjt:  SGPANSYDRGCEVITRCARDVHDIN

TrEMBL top hitse value%identityAlignment
A0A0A0L7V8 Uncharacterized protein1.6e-5179.37Show/hide
Query:  MAKPIFFF-----VLSLIFLQTHFPFSQSILDLRSLKGNEIDLMAKGVCNQKIGECFTEPEMESETSRRVLLMQKKYISYDTLRRDMVPCSRPGVSYYEC
        MAK +F F     +  L+FLQTHF F  +ILDLRS KG+E+++MAKGVCNQKIGEC T+PEMESE SRRVL+MQKKYISYDTLRRDMVPCSRPGVSYYEC
Subjt:  MAKPIFFF-----VLSLIFLQTHFPFSQSILDLRSLKGNEIDLMAKGVCNQKIGECFTEPEMESETSRRVLLMQKKYISYDTLRRDMVPCSRPGVSYYEC

Query:  HSGPANSYDRGCEVITRCARDVHDIN
        H GPANSYDRGCEVITRCARDVHDIN
Subjt:  HSGPANSYDRGCEVITRCARDVHDIN

A0A1S3AWQ1 protein RALF-like 24 isoform X17.0e-5279.53Show/hide
Query:  MAKPIFFF------VLSLIFLQTHFPFSQSILDLRSLKGNEIDLMAKGVCNQKIGECFTEPEMESETSRRVLLMQKKYISYDTLRRDMVPCSRPGVSYYE
        MAK +F F      +  L+FLQTHF F  +ILDLRS KG+E+D+MAKGVCNQKIGEC T+PEMESE SRRVL+MQKKYISYDTLRRDMVPCSRPGVSYYE
Subjt:  MAKPIFFF------VLSLIFLQTHFPFSQSILDLRSLKGNEIDLMAKGVCNQKIGECFTEPEMESETSRRVLLMQKKYISYDTLRRDMVPCSRPGVSYYE

Query:  CHSGPANSYDRGCEVITRCARDVHDIN
        CH GPANSYDRGCEVITRCARDVHDIN
Subjt:  CHSGPANSYDRGCEVITRCARDVHDIN

A0A5D3CZU4 Protein RALF-like 24 isoform X17.0e-5279.53Show/hide
Query:  MAKPIFFF------VLSLIFLQTHFPFSQSILDLRSLKGNEIDLMAKGVCNQKIGECFTEPEMESETSRRVLLMQKKYISYDTLRRDMVPCSRPGVSYYE
        MAK +F F      +  L+FLQTHF F  +ILDLRS KG+E+D+MAKGVCNQKIGEC T+PEMESE SRRVL+MQKKYISYDTLRRDMVPCSRPGVSYYE
Subjt:  MAKPIFFF------VLSLIFLQTHFPFSQSILDLRSLKGNEIDLMAKGVCNQKIGECFTEPEMESETSRRVLLMQKKYISYDTLRRDMVPCSRPGVSYYE

Query:  CHSGPANSYDRGCEVITRCARDVHDIN
        CH GPANSYDRGCEVITRCARDVHDIN
Subjt:  CHSGPANSYDRGCEVITRCARDVHDIN

A0A6J1D019 protein RALF-like 24 isoform X19.1e-5280Show/hide
Query:  MAKP----IFFFVLSLIFLQTHFPFSQSILDLRSLKGNEIDLMAKGVCNQKIGECFTEPEMESETSRRVLLMQKKYISYDTLRRDMVPCSRPGVSYYECH
        MAKP    +   +L+++F  THF F  +ILDLRSLKG++ID+MAKGVCNQKIGEC TEPEMESETSRRVL+MQKKYISYDTL+RDMVPC+RPGVSYYECH
Subjt:  MAKP----IFFFVLSLIFLQTHFPFSQSILDLRSLKGNEIDLMAKGVCNQKIGECFTEPEMESETSRRVLLMQKKYISYDTLRRDMVPCSRPGVSYYECH

Query:  SGPANSYDRGCEVITRCARDVHDIN
        SGPANSYDRGCEVITRCARDVHDIN
Subjt:  SGPANSYDRGCEVITRCARDVHDIN

A0A6J1IH73 protein RALF-like 242.0e-5484Show/hide
Query:  MAKPIFFFVLS----LIFLQTHFPFSQSILDLRSLKGNEIDLMAKGVCNQKIGECFTEPEMESETSRRVLLMQKKYISYDTLRRDMVPCSRPGVSYYECH
        MAKP  FF+LS    LIFLQTHFPF  ++LDLRSLKGN+IDLM KGVCNQKIGEC TEP+MESE SRRVL+MQK+YISY+TLRRDMVPCSRPGVSYYECH
Subjt:  MAKPIFFFVLS----LIFLQTHFPFSQSILDLRSLKGNEIDLMAKGVCNQKIGECFTEPEMESETSRRVLLMQKKYISYDTLRRDMVPCSRPGVSYYECH

Query:  SGPANSYDRGCEVITRCARDVHDIN
         GPANSYDRGCEVITRCARDVHDIN
Subjt:  SGPANSYDRGCEVITRCARDVHDIN

SwissProt top hitse value%identityAlignment
Q2HIM9 Protein RALF-like 311.0e-2351.28Show/hide
Query:  IFFFVLSLIFLQTHFPFSQSILDLRSLKGNEIDLMAKGVCNQKIGECFTEPEMESETSRRVLLMQKKYISYDTLRRDMVPCSRPGVSYYECHSGPANSYD
        + F +L L+     FP              EID M   + N  IGE   E  M +E SRRVL+ QK+YI Y+TLRRDMVPC +PG SYY+C SG ANSY 
Subjt:  IFFFVLSLIFLQTHFPFSQSILDLRSLKGNEIDLMAKGVCNQKIGECFTEPEMESETSRRVLLMQKKYISYDTLRRDMVPCSRPGVSYYECHSGPANSYD

Query:  RGCEVITRCARDVHDIN
        RGC+ ITRCARD +DIN
Subjt:  RGCEVITRCARDVHDIN

Q8L9P8 Protein RALF-like 333.3e-1442.86Show/hide
Query:  KPIFFFVLSLIFLQTHFPFSQSILDLRSLKGNEIDLMAKGVCNQKIGECF-----TEPEMESETSRRVLLMQKKYISYDTLRRDMVPCSRPGVSYYECHS
        KP+    + +  L  HF F+          G+ + + +K  CN  I EC       E EM+SE +RR+ L   KYISY  LRR+ VPCSR G SYY C  
Subjt:  KPIFFFVLSLIFLQTHFPFSQSILDLRSLKGNEIDLMAKGVCNQKIGECF-----TEPEMESETSRRVLLMQKKYISYDTLRRDMVPCSRPGVSYYECHS

Query:  G-PANSYDRGCEVITRCAR
        G  AN Y RGC  ITRC R
Subjt:  G-PANSYDRGCEVITRCAR

Q945T0 Rapid alkalinization factor1.1e-1453.95Show/hide
Query:  GVCNQKIGECFTEP---EMESETSRRVLLMQKKYISYDTLRRDMVPCSRPGVSYYECHSG-PANSYDRGCEVITRC
        G C   IGEC  E    E++SE++RR+ L  KKYISY  L+++ VPCSR G SYY C  G  AN Y RGC  ITRC
Subjt:  GVCNQKIGECFTEP---EMESETSRRVLLMQKKYISYDTLRRDMVPCSRPGVSYYECHSG-PANSYDRGCEVITRC

Q9LK37 Protein RALF-like 245.7e-2755Show/hide
Query:  MAKPIFFFVLSLIFLQTHFPFSQSILDLRSLKGNEIDLMAKGVCNQKIGECFTEPEMESETSRRVLLMQKKYISYDTLRRDMVPCSRPGVSYYECHSGPA
        M++ +    LSL+ LQTH   S ++  + S+ G EID M     N  IGE   E  M SE SRRV++M+K+YISY+TLRRDMVPC +PG SYY C SG A
Subjt:  MAKPIFFFVLSLIFLQTHFPFSQSILDLRSLKGNEIDLMAKGVCNQKIGECFTEPEMESETSRRVLLMQKKYISYDTLRRDMVPCSRPGVSYYECHSGPA

Query:  NSYDRGCEVITRCARDVHDI
        N+Y+RGC VITRCARD +DI
Subjt:  NSYDRGCEVITRCARDVHDI

Q9MA62 Protein RALF-like 222.3e-1548.39Show/hide
Query:  GNEIDLMAKGV------CNQKIGECFTEP---EMESETSRRVLLMQKKYISYDTLRRDMVPCSRPGVSYYECHSG-PANSYDRGCEVITRCAR
        G+ +D +  G       C   I EC  E    E +S+ SRR+ L QKKYISY  +RR+ VPCSR G SYY C  G  AN Y RGC  ITRC R
Subjt:  GNEIDLMAKGV------CNQKIGECFTEP---EMESETSRRVLLMQKKYISYDTLRRDMVPCSRPGVSYYECHSG-PANSYDRGCEVITRCAR

Arabidopsis top hitse value%identityAlignment
AT3G05490.1 ralf-like 221.6e-1648.39Show/hide
Query:  GNEIDLMAKGV------CNQKIGECFTEP---EMESETSRRVLLMQKKYISYDTLRRDMVPCSRPGVSYYECHSG-PANSYDRGCEVITRCAR
        G+ +D +  G       C   I EC  E    E +S+ SRR+ L QKKYISY  +RR+ VPCSR G SYY C  G  AN Y RGC  ITRC R
Subjt:  GNEIDLMAKGV------CNQKIGECFTEP---EMESETSRRVLLMQKKYISYDTLRRDMVPCSRPGVSYYECHSG-PANSYDRGCEVITRCAR

AT3G16570.1 rapid alkalinization factor 231.5e-1455.88Show/hide
Query:  GECFTEPEMESETSRRVLLMQKKYISYDTLRRDMVPCSRPGVSYYECHSG-PANSYDRGCEVITRCAR
        GE   E EM+SE +RR+ L  ++YISY  LRR+ +PCSR G SYY C  G  AN Y RGC  ITRC R
Subjt:  GECFTEPEMESETSRRVLLMQKKYISYDTLRRDMVPCSRPGVSYYECHSG-PANSYDRGCEVITRCAR

AT3G23805.1 ralf-like 244.1e-2855Show/hide
Query:  MAKPIFFFVLSLIFLQTHFPFSQSILDLRSLKGNEIDLMAKGVCNQKIGECFTEPEMESETSRRVLLMQKKYISYDTLRRDMVPCSRPGVSYYECHSGPA
        M++ +    LSL+ LQTH   S ++  + S+ G EID M     N  IGE   E  M SE SRRV++M+K+YISY+TLRRDMVPC +PG SYY C SG A
Subjt:  MAKPIFFFVLSLIFLQTHFPFSQSILDLRSLKGNEIDLMAKGVCNQKIGECFTEPEMESETSRRVLLMQKKYISYDTLRRDMVPCSRPGVSYYECHSGPA

Query:  NSYDRGCEVITRCARDVHDI
        N+Y+RGC VITRCARD +DI
Subjt:  NSYDRGCEVITRCARDVHDI

AT4G13950.1 ralf-like 317.2e-2551.28Show/hide
Query:  IFFFVLSLIFLQTHFPFSQSILDLRSLKGNEIDLMAKGVCNQKIGECFTEPEMESETSRRVLLMQKKYISYDTLRRDMVPCSRPGVSYYECHSGPANSYD
        + F +L L+     FP              EID M   + N  IGE   E  M +E SRRVL+ QK+YI Y+TLRRDMVPC +PG SYY+C SG ANSY 
Subjt:  IFFFVLSLIFLQTHFPFSQSILDLRSLKGNEIDLMAKGVCNQKIGECFTEPEMESETSRRVLLMQKKYISYDTLRRDMVPCSRPGVSYYECHSGPANSYD

Query:  RGCEVITRCARDVHDIN
        RGC+ ITRCARD +DIN
Subjt:  RGCEVITRCARDVHDIN

AT4G15800.1 ralf-like 332.3e-1542.86Show/hide
Query:  KPIFFFVLSLIFLQTHFPFSQSILDLRSLKGNEIDLMAKGVCNQKIGECF-----TEPEMESETSRRVLLMQKKYISYDTLRRDMVPCSRPGVSYYECHS
        KP+    + +  L  HF F+          G+ + + +K  CN  I EC       E EM+SE +RR+ L   KYISY  LRR+ VPCSR G SYY C  
Subjt:  KPIFFFVLSLIFLQTHFPFSQSILDLRSLKGNEIDLMAKGVCNQKIGECF-----TEPEMESETSRRVLLMQKKYISYDTLRRDMVPCSRPGVSYYECHS

Query:  G-PANSYDRGCEVITRCAR
        G  AN Y RGC  ITRC R
Subjt:  G-PANSYDRGCEVITRCAR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAAACCCATTTTCTTCTTCGTTCTCTCACTCATTTTCCTTCAAACCCATTTCCCATTTTCCCAATCGATTCTGGATCTCAGATCTTTGAAGGGCAACGAAATCGA
TTTAATGGCAAAAGGGGTTTGCAATCAGAAGATTGGGGAGTGTTTTACAGAGCCAGAAATGGAATCTGAAACCAGTAGAAGGGTTTTGCTGATGCAGAAGAAGTATATAA
GCTATGACACTCTTAGAAGGGACATGGTTCCTTGTTCAAGGCCTGGGGTTTCTTATTATGAATGCCATTCTGGTCCTGCAAATTCTTATGATAGAGGCTGTGAGGTTATT
ACTAGATGTGCTAGAGATGTGCACGACATTAATGATTGA
mRNA sequenceShow/hide mRNA sequence
GTTTAAATGCCAAAAGTCATATGCAAAATTCTCTTGTGTGTGAATTGAGAGGAGTAATTGGCAAATGGATTACAACCAACTATTTTTGATAGAGAAAGGTTCCATATTAA
TTTCAAATTTTATGAGGTTTTCCATTCAATTAGTGTAAAGACAGAGACCAAAATCATCCCATTTGTAAACAACATCCAACCAATAAAAAAAATCTCTCACATTCAGAGCC
CATATTGCTGGAGAAGAACACGAAAATCACTGAACCTTCAAAATGGCAAAACCCATTTTCTTCTTCGTTCTCTCACTCATTTTCCTTCAAACCCATTTCCCATTTTCCCA
ATCGATTCTGGATCTCAGATCTTTGAAGGGCAACGAAATCGATTTAATGGCAAAAGGGGTTTGCAATCAGAAGATTGGGGAGTGTTTTACAGAGCCAGAAATGGAATCTG
AAACCAGTAGAAGGGTTTTGCTGATGCAGAAGAAGTATATAAGCTATGACACTCTTAGAAGGGACATGGTTCCTTGTTCAAGGCCTGGGGTTTCTTATTATGAATGCCAT
TCTGGTCCTGCAAATTCTTATGATAGAGGCTGTGAGGTTATTACTAGATGTGCTAGAGATGTGCACGACATTAATGATTGAAGATTTTGAGCTAGTTGCTGGCAGCCGTT
CGACTGTTGCGCCGTAAGCAGGCATCGACCAAGAGGTTGTTGTTCATTGATATTGAGCAAGAACATTTGTGTGCTTTTGTAAAAAGTTAGTGTTGAATATTATGATAACT
TGAACAATTTATGTTATGTTATCACTTCATTTGAAATGGAATTGCATTTGAACACCACATTCTAGTGGA
Protein sequenceShow/hide protein sequence
MAKPIFFFVLSLIFLQTHFPFSQSILDLRSLKGNEIDLMAKGVCNQKIGECFTEPEMESETSRRVLLMQKKYISYDTLRRDMVPCSRPGVSYYECHSGPANSYDRGCEVI
TRCARDVHDIND