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Sed0027558 (gene) of Chayote v1 genome

Gene IDSed0027558
OrganismSechium edule (Chayote v1)
Descriptionprotein BIC2
Genome locationLG01:57727102..57729043
RNA-Seq ExpressionSed0027558
SyntenySed0027558
Gene Ontology termsGO:0009785 - blue light signaling pathway (biological process)
InterPro domainsIPR040374 - Protein BIC


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7010351.1 60S ribosomal protein L10a, partial [Cucurbita argyrosperma subsp. argyrosperma]1.1e-2162.96Show/hide
Query:  MTPSNCSDS-ETISTA--------------GDSNSG-------CEVRERLKRHREEVAGKVTVPETWGKEELLKDWIDYSAFDRILAAGKIVAARASLAA
        M P N SDS + +ST               GDS+ G       C  RERLKRHREEVAGKVTVPE WGKEELLKDWIDYSAFDRILAAG+I +ARASL A
Subjt:  MTPSNCSDS-ETISTA--------------GDSNSG-------CEVRERLKRHREEVAGKVTVPETWGKEELLKDWIDYSAFDRILAAGKIVAARASLAA

Query:  EGRRPSSR
        EGRR  SR
Subjt:  EGRRPSSR

KAG7035940.1 60S ribosomal protein L10a, partial [Cucurbita argyrosperma subsp. argyrosperma]7.8e-2380.26Show/hide
Query:  CEVRERLKRHREEVAGKVTVPETWGKEELLKDWIDYSAFDRILAAGKIVAARASLAAEGRRPSSRSRSRPPLRVES
        C VRERLKRH EEVAGKV VPE WGKEELLKDWIDYS FDRIL A +I +ARASL AEGRR S RS SR PLRVES
Subjt:  CEVRERLKRHREEVAGKVTVPETWGKEELLKDWIDYSAFDRILAAGKIVAARASLAAEGRRPSSRSRSRPPLRVES

TYK18920.1 uncharacterized protein E5676_scaffold28061G00010 [Cucumis melo var. makuwa]3.9e-2266.67Show/hide
Query:  TPSNCSDSETISTAGDS--NSGCEVRERLKRHREEVAGKVTVPETWGKEELLKDWIDYSAFDRILAAGKIVAARASLAAEGRRPSSRSRSRPPLRVESR
        +P+  S  ++ ST G       C VRERLKRHREEVAGKVTVPE WGKEELLKDWIDYSAFDRILAAG+I +ARASLAAEG++  SR       RVESR
Subjt:  TPSNCSDSETISTAGDS--NSGCEVRERLKRHREEVAGKVTVPETWGKEELLKDWIDYSAFDRILAAGKIVAARASLAAEGRRPSSRSRSRPPLRVESR

XP_008458586.1 PREDICTED: uncharacterized protein LOC103497945 [Cucumis melo]8.7e-2265.66Show/hide
Query:  TPSNCSDSETISTAGDS--NSGCEVRERLKRHREEVAGKVTVPETWGKEELLKDWIDYSAFDRILAAGKIVAARASLAAEGRRPSSRSRSRPPLRVESR
        +P+  S  ++ ST G       C VRERLKRHREEVAGKVTVP+ WGKEELLKDWIDYSAFDRILAAG+I +ARASLAAEG++  SR       RVESR
Subjt:  TPSNCSDSETISTAGDS--NSGCEVRERLKRHREEVAGKVTVPETWGKEELLKDWIDYSAFDRILAAGKIVAARASLAAEGRRPSSRSRSRPPLRVESR

XP_022153004.1 protein BIC2 [Momordica charantia]1.9e-2481.48Show/hide
Query:  SNSGCEVRERLKRHREEVAGKVTVPETWGKEELLKDWIDYSAFDRILAAGKIVAARASLAAEGRRPSSRSRSRPPLRVESR
        S S C VRERLKRHREEVAGKVTVPE WGKEELLKDWIDYSAFDRILAA +I  ARASLAAEGRR ++   SRP LRVESR
Subjt:  SNSGCEVRERLKRHREEVAGKVTVPETWGKEELLKDWIDYSAFDRILAAGKIVAARASLAAEGRRPSSRSRSRPPLRVESR

TrEMBL top hitse value%identityAlignment
A0A0A0KBS7 Uncharacterized protein1.0e-2068Show/hide
Query:  PSNCSDSETISTAG---DSNSGC-EVRERLKRHREEVAGKVTVPETWGKEELLKDWIDYSAFDRILAAGKIVAARASLAAEGRRPSSRSRSRPPLRVESR
        PS    S   S+ G   +   GC  VRERLKRHREEVAGKV VPE WGKEELLKDWIDYSAFDRILAAG+I +ARASLAAEG+R S RS      RVESR
Subjt:  PSNCSDSETISTAG---DSNSGC-EVRERLKRHREEVAGKVTVPETWGKEELLKDWIDYSAFDRILAAGKIVAARASLAAEGRRPSSRSRSRPPLRVESR

A0A1S3C9F3 uncharacterized protein LOC1034979454.2e-2265.66Show/hide
Query:  TPSNCSDSETISTAGDS--NSGCEVRERLKRHREEVAGKVTVPETWGKEELLKDWIDYSAFDRILAAGKIVAARASLAAEGRRPSSRSRSRPPLRVESR
        +P+  S  ++ ST G       C VRERLKRHREEVAGKVTVP+ WGKEELLKDWIDYSAFDRILAAG+I +ARASLAAEG++  SR       RVESR
Subjt:  TPSNCSDSETISTAGDS--NSGCEVRERLKRHREEVAGKVTVPETWGKEELLKDWIDYSAFDRILAAGKIVAARASLAAEGRRPSSRSRSRPPLRVESR

A0A5A7STT7 Uncharacterized protein4.2e-2265.66Show/hide
Query:  TPSNCSDSETISTAGDS--NSGCEVRERLKRHREEVAGKVTVPETWGKEELLKDWIDYSAFDRILAAGKIVAARASLAAEGRRPSSRSRSRPPLRVESR
        +P+  S  ++ ST G       C VRERLKRHREEVAGKVTVP+ WGKEELLKDWIDYSAFDRILAAG+I +ARASLAAEG++  SR       RVESR
Subjt:  TPSNCSDSETISTAGDS--NSGCEVRERLKRHREEVAGKVTVPETWGKEELLKDWIDYSAFDRILAAGKIVAARASLAAEGRRPSSRSRSRPPLRVESR

A0A5D3D5X1 Uncharacterized protein1.9e-2266.67Show/hide
Query:  TPSNCSDSETISTAGDS--NSGCEVRERLKRHREEVAGKVTVPETWGKEELLKDWIDYSAFDRILAAGKIVAARASLAAEGRRPSSRSRSRPPLRVESR
        +P+  S  ++ ST G       C VRERLKRHREEVAGKVTVPE WGKEELLKDWIDYSAFDRILAAG+I +ARASLAAEG++  SR       RVESR
Subjt:  TPSNCSDSETISTAGDS--NSGCEVRERLKRHREEVAGKVTVPETWGKEELLKDWIDYSAFDRILAAGKIVAARASLAAEGRRPSSRSRSRPPLRVESR

A0A6J1DHR5 protein BIC29.0e-2581.48Show/hide
Query:  SNSGCEVRERLKRHREEVAGKVTVPETWGKEELLKDWIDYSAFDRILAAGKIVAARASLAAEGRRPSSRSRSRPPLRVESR
        S S C VRERLKRHREEVAGKVTVPE WGKEELLKDWIDYSAFDRILAA +I  ARASLAAEGRR ++   SRP LRVESR
Subjt:  SNSGCEVRERLKRHREEVAGKVTVPETWGKEELLKDWIDYSAFDRILAAGKIVAARASLAAEGRRPSSRSRSRPPLRVESR

SwissProt top hitse value%identityAlignment
Q9LXJ1 Protein BIC11.5e-1358.73Show/hide
Query:  RERLKRHREEVAGKVTVPETWGKEELLKDWIDYSAFDRILAAGKIVAARASLAAEGRRPSSRS
        RERLK+HR E+AG+V +PE WG+EELLKDWID S FD  L    I +AR +L  E RR +S S
Subjt:  RERLKRHREEVAGKVTVPETWGKEELLKDWIDYSAFDRILAAGKIVAARASLAAEGRRPSSRS

Q9M280 Protein BIC26.9e-1455.41Show/hide
Query:  RERLKRHREEVAGKVTVPETWGKEELLKDWIDYSAFDRILAAGKIVAARASLAAEGRRPSSRSRSRPP-LRVES
        R+RLKRHREEVAGKV +P++WGKE LL  W+D+S FD    + +IV+ARA+L A+    +    SRP  LRVES
Subjt:  RERLKRHREEVAGKVTVPETWGKEELLKDWIDYSAFDRILAAGKIVAARASLAAEGRRPSSRSRSRPP-LRVES

Arabidopsis top hitse value%identityAlignment
AT3G44450.1 unknown protein4.9e-1555.41Show/hide
Query:  RERLKRHREEVAGKVTVPETWGKEELLKDWIDYSAFDRILAAGKIVAARASLAAEGRRPSSRSRSRPP-LRVES
        R+RLKRHREEVAGKV +P++WGKE LL  W+D+S FD    + +IV+ARA+L A+    +    SRP  LRVES
Subjt:  RERLKRHREEVAGKVTVPETWGKEELLKDWIDYSAFDRILAAGKIVAARASLAAEGRRPSSRSRSRPP-LRVES

AT3G52740.1 unknown protein1.1e-1458.73Show/hide
Query:  RERLKRHREEVAGKVTVPETWGKEELLKDWIDYSAFDRILAAGKIVAARASLAAEGRRPSSRS
        RERLK+HR E+AG+V +PE WG+EELLKDWID S FD  L    I +AR +L  E RR +S S
Subjt:  RERLKRHREEVAGKVTVPETWGKEELLKDWIDYSAFDRILAAGKIVAARASLAAEGRRPSSRS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTCCTTCAAATTGCTCTGATTCCGAAACAATCAGCACCGCCGGAGATTCAAATAGCGGTTGTGAGGTCCGAGAGCGGCTGAAGAGGCACCGTGAGGAGGTGGCCGG
AAAAGTGACGGTGCCGGAGACATGGGGGAAAGAGGAGCTGCTAAAGGATTGGATTGACTACTCGGCGTTCGACAGAATCTTGGCTGCCGGGAAAATTGTGGCGGCGAGGG
CGTCGCTTGCGGCGGAGGGGCGGCGGCCCTCTTCCCGATCCCGATCTCGGCCACCGCTGAGGGTAGAAAGTAGAATGCAAGAACTTACACGAAAAAACTCTCAAGTTAGA
GGAAAAAAACTATGGACATAA
mRNA sequenceShow/hide mRNA sequence
ATGACTCCTTCAAATTGCTCTGATTCCGAAACAATCAGCACCGCCGGAGATTCAAATAGCGGTTGTGAGGTCCGAGAGCGGCTGAAGAGGCACCGTGAGGAGGTGGCCGG
AAAAGTGACGGTGCCGGAGACATGGGGGAAAGAGGAGCTGCTAAAGGATTGGATTGACTACTCGGCGTTCGACAGAATCTTGGCTGCCGGGAAAATTGTGGCGGCGAGGG
CGTCGCTTGCGGCGGAGGGGCGGCGGCCCTCTTCCCGATCCCGATCTCGGCCACCGCTGAGGGTAGAAAGTAGAATGCAAGAACTTACACGAAAAAACTCTCAAGTTAGA
GGAAAAAAACTATGGACATAA
Protein sequenceShow/hide protein sequence
MTPSNCSDSETISTAGDSNSGCEVRERLKRHREEVAGKVTVPETWGKEELLKDWIDYSAFDRILAAGKIVAARASLAAEGRRPSSRSRSRPPLRVESRMQELTRKNSQVR
GKKLWT