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Sed0027560 (gene) of Chayote v1 genome

Gene IDSed0027560
OrganismSechium edule (Chayote v1)
Descriptionctenidin-3-like
Genome locationLG10:1965836..1966818
RNA-Seq ExpressionSed0027560
SyntenySed0027560
Gene Ontology termsGO:0007218 - neuropeptide signaling pathway (biological process)
GO:0046854 - phosphatidylinositol phosphorylation (biological process)
GO:0046855 - inositol phosphate dephosphorylation (biological process)
GO:0004386 - helicase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004134728.1 ctenidin-3 [Cucumis sativus]4.4e-5179.7Show/hide
Query:  MNRSTLLSTFLVAVLL------TLAAGGGPGYDGMFGPGSGFGDIPGFGKGWDKGIIGGGYGGGYGGPKGGYGKGGIIRNTVLCKEKGPCYNKKVTCPAK
        MN    +  FL+A+LL         A    G+DGMFGPG+GFGDIPGFGKGWDKGIIGGGYGGGYGGPKGGYGKGGIIRN+V+CK KGPCYNKKVTCPAK
Subjt:  MNRSTLLSTFLVAVLL------TLAAGGGPGYDGMFGPGSGFGDIPGFGKGWDKGIIGGGYGGGYGGPKGGYGKGGIIRNTVLCKEKGPCYNKKVTCPAK

Query:  CFSSYSRSGKGYGGGGGGGGCTIDCTKKCIGYC
        CFSSYSRSGKGYGGGGGGGGCTIDCTKKCIGYC
Subjt:  CFSSYSRSGKGYGGGGGGGGCTIDCTKKCIGYC

XP_022926656.1 neuropeptide-like protein 31 [Cucurbita moschata]8.5e-5582.96Show/hide
Query:  MNRSTLLSTFLVAVLL--------TLAAGGGPGYDGMFGPGSGFGDIPGFGKGWDKGIIGGGYGGGYGGPKGGYGKGGIIRNTVLCKEKGPCYNKKVTCP
        MNR   +ST LVAVLL        T    GG G+DGMFGPG+GF DIPGFGKGWDKGIIGGGYGGGYGGPKGGYGKGGIIRNTV+CKEKGPCYNKKVTCP
Subjt:  MNRSTLLSTFLVAVLL--------TLAAGGGPGYDGMFGPGSGFGDIPGFGKGWDKGIIGGGYGGGYGGPKGGYGKGGIIRNTVLCKEKGPCYNKKVTCP

Query:  AKCFSSYSRSGKGYGGGGGGGGCTIDCTKKCIGYC
        AKCFSSYSRSGKG+GGGGGGGGCTIDCTKKCIGYC
Subjt:  AKCFSSYSRSGKGYGGGGGGGGCTIDCTKKCIGYC

XP_023003427.1 eggshell protein-like [Cucurbita maxima]1.4e-5281.2Show/hide
Query:  MNRSTLLSTFLVAVLLT------LAAGGGPGYDGMFGPGSGFGDIPGFGKGWDKGIIGGGYGGGYGGPKGGYGKGGIIRNTVLCKEKGPCYNKKVTCPAK
        MNR   +ST LV  LL+       A   G G+DGMF PG+GF DIPGFGKGWDKGIIGGGYGGGYGGPKGGYGKGGIIRNTV+CKEKGPCYNKKVTCPAK
Subjt:  MNRSTLLSTFLVAVLLT------LAAGGGPGYDGMFGPGSGFGDIPGFGKGWDKGIIGGGYGGGYGGPKGGYGKGGIIRNTVLCKEKGPCYNKKVTCPAK

Query:  CFSSYSRSGKGYGGGGGGGGCTIDCTKKCIGYC
        CFSSYSRSGKG+GGGGGGGGCTIDCTKKCIGYC
Subjt:  CFSSYSRSGKGYGGGGGGGGCTIDCTKKCIGYC

XP_023517828.1 cold shock domain-containing protein 4-like [Cucurbita pepo subsp. pepo]3.2e-5482.22Show/hide
Query:  MNRSTLLSTFLVAVLL--------TLAAGGGPGYDGMFGPGSGFGDIPGFGKGWDKGIIGGGYGGGYGGPKGGYGKGGIIRNTVLCKEKGPCYNKKVTCP
        MNR   +S  LVAVLL        T    GG G+DGMFGPG+GF DIPGFGKGWDKGIIGGGYGGGYGGPKGGYGKGGIIRNTV+CKEKGPCYNKKVTCP
Subjt:  MNRSTLLSTFLVAVLL--------TLAAGGGPGYDGMFGPGSGFGDIPGFGKGWDKGIIGGGYGGGYGGPKGGYGKGGIIRNTVLCKEKGPCYNKKVTCP

Query:  AKCFSSYSRSGKGYGGGGGGGGCTIDCTKKCIGYC
        AKCFSSYSRSGKG+GGGGGGGGCTIDCTKKCIGYC
Subjt:  AKCFSSYSRSGKGYGGGGGGGGCTIDCTKKCIGYC

XP_023543509.1 ATP-dependent RNA helicase A [Cucurbita pepo subsp. pepo]2.6e-4880.31Show/hide
Query:  MNRSTLLSTFLVAVLLTLAAGGGPGYDGMFGPGSGFGDIPGFGKGWDKGIIGGGYGGGYGGPKGGYGKGGIIRNTVLCKEKGPCYNKKVTCPAKCFSSYS
        MN S L+S  L+AVLL   +       GMF PG GF DIPGF KGWDKGI+GGGYGGGYGGPKGGYGKGGIIRNTV+CKEKGPCYNKKVTCPAKCFSSYS
Subjt:  MNRSTLLSTFLVAVLLTLAAGGGPGYDGMFGPGSGFGDIPGFGKGWDKGIIGGGYGGGYGGPKGGYGKGGIIRNTVLCKEKGPCYNKKVTCPAKCFSSYS

Query:  RSGKGYGGGGGGGGCTIDCTKKCIGYC
        RSGKG+GGGGGGGGCTIDC+KKCIGYC
Subjt:  RSGKGYGGGGGGGGCTIDCTKKCIGYC

TrEMBL top hitse value%identityAlignment
A0A0A0KHJ2 Uncharacterized protein2.1e-5179.7Show/hide
Query:  MNRSTLLSTFLVAVLL------TLAAGGGPGYDGMFGPGSGFGDIPGFGKGWDKGIIGGGYGGGYGGPKGGYGKGGIIRNTVLCKEKGPCYNKKVTCPAK
        MN    +  FL+A+LL         A    G+DGMFGPG+GFGDIPGFGKGWDKGIIGGGYGGGYGGPKGGYGKGGIIRN+V+CK KGPCYNKKVTCPAK
Subjt:  MNRSTLLSTFLVAVLL------TLAAGGGPGYDGMFGPGSGFGDIPGFGKGWDKGIIGGGYGGGYGGPKGGYGKGGIIRNTVLCKEKGPCYNKKVTCPAK

Query:  CFSSYSRSGKGYGGGGGGGGCTIDCTKKCIGYC
        CFSSYSRSGKGYGGGGGGGGCTIDCTKKCIGYC
Subjt:  CFSSYSRSGKGYGGGGGGGGCTIDCTKKCIGYC

A0A1S3AZW7 ctenidin-3-like3.7e-4876.69Show/hide
Query:  MNRSTLLSTFLVAVL-----LTLAAG-GGPGYDGMFGPGSGFGDIPGFGKGWDKGIIGGGYGGGYGGPKGGYGKGGIIRNTVLCKEKGPCYNKKVTCPAK
        MN    +  FL+A+L     L+LA      G+ GMFGPG+GF DIPGFGKGWDKGI+GGGYGGGYGGPKGGYGKGGIIR  V+CKEKGPC+NKKVTCPAK
Subjt:  MNRSTLLSTFLVAVL-----LTLAAG-GGPGYDGMFGPGSGFGDIPGFGKGWDKGIIGGGYGGGYGGPKGGYGKGGIIRNTVLCKEKGPCYNKKVTCPAK

Query:  CFSSYSRSGKGYGGGGGGGGCTIDCTKKCIGYC
        CFSSYSRSGKGYGGGGGGGGCTIDC KKCIGYC
Subjt:  CFSSYSRSGKGYGGGGGGGGCTIDCTKKCIGYC

A0A5A7UGS4 Ctenidin-3-like3.7e-4876.69Show/hide
Query:  MNRSTLLSTFLVAVL-----LTLAAG-GGPGYDGMFGPGSGFGDIPGFGKGWDKGIIGGGYGGGYGGPKGGYGKGGIIRNTVLCKEKGPCYNKKVTCPAK
        MN    +  FL+A+L     L+LA      G+ GMFGPG+GF DIPGFGKGWDKGI+GGGYGGGYGGPKGGYGKGGIIR  V+CKEKGPC+NKKVTCPAK
Subjt:  MNRSTLLSTFLVAVL-----LTLAAG-GGPGYDGMFGPGSGFGDIPGFGKGWDKGIIGGGYGGGYGGPKGGYGKGGIIRNTVLCKEKGPCYNKKVTCPAK

Query:  CFSSYSRSGKGYGGGGGGGGCTIDCTKKCIGYC
        CFSSYSRSGKGYGGGGGGGGCTIDC KKCIGYC
Subjt:  CFSSYSRSGKGYGGGGGGGGCTIDCTKKCIGYC

A0A6J1EFI3 neuropeptide-like protein 314.1e-5582.96Show/hide
Query:  MNRSTLLSTFLVAVLL--------TLAAGGGPGYDGMFGPGSGFGDIPGFGKGWDKGIIGGGYGGGYGGPKGGYGKGGIIRNTVLCKEKGPCYNKKVTCP
        MNR   +ST LVAVLL        T    GG G+DGMFGPG+GF DIPGFGKGWDKGIIGGGYGGGYGGPKGGYGKGGIIRNTV+CKEKGPCYNKKVTCP
Subjt:  MNRSTLLSTFLVAVLL--------TLAAGGGPGYDGMFGPGSGFGDIPGFGKGWDKGIIGGGYGGGYGGPKGGYGKGGIIRNTVLCKEKGPCYNKKVTCP

Query:  AKCFSSYSRSGKGYGGGGGGGGCTIDCTKKCIGYC
        AKCFSSYSRSGKG+GGGGGGGGCTIDCTKKCIGYC
Subjt:  AKCFSSYSRSGKGYGGGGGGGGCTIDCTKKCIGYC

A0A6J1KMH9 eggshell protein-like6.6e-5381.2Show/hide
Query:  MNRSTLLSTFLVAVLLT------LAAGGGPGYDGMFGPGSGFGDIPGFGKGWDKGIIGGGYGGGYGGPKGGYGKGGIIRNTVLCKEKGPCYNKKVTCPAK
        MNR   +ST LV  LL+       A   G G+DGMF PG+GF DIPGFGKGWDKGIIGGGYGGGYGGPKGGYGKGGIIRNTV+CKEKGPCYNKKVTCPAK
Subjt:  MNRSTLLSTFLVAVLLT------LAAGGGPGYDGMFGPGSGFGDIPGFGKGWDKGIIGGGYGGGYGGPKGGYGKGGIIRNTVLCKEKGPCYNKKVTCPAK

Query:  CFSSYSRSGKGYGGGGGGGGCTIDCTKKCIGYC
        CFSSYSRSGKG+GGGGGGGGCTIDCTKKCIGYC
Subjt:  CFSSYSRSGKGYGGGGGGGGCTIDCTKKCIGYC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G61255.1 BEST Arabidopsis thaliana protein match is: glycine-rich protein (TAIR:AT4G21620.2)2.5e-2058Show/hide
Query:  FGPGSGFGDIPGFGKGWDKGII--GGGYGGGYGGPKGGYGKGGIIRNTVLCKEKGPCYNKKVTCPAKCFSSYSRSGKGYGGGGGGGGCTIDCTKKCIGYC
        +  G G G  PG       G I  G G GG Y    GGY KG  +R TV+C+EKG CY KK+TCPAKCF S SR GKGY  GGGGGGCTIDC KKC+ YC
Subjt:  FGPGSGFGDIPGFGKGWDKGII--GGGYGGGYGGPKGGYGKGGIIRNTVLCKEKGPCYNKKVTCPAKCFSSYSRSGKGYGGGGGGGGCTIDCTKKCIGYC

AT4G21620.1 glycine-rich protein1.3e-3763.85Show/hide
Query:  RSTLLSTFLVAVLL--TLAAGGGPGYDGM-FG--PGSGFGDIPGFGKGWDKGIIGGGYGGGYGGPKGGYGKGGIIRNTVLCKEKGPCYNKKVTCPAKCFS
        +S LL++ L+ +L+  T +A    G DG+ FG  PGSGF  IPGFG G+    +GGGYGGG+GGP GG+GKGG++R TV CKEKGPC  KK+ CPAKCF 
Subjt:  RSTLLSTFLVAVLL--TLAAGGGPGYDGM-FG--PGSGFGDIPGFGKGWDKGIIGGGYGGGYGGPKGGYGKGGIIRNTVLCKEKGPCYNKKVTCPAKCFS

Query:  SYSRSGKGYGGGGGGGGCTIDCTKKCIGYC
        S+SRSGKGYGGGGGGGGCT+DC KKCI YC
Subjt:  SYSRSGKGYGGGGGGGGCTIDCTKKCIGYC

AT4G21620.2 glycine-rich protein1.8e-2678.12Show/hide
Query:  GGYGKGGIIRNTVLCKEKGPCYNKKVTCPAKCFSSYSRSGKGYGGGGGGGGCTIDCTKKCIGYC
        GG+GKGG++R TV CKEKGPC  KK+ CPAKCF S+SRSGKGYGGGGGGGGCT+DC KKCI YC
Subjt:  GGYGKGGIIRNTVLCKEKGPCYNKKVTCPAKCFSSYSRSGKGYGGGGGGGGCTIDCTKKCIGYC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATCGCTCAACGCTACTTTCCACTTTCCTCGTCGCCGTTCTCCTCACCCTCGCCGCCGGCGGAGGCCCCGGCTACGACGGCATGTTCGGACCCGGCTCCGGATTCGG
CGACATACCCGGCTTCGGAAAGGGCTGGGACAAGGGCATCATCGGCGGCGGATACGGCGGCGGCTACGGCGGCCCCAAAGGCGGCTACGGGAAGGGCGGAATCATAAGAA
ACACTGTGCTCTGTAAAGAGAAAGGCCCTTGTTACAATAAGAAGGTGACGTGTCCGGCCAAGTGCTTCTCCTCTTACAGCCGATCCGGCAAGGGCTACGGCGGCGGCGGC
GGCGGCGGTGGCTGCACCATCGACTGCACTAAGAAATGTATCGGTTATTGTTAG
mRNA sequenceShow/hide mRNA sequence
CTCCTCATTTTCAAATTTTCTATCCATATCACATTATCGAAAACTTTTCTAATGTGAAAAGAAAGAAGAGAAAGAGAAAAACGAAGCCGACCTCGAAAGCCCATTAATGA
GGAGCCAACTGCCCCTCCATTACCATCTTTCCATTAATGCATTTCCTGCCCCTCCACTTTCTTCAACACCCACTTTCACTTCTCTTATTTCTACTTTTTCCCCCCCACTT
TTCTCTCCTAATTACCCAAAAACGCGTCTAAAATGAATCGCTCAACGCTACTTTCCACTTTCCTCGTCGCCGTTCTCCTCACCCTCGCCGCCGGCGGAGGCCCCGGCTAC
GACGGCATGTTCGGACCCGGCTCCGGATTCGGCGACATACCCGGCTTCGGAAAGGGCTGGGACAAGGGCATCATCGGCGGCGGATACGGCGGCGGCTACGGCGGCCCCAA
AGGCGGCTACGGGAAGGGCGGAATCATAAGAAACACTGTGCTCTGTAAAGAGAAAGGCCCTTGTTACAATAAGAAGGTGACGTGTCCGGCCAAGTGCTTCTCCTCTTACA
GCCGATCCGGCAAGGGCTACGGCGGCGGCGGCGGCGGCGGTGGCTGCACCATCGACTGCACTAAGAAATGTATCGGTTATTGTTAGAGAGGGGGCGGCGGCGGCTTCTGA
GTGTTTTTGTTTAACACGGCTGCCGGAAAAAAAAAACGTATCTATAATTAATTAGTATGCTTGTTTTAATGGGTTAAAAAAAAGGGGCTATGTACCGCAGTTTTACTAGA
CTGTTATATATAAATTATTAGAAATATAATTACTATTAAGTGGTGTTGTGTAATGTTGTATCAGTGTTTGAATTATGGTTTTCTTGGACTCTTTTGGAATACAGCTTTTT
TAATTATGAATATGTAGTGAGTATTATAATAATTTCCACGTGTTTGATTGGTTTTGAATTATTATGCATCTATCTATAATTTGAGGGTTTTGTTTGAGCTGGT
Protein sequenceShow/hide protein sequence
MNRSTLLSTFLVAVLLTLAAGGGPGYDGMFGPGSGFGDIPGFGKGWDKGIIGGGYGGGYGGPKGGYGKGGIIRNTVLCKEKGPCYNKKVTCPAKCFSSYSRSGKGYGGGG
GGGGCTIDCTKKCIGYC