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Sed0027571 (gene) of Chayote v1 genome

Gene IDSed0027571
OrganismSechium edule (Chayote v1)
Description(S)-2-hydroxy-acid oxidase
Genome locationLG10:772051..772577
RNA-Seq ExpressionSed0027571
SyntenySed0027571
Gene Ontology termsGO:0009854 - oxidative photosynthetic carbon pathway (biological process)
GO:0005777 - peroxisome (cellular component)
GO:0003973 - (S)-2-hydroxy-acid oxidase activity (molecular function)
GO:0010181 - FMN binding (molecular function)
InterPro domainsIPR000262 - FMN-dependent dehydrogenase
IPR013785 - Aldolase-type TIM barrel


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6581436.1 (S)-2-hydroxy-acid oxidase GLO1, partial [Cucurbita argyrosperma subsp. sororia]1.9e-2572.53Show/hide
Query:  RRVVPVFVDGGIRCGTEVFKALALGASGIFV---------TEGEAGVRKVLQMLSDEFELTMALNGCCSLREIIRNHILADWDTPCVVLRL
        R  VPVF+DGG+R GT+VFKALALGASGIF+          EGEAGVRKVLQML DEFELTMAL+GC SL+EI RNHI+ADWDTP VV RL
Subjt:  RRVVPVFVDGGIRCGTEVFKALALGASGIFV---------TEGEAGVRKVLQMLSDEFELTMALNGCCSLREIIRNHILADWDTPCVVLRL

KAG7034728.1 Peroxisomal (S)-2-hydroxy-acid oxidase GLO1 [Cucurbita argyrosperma subsp. argyrosperma]1.9e-2572.53Show/hide
Query:  RRVVPVFVDGGIRCGTEVFKALALGASGIFV---------TEGEAGVRKVLQMLSDEFELTMALNGCCSLREIIRNHILADWDTPCVVLRL
        R  VPVF+DGG+R GT+VFKALALGASGIF+          EGEAGVRKVLQML DEFELTMAL+GC SL+EI RNHI+ADWDTP VV RL
Subjt:  RRVVPVFVDGGIRCGTEVFKALALGASGIFV---------TEGEAGVRKVLQMLSDEFELTMALNGCCSLREIIRNHILADWDTPCVVLRL

WP_200854166.1 alpha-hydroxy-acid oxidizing protein, partial [Klebsiella pneumoniae]2.5e-2571.59Show/hide
Query:  VPVFVDGGIRCGTEVFKALALGASGIFV---------TEGEAGVRKVLQMLSDEFELTMALNGCCSLREIIRNHILADWDTPCVVLRL
        VPVF+DGG+R GT+VFKALALGASGIF+          EGEAG+RKVLQML DEFELTMAL+GCCSLREI RNHI+ DWD P  V RL
Subjt:  VPVFVDGGIRCGTEVFKALALGASGIFV---------TEGEAGVRKVLQMLSDEFELTMALNGCCSLREIIRNHILADWDTPCVVLRL

XP_021640691.1 peroxisomal (S)-2-hydroxy-acid oxidase GLO1 [Hevea brasiliensis]2.5e-2571.59Show/hide
Query:  VPVFVDGGIRCGTEVFKALALGASGIFV---------TEGEAGVRKVLQMLSDEFELTMALNGCCSLREIIRNHILADWDTPCVVLRL
        VPVF+DGG+R GT+VFKALALGASGIF+          EGEAG+RKVLQML DEFELTMAL+GCCSLREI RNHI+ DWD P  V RL
Subjt:  VPVFVDGGIRCGTEVFKALALGASGIFV---------TEGEAGVRKVLQMLSDEFELTMALNGCCSLREIIRNHILADWDTPCVVLRL

XP_022926037.1 (S)-2-hydroxy-acid oxidase GLO1 [Cucurbita moschata]1.9e-2572.53Show/hide
Query:  RRVVPVFVDGGIRCGTEVFKALALGASGIFV---------TEGEAGVRKVLQMLSDEFELTMALNGCCSLREIIRNHILADWDTPCVVLRL
        R  VPVF+DGG+R GT+VFKALALGASGIF+          EGEAGVRKVLQML DEFELTMAL+GC SL+EI RNHI+ADWDTP VV RL
Subjt:  RRVVPVFVDGGIRCGTEVFKALALGASGIFV---------TEGEAGVRKVLQMLSDEFELTMALNGCCSLREIIRNHILADWDTPCVVLRL

TrEMBL top hitse value%identityAlignment
A0A1S3AYS3 (S)-2-hydroxy-acid oxidase2.0e-2571.43Show/hide
Query:  RRVVPVFVDGGIRCGTEVFKALALGASGIFV---------TEGEAGVRKVLQMLSDEFELTMALNGCCSLREIIRNHILADWDTPCVVLRL
        R  VPVF+DGG+R GT+VFKALALGASGIF+          EGEAGVRKVLQML DEFELTMAL+GC SL+EI R+HILADWDTP +V RL
Subjt:  RRVVPVFVDGGIRCGTEVFKALALGASGIFV---------TEGEAGVRKVLQMLSDEFELTMALNGCCSLREIIRNHILADWDTPCVVLRL

A0A6J1EFK7 (S)-2-hydroxy-acid oxidase2.0e-2570.33Show/hide
Query:  RRVVPVFVDGGIRCGTEVFKALALGASGIFV---------TEGEAGVRKVLQMLSDEFELTMALNGCCSLREIIRNHILADWDTPCVVLRL
        R  VPVF+DGG+R GT+VFKALALGASGIF+          EGEAGVRKVLQML DEFELTMAL+GC S++EI RNHI+ADWDTP +V RL
Subjt:  RRVVPVFVDGGIRCGTEVFKALALGASGIFV---------TEGEAGVRKVLQMLSDEFELTMALNGCCSLREIIRNHILADWDTPCVVLRL

A0A6J1EGX3 (S)-2-hydroxy-acid oxidase9.1e-2672.53Show/hide
Query:  RRVVPVFVDGGIRCGTEVFKALALGASGIFV---------TEGEAGVRKVLQMLSDEFELTMALNGCCSLREIIRNHILADWDTPCVVLRL
        R  VPVF+DGG+R GT+VFKALALGASGIF+          EGEAGVRKVLQML DEFELTMAL+GC SL+EI RNHI+ADWDTP VV RL
Subjt:  RRVVPVFVDGGIRCGTEVFKALALGASGIFV---------TEGEAGVRKVLQMLSDEFELTMALNGCCSLREIIRNHILADWDTPCVVLRL

A0A6J1ISV7 (S)-2-hydroxy-acid oxidase9.1e-2672.53Show/hide
Query:  RRVVPVFVDGGIRCGTEVFKALALGASGIFV---------TEGEAGVRKVLQMLSDEFELTMALNGCCSLREIIRNHILADWDTPCVVLRL
        R  VPVF+DGG+R GT+VFKALALGASGIF+          EGEAGVRKVLQML DEFELTMAL+GC SL+EI RNHI+ADWDTP VV RL
Subjt:  RRVVPVFVDGGIRCGTEVFKALALGASGIFV---------TEGEAGVRKVLQMLSDEFELTMALNGCCSLREIIRNHILADWDTPCVVLRL

A0A6J1KPK8 (S)-2-hydroxy-acid oxidase2.0e-2570.33Show/hide
Query:  RRVVPVFVDGGIRCGTEVFKALALGASGIFV---------TEGEAGVRKVLQMLSDEFELTMALNGCCSLREIIRNHILADWDTPCVVLRL
        R  VPVF+DGG+R GT+VFKALALGASGIF+          EGEAGVRKVLQML DEFELTMAL+GC S++EI RNHI+ADWDTP +V RL
Subjt:  RRVVPVFVDGGIRCGTEVFKALALGASGIFV---------TEGEAGVRKVLQMLSDEFELTMALNGCCSLREIIRNHILADWDTPCVVLRL

SwissProt top hitse value%identityAlignment
B8AUI3 Peroxisomal (S)-2-hydroxy-acid oxidase GLO35.9e-2265Show/hide
Query:  VPVFVDGGIRCGTEVFKALALGASGIFV---------TEGEAGVRKVLQMLSDEFELTMALNGCCSLREIIRNHILADWD
        +PVF+DGG+R GT+VFKALALGASG+F+          +GEAGVRKVLQML DE ELTMAL+GC SL EI RNH++ D D
Subjt:  VPVFVDGGIRCGTEVFKALALGASGIFV---------TEGEAGVRKVLQMLSDEFELTMALNGCCSLREIIRNHILADWD

O49506 Peroxisomal (S)-2-hydroxy-acid oxidase GLO54.3e-2569.51Show/hide
Query:  VPVFVDGGIRCGTEVFKALALGASGIFV---------TEGEAGVRKVLQMLSDEFELTMALNGCCSLREIIRNHILADWDTP
        +PVF+DGG+R GT+VFKALALGASG+FV          +GEAGVRK+LQML DEFELTMAL+GC SLREI R HI  DWDTP
Subjt:  VPVFVDGGIRCGTEVFKALALGASGIFV---------TEGEAGVRKVLQMLSDEFELTMALNGCCSLREIIRNHILADWDTP

P05414 Peroxisomal (S)-2-hydroxy-acid oxidase2.8e-2465.85Show/hide
Query:  VPVFVDGGIRCGTEVFKALALGASGIFV---------TEGEAGVRKVLQMLSDEFELTMALNGCCSLREIIRNHILADWDTP
        +PVF+DGG+R GT+VFKALALGA+G+F+          EGEAGV+KVLQM+ DEFELTMAL+GC SL+EI R+HI ADWD P
Subjt:  VPVFVDGGIRCGTEVFKALALGASGIFV---------TEGEAGVRKVLQMLSDEFELTMALNGCCSLREIIRNHILADWDTP

Q9LRR9 (S)-2-hydroxy-acid oxidase GLO18.8e-2668.18Show/hide
Query:  VPVFVDGGIRCGTEVFKALALGASGIFV---------TEGEAGVRKVLQMLSDEFELTMALNGCCSLREIIRNHILADWDTPCVVLRL
        +PVF+DGG+R GT+VFKALALGASGIF+          EGEAGVRKVLQML DEFELTMAL+GC SL+EI RNHI  +WDTP    RL
Subjt:  VPVFVDGGIRCGTEVFKALALGASGIFV---------TEGEAGVRKVLQMLSDEFELTMALNGCCSLREIIRNHILADWDTPCVVLRL

Q9LRS0 (S)-2-hydroxy-acid oxidase GLO21.5e-2568.18Show/hide
Query:  VPVFVDGGIRCGTEVFKALALGASGIFV---------TEGEAGVRKVLQMLSDEFELTMALNGCCSLREIIRNHILADWDTPCVVLRL
        VPVF+DGG+R GT+VFKALALGASGIF+          EGEAGV+KVLQML DEFELTMAL+GC SL EI RNHI+ +WDTP  + RL
Subjt:  VPVFVDGGIRCGTEVFKALALGASGIFV---------TEGEAGVRKVLQMLSDEFELTMALNGCCSLREIIRNHILADWDTPCVVLRL

Arabidopsis top hitse value%identityAlignment
AT3G14420.1 Aldolase-type TIM barrel family protein6.2e-2768.18Show/hide
Query:  VPVFVDGGIRCGTEVFKALALGASGIFV---------TEGEAGVRKVLQMLSDEFELTMALNGCCSLREIIRNHILADWDTPCVVLRL
        +PVF+DGG+R GT+VFKALALGASGIF+          EGEAGVRKVLQML DEFELTMAL+GC SL+EI RNHI  +WDTP    RL
Subjt:  VPVFVDGGIRCGTEVFKALALGASGIFV---------TEGEAGVRKVLQMLSDEFELTMALNGCCSLREIIRNHILADWDTPCVVLRL

AT3G14420.2 Aldolase-type TIM barrel family protein6.2e-2768.18Show/hide
Query:  VPVFVDGGIRCGTEVFKALALGASGIFV---------TEGEAGVRKVLQMLSDEFELTMALNGCCSLREIIRNHILADWDTPCVVLRL
        +PVF+DGG+R GT+VFKALALGASGIF+          EGEAGVRKVLQML DEFELTMAL+GC SL+EI RNHI  +WDTP    RL
Subjt:  VPVFVDGGIRCGTEVFKALALGASGIFV---------TEGEAGVRKVLQMLSDEFELTMALNGCCSLREIIRNHILADWDTPCVVLRL

AT3G14420.3 Aldolase-type TIM barrel family protein6.2e-2768.18Show/hide
Query:  VPVFVDGGIRCGTEVFKALALGASGIFV---------TEGEAGVRKVLQMLSDEFELTMALNGCCSLREIIRNHILADWDTPCVVLRL
        +PVF+DGG+R GT+VFKALALGASGIF+          EGEAGVRKVLQML DEFELTMAL+GC SL+EI RNHI  +WDTP    RL
Subjt:  VPVFVDGGIRCGTEVFKALALGASGIFV---------TEGEAGVRKVLQMLSDEFELTMALNGCCSLREIIRNHILADWDTPCVVLRL

AT3G14420.4 Aldolase-type TIM barrel family protein6.2e-2768.18Show/hide
Query:  VPVFVDGGIRCGTEVFKALALGASGIFV---------TEGEAGVRKVLQMLSDEFELTMALNGCCSLREIIRNHILADWDTPCVVLRL
        +PVF+DGG+R GT+VFKALALGASGIF+          EGEAGVRKVLQML DEFELTMAL+GC SL+EI RNHI  +WDTP    RL
Subjt:  VPVFVDGGIRCGTEVFKALALGASGIFV---------TEGEAGVRKVLQMLSDEFELTMALNGCCSLREIIRNHILADWDTPCVVLRL

AT3G14420.5 Aldolase-type TIM barrel family protein6.2e-2768.18Show/hide
Query:  VPVFVDGGIRCGTEVFKALALGASGIFV---------TEGEAGVRKVLQMLSDEFELTMALNGCCSLREIIRNHILADWDTPCVVLRL
        +PVF+DGG+R GT+VFKALALGASGIF+          EGEAGVRKVLQML DEFELTMAL+GC SL+EI RNHI  +WDTP    RL
Subjt:  VPVFVDGGIRCGTEVFKALALGASGIFV---------TEGEAGVRKVLQMLSDEFELTMALNGCCSLREIIRNHILADWDTPCVVLRL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGCTCGCCAACTTGACTTCGTCCCAGCAACTATTGTGGCTTTGGAAGAGACGTGTAGTTCCCGTTTTCGTGGATGGCGGAATTCGATGTGGAACCGAAGTTTTCAA
AGCATTGGCACTCGGAGCATCTGGCATATTTGTAACCGAGGGTGAGGCTGGGGTGAGGAAAGTTCTTCAGATGCTGAGCGATGAGTTCGAGCTGACCATGGCATTGAACG
GCTGTTGCTCGCTTCGGGAGATCATTCGCAACCACATTCTAGCCGATTGGGACACTCCTTGTGTCGTGCTGAGGTTATGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGCTCGCCAACTTGACTTCGTCCCAGCAACTATTGTGGCTTTGGAAGAGACGTGTAGTTCCCGTTTTCGTGGATGGCGGAATTCGATGTGGAACCGAAGTTTTCAA
AGCATTGGCACTCGGAGCATCTGGCATATTTGTAACCGAGGGTGAGGCTGGGGTGAGGAAAGTTCTTCAGATGCTGAGCGATGAGTTCGAGCTGACCATGGCATTGAACG
GCTGTTGCTCGCTTCGGGAGATCATTCGCAACCACATTCTAGCCGATTGGGACACTCCTTGTGTCGTGCTGAGGTTATGA
Protein sequenceShow/hide protein sequence
MELANLTSSQQLLWLWKRRVVPVFVDGGIRCGTEVFKALALGASGIFVTEGEAGVRKVLQMLSDEFELTMALNGCCSLREIIRNHILADWDTPCVVLRL