; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0027576 (gene) of Chayote v1 genome

Gene IDSed0027576
OrganismSechium edule (Chayote v1)
Description50S ribosomal protein L13
Genome locationLG05:36922447..36925682
RNA-Seq ExpressionSed0027576
SyntenySed0027576
Gene Ontology termsGO:0017148 - negative regulation of translation (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003729 - mRNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR005822 - Ribosomal protein L13
IPR005823 - Ribosomal protein L13, bacterial-type
IPR023563 - Ribosomal protein L13, conserved site
IPR036899 - Ribosomal protein L13 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607943.1 50S ribosomal protein L13, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]5.8e-12189.52Show/hide
Query:  MAMLCASSSTPTFSLHSTL------NRHIPRKSLVAGFPLPQSNSSFLHNRTTITLNSNPNSSVLQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP
        MAMLCASSST TFSLHSTL      NR IPR SLVAGFPLPQS SSFL  +TTITL S P SSV QVRAQELDRVPLEQRWMF+GDE+DGPDIWNKTWYP
Subjt:  MAMLCASSSTPTFSLHSTL------NRHIPRKSLVAGFPLPQSNSSFLHNRTTITLNSNPNSSVLQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP

Query:  KAADHVNTEKPWYVVDASDKILGRLASTIAIHIRGKNLATYTPSVDMGAFVIVVNAEKVAVSGRKRTDKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
        KAADHVNTEKPWYVVDA+DKILGRLASTIA HIRGK+L TYTPSVDMGAFVIVVNAEKVAVSGRKRT KLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
Subjt:  KAADHVNTEKPWYVVDASDKILGRLASTIAIHIRGKNLATYTPSVDMGAFVIVVNAEKVAVSGRKRTDKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH

Query:  AVRGMLPKGRLGRALFNHLKVYKGPEHPHEAQKPVDLPIRDKRINKTR
        AVRGMLPKGRLGRALFNHLKVYKGP+HPHEAQKPVDLPIRDKRINK R
Subjt:  AVRGMLPKGRLGRALFNHLKVYKGPEHPHEAQKPVDLPIRDKRINKTR

KAG7037458.1 50S ribosomal protein L13, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]4.9e-12089.11Show/hide
Query:  MAMLCASSSTPTFSLHSTL------NRHIPRKSLVAGFPLPQSNSSFLHNRTTITLNSNPNSSVLQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP
        MAMLCASSST TFSLHSTL      NR +PR SLVAGFPL QS SSFL  +TTITL S P SSV QVRAQELDRVPLEQRWMFEGDE+DGPDIWNKTWYP
Subjt:  MAMLCASSSTPTFSLHSTL------NRHIPRKSLVAGFPLPQSNSSFLHNRTTITLNSNPNSSVLQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP

Query:  KAADHVNTEKPWYVVDASDKILGRLASTIAIHIRGKNLATYTPSVDMGAFVIVVNAEKVAVSGRKRTDKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
        KAADHVNTEKPWYVVDA+DKILGRLASTIA HIRGK+L TYTPSVDMGAFVIVVNAEKVAVSGRKRT KLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
Subjt:  KAADHVNTEKPWYVVDASDKILGRLASTIAIHIRGKNLATYTPSVDMGAFVIVVNAEKVAVSGRKRTDKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH

Query:  AVRGMLPKGRLGRALFNHLKVYKGPEHPHEAQKPVDLPIRDKRINKTR
        AVRGMLPKGRLGRALFNHLKVYKGP+HPHEAQKPVDLPIRDKRINK R
Subjt:  AVRGMLPKGRLGRALFNHLKVYKGPEHPHEAQKPVDLPIRDKRINKTR

XP_022941245.1 50S ribosomal protein L13, chloroplastic-like [Cucurbita moschata]2.0e-12189.92Show/hide
Query:  MAMLCASSSTPTFSLHSTL------NRHIPRKSLVAGFPLPQSNSSFLHNRTTITLNSNPNSSVLQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP
        MAMLCASSST TFSLHSTL      NR IPR SLVAGFPLPQS SSFL  +TTITL S P SSV QVRAQELDRVPLEQRWMFEGDE+DGPDIWNKTWYP
Subjt:  MAMLCASSSTPTFSLHSTL------NRHIPRKSLVAGFPLPQSNSSFLHNRTTITLNSNPNSSVLQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP

Query:  KAADHVNTEKPWYVVDASDKILGRLASTIAIHIRGKNLATYTPSVDMGAFVIVVNAEKVAVSGRKRTDKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
        KAADHVNTEKPWYVVDA+DKILGRLASTIA HIRGK+L TYTPSVDMGAFVIVVNAEKVAVSGRKRT KLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
Subjt:  KAADHVNTEKPWYVVDASDKILGRLASTIAIHIRGKNLATYTPSVDMGAFVIVVNAEKVAVSGRKRTDKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH

Query:  AVRGMLPKGRLGRALFNHLKVYKGPEHPHEAQKPVDLPIRDKRINKTR
        AVRGMLPKGRLGRALFNHLKVYKGP+HPHEAQKPVDLPIRDKRINK R
Subjt:  AVRGMLPKGRLGRALFNHLKVYKGPEHPHEAQKPVDLPIRDKRINKTR

XP_022981281.1 50S ribosomal protein L13, chloroplastic-like [Cucurbita maxima]2.2e-12089.11Show/hide
Query:  MAMLCASSSTPTFSLHST------LNRHIPRKSLVAGFPLPQSNSSFLHNRTTITLNSNPNSSVLQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP
        MAMLCASSST TFSLHST       NR IPRKSLVAGFPLPQS SSFL  +TTITL S P SSV QVRAQELDRVPLEQRWMFEGDE+DGPDIWN TWYP
Subjt:  MAMLCASSSTPTFSLHST------LNRHIPRKSLVAGFPLPQSNSSFLHNRTTITLNSNPNSSVLQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP

Query:  KAADHVNTEKPWYVVDASDKILGRLASTIAIHIRGKNLATYTPSVDMGAFVIVVNAEKVAVSGRKRTDKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
        KA DHVNTEKPWYVVDA+DKILGRLASTIA HIRGK+L TYTPSVDMGAFVIVVNAEKVAVSGRKRT KLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
Subjt:  KAADHVNTEKPWYVVDASDKILGRLASTIAIHIRGKNLATYTPSVDMGAFVIVVNAEKVAVSGRKRTDKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH

Query:  AVRGMLPKGRLGRALFNHLKVYKGPEHPHEAQKPVDLPIRDKRINKTR
        AVRGMLPKGRLGRALFNHLKVYKGP+HPHEAQKPVDLPIRDKRINK R
Subjt:  AVRGMLPKGRLGRALFNHLKVYKGPEHPHEAQKPVDLPIRDKRINKTR

XP_023524699.1 50S ribosomal protein L13, chloroplastic-like [Cucurbita pepo subsp. pepo]1.3e-12089.52Show/hide
Query:  MAMLCASSSTPTFSLHSTL------NRHIPRKSLVAGFPLPQSNSSFLHNRTTITLNSNPNSSVLQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP
        MAMLCASSST TFSLHSTL      NR +PR SLVAGFPL QS SSFL  +TTITL S P SSVLQVRAQELDRVPLEQRWMFEGDE+DGPDIWNKTWYP
Subjt:  MAMLCASSSTPTFSLHSTL------NRHIPRKSLVAGFPLPQSNSSFLHNRTTITLNSNPNSSVLQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP

Query:  KAADHVNTEKPWYVVDASDKILGRLASTIAIHIRGKNLATYTPSVDMGAFVIVVNAEKVAVSGRKRTDKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
        KAADHVNTEKPWYVVDA+DKILGRLASTIA HIRGK+L TYTPSVDMGAFVIVVNAEKVAVSGRKRT KLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
Subjt:  KAADHVNTEKPWYVVDASDKILGRLASTIAIHIRGKNLATYTPSVDMGAFVIVVNAEKVAVSGRKRTDKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH

Query:  AVRGMLPKGRLGRALFNHLKVYKGPEHPHEAQKPVDLPIRDKRINKTR
        AVRGMLPKGRLGRALFNHLKVYKGP+HPHEAQKPVDLPIRDKRINK R
Subjt:  AVRGMLPKGRLGRALFNHLKVYKGPEHPHEAQKPVDLPIRDKRINKTR

TrEMBL top hitse value%identityAlignment
A0A0A0KZG1 Uncharacterized protein1.1e-11786.29Show/hide
Query:  MAMLCASSSTPTFSLHSTL------NRHIPRKSLVAGFPLPQSNSSFLHNRTTITLNSNPNSSVLQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP
        MAMLCASSSTPTFSLHSTL      N+  PR SL+  FPLP S SSFL  +T+I+L SN   S LQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP
Subjt:  MAMLCASSSTPTFSLHSTL------NRHIPRKSLVAGFPLPQSNSSFLHNRTTITLNSNPNSSVLQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP

Query:  KAADHVNTEKPWYVVDASDKILGRLASTIAIHIRGKNLATYTPSVDMGAFVIVVNAEKVAVSGRKRTDKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
        KAADHVNTEKPWYVVDA+DKILGRLASTIA HIRGK+L TYTPSVDMGAFVIVVNAEK+AVSG+KRT KLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
Subjt:  KAADHVNTEKPWYVVDASDKILGRLASTIAIHIRGKNLATYTPSVDMGAFVIVVNAEKVAVSGRKRTDKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH

Query:  AVRGMLPKGRLGRALFNHLKVYKGPEHPHEAQKPVDLPIRDKRINKTR
        AVRGMLPKGRLGRALFNHLKVYKGP+HPHEAQKPVDLPIRDKRINK R
Subjt:  AVRGMLPKGRLGRALFNHLKVYKGPEHPHEAQKPVDLPIRDKRINKTR

A0A6J1C1B3 50S ribosomal protein L13, chloroplastic2.0e-11988.31Show/hide
Query:  MAMLCASSSTPTFSLHSTL------NRHIPRKSLVAGFPLPQSNSSFLHNRTTITLNSNPNSSVLQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP
        MAMLCASSST TF LHST+      NR IPRKSLVAGFPLP S SSFL  +T ITLNS P SSVLQ+RAQELDRVPLEQRWMFEGDELDGPDIWN TWYP
Subjt:  MAMLCASSSTPTFSLHSTL------NRHIPRKSLVAGFPLPQSNSSFLHNRTTITLNSNPNSSVLQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP

Query:  KAADHVNTEKPWYVVDASDKILGRLASTIAIHIRGKNLATYTPSVDMGAFVIVVNAEKVAVSGRKRTDKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
        KAADHVNTEK WYVVDA+DKILGRLASTIAIHIRGKNL TYTPSVDMGAFVIVVNAEKVAVSGRKRT+KLYRRHSGRPGGM VETF+QLQQRIPERIIEH
Subjt:  KAADHVNTEKPWYVVDASDKILGRLASTIAIHIRGKNLATYTPSVDMGAFVIVVNAEKVAVSGRKRTDKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH

Query:  AVRGMLPKGRLGRALFNHLKVYKGPEHPHEAQKPVDLPIRDKRINKTR
        AVRGMLPKGRLGRALFNHLKVYKGP+HPHEAQKPV+LPIRDKRINK R
Subjt:  AVRGMLPKGRLGRALFNHLKVYKGPEHPHEAQKPVDLPIRDKRINKTR

A0A6J1F6Z3 50S ribosomal protein L13, chloroplastic-like6.5e-11887.5Show/hide
Query:  MAMLCASSSTPTFSLHSTL------NRHIPRKSLVAGFPLPQSNSSFLHNRTTITLNSNPNSSVLQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP
        MAMLCASSSTPTF +HSTL      NR IPRKS V GFPLPQS S  L  +TTITLNS   SS +QVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP
Subjt:  MAMLCASSSTPTFSLHSTL------NRHIPRKSLVAGFPLPQSNSSFLHNRTTITLNSNPNSSVLQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP

Query:  KAADHVNTEKPWYVVDASDKILGRLASTIAIHIRGKNLATYTPSVDMGAFVIVVNAEKVAVSGRKRTDKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
        KA DHVNTEKPWYVVDA+DKILGRLASTIA HIRGK+L TYTPSVDMGAFVIVVNAEKVAVSGRKRT KLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
Subjt:  KAADHVNTEKPWYVVDASDKILGRLASTIAIHIRGKNLATYTPSVDMGAFVIVVNAEKVAVSGRKRTDKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH

Query:  AVRGMLPKGRLGRALFNHLKVYKGPEHPHEAQKPVDLPIRDKRINKTR
        AVRGMLPKGRLGRALFNHLKVYKGP+HPHEAQKPV+LPIRDKRINK R
Subjt:  AVRGMLPKGRLGRALFNHLKVYKGPEHPHEAQKPVDLPIRDKRINKTR

A0A6J1FT16 50S ribosomal protein L13, chloroplastic-like9.7e-12289.92Show/hide
Query:  MAMLCASSSTPTFSLHSTL------NRHIPRKSLVAGFPLPQSNSSFLHNRTTITLNSNPNSSVLQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP
        MAMLCASSST TFSLHSTL      NR IPR SLVAGFPLPQS SSFL  +TTITL S P SSV QVRAQELDRVPLEQRWMFEGDE+DGPDIWNKTWYP
Subjt:  MAMLCASSSTPTFSLHSTL------NRHIPRKSLVAGFPLPQSNSSFLHNRTTITLNSNPNSSVLQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP

Query:  KAADHVNTEKPWYVVDASDKILGRLASTIAIHIRGKNLATYTPSVDMGAFVIVVNAEKVAVSGRKRTDKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
        KAADHVNTEKPWYVVDA+DKILGRLASTIA HIRGK+L TYTPSVDMGAFVIVVNAEKVAVSGRKRT KLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
Subjt:  KAADHVNTEKPWYVVDASDKILGRLASTIAIHIRGKNLATYTPSVDMGAFVIVVNAEKVAVSGRKRTDKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH

Query:  AVRGMLPKGRLGRALFNHLKVYKGPEHPHEAQKPVDLPIRDKRINKTR
        AVRGMLPKGRLGRALFNHLKVYKGP+HPHEAQKPVDLPIRDKRINK R
Subjt:  AVRGMLPKGRLGRALFNHLKVYKGPEHPHEAQKPVDLPIRDKRINKTR

A0A6J1IW42 50S ribosomal protein L13, chloroplastic-like1.1e-12089.11Show/hide
Query:  MAMLCASSSTPTFSLHST------LNRHIPRKSLVAGFPLPQSNSSFLHNRTTITLNSNPNSSVLQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP
        MAMLCASSST TFSLHST       NR IPRKSLVAGFPLPQS SSFL  +TTITL S P SSV QVRAQELDRVPLEQRWMFEGDE+DGPDIWN TWYP
Subjt:  MAMLCASSSTPTFSLHST------LNRHIPRKSLVAGFPLPQSNSSFLHNRTTITLNSNPNSSVLQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP

Query:  KAADHVNTEKPWYVVDASDKILGRLASTIAIHIRGKNLATYTPSVDMGAFVIVVNAEKVAVSGRKRTDKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
        KA DHVNTEKPWYVVDA+DKILGRLASTIA HIRGK+L TYTPSVDMGAFVIVVNAEKVAVSGRKRT KLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
Subjt:  KAADHVNTEKPWYVVDASDKILGRLASTIAIHIRGKNLATYTPSVDMGAFVIVVNAEKVAVSGRKRTDKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH

Query:  AVRGMLPKGRLGRALFNHLKVYKGPEHPHEAQKPVDLPIRDKRINKTR
        AVRGMLPKGRLGRALFNHLKVYKGP+HPHEAQKPVDLPIRDKRINK R
Subjt:  AVRGMLPKGRLGRALFNHLKVYKGPEHPHEAQKPVDLPIRDKRINKTR

SwissProt top hitse value%identityAlignment
P12629 50S ribosomal protein L13, chloroplastic3.6e-8163.79Show/hide
Query:  MLCASSST-PTFSLHSTLNRHIPRKSLVAGFPLPQSNSSF-LHNRTTITLNSNPNSSVLQVRAQ-----ELDRVPLEQRWMFEGDELDGPDIWNKTWYPK
        M CASS T P+     +      +++ V  FP P   ++  +  R + + ++       Q++        +  VPL+QRWMF  +E  GPDIWN TWYPK
Subjt:  MLCASSST-PTFSLHSTLNRHIPRKSLVAGFPLPQSNSSF-LHNRTTITLNSNPNSSVLQVRAQ-----ELDRVPLEQRWMFEGDELDGPDIWNKTWYPK

Query:  AADHVNTEKPWYVVDASDKILGRLASTIAIHIRGKNLATYTPSVDMGAFVIVVNAEKVAVSGRKRTDKLYRRHSGRPGGMTVETFDQLQQRIPERIIEHA
        +ADHV T+K WYVVDA+D ILGR+ASTIAIHIRGKNLA+YTPSVDMGAFVIVVNA+KVAVSG+KRT KLYRRHSGRPGG+  ETFDQLQ+RIPERIIEHA
Subjt:  AADHVNTEKPWYVVDASDKILGRLASTIAIHIRGKNLATYTPSVDMGAFVIVVNAEKVAVSGRKRTDKLYRRHSGRPGGMTVETFDQLQQRIPERIIEHA

Query:  VRGMLPKGRLGRALFNHLKVYKGPEHPHEAQKPVDLPIRDKRI
        VRGMLPKGRLGR LFNHLKVYKG EHPH+AQ+P+DLP+RDKRI
Subjt:  VRGMLPKGRLGRALFNHLKVYKGPEHPHEAQKPVDLPIRDKRI

Q3MF94 50S ribosomal protein L139.5e-5067.59Show/hide
Query:  NKTWYPKAADHVNTEKPWYVVDASDKILGRLASTIAIHIRGKNLATYTPSVDMGAFVIVVNAEKVAVSGRKRTDKLYRRHSGRPGGMTVETFDQLQQRIP
        +KT+ P      + E+ WYVVDA+DK LGRLAS IA+ +RGKN A YTP +D G FVIVVNAEKVAV+G+KRT KLYRRHSGRPGGM  ETF +LQQR+P
Subjt:  NKTWYPKAADHVNTEKPWYVVDASDKILGRLASTIAIHIRGKNLATYTPSVDMGAFVIVVNAEKVAVSGRKRTDKLYRRHSGRPGGMTVETFDQLQQRIP

Query:  ERIIEHAVRGMLPKGRLGRALFNHLKVYKGPEHPHEAQKPVDLPI
        ERI+EHAV+GMLPK  LG+ LF  LKVY GP HPH+AQKP +L I
Subjt:  ERIIEHAVRGMLPKGRLGRALFNHLKVYKGPEHPHEAQKPVDLPI

Q8DMK8 50S ribosomal protein L131.4e-4872.66Show/hide
Query:  WYVVDASDKILGRLASTIAIHIRGKNLATYTPSVDMGAFVIVVNAEKVAVSGRKRTDKLYRRHSGRPGGMTVETFDQLQQRIPERIIEHAVRGMLPKGRL
        WYV+DA+D+ LGRLA+ IA  +RGKN A YTP +D G FVIV+NAEKV V+G+KR+ KLYRRHSGRPGGM +ETFDQLQ RIPERIIEHAV+GMLPK  L
Subjt:  WYVVDASDKILGRLASTIAIHIRGKNLATYTPSVDMGAFVIVVNAEKVAVSGRKRTDKLYRRHSGRPGGMTVETFDQLQQRIPERIIEHAVRGMLPKGRL

Query:  GRALFNHLKVYKGPEHPHEAQKPVDLPI
        GR LF  LKVY GPEHPH+AQKP  L I
Subjt:  GRALFNHLKVYKGPEHPHEAQKPVDLPI

Q8YPK6 50S ribosomal protein L132.8e-4966.9Show/hide
Query:  NKTWYPKAADHVNTEKPWYVVDASDKILGRLASTIAIHIRGKNLATYTPSVDMGAFVIVVNAEKVAVSGRKRTDKLYRRHSGRPGGMTVETFDQLQQRIP
        +KT+ P      + E+ WYVVDA+DK LGRLAS IA+ +RGKN A YTP +D G FVIVVNA+KVAV+G+KRT KLYRRHSGRPGGM  ETF +LQQR+P
Subjt:  NKTWYPKAADHVNTEKPWYVVDASDKILGRLASTIAIHIRGKNLATYTPSVDMGAFVIVVNAEKVAVSGRKRTDKLYRRHSGRPGGMTVETFDQLQQRIP

Query:  ERIIEHAVRGMLPKGRLGRALFNHLKVYKGPEHPHEAQKPVDLPI
        ERI+EHAV+GMLPK  LG+ LF  LKVY GP HPH+AQKP +L I
Subjt:  ERIIEHAVRGMLPKGRLGRALFNHLKVYKGPEHPHEAQKPVDLPI

Q9SYL9 50S ribosomal protein L13, chloroplastic2.7e-8971.19Show/hide
Query:  MAMLCASSSTPTFSLHSTLNRHIPRKSLVAGFPLPQSNSSFLHNRTTITLNSNPNSSVLQVRAQ-----ELDRVPLEQRWMFEGDELDGPDIWNKTWYPK
        MA+LC SSST   S  S  +    RKS   GF L   +   +  R  I  NS      LQV+ +         VP  QRWMF+ +E +GPDIWN TWYPK
Subjt:  MAMLCASSSTPTFSLHSTLNRHIPRKSLVAGFPLPQSNSSFLHNRTTITLNSNPNSSVLQVRAQ-----ELDRVPLEQRWMFEGDELDGPDIWNKTWYPK

Query:  AADHVNTEKPWYVVDASDKILGRLASTIAIHIRGKNLATYTPSVDMGAFVIVVNAEKVAVSGRKRTDKLYRRHSGRPGGMTVETFDQLQQRIPERIIEHA
        A+DHVNT+KPW+VVDA+DKILGRLASTIA HIRGKNLA+YTPSVDMGAFVIVVNAEKVAVSG+KR  KLYRRHSGRPGGMTVETFDQLQQRIPERI+EHA
Subjt:  AADHVNTEKPWYVVDASDKILGRLASTIAIHIRGKNLATYTPSVDMGAFVIVVNAEKVAVSGRKRTDKLYRRHSGRPGGMTVETFDQLQQRIPERIIEHA

Query:  VRGMLPKGRLGRALFNHLKVYKGPEHPHEAQKPVDLPIRDKRI
        VRGMLPKGRLGRALFNHLKVYKGP+HPHEAQKP+DLPIRDKRI
Subjt:  VRGMLPKGRLGRALFNHLKVYKGPEHPHEAQKPVDLPIRDKRI

Arabidopsis top hitse value%identityAlignment
AT1G78630.1 Ribosomal protein L13 family protein2.0e-9071.19Show/hide
Query:  MAMLCASSSTPTFSLHSTLNRHIPRKSLVAGFPLPQSNSSFLHNRTTITLNSNPNSSVLQVRAQ-----ELDRVPLEQRWMFEGDELDGPDIWNKTWYPK
        MA+LC SSST   S  S  +    RKS   GF L   +   +  R  I  NS      LQV+ +         VP  QRWMF+ +E +GPDIWN TWYPK
Subjt:  MAMLCASSSTPTFSLHSTLNRHIPRKSLVAGFPLPQSNSSFLHNRTTITLNSNPNSSVLQVRAQ-----ELDRVPLEQRWMFEGDELDGPDIWNKTWYPK

Query:  AADHVNTEKPWYVVDASDKILGRLASTIAIHIRGKNLATYTPSVDMGAFVIVVNAEKVAVSGRKRTDKLYRRHSGRPGGMTVETFDQLQQRIPERIIEHA
        A+DHVNT+KPW+VVDA+DKILGRLASTIA HIRGKNLA+YTPSVDMGAFVIVVNAEKVAVSG+KR  KLYRRHSGRPGGMTVETFDQLQQRIPERI+EHA
Subjt:  AADHVNTEKPWYVVDASDKILGRLASTIAIHIRGKNLATYTPSVDMGAFVIVVNAEKVAVSGRKRTDKLYRRHSGRPGGMTVETFDQLQQRIPERIIEHA

Query:  VRGMLPKGRLGRALFNHLKVYKGPEHPHEAQKPVDLPIRDKRI
        VRGMLPKGRLGRALFNHLKVYKGP+HPHEAQKP+DLPIRDKRI
Subjt:  VRGMLPKGRLGRALFNHLKVYKGPEHPHEAQKPVDLPIRDKRI

AT3G01790.1 Ribosomal protein L13 family protein1.7e-1737.6Show/hide
Query:  WYVVDASDKILGRLASTIAIHIRGKNLATYTPSVDMGAFVIVVNAEKVAVSGRKRTDKLYRRHSGRPGGMTVETFDQLQQRIPERIIEHAVRGMLPKGRL
        W V DA  ++LGRLAS I+  ++ K+  TY P+ D G   IV+NA+++  +GRK TDK YR H+G  G +   +      + P  +I  AV  MLP   L
Subjt:  WYVVDASDKILGRLASTIAIHIRGKNLATYTPSVDMGAFVIVVNAEKVAVSGRKRTDKLYRRHSGRPGGMTVETFDQLQQRIPERIIEHAVRGMLPKGRL

Query:  GRALFNHLKVYKGPEHPHEAQKPVD
               L++++G EHP    KP++
Subjt:  GRALFNHLKVYKGPEHPHEAQKPVD

AT3G01790.2 Ribosomal protein L13 family protein1.7e-1737.6Show/hide
Query:  WYVVDASDKILGRLASTIAIHIRGKNLATYTPSVDMGAFVIVVNAEKVAVSGRKRTDKLYRRHSGRPGGMTVETFDQLQQRIPERIIEHAVRGMLPKGRL
        W V DA  ++LGRLAS I+  ++ K+  TY P+ D G   IV+NA+++  +GRK TDK YR H+G  G +   +      + P  +I  AV  MLP   L
Subjt:  WYVVDASDKILGRLASTIAIHIRGKNLATYTPSVDMGAFVIVVNAEKVAVSGRKRTDKLYRRHSGRPGGMTVETFDQLQQRIPERIIEHAVRGMLPKGRL

Query:  GRALFNHLKVYKGPEHPHEAQKPVD
               L++++G EHP    KP++
Subjt:  GRALFNHLKVYKGPEHPHEAQKPVD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGATGCTCTGTGCTTCTTCCTCCACACCCACTTTTTCTCTACACTCCACTCTTAACAGACACATTCCCAGAAAGTCACTCGTTGCTGGGTTTCCTCTCCCACAATC
AAACTCTTCATTTCTTCACAATCGGACCACCATTACTCTAAACTCAAACCCCAACAGTTCGGTCCTTCAAGTGCGAGCTCAGGAGCTGGACCGCGTCCCTTTAGAACAGC
GCTGGATGTTCGAGGGCGACGAACTCGACGGCCCTGACATATGGAATAAAACATGGTACCCGAAGGCTGCAGATCATGTGAACACTGAAAAACCTTGGTATGTGGTTGAT
GCCTCTGATAAGATTTTGGGAAGGCTTGCTTCCACCATTGCCATTCATATCCGAGGGAAGAATTTGGCAACCTACACTCCTAGTGTGGATATGGGGGCTTTTGTGATTGT
GGTAAATGCAGAAAAAGTCGCCGTATCTGGTAGAAAGAGGACAGACAAACTATACAGGAGGCATTCAGGGCGACCAGGTGGTATGACAGTAGAAACTTTTGACCAGCTAC
AACAGAGAATTCCGGAAAGAATTATTGAGCATGCTGTTCGTGGTATGCTTCCGAAAGGGAGGCTTGGAAGAGCACTTTTTAATCACTTGAAGGTTTACAAAGGACCAGAG
CATCCACATGAGGCACAAAAGCCAGTTGACCTGCCAATTAGGGACAAAAGGATAAACAAGACAAGATAG
mRNA sequenceShow/hide mRNA sequence
AGAAGTCTGAAAATCTCATTTGCAATAGGGGGTATGGTTTCACATTTTGGAGAAGGAAACCGCAACAATTTTATCCTTCCGGTTTAGCATTTTGGCATTCACATAGGGCC
GTAGTCTTCTTATCCACTCTCCAAAGCAGAGCTACAATGGCGATGCTCTGTGCTTCTTCCTCCACACCCACTTTTTCTCTACACTCCACTCTTAACAGACACATTCCCAG
AAAGTCACTCGTTGCTGGGTTTCCTCTCCCACAATCAAACTCTTCATTTCTTCACAATCGGACCACCATTACTCTAAACTCAAACCCCAACAGTTCGGTCCTTCAAGTGC
GAGCTCAGGAGCTGGACCGCGTCCCTTTAGAACAGCGCTGGATGTTCGAGGGCGACGAACTCGACGGCCCTGACATATGGAATAAAACATGGTACCCGAAGGCTGCAGAT
CATGTGAACACTGAAAAACCTTGGTATGTGGTTGATGCCTCTGATAAGATTTTGGGAAGGCTTGCTTCCACCATTGCCATTCATATCCGAGGGAAGAATTTGGCAACCTA
CACTCCTAGTGTGGATATGGGGGCTTTTGTGATTGTGGTAAATGCAGAAAAAGTCGCCGTATCTGGTAGAAAGAGGACAGACAAACTATACAGGAGGCATTCAGGGCGAC
CAGGTGGTATGACAGTAGAAACTTTTGACCAGCTACAACAGAGAATTCCGGAAAGAATTATTGAGCATGCTGTTCGTGGTATGCTTCCGAAAGGGAGGCTTGGAAGAGCA
CTTTTTAATCACTTGAAGGTTTACAAAGGACCAGAGCATCCACATGAGGCACAAAAGCCAGTTGACCTGCCAATTAGGGACAAAAGGATAAACAAGACAAGATAGTATGA
ATTTCGAAGAGAAAGCGAACGAAGAAACAATGTTCATAGACTTTGAGTTAGAGTTTTCATGCTTCAGCTTAATTTCATGTCAGTATTTGATTTTATAATCTGATTCCAGA
TTCTAGTCTTCTCTGATGACTTGCCTAGCCTAAGTGACTTTTGCAAAGTGGTAATTAAGAAGAGGAAGTCTTTAAATCTTGTCCTCTTGAAGGTTGTGGTAGTGATGATT
TTGGTTACCTTTGTTGATTGATTTCTCTATTTAATGAGTTGTTTATTCGTGTTGAAATGGCAAAGGTTTTGACAATGGCGATTATATCATATGCACTTTTTTTAGTCTAA
AAGACATTAGTTTCCT
Protein sequenceShow/hide protein sequence
MAMLCASSSTPTFSLHSTLNRHIPRKSLVAGFPLPQSNSSFLHNRTTITLNSNPNSSVLQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYPKAADHVNTEKPWYVVD
ASDKILGRLASTIAIHIRGKNLATYTPSVDMGAFVIVVNAEKVAVSGRKRTDKLYRRHSGRPGGMTVETFDQLQQRIPERIIEHAVRGMLPKGRLGRALFNHLKVYKGPE
HPHEAQKPVDLPIRDKRINKTR