CuGenDBv2

Gene ID	Sed0027578
Organism	Sechium edule (Chayote v1)
Description	EF-hand domain-containing protein
Genome location	LG06:40704803..40708805
RNA-Seq Expression	Sed0027578
Synteny	Sed0027578
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6601391.1 hypothetical protein SDJN03_06624, partial [Cucurbita argyrosperma subsp. sororia]

4.1e-89

78.64

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Query:  MCWNFSLLQFLLILLLLFSFSASLDAQLQNTHGVVRNEEIQLGFRRRVLLSFKETPRGSNVTFECSRSGPCVACIYSEKNDEKYRCSETGYRIPLKCVEI
        MCWN  LL    +LLLLFSF ASLDAQLQNT  V  NEEI++GF RR LLSFKETP+GSNV+FECSRSGPC+AC+YSEKNDEKYRCSETGYRIPLKCVEI
Subjt:  MCWNFSLLQFLLILLLLFSFSASLDAQLQNTHGVVRNEEIQLGFRRRVLLSFKETPRGSNVTFECSRSGPCVACIYSEKNDEKYRCSETGYRIPLKCVEI

Query:  KATSKVSDKKKSTDGRSMLEMSYEHELVIPVL-DASDHASSVAHRNLRDGSNAGTDDSQAYITYRSCIPSVNEEKLSVIGFESIVLCVLVVSGSFVYFRQ
        K TSKVS++KKS DGRSMLEMSYEH+LVIPVL DA  HAS +AHRNLRDGS + TD +QAY TYRSCIPSVNEEKLSV+GFE IVLC+L+VSGSF+Y R+
Subjt:  KATSKVSDKKKSTDGRSMLEMSYEHELVIPVL-DASDHASSVAHRNLRDGSNAGTDDSQAYITYRSCIPSVNEEKLSVIGFESIVLCVLVVSGSFVYFRQ

Query:  KRAVSTAGFGSGRVQSNPRF
        KR VSTAGF SGR+QSN RF
Subjt:  KRAVSTAGFGSGRVQSNPRF

KAG7032169.1 hypothetical protein SDJN02_06212, partial [Cucurbita argyrosperma subsp. argyrosperma]

8.2e-90

79.09

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Query:  MCWNFSLLQFLLILLLLFSFSASLDAQLQNTHGVVRNEEIQLGFRRRVLLSFKETPRGSNVTFECSRSGPCVACIYSEKNDEKYRCSETGYRIPLKCVEI
        MCWN  LL    +LLLLFSFSASLDAQLQNT  V  NEEI++GF RR LLSFKETP+GSNV+FECSRSGPC+AC+YSEKNDEKYRCSETGYRIPLKCVEI
Subjt:  MCWNFSLLQFLLILLLLFSFSASLDAQLQNTHGVVRNEEIQLGFRRRVLLSFKETPRGSNVTFECSRSGPCVACIYSEKNDEKYRCSETGYRIPLKCVEI

Query:  KATSKVSDKKKSTDGRSMLEMSYEHELVIPVL-DASDHASSVAHRNLRDGSNAGTDDSQAYITYRSCIPSVNEEKLSVIGFESIVLCVLVVSGSFVYFRQ
        K TSKVS++KKS DGRSMLEMSYEH+LVIPVL DA  HAS +AHRNLRDGS + TD +QAY TYRSCIPSVNEEKLSV+GFE IVLC+L+VSGSF+Y R+
Subjt:  KATSKVSDKKKSTDGRSMLEMSYEHELVIPVL-DASDHASSVAHRNLRDGSNAGTDDSQAYITYRSCIPSVNEEKLSVIGFESIVLCVLVVSGSFVYFRQ

Query:  KRAVSTAGFGSGRVQSNPRF
        KR VSTAGF SGR+QSN RF
Subjt:  KRAVSTAGFGSGRVQSNPRF

XP_022991615.1 uncharacterized protein LOC111488176 isoform X1 [Cucurbita maxima]

4.1e-89

79.09

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Query:  MCWNFSLLQFLLILLLLFSFSASLDAQLQNTHGVVRNEEIQLGFRRRVLLSFKETPRGSNVTFECSRSGPCVACIYSEKNDEKYRCSETGYRIPLKCVEI
        MCWN  LL    +LLLLFSFSASLDAQLQNTH V  NEEI++GF RR LLSFKETP+GSNVTFECSRSGPC+AC+YSEKNDEKYRCSETGYRIPLKCVEI
Subjt:  MCWNFSLLQFLLILLLLFSFSASLDAQLQNTHGVVRNEEIQLGFRRRVLLSFKETPRGSNVTFECSRSGPCVACIYSEKNDEKYRCSETGYRIPLKCVEI

Query:  KATSKVSDKKKSTDGRSMLEMSYEHELVIPVL-DASDHASSVAHRNLRDGSNAGTDDSQAYITYRSCIPSVNEEKLSVIGFESIVLCVLVVSGSFVYFRQ
        K TSKVS ++KS DGRS+LEMSYEH+LVIPVL DA  HAS +AHR LRDGS + TD +QAY TYRSCIPSVNEEKLSV+GFE IVLC+L+VSGSFVY R+
Subjt:  KATSKVSDKKKSTDGRSMLEMSYEHELVIPVL-DASDHASSVAHRNLRDGSNAGTDDSQAYITYRSCIPSVNEEKLSVIGFESIVLCVLVVSGSFVYFRQ

Query:  KRAVSTAGFGSGRVQSNPRF
        KR VSTAGF SGR+QSN RF
Subjt:  KRAVSTAGFGSGRVQSNPRF

XP_023513837.1 uncharacterized protein LOC111778321 [Cucurbita pepo subsp. pepo]

2.2e-90

79.09

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Query:  MCWNFSLLQFLLILLLLFSFSASLDAQLQNTHGVVRNEEIQLGFRRRVLLSFKETPRGSNVTFECSRSGPCVACIYSEKNDEKYRCSETGYRIPLKCVEI
        MCWN  +L    +LLLLF FSASLDAQLQNT  V RNE I++GF RR LLSFKETP+GSNVTFECSRSGPC+AC+YSEKNDEKYRCSETGYRIPLKCVEI
Subjt:  MCWNFSLLQFLLILLLLFSFSASLDAQLQNTHGVVRNEEIQLGFRRRVLLSFKETPRGSNVTFECSRSGPCVACIYSEKNDEKYRCSETGYRIPLKCVEI

Query:  KATSKVSDKKKSTDGRSMLEMSYEHELVIPVL-DASDHASSVAHRNLRDGSNAGTDDSQAYITYRSCIPSVNEEKLSVIGFESIVLCVLVVSGSFVYFRQ
        K TS+VS++KKS DGRSMLEMSYEH+LVIPVL DAS HAS +AHRNLRDGS +GTD +QAY TYRSCIPSVNEEKLSV+GFE IVLC+L+VSGSF+Y R+
Subjt:  KATSKVSDKKKSTDGRSMLEMSYEHELVIPVL-DASDHASSVAHRNLRDGSNAGTDDSQAYITYRSCIPSVNEEKLSVIGFESIVLCVLVVSGSFVYFRQ

Query:  KRAVSTAGFGSGRVQSNPRF
        KR VSTAGF SGR+QSN RF
Subjt:  KRAVSTAGFGSGRVQSNPRF

XP_038891923.1 uncharacterized protein LOC120081267 [Benincasa hispida]

9.7e-91

81.74

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Query:  MCWNFSLLQFLLILLLLFSFSASLDAQLQNTHGVVRNEEIQLGFRRRVLLSFKETPRGSNVTFECSRSGPCVACIYSEKNDEKYRCSETGYRIPLKCVEI
        MCW FSLL F   LLLL SFSASL AQLQNT+ V RNEEI++GF RR LLSFKETP+GSNVTFECSRSGPCVAC+YSEKNDEKYRCSETGYRIPLKCVEI
Subjt:  MCWNFSLLQFLLILLLLFSFSASLDAQLQNTHGVVRNEEIQLGFRRRVLLSFKETPRGSNVTFECSRSGPCVACIYSEKNDEKYRCSETGYRIPLKCVEI

Query:  KATSKVSDKKKSTDGRSMLEMSYEHELVIPVLDASDHASSVAHRNLRDGSNAGTDDSQAYITYRSCIPSVNEEKLSVIGFESIVLCVLVVSGSFVYFRQK
        KATSKVS++KKS +GRSMLEMSYE +LVIP  +AS HASS AHRNLRDGS + TD SQ+YITYRSCIPSVNEEKLSV+GFESIVLC+L+VSGS VYFR+K
Subjt:  KATSKVSDKKKSTDGRSMLEMSYEHELVIPVLDASDHASSVAHRNLRDGSNAGTDDSQAYITYRSCIPSVNEEKLSVIGFESIVLCVLVVSGSFVYFRQK

Query:  RAVSTAGFGSGRVQSNPRF
        R+VSTAGF SGRVQSN RF
Subjt:  RAVSTAGFGSGRVQSNPRF

TrEMBL top hits

e value

%identity

Alignment

A0A6J1DAC4 uncharacterized protein LOC111019130

7.0e-87

79.09

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Query:  MCWNFSLLQFLLILLLLFSFSASLDAQLQNTHGVVRNEEIQLGFRRRVLLSFKETPRGSNVTFECSRSGPCVACIYSEKNDEKYRCSETGYRIPLKCVEI
        MC NFSL  F   LLLLFS SASLDA++QNT GV  NE+I++GF RR LLSFKETPRGSNVTFECSRSGPCVAC+YSEKNDEKYRCSETGYRIPLKCVEI
Subjt:  MCWNFSLLQFLLILLLLFSFSASLDAQLQNTHGVVRNEEIQLGFRRRVLLSFKETPRGSNVTFECSRSGPCVACIYSEKNDEKYRCSETGYRIPLKCVEI

Query:  KATSKVSDKKKSTDGRSMLEMSYEHELVIPV-LDASDHASSVAHRNLRDGSNAGTDDSQAYITYRSCIPSVNEEKLSVIGFESIVLCVLVVSGSFVYFRQ
        K TS VS +KKS +GRSM EMSYEH+LVIPV  DASDHASS  HRNLRD S + TD SQAYITYRSCIPS NEEKLSV+GFE IVLC+L+VSG  VYFR+
Subjt:  KATSKVSDKKKSTDGRSMLEMSYEHELVIPV-LDASDHASSVAHRNLRDGSNAGTDDSQAYITYRSCIPSVNEEKLSVIGFESIVLCVLVVSGSFVYFRQ

Query:  KRAVSTAGFGSGRVQSNPRF
        KR VSTAGF +GRVQSNPRF
Subjt:  KRAVSTAGFGSGRVQSNPRF

A0A6J1GXT8 uncharacterized protein LOC111458461 isoform X2

8.3e-88

78.64

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Query:  MCWNFSLLQFLLILLLLFSFSASLDAQLQNTHGVVRNEEIQLGFRRRVLLSFKETPRGSNVTFECSRSGPCVACIYSEKNDEKYRCSETGYRIPLKCVEI
        MCWN  LL    +LLLLFSF ASLDAQLQNT  V  NEEI++GF RR LLSFKETP+GSNV+FECSRSGPC+AC+YSEKNDEKYRCSETGYRIPLKCVEI
Subjt:  MCWNFSLLQFLLILLLLFSFSASLDAQLQNTHGVVRNEEIQLGFRRRVLLSFKETPRGSNVTFECSRSGPCVACIYSEKNDEKYRCSETGYRIPLKCVEI

Query:  KATSKVSDKKKSTDGRSMLEMSYEHELVIPVL-DASDHASSVAHRNLRDGSNAGTDDSQAYITYRSCIPSVNEEKLSVIGFESIVLCVLVVSGSFVYFRQ
        K TSKVS++KKS DGRSMLEMSYEH+LVIPVL DAS HAS +A RNLRDGS + TD +QAY TYRSCIPSVNEEKLSV+GFE IVLC+L+VSGSF+Y R+
Subjt:  KATSKVSDKKKSTDGRSMLEMSYEHELVIPVL-DASDHASSVAHRNLRDGSNAGTDDSQAYITYRSCIPSVNEEKLSVIGFESIVLCVLVVSGSFVYFRQ

Query:  KRAVSTAGFGSGRVQSNPRF
        KR VSTAGF SGR+QSN RF
Subjt:  KRAVSTAGFGSGRVQSNPRF

A0A6J1GZ36 uncharacterized protein LOC111458461 isoform X1

4.4e-89

78.64

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Query:  MCWNFSLLQFLLILLLLFSFSASLDAQLQNTHGVVRNEEIQLGFRRRVLLSFKETPRGSNVTFECSRSGPCVACIYSEKNDEKYRCSETGYRIPLKCVEI
        MCWN  LL    +LLLLFSF ASLDAQLQNT  V  NEEI++GF RR LLSFKETP+GSNV+FECSRSGPC+AC+YSEKNDEKYRCSETGYRIPLKCVEI
Subjt:  MCWNFSLLQFLLILLLLFSFSASLDAQLQNTHGVVRNEEIQLGFRRRVLLSFKETPRGSNVTFECSRSGPCVACIYSEKNDEKYRCSETGYRIPLKCVEI

Query:  KATSKVSDKKKSTDGRSMLEMSYEHELVIPVL-DASDHASSVAHRNLRDGSNAGTDDSQAYITYRSCIPSVNEEKLSVIGFESIVLCVLVVSGSFVYFRQ
        K TSKVS++KKS DGRSMLEMSYEH+LVIPVL DAS HAS +A RNLRDGS + TD +QAY TYRSCIPSVNEEKLSV+GFE IVLC+L+VSGSF+Y R+
Subjt:  KATSKVSDKKKSTDGRSMLEMSYEHELVIPVL-DASDHASSVAHRNLRDGSNAGTDDSQAYITYRSCIPSVNEEKLSVIGFESIVLCVLVVSGSFVYFRQ

Query:  KRAVSTAGFGSGRVQSNPRF
        KR VSTAGF SGR+QSN RF
Subjt:  KRAVSTAGFGSGRVQSNPRF

A0A6J1JTF7 uncharacterized protein LOC111488176 isoform X1

2.0e-89

79.09

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Query:  MCWNFSLLQFLLILLLLFSFSASLDAQLQNTHGVVRNEEIQLGFRRRVLLSFKETPRGSNVTFECSRSGPCVACIYSEKNDEKYRCSETGYRIPLKCVEI
        MCWN  LL    +LLLLFSFSASLDAQLQNTH V  NEEI++GF RR LLSFKETP+GSNVTFECSRSGPC+AC+YSEKNDEKYRCSETGYRIPLKCVEI
Subjt:  MCWNFSLLQFLLILLLLFSFSASLDAQLQNTHGVVRNEEIQLGFRRRVLLSFKETPRGSNVTFECSRSGPCVACIYSEKNDEKYRCSETGYRIPLKCVEI

Query:  KATSKVSDKKKSTDGRSMLEMSYEHELVIPVL-DASDHASSVAHRNLRDGSNAGTDDSQAYITYRSCIPSVNEEKLSVIGFESIVLCVLVVSGSFVYFRQ
        K TSKVS ++KS DGRS+LEMSYEH+LVIPVL DA  HAS +AHR LRDGS + TD +QAY TYRSCIPSVNEEKLSV+GFE IVLC+L+VSGSFVY R+
Subjt:  KATSKVSDKKKSTDGRSMLEMSYEHELVIPVL-DASDHASSVAHRNLRDGSNAGTDDSQAYITYRSCIPSVNEEKLSVIGFESIVLCVLVVSGSFVYFRQ

Query:  KRAVSTAGFGSGRVQSNPRF
        KR VSTAGF SGR+QSN RF
Subjt:  KRAVSTAGFGSGRVQSNPRF

A0A6J1JVD0 uncharacterized protein LOC111488176 isoform X2

2.4e-87

78.64

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Query:  MCWNFSLLQFLLILLLLFSFSASLDAQLQNTHGVVRNEEIQLGFRRRVLLSFKETPRGSNVTFECSRSGPCVACIYSEKNDEKYRCSETGYRIPLKCVEI
        MCWN  LL    +LLLLFSFSASLDAQLQNT G   NEEI++GF RR LLSFKETP+GSNVTFECSRSGPC+AC+YSEKNDEKYRCSETGYRIPLKCVEI
Subjt:  MCWNFSLLQFLLILLLLFSFSASLDAQLQNTHGVVRNEEIQLGFRRRVLLSFKETPRGSNVTFECSRSGPCVACIYSEKNDEKYRCSETGYRIPLKCVEI

Query:  KATSKVSDKKKSTDGRSMLEMSYEHELVIPVL-DASDHASSVAHRNLRDGSNAGTDDSQAYITYRSCIPSVNEEKLSVIGFESIVLCVLVVSGSFVYFRQ
        K TSKVS ++KS DGRS+LEMSYEH+LVIPVL DA  HAS +AHR LRDGS + TD +QAY TYRSCIPSVNEEKLSV+GFE IVLC+L+VSGSFVY R+
Subjt:  KATSKVSDKKKSTDGRSMLEMSYEHELVIPVL-DASDHASSVAHRNLRDGSNAGTDDSQAYITYRSCIPSVNEEKLSVIGFESIVLCVLVVSGSFVYFRQ

Query:  KRAVSTAGFGSGRVQSNPRF
        KR VSTAGF SGR+QSN RF
Subjt:  KRAVSTAGFGSGRVQSNPRF

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G69980.1 unknown protein

1.9e-39

44.55

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Query:  LILLLLFSFSASLDAQ-LQNTHGVVRNEEIQLGFRRRVLLSFKETPRGSNVTFECSRSGPCVACIYSEKNDEKYRCSETGYRIPLKCVEIKATSKVSDKK
        L++  +F +++S+ +  L   H    +EEI+    RR LL FKETP+GSN+TF CS SGPCV+C  SEK  EKYRCSETGYRIP KC E++   +V   K
Subjt:  LILLLLFSFSASLDAQ-LQNTHGVVRNEEIQLGFRRRVLLSFKETPRGSNVTFECSRSGPCVACIYSEKNDEKYRCSETGYRIPLKCVEIKATSKVSDKK

Query:  KSTDGRSMLEMSYEHELVIPVLDASDHASSVAHRNLRDGSNAGTD-DSQAYITYRSCIPSVNEEKLSVIGFESIVLCVLVVSGSFVYFRQKRAVSTAGF-
        K+ +  +  + S            +++      RNL D S+  T   SQ+Y TYRSC+PS +EEKLSV+GFESI+L + ++SG+ +Y R+++ V   G  
Subjt:  KSTDGRSMLEMSYEHELVIPVLDASDHASSVAHRNLRDGSNAGTD-DSQAYITYRSCIPSVNEEKLSVIGFESIVLCVLVVSGSFVYFRQKRAVSTAGF-

Query:  GSGRVQSNPRF
         SGR+Q N RF
Subjt:  GSGRVQSNPRF

Sequences

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CDS sequence

Show/hide CDS sequence

ATGTGTTGGAATTTTTCGCTGCTTCAATTTCTTCTTATTCTTCTTCTTCTCTTTAGCTTCTCTGCTTCACTCGATGCTCAATTGCAGAATACACACGGAGTTGTGAGGAA
CGAAGAAATTCAGTTAGGGTTTCGGCGCAGAGTTCTGTTGAGTTTCAAAGAGACTCCTCGTGGAAGTAACGTTACCTTTGAATGCTCTCGTTCTGGGCCGTGTGTTGCCT
GCATCTACTCTGAAAAGAATGATGAAAAATATCGCTGCAGTGAGACTGGCTATCGTATTCCCCTGAAATGTGTGGAAATCAAAGCCACATCAAAAGTTTCCGATAAGAAA
AAATCTACCGATGGTCGCTCAATGCTTGAAATGTCTTACGAGCACGAGCTCGTGATCCCTGTGCTAGATGCAAGCGATCATGCTTCATCAGTTGCACACAGAAATCTACG
TGATGGTTCTAACGCAGGAACAGATGATTCTCAGGCTTACATCACTTATAGAAGCTGCATTCCATCAGTTAACGAAGAAAAATTGTCAGTAATTGGTTTTGAGAGTATTG
TGCTATGCGTGCTGGTCGTTAGTGGTTCATTTGTATACTTCAGGCAAAAGCGAGCTGTTTCGACGGCTGGTTTTGGTTCTGGCAGGGTGCAGTCTAATCCCAGGTTCTAG

mRNA sequence

Show/hide mRNA sequence

GGAAGCCACTGGTTTGAGAATTCAATTCGCAGATTTTCGAAAGAAAGAAAAACGAAAAGAGAGAGAAAGTGAAGAACGAGAAGCAAAAAATGTGTTGGAATTTTTCGCTG
CTTCAATTTCTTCTTATTCTTCTTCTTCTCTTTAGCTTCTCTGCTTCACTCGATGCTCAATTGCAGAATACACACGGAGTTGTGAGGAACGAAGAAATTCAGTTAGGGTT
TCGGCGCAGAGTTCTGTTGAGTTTCAAAGAGACTCCTCGTGGAAGTAACGTTACCTTTGAATGCTCTCGTTCTGGGCCGTGTGTTGCCTGCATCTACTCTGAAAAGAATG
ATGAAAAATATCGCTGCAGTGAGACTGGCTATCGTATTCCCCTGAAATGTGTGGAAATCAAAGCCACATCAAAAGTTTCCGATAAGAAAAAATCTACCGATGGTCGCTCA
ATGCTTGAAATGTCTTACGAGCACGAGCTCGTGATCCCTGTGCTAGATGCAAGCGATCATGCTTCATCAGTTGCACACAGAAATCTACGTGATGGTTCTAACGCAGGAAC
AGATGATTCTCAGGCTTACATCACTTATAGAAGCTGCATTCCATCAGTTAACGAAGAAAAATTGTCAGTAATTGGTTTTGAGAGTATTGTGCTATGCGTGCTGGTCGTTA
GTGGTTCATTTGTATACTTCAGGCAAAAGCGAGCTGTTTCGACGGCTGGTTTTGGTTCTGGCAGGGTGCAGTCTAATCCCAGGTTCTAGTTTGGGAGTCGTCTTTTGTTA
CGATTATTCATGTGATGCTAATGTATTATCCACGAATACTACACATTTAATTTATAAATGAAATTAGCTGCCCATAATTTTCTTCCTGTTCCATTTTAGTCACCAATTTG
ATTGATTTGTAAATTCATTACATTCTTTTGGATGTTGTCAAAAAATTACTCACACTGAATAGACTTG

Protein sequence

Show/hide protein sequence

MCWNFSLLQFLLILLLLFSFSASLDAQLQNTHGVVRNEEIQLGFRRRVLLSFKETPRGSNVTFECSRSGPCVACIYSEKNDEKYRCSETGYRIPLKCVEIKATSKVSDKK
KSTDGRSMLEMSYEHELVIPVLDASDHASSVAHRNLRDGSNAGTDDSQAYITYRSCIPSVNEEKLSVIGFESIVLCVLVVSGSFVYFRQKRAVSTAGFGSGRVQSNPRF

Sed0027578 (gene) of Chayote v1 genome