; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0027601 (gene) of Chayote v1 genome

Gene IDSed0027601
OrganismSechium edule (Chayote v1)
DescriptionCCHC-type domain-containing protein
Genome locationLG01:21720252..21721214
RNA-Seq ExpressionSed0027601
SyntenySed0027601
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001878 - Zinc finger, CCHC-type
IPR025558 - Domain of unknown function DUF4283
IPR025836 - Zinc knuckle CX2CX4HX4C
IPR040256 - Uncharacterized protein At4g02000-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
MBA0619110.1 hypothetical protein [Gossypium davidsonii]1.2e-1831.74Show/hide
Query:  VSFESLGANKFLCTFSNKVIMERVIESRPWIYDNSLIVFDRMRGEIRISELEFKYSAFWIRLHDVPPACHTENSARGLGKLLGDFVGWDRDGDTMAAEKW
        +    LG  ++L  F N+V + RV+   PW ++N L++  R+      + LE   + FW+++HD+P    +E  A+ LG   G F+G+D    T  ++K+
Subjt:  VSFESLGANKFLCTFSNKVIMERVIESRPWIYDNSLIVFDRMRGEIRISELEFKYSAFWIRLHDVPPACHTENSARGLGKLLGDFVGWDRDGDTMAAEKW

Query:  VRLSYEKLPIFCAGCGRIGHLASRCNFVVIGEGMQFPFGDDLREPLNLPRGEKMEDVGQGFRGRGRG
        +R+ YEKL +FC  CG++GH  S C   +  E  +  FG DL     + R     + G    G G+G
Subjt:  VRLSYEKLPIFCAGCGRIGHLASRCNFVVIGEGMQFPFGDDLREPLNLPRGEKMEDVGQGFRGRGRG

MBA0654479.1 hypothetical protein [Gossypium klotzschianum]1.2e-1831.74Show/hide
Query:  VSFESLGANKFLCTFSNKVIMERVIESRPWIYDNSLIVFDRMRGEIRISELEFKYSAFWIRLHDVPPACHTENSARGLGKLLGDFVGWDRDGDTMAAEKW
        +    LG  ++L  F N+V + RV+   PW ++N L++  R+      + LE   + FW+++HD+P    +E  A+ LG   G F+G+D    T  ++K+
Subjt:  VSFESLGANKFLCTFSNKVIMERVIESRPWIYDNSLIVFDRMRGEIRISELEFKYSAFWIRLHDVPPACHTENSARGLGKLLGDFVGWDRDGDTMAAEKW

Query:  VRLSYEKLPIFCAGCGRIGHLASRCNFVVIGEGMQFPFGDDLREPLNLPRGEKMEDVGQGFRGRGRG
        +R+ YEKL +FC  CG++GH  S C   +  E  +  FG DL     + R     + G    G G+G
Subjt:  VRLSYEKLPIFCAGCGRIGHLASRCNFVVIGEGMQFPFGDDLREPLNLPRGEKMEDVGQGFRGRGRG

MBA0785172.1 hypothetical protein [Gossypium trilobum]1.8e-1727.54Show/hide
Query:  EQLIENLALGDQEAQDVFELDDNQISEYDS-------ALENIV---ACKINTEKFISP--DVSFESLGANKFLCTFSNKVIMERVIESRPWIYDNSLIVF
        E+ +ENL L D E +D F+ D+  +   +          +N+V   + +        P   +    +G  ++L  F +++ +ERVI   PW ++N L++ 
Subjt:  EQLIENLALGDQEAQDVFELDDNQISEYDS-------ALENIV---ACKINTEKFISP--DVSFESLGANKFLCTFSNKVIMERVIESRPWIYDNSLIVF

Query:  DRMRGEIRISELEFKYSAFWIRLHDVPPACHTENSARGLGKLLGDFVGWDRDGDTMAAEKWVR----LSYEKLPIFCAGCGRIGHLASRCNFVVIGEGMQ
         R+  E   + +E  ++ FW+++HD+PP   + + A+  G   G ++ +D    T+    ++R    L+YEKL +FC  CG++GH  S C   +  E  +
Subjt:  DRMRGEIRISELEFKYSAFWIRLHDVPPACHTENSARGLGKLLGDFVGWDRDGDTMAAEKWVR----LSYEKLPIFCAGCGRIGHLASRCNFVVIGEGMQ

Query:  FPFGDDL
          FG DL
Subjt:  FPFGDDL

PNY16581.1 cysteine desulfurase mitochondrial-like [Trifolium pratense]2.8e-1827.17Show/hide
Query:  ENLALGDQEAQDVFELDDNQISEYDSALENIVACKINTEKF--------------ISPDVSFESLGANKFLCTFSNKVIMERVIESRPWIYDNSLIVFDR
        +N+AL  +E +D FE D  ++ + +    ++V     T  F              +   V  + L  N FL  FS+K  +E V+ + PW +D ++++  R
Subjt:  ENLALGDQEAQDVFELDDNQISEYDSALENIVACKINTEKF--------------ISPDVSFESLGANKFLCTFSNKVIMERVIESRPWIYDNSLIVFDR

Query:  MRGEIRISELEFKYSAFWIRLHDVPPACHTENSARGLGKLLGDFVGWD-RDGDTMAAEKWVR-------------------------LSYEKLPIFCAGC
        + G+ + S++E     FW R++D+P    ++  AR LG +LG FV  D ++ + M    W++                           YE+LP FC  C
Subjt:  MRGEIRISELEFKYSAFWIRLHDVPPACHTENSARGLGKLLGDFVGWD-RDGDTMAAEKWVR-------------------------LSYEKLPIFCAGC

Query:  GRIGHLASRCNFVVIGEGMQF--------PFGDDLR-EPLNLPRGEKMEDVGQG
        GRIGH    C  +   +  +F        PFG  LR  PL    GE  +D   G
Subjt:  GRIGHLASRCNFVVIGEGMQF--------PFGDDLR-EPLNLPRGEKMEDVGQG

TXG48193.1 hypothetical protein EZV62_027487 [Acer yangbiense]7.3e-1927.8Show/hide
Query:  MDAAQFEQLIENLALGDQEAQDVFELDDNQISEYDSALENIVACKINTEKFISPD---------------VSFESLGANKFLCTFSNKVIMERVIESRPW
        M  A+  QL ENL+L D++A  V E+ ++ I + D  ++  +  K+ T K ++ +               V  E +G N F+  F+NK    +V    PW
Subjt:  MDAAQFEQLIENLALGDQEAQDVFELDDNQISEYDSALENIVACKINTEKFISPD---------------VSFESLGANKFLCTFSNKVIMERVIESRPW

Query:  IYDNSLIVFDRMRGEIRISELEFKYSAFWIRLHDVPPACHTENSARGLGKLLGDFVGWDRDGD---------------TMAAEKWVR-------------
        ++  SLIV ++ +G   I++L+F  + FW+++HD+P  C  + + + L + +G+ V    +                 T   ++W+R             
Subjt:  IYDNSLIVFDRMRGEIRISELEFKYSAFWIRLHDVPPACHTENSARGLGKLLGDFVGWDRDGD---------------TMAAEKWVR-------------

Query:  LSYEKLPIFCAGCGRIGHLASRC
        L YE+LP FC  CGRIGH    C
Subjt:  LSYEKLPIFCAGCGRIGHLASRC

TrEMBL top hitse value%identityAlignment
A0A2K3PMS8 Cysteine desulfurase mitochondrial-like1.3e-1827.17Show/hide
Query:  ENLALGDQEAQDVFELDDNQISEYDSALENIVACKINTEKF--------------ISPDVSFESLGANKFLCTFSNKVIMERVIESRPWIYDNSLIVFDR
        +N+AL  +E +D FE D  ++ + +    ++V     T  F              +   V  + L  N FL  FS+K  +E V+ + PW +D ++++  R
Subjt:  ENLALGDQEAQDVFELDDNQISEYDSALENIVACKINTEKF--------------ISPDVSFESLGANKFLCTFSNKVIMERVIESRPWIYDNSLIVFDR

Query:  MRGEIRISELEFKYSAFWIRLHDVPPACHTENSARGLGKLLGDFVGWD-RDGDTMAAEKWVR-------------------------LSYEKLPIFCAGC
        + G+ + S++E     FW R++D+P    ++  AR LG +LG FV  D ++ + M    W++                           YE+LP FC  C
Subjt:  MRGEIRISELEFKYSAFWIRLHDVPPACHTENSARGLGKLLGDFVGWD-RDGDTMAAEKWVR-------------------------LSYEKLPIFCAGC

Query:  GRIGHLASRCNFVVIGEGMQF--------PFGDDLR-EPLNLPRGEKMEDVGQG
        GRIGH    C  +   +  +F        PFG  LR  PL    GE  +D   G
Subjt:  GRIGHLASRCNFVVIGEGMQF--------PFGDDLR-EPLNLPRGEKMEDVGQG

A0A5C7GU64 CCHC-type domain-containing protein3.5e-1927.8Show/hide
Query:  MDAAQFEQLIENLALGDQEAQDVFELDDNQISEYDSALENIVACKINTEKFISPD---------------VSFESLGANKFLCTFSNKVIMERVIESRPW
        M  A+  QL ENL+L D++A  V E+ ++ I + D  ++  +  K+ T K ++ +               V  E +G N F+  F+NK    +V    PW
Subjt:  MDAAQFEQLIENLALGDQEAQDVFELDDNQISEYDSALENIVACKINTEKFISPD---------------VSFESLGANKFLCTFSNKVIMERVIESRPW

Query:  IYDNSLIVFDRMRGEIRISELEFKYSAFWIRLHDVPPACHTENSARGLGKLLGDFVGWDRDGD---------------TMAAEKWVR-------------
        ++  SLIV ++ +G   I++L+F  + FW+++HD+P  C  + + + L + +G+ V    +                 T   ++W+R             
Subjt:  IYDNSLIVFDRMRGEIRISELEFKYSAFWIRLHDVPPACHTENSARGLGKLLGDFVGWDRDGD---------------TMAAEKWVR-------------

Query:  LSYEKLPIFCAGCGRIGHLASRC
        L YE+LP FC  CGRIGH    C
Subjt:  LSYEKLPIFCAGCGRIGHLASRC

A0A7J8RZZ3 Uncharacterized protein6.0e-1931.74Show/hide
Query:  VSFESLGANKFLCTFSNKVIMERVIESRPWIYDNSLIVFDRMRGEIRISELEFKYSAFWIRLHDVPPACHTENSARGLGKLLGDFVGWDRDGDTMAAEKW
        +    LG  ++L  F N+V + RV+   PW ++N L++  R+      + LE   + FW+++HD+P    +E  A+ LG   G F+G+D    T  ++K+
Subjt:  VSFESLGANKFLCTFSNKVIMERVIESRPWIYDNSLIVFDRMRGEIRISELEFKYSAFWIRLHDVPPACHTENSARGLGKLLGDFVGWDRDGDTMAAEKW

Query:  VRLSYEKLPIFCAGCGRIGHLASRCNFVVIGEGMQFPFGDDLREPLNLPRGEKMEDVGQGFRGRGRG
        +R+ YEKL +FC  CG++GH  S C   +  E  +  FG DL     + R     + G    G G+G
Subjt:  VRLSYEKLPIFCAGCGRIGHLASRCNFVVIGEGMQFPFGDDLREPLNLPRGEKMEDVGQGFRGRGRG

A0A7J8UW83 Uncharacterized protein6.0e-1931.74Show/hide
Query:  VSFESLGANKFLCTFSNKVIMERVIESRPWIYDNSLIVFDRMRGEIRISELEFKYSAFWIRLHDVPPACHTENSARGLGKLLGDFVGWDRDGDTMAAEKW
        +    LG  ++L  F N+V + RV+   PW ++N L++  R+      + LE   + FW+++HD+P    +E  A+ LG   G F+G+D    T  ++K+
Subjt:  VSFESLGANKFLCTFSNKVIMERVIESRPWIYDNSLIVFDRMRGEIRISELEFKYSAFWIRLHDVPPACHTENSARGLGKLLGDFVGWDRDGDTMAAEKW

Query:  VRLSYEKLPIFCAGCGRIGHLASRCNFVVIGEGMQFPFGDDLREPLNLPRGEKMEDVGQGFRGRGRG
        +R+ YEKL +FC  CG++GH  S C   +  E  +  FG DL     + R     + G    G G+G
Subjt:  VRLSYEKLPIFCAGCGRIGHLASRCNFVVIGEGMQFPFGDDLREPLNLPRGEKMEDVGQGFRGRGRG

A0A7J9FIM9 CCHC-type domain-containing protein8.7e-1827.54Show/hide
Query:  EQLIENLALGDQEAQDVFELDDNQISEYDS-------ALENIV---ACKINTEKFISP--DVSFESLGANKFLCTFSNKVIMERVIESRPWIYDNSLIVF
        E+ +ENL L D E +D F+ D+  +   +          +N+V   + +        P   +    +G  ++L  F +++ +ERVI   PW ++N L++ 
Subjt:  EQLIENLALGDQEAQDVFELDDNQISEYDS-------ALENIV---ACKINTEKFISP--DVSFESLGANKFLCTFSNKVIMERVIESRPWIYDNSLIVF

Query:  DRMRGEIRISELEFKYSAFWIRLHDVPPACHTENSARGLGKLLGDFVGWDRDGDTMAAEKWVR----LSYEKLPIFCAGCGRIGHLASRCNFVVIGEGMQ
         R+  E   + +E  ++ FW+++HD+PP   + + A+  G   G ++ +D    T+    ++R    L+YEKL +FC  CG++GH  S C   +  E  +
Subjt:  DRMRGEIRISELEFKYSAFWIRLHDVPPACHTENSARGLGKLLGDFVGWDRDGDTMAAEKWVR----LSYEKLPIFCAGCGRIGHLASRCNFVVIGEGMQ

Query:  FPFGDDL
          FG DL
Subjt:  FPFGDDL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGCGGCTCAGTTTGAACAATTGATCGAAAATTTGGCGCTTGGAGATCAAGAGGCTCAAGATGTTTTTGAATTAGACGACAACCAGATTTCAGAGTATGATAGTGC
TTTAGAGAATATTGTAGCGTGCAAAATCAATACTGAGAAGTTCATTAGTCCTGATGTATCTTTCGAATCTCTTGGAGCCAACAAATTTCTTTGCACTTTTTCTAATAAAG
TGATAATGGAAAGAGTTATAGAATCGAGACCTTGGATTTACGATAATTCTTTGATAGTTTTTGATAGAATGAGGGGGGAGATAAGGATCTCAGAGTTAGAATTTAAATAT
TCAGCCTTCTGGATAAGGCTTCACGATGTCCCTCCTGCTTGTCATACAGAGAATAGTGCGAGAGGCTTGGGTAAACTCTTAGGGGATTTTGTGGGATGGGATCGTGATGG
TGATACAATGGCGGCTGAGAAATGGGTTAGGCTCTCTTATGAAAAATTGCCAATTTTCTGCGCTGGTTGTGGAAGAATAGGGCATTTGGCAAGTAGGTGCAATTTCGTGG
TCATTGGAGAAGGAATGCAATTCCCTTTTGGGGATGATCTGAGAGAACCGTTGAACCTACCCCGTGGCGAAAAAATGGAAGATGTTGGGCAAGGGTTCAGAGGGCGGGGA
AGAGGAAGAGGAAGAGGATTTGGTTATAGAGAAGGTGACCGATTTCAGGGGAGGAATAATGGTGAAGAGGAAGAGATGGAAAATCGGGAAATCAGTAGGAAAGTTGACGG
AGGAAGAGACGACCTTGAAACTGATCGGAAGTTTGGCAACGTCGCCGGTGTCAGAAAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGATGCGGCTCAGTTTGAACAATTGATCGAAAATTTGGCGCTTGGAGATCAAGAGGCTCAAGATGTTTTTGAATTAGACGACAACCAGATTTCAGAGTATGATAGTGC
TTTAGAGAATATTGTAGCGTGCAAAATCAATACTGAGAAGTTCATTAGTCCTGATGTATCTTTCGAATCTCTTGGAGCCAACAAATTTCTTTGCACTTTTTCTAATAAAG
TGATAATGGAAAGAGTTATAGAATCGAGACCTTGGATTTACGATAATTCTTTGATAGTTTTTGATAGAATGAGGGGGGAGATAAGGATCTCAGAGTTAGAATTTAAATAT
TCAGCCTTCTGGATAAGGCTTCACGATGTCCCTCCTGCTTGTCATACAGAGAATAGTGCGAGAGGCTTGGGTAAACTCTTAGGGGATTTTGTGGGATGGGATCGTGATGG
TGATACAATGGCGGCTGAGAAATGGGTTAGGCTCTCTTATGAAAAATTGCCAATTTTCTGCGCTGGTTGTGGAAGAATAGGGCATTTGGCAAGTAGGTGCAATTTCGTGG
TCATTGGAGAAGGAATGCAATTCCCTTTTGGGGATGATCTGAGAGAACCGTTGAACCTACCCCGTGGCGAAAAAATGGAAGATGTTGGGCAAGGGTTCAGAGGGCGGGGA
AGAGGAAGAGGAAGAGGATTTGGTTATAGAGAAGGTGACCGATTTCAGGGGAGGAATAATGGTGAAGAGGAAGAGATGGAAAATCGGGAAATCAGTAGGAAAGTTGACGG
AGGAAGAGACGACCTTGAAACTGATCGGAAGTTTGGCAACGTCGCCGGTGTCAGAAAGTAG
Protein sequenceShow/hide protein sequence
MDAAQFEQLIENLALGDQEAQDVFELDDNQISEYDSALENIVACKINTEKFISPDVSFESLGANKFLCTFSNKVIMERVIESRPWIYDNSLIVFDRMRGEIRISELEFKY
SAFWIRLHDVPPACHTENSARGLGKLLGDFVGWDRDGDTMAAEKWVRLSYEKLPIFCAGCGRIGHLASRCNFVVIGEGMQFPFGDDLREPLNLPRGEKMEDVGQGFRGRG
RGRGRGFGYREGDRFQGRNNGEEEEMENREISRKVDGGRDDLETDRKFGNVAGVRK