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Sed0027638 (gene) of Chayote v1 genome

Gene IDSed0027638
OrganismSechium edule (Chayote v1)
DescriptionWound-responsive family protein
Genome locationLG04:43494612..43495681
RNA-Seq ExpressionSed0027638
SyntenySed0027638
Gene Ontology termsNA
InterPro domainsIPR022251 - Protein of unknown function wound-induced


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031600.1 wound-responsive family protein [Cucumis melo var. makuwa]2.0e-3789.13Show/hide
Query:  MSYLNRVGMAASVAVAQGHTEIGSKWKSGLKSLRQGRRLLVSGENTADLRPLSSLVGSEGPEAVRSCDAAERIAQTDDSLRRVMYLNCWGQG
        MSYLNRVGMAASVAVAQGHTEIG KWKSGLKSLRQGRRLL SGEN+ADLRPLSSLVGSEG  +VRSCD  ERIAQ++DSLRRVMYLNCWGQG
Subjt:  MSYLNRVGMAASVAVAQGHTEIGSKWKSGLKSLRQGRRLLVSGENTADLRPLSSLVGSEGPEAVRSCDAAERIAQTDDSLRRVMYLNCWGQG

KAE8645762.1 hypothetical protein Csa_020269 [Cucumis sativus]2.0e-3789.13Show/hide
Query:  MSYLNRVGMAASVAVAQGHTEIGSKWKSGLKSLRQGRRLLVSGENTADLRPLSSLVGSEGPEAVRSCDAAERIAQTDDSLRRVMYLNCWGQG
        MSYLNRVGMAASVAVAQGHTEIG KWKSGLKSLRQGRRLL SGEN+ADLRPLSSLVGSEG  +VRSCD  ERIAQ++DSLRRVMYLNCWGQG
Subjt:  MSYLNRVGMAASVAVAQGHTEIGSKWKSGLKSLRQGRRLLVSGENTADLRPLSSLVGSEGPEAVRSCDAAERIAQTDDSLRRVMYLNCWGQG

KAG6572339.1 hypothetical protein SDJN03_29067, partial [Cucurbita argyrosperma subsp. sororia]1.5e-3790.22Show/hide
Query:  MSYLNRVGMAASVAVAQGHTEIGSKWKSGLKSLRQGRRLLVSGENTADLRPLSSLVGSEGPEAVRSCDAAERIAQTDDSLRRVMYLNCWGQG
        MSYLNRVGMAASVAVAQGHTEIG KWKSGLKSLRQGRRLL SGEN ADLRPLSSLVGSEGP AVR+ DA ER+AQT+DSLRRVMYLNCWGQG
Subjt:  MSYLNRVGMAASVAVAQGHTEIGSKWKSGLKSLRQGRRLLVSGENTADLRPLSSLVGSEGPEAVRSCDAAERIAQTDDSLRRVMYLNCWGQG

KAG6589197.1 hypothetical protein SDJN03_17762, partial [Cucurbita argyrosperma subsp. sororia]2.0e-3789.13Show/hide
Query:  MSYLNRVGMAASVAVAQGHTEIGSKWKSGLKSLRQGRRLLVSGENTADLRPLSSLVGSEGPEAVRSCDAAERIAQTDDSLRRVMYLNCWGQG
        MSYLNRVGMAASVAVAQGHTEIG KWKSGLKS RQGR+LL SGEN ADLRPLSSLVGSEGPEAV+S DAAERIAQ+++SLRRVMYLNCWGQG
Subjt:  MSYLNRVGMAASVAVAQGHTEIGSKWKSGLKSLRQGRRLLVSGENTADLRPLSSLVGSEGPEAVRSCDAAERIAQTDDSLRRVMYLNCWGQG

KAG7011951.1 hypothetical protein SDJN02_26859, partial [Cucurbita argyrosperma subsp. argyrosperma]6.8e-3891.3Show/hide
Query:  MSYLNRVGMAASVAVAQGHTEIGSKWKSGLKSLRQGRRLLVSGENTADLRPLSSLVGSEGPEAVRSCDAAERIAQTDDSLRRVMYLNCWGQG
        MSYLNRVGMAASVAVAQGHTEIG KWKSGLKSLRQGRRLL SGEN ADLRPLSSLVGSEGP AVRS DA ER+AQT+DSLRRVMYLNCWGQG
Subjt:  MSYLNRVGMAASVAVAQGHTEIGSKWKSGLKSLRQGRRLLVSGENTADLRPLSSLVGSEGPEAVRSCDAAERIAQTDDSLRRVMYLNCWGQG

TrEMBL top hitse value%identityAlignment
A0A0A0K6Z3 Uncharacterized protein9.6e-3889.13Show/hide
Query:  MSYLNRVGMAASVAVAQGHTEIGSKWKSGLKSLRQGRRLLVSGENTADLRPLSSLVGSEGPEAVRSCDAAERIAQTDDSLRRVMYLNCWGQG
        MSYLNRVGMAASVAVAQGHTEIG KWKSGLKSLRQGRRLL SGEN+ADLRPLSSLVGSEG  +VRSCD  ERIAQ++DSLRRVMYLNCWGQG
Subjt:  MSYLNRVGMAASVAVAQGHTEIGSKWKSGLKSLRQGRRLLVSGENTADLRPLSSLVGSEGPEAVRSCDAAERIAQTDDSLRRVMYLNCWGQG

A0A2N9HZV9 Uncharacterized protein1.3e-2159.78Show/hide
Query:  MSYLNRVGMAASVAVAQGHTEIGSKWKSGLKSLRQGRRLLVSGENTADLRPLSSLVGSEGPEAVRSCDAAERIAQTDDSLRRVMYLNCWGQG
        MSYLNRV MAA VAV QG T+ G KWKSG+KS++  ++ L SG +T+DLRPLS ++GS+    + + DA ER    D+SLRRVMYLNCWGQG
Subjt:  MSYLNRVGMAASVAVAQGHTEIGSKWKSGLKSLRQGRRLLVSGENTADLRPLSSLVGSEGPEAVRSCDAAERIAQTDDSLRRVMYLNCWGQG

A0A5A7SLJ2 Wound-responsive family protein9.6e-3889.13Show/hide
Query:  MSYLNRVGMAASVAVAQGHTEIGSKWKSGLKSLRQGRRLLVSGENTADLRPLSSLVGSEGPEAVRSCDAAERIAQTDDSLRRVMYLNCWGQG
        MSYLNRVGMAASVAVAQGHTEIG KWKSGLKSLRQGRRLL SGEN+ADLRPLSSLVGSEG  +VRSCD  ERIAQ++DSLRRVMYLNCWGQG
Subjt:  MSYLNRVGMAASVAVAQGHTEIGSKWKSGLKSLRQGRRLLVSGENTADLRPLSSLVGSEGPEAVRSCDAAERIAQTDDSLRRVMYLNCWGQG

A0A5N6RB28 Uncharacterized protein9.7e-2260.87Show/hide
Query:  MSYLNRVGMAASVAVAQGHTEIGSKWKSGLKSLRQGRRLLVSGENTADLRPLSSLVGSEGPEAVRSCDAAERIAQTDDSLRRVMYLNCWGQG
        MSYLNR+ MAASVAV QGHT+ G K K GLKSL+ G+R   SG ++ADLRP+S ++G +    + S DA ER  Q ++SLRRVMYLNCWGQG
Subjt:  MSYLNRVGMAASVAVAQGHTEIGSKWKSGLKSLRQGRRLLVSGENTADLRPLSSLVGSEGPEAVRSCDAAERIAQTDDSLRRVMYLNCWGQG

A0A6A1VB48 Uncharacterized protein6.3e-2158.7Show/hide
Query:  MSYLNRVGMAASVAVAQGHTEIGSKWKSGLKSLRQGRRLLVSGENTADLRPLSSLVGSEGPEAVRSCDAAERIAQTDDSLRRVMYLNCWGQG
        MSY+NRV MAASVAV QGH + G K KSG+ SL+ GRR   SG +++D+RPLS ++GS+    + + D+ ER  Q D+SLRRVMYLNCWGQG
Subjt:  MSYLNRVGMAASVAVAQGHTEIGSKWKSGLKSLRQGRRLLVSGENTADLRPLSSLVGSEGPEAVRSCDAAERIAQTDDSLRRVMYLNCWGQG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G28240.1 Wound-responsive family protein2.4e-1245.74Show/hide
Query:  MSYLNRVGMAASVAVAQGHTEIGSKWKSGLKSLRQGRRLLVSGENTADLRPLSS--LVGSEGPEAVRSCDAAERIAQTDDSLRRVMYLNCWGQG
        MSYLN+V MAAS    QG+ + G K KSGL S  + +R L     ++DLRPL++  L G   P   R   ++   +  D+SLR+VMYLNCW QG
Subjt:  MSYLNRVGMAASVAVAQGHTEIGSKWKSGLKSLRQGRRLLVSGENTADLRPLSS--LVGSEGPEAVRSCDAAERIAQTDDSLRRVMYLNCWGQG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTACCTTAACAGAGTTGGAATGGCGGCGAGCGTAGCGGTGGCTCAAGGCCACACGGAGATCGGATCCAAGTGGAAGTCCGGACTCAAATCTCTCCGGCAGGGGCG
GCGGCTTTTGGTTTCCGGTGAGAATACGGCGGATCTCCGGCCGCTTTCCAGTTTGGTTGGATCGGAAGGTCCTGAAGCCGTCCGGAGCTGTGACGCCGCCGAGAGGATAG
CGCAGACCGATGATTCTCTCCGGCGAGTTATGTACTTGAACTGTTGGGGCCAGGGCTGA
mRNA sequenceShow/hide mRNA sequence
GACTAAACCCATTGGCCCCGTCTATAAATACGGCTCCAATTTCTCCATTTTTCTATCAACGGAAAACCAGAGTGATTTTTCATTTTCGATTAAGAACTTTCATCAAAGTG
CTTTGAGGTTGAAGATGAGTTACCTTAACAGAGTTGGAATGGCGGCGAGCGTAGCGGTGGCTCAAGGCCACACGGAGATCGGATCCAAGTGGAAGTCCGGACTCAAATCT
CTCCGGCAGGGGCGGCGGCTTTTGGTTTCCGGTGAGAATACGGCGGATCTCCGGCCGCTTTCCAGTTTGGTTGGATCGGAAGGTCCTGAAGCCGTCCGGAGCTGTGACGC
CGCCGAGAGGATAGCGCAGACCGATGATTCTCTCCGGCGAGTTATGTACTTGAACTGTTGGGGCCAGGGCTGATTTGGTGAGATGAAATTCAAGGTGATGCAAGAACGGA
TCTGGTCGGCGATGCGATCGGAGTTGGGGCTGATCAGGCGACATGAAATGGAAGGTATTAGATCTGGAATTGATGCGATGAAGATGAAGAATTGTGATCTATAACTTGAA
GGATCGCTTTGTAGATTGGGGATAATTGTACAGAAATAGAGAATTGAACGGTTTCCACAAATAATAGAAATCTTGATTCTCTTTACTTTGCTTAATTTGAAGTTTATGTG
CCTTTAATTAAGCTTAAACTGAACTGAACTGAACTGAAGCAACTTTGTGATAATTGGAAACATAATCAGATCCAGATCTGTGCTAGTTGCTTGATAAATATAAAACTGAT
TTGGGTCTGGAAATAATTGTGCTGAAGAGCGGATGTTTAAGATCAGATCTTTCACAGTGGACAGGGAATTTGATAGATTAGAAATCAAAGAACTATTTAATCTGCAATTA
AAGATCAAGCAATCGAGATTTAGAGCCAAGTGATGAAATTCAATTTCTGTTTTCATGTGAATTATATCAATTTGTAGTTCAAGAATTTCCTCCACAGTTTCTGAAATCCA
TAAGATATCATGGAAATTAAAATGAAACCATCGTTGGTTTGTCTTGGTATTAAAAATGAGCATTCAAGATTCAGGGAATT
Protein sequenceShow/hide protein sequence
MSYLNRVGMAASVAVAQGHTEIGSKWKSGLKSLRQGRRLLVSGENTADLRPLSSLVGSEGPEAVRSCDAAERIAQTDDSLRRVMYLNCWGQG