; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0027656 (gene) of Chayote v1 genome

Gene IDSed0027656
OrganismSechium edule (Chayote v1)
DescriptionS-protein homolog
Genome locationLG01:12474287..12474721
RNA-Seq ExpressionSed0027656
SyntenySed0027656
Gene Ontology termsNA
InterPro domainsIPR010264 - Plant self-incompatibility S1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022137291.1 S-protein homolog 1-like [Momordica charantia]2.3e-3258.12Show/hide
Query:  QAPFSQWQVTIVNEMRDS-NMVVHCKSKDDDLGKRNLGAAAKFNWTFRENILQSTLFWCNFKSKHGKASGIVFWPEKGKWLSEKCDDKNCIWVG-GDQGI
        Q P S WQVTI N ++ S N+ VHCKSKDDDLG+  +    ++ W F+EN  Q+TLFWCNFKS +G ASG VFWPEK  WL+ +CD  NCIWV  GDQGI
Subjt:  QAPFSQWQVTIVNEMRDS-NMVVHCKSKDDDLGKRNLGAAAKFNWTFRENILQSTLFWCNFKSKHGKASGIVFWPEKGKWLSEKCDDKNCIWVG-GDQGI

Query:  YLHLGPQRGFKFVYPWK
        YL   PQR F+  Y W+
Subjt:  YLHLGPQRGFKFVYPWK

XP_022954425.1 S-protein homolog 74-like [Cucurbita moschata]4.5e-3654.69Show/hide
Query:  IMKPCFAA--SKIQAPFSQWQVTIVNEMRDSNMVVHCKSKDDDLGKRNLGAAAKFNWTFRENILQSTLFWCNFKSKHGKASGIVFWPEKGKWLSEKCDDK
        I+  CFA   S +   FS W+V IVN+++DS +VVHCKSKDDDLG+  + A  K+ W F EN+LQ+TL+WCNF SK G+ASG VFWPEK  WLS++C+  
Subjt:  IMKPCFAA--SKIQAPFSQWQVTIVNEMRDSNMVVHCKSKDDDLGKRNLGAAAKFNWTFRENILQSTLFWCNFKSKHGKASGIVFWPEKGKWLSEKCDDK

Query:  NCIWVGGDQGIYLHLGPQRGFKFVYPWK
         CIWV  D GI + LG    ++ VYPWK
Subjt:  NCIWVGGDQGIYLHLGPQRGFKFVYPWK

XP_022954427.1 S-protein homolog 74-like [Cucurbita moschata]5.5e-3452.34Show/hide
Query:  IMKPCFAA--SKIQAPFSQWQVTIVNEMRDSNMVVHCKSKDDDLGKRNLGAAAKFNWTFRENILQSTLFWCNFKSKHGKASGIVFWPEKGKWLSEKCDDK
        I+  CFA   S +   FS W+V IVN+++DS +V HCKSKDDDLG+  +    K+ W F EN+LQ+TL+WCNF SK G+A G VFWPEK  WLS++C+  
Subjt:  IMKPCFAA--SKIQAPFSQWQVTIVNEMRDSNMVVHCKSKDDDLGKRNLGAAAKFNWTFRENILQSTLFWCNFKSKHGKASGIVFWPEKGKWLSEKCDDK

Query:  NCIWVGGDQGIYLHLGPQRGFKFVYPWK
         CIWV  D GI + LG    ++ VYPWK
Subjt:  NCIWVGGDQGIYLHLGPQRGFKFVYPWK

XP_022954429.1 S-protein homolog 74-like [Cucurbita moschata]6.5e-3553.12Show/hide
Query:  IMKPCFAA--SKIQAPFSQWQVTIVNEMRDSNMVVHCKSKDDDLGKRNLGAAAKFNWTFRENILQSTLFWCNFKSKHGKASGIVFWPEKGKWLSEKCDDK
        I+  CFA   S +   FS W+V IVN+++DS +V HCKSKDDDLG+  +    K+ W F EN+LQ+TL+WCNF SK G+ASG VFWPEK  WLS++C+  
Subjt:  IMKPCFAA--SKIQAPFSQWQVTIVNEMRDSNMVVHCKSKDDDLGKRNLGAAAKFNWTFRENILQSTLFWCNFKSKHGKASGIVFWPEKGKWLSEKCDDK

Query:  NCIWVGGDQGIYLHLGPQRGFKFVYPWK
         CIWV  D GI + LG    ++ VYPWK
Subjt:  NCIWVGGDQGIYLHLGPQRGFKFVYPWK

XP_023001658.1 S-protein homolog 74-like [Cucurbita maxima]2.5e-3952.03Show/hide
Query:  MKPLNVICYILLFGLESN-IMKPCFA---ASKIQAPFSQWQVTIVNEMRDSNMVVHCKSKDDDLGKRNLGAAAKFNWTFRENILQSTLFWCNFKSKHGKA
        M+ +N +C+ILL GL SN +MKPCFA    SK+Q PFS+WQVTI N M DS ++VHCKSKD+DLG+  +     +   F+ENI Q+T FWC+F SK+G+ 
Subjt:  MKPLNVICYILLFGLESN-IMKPCFA---ASKIQAPFSQWQVTIVNEMRDSNMVVHCKSKDDDLGKRNLGAAAKFNWTFRENILQSTLFWCNFKSKHGKA

Query:  SGIVFWPEKGKWLSEKCDDKNCIWVGGDQGIYLHLGPQRGFKFVYPWK
        +G VFWPE+G  LS++C+D NC+W   D GI+L  G    ++  YPWK
Subjt:  SGIVFWPEKGKWLSEKCDDKNCIWVGGDQGIYLHLGPQRGFKFVYPWK

TrEMBL top hitse value%identityAlignment
A0A6J1C659 S-protein homolog1.1e-3258.12Show/hide
Query:  QAPFSQWQVTIVNEMRDS-NMVVHCKSKDDDLGKRNLGAAAKFNWTFRENILQSTLFWCNFKSKHGKASGIVFWPEKGKWLSEKCDDKNCIWVG-GDQGI
        Q P S WQVTI N ++ S N+ VHCKSKDDDLG+  +    ++ W F+EN  Q+TLFWCNFKS +G ASG VFWPEK  WL+ +CD  NCIWV  GDQGI
Subjt:  QAPFSQWQVTIVNEMRDS-NMVVHCKSKDDDLGKRNLGAAAKFNWTFRENILQSTLFWCNFKSKHGKASGIVFWPEKGKWLSEKCDDKNCIWVG-GDQGI

Query:  YLHLGPQRGFKFVYPWK
        YL   PQR F+  Y W+
Subjt:  YLHLGPQRGFKFVYPWK

A0A6J1GQZ0 S-protein homolog2.7e-3452.34Show/hide
Query:  IMKPCFAA--SKIQAPFSQWQVTIVNEMRDSNMVVHCKSKDDDLGKRNLGAAAKFNWTFRENILQSTLFWCNFKSKHGKASGIVFWPEKGKWLSEKCDDK
        I+  CFA   S +   FS W+V IVN+++DS +V HCKSKDDDLG+  +    K+ W F EN+LQ+TL+WCNF SK G+A G VFWPEK  WLS++C+  
Subjt:  IMKPCFAA--SKIQAPFSQWQVTIVNEMRDSNMVVHCKSKDDDLGKRNLGAAAKFNWTFRENILQSTLFWCNFKSKHGKASGIVFWPEKGKWLSEKCDDK

Query:  NCIWVGGDQGIYLHLGPQRGFKFVYPWK
         CIWV  D GI + LG    ++ VYPWK
Subjt:  NCIWVGGDQGIYLHLGPQRGFKFVYPWK

A0A6J1GSD6 S-protein homolog2.2e-3654.69Show/hide
Query:  IMKPCFAA--SKIQAPFSQWQVTIVNEMRDSNMVVHCKSKDDDLGKRNLGAAAKFNWTFRENILQSTLFWCNFKSKHGKASGIVFWPEKGKWLSEKCDDK
        I+  CFA   S +   FS W+V IVN+++DS +VVHCKSKDDDLG+  + A  K+ W F EN+LQ+TL+WCNF SK G+ASG VFWPEK  WLS++C+  
Subjt:  IMKPCFAA--SKIQAPFSQWQVTIVNEMRDSNMVVHCKSKDDDLGKRNLGAAAKFNWTFRENILQSTLFWCNFKSKHGKASGIVFWPEKGKWLSEKCDDK

Query:  NCIWVGGDQGIYLHLGPQRGFKFVYPWK
         CIWV  D GI + LG    ++ VYPWK
Subjt:  NCIWVGGDQGIYLHLGPQRGFKFVYPWK

A0A6J1GSZ3 S-protein homolog3.1e-3553.12Show/hide
Query:  IMKPCFAA--SKIQAPFSQWQVTIVNEMRDSNMVVHCKSKDDDLGKRNLGAAAKFNWTFRENILQSTLFWCNFKSKHGKASGIVFWPEKGKWLSEKCDDK
        I+  CFA   S +   FS W+V IVN+++DS +V HCKSKDDDLG+  +    K+ W F EN+LQ+TL+WCNF SK G+ASG VFWPEK  WLS++C+  
Subjt:  IMKPCFAA--SKIQAPFSQWQVTIVNEMRDSNMVVHCKSKDDDLGKRNLGAAAKFNWTFRENILQSTLFWCNFKSKHGKASGIVFWPEKGKWLSEKCDDK

Query:  NCIWVGGDQGIYLHLGPQRGFKFVYPWK
         CIWV  D GI + LG    ++ VYPWK
Subjt:  NCIWVGGDQGIYLHLGPQRGFKFVYPWK

A0A6J1KR58 S-protein homolog1.2e-3952.03Show/hide
Query:  MKPLNVICYILLFGLESN-IMKPCFA---ASKIQAPFSQWQVTIVNEMRDSNMVVHCKSKDDDLGKRNLGAAAKFNWTFRENILQSTLFWCNFKSKHGKA
        M+ +N +C+ILL GL SN +MKPCFA    SK+Q PFS+WQVTI N M DS ++VHCKSKD+DLG+  +     +   F+ENI Q+T FWC+F SK+G+ 
Subjt:  MKPLNVICYILLFGLESN-IMKPCFA---ASKIQAPFSQWQVTIVNEMRDSNMVVHCKSKDDDLGKRNLGAAAKFNWTFRENILQSTLFWCNFKSKHGKA

Query:  SGIVFWPEKGKWLSEKCDDKNCIWVGGDQGIYLHLGPQRGFKFVYPWK
        +G VFWPE+G  LS++C+D NC+W   D GI+L  G    ++  YPWK
Subjt:  SGIVFWPEKGKWLSEKCDDKNCIWVGGDQGIYLHLGPQRGFKFVYPWK

SwissProt top hitse value%identityAlignment
F4JLQ5 S-protein homolog 22.2e-0928.32Show/hide
Query:  PFSQWQVTIVNEMRDS-NMVVHCKSKDDDLGKRNLGAAAKFNWTFRENILQSTLFWCNFKSKHGKASGIVFWPEKGKWLSEKCDDKNCIWVGGDQGIYLH
        P S+  V I N++ +   ++ HCKSKDDDLG R L     ++++F       TL++C+F   +   S  ++   +      KC+   C+W     G    
Subjt:  PFSQWQVTIVNEMRDS-NMVVHCKSKDDDLGKRNLGAAAKFNWTFRENILQSTLFWCNFKSKHGKASGIVFWPEKGKWLSEKCDDKNCIWVGGDQGIYLH

Query:  LGPQRGFKFVYPW
            + F   YPW
Subjt:  LGPQRGFKFVYPW

F4JLS0 S-protein homolog 12.3e-1938.28Show/hide
Query:  LNVICYILLFGLESNIMKPCFAASKIQAP-FSQWQVTIVNEM-RDSNMVVHCKSKDDDLGKRNLGAAAKFNWTFRENILQSTLFWCNFKSKHGKASGIVF
        L  IC+ L    + +++        I  P  S+WQVT+VN +     + +HCKSK+DDLG+ NL    +F+W F EN+L ST FWC     +G  +  VF
Subjt:  LNVICYILLFGLESNIMKPCFAASKIQAP-FSQWQVTIVNEM-RDSNMVVHCKSKDDDLGKRNLGAAAKFNWTFRENILQSTLFWCNFKSKHGKASGIVF

Query:  WPEKGKWLSEKCDDKNCIWVGGDQGIYL
        W +    L  +C  KNCIW     G+YL
Subjt:  WPEKGKWLSEKCDDKNCIWVGGDQGIYL

F4JZG1 S-protein homolog 43.2e-0828.95Show/hide
Query:  LNVICYILLFGLESNIMKPCFAASKIQAPFSQWQVTIVNEMRD-SNMVVHCKSKDDDLGKRNLGAAAKFNWTFRENILQS-TLFWCNFKSKHGKASGIVF
        ++V+   LL  +  + +KP    S ++    +  VTI N + D S + +HCKS DDDLG + L     +++ FR +I+   TLF+C+F            
Subjt:  LNVICYILLFGLESNIMKPCFAASKIQAPFSQWQVTIVNEMRD-SNMVVHCKSKDDDLGKRNLGAAAKFNWTFRENILQS-TLFWCNFKSKHGKASGIVF

Query:  WPEKGKWLSEKCDDKN----------CIWVGGDQGIYLHLGPQRGFKFVYPW
        WP + KW +   DD++          CIW  G  G          F   Y W
Subjt:  WPEKGKWLSEKCDDKN----------CIWVGGDQGIYLHLGPQRGFKFVYPW

P0DN92 S-protein homolog 241.4e-0836.11Show/hide
Query:  QVTIVNEMRDSNMVVHCKSKDDDLGKRNLGAAAKFNWTFRENILQSTLFWCNFKSKHGKASGIVFWPEKGKWLSEKCDDKNCIWVGGDQGIYLHL-GPQR
        +VTI N+  D  + +HCKS+DDDLG   L     F W F  N   STL++C F    G+    VF   +      +C   NC W     GIY +   P +
Subjt:  QVTIVNEMRDSNMVVHCKSKDDDLGKRNLGAAAKFNWTFRENILQSTLFWCNFKSKHGKASGIVFWPEKGKWLSEKCDDKNCIWVGGDQGIYLHL-GPQR

Query:  GFKFVYPW
        G+ F Y W
Subjt:  GFKFVYPW

Q2HQ46 S-protein homolog 741.0e-1937.6Show/hide
Query:  ICYILLFGLESNIMKPCFAASKIQAP-FSQWQVTIVNEM-RDSNMVVHCKSKDDDLGKRNLGAAAKFNWTFRENILQSTLFWCNFKSKHGKASGIVFWPE
        IC+ L+   + +++        I  P  S+WQVT+ N +     + +HCKSK++DLG  NL    +F+W F EN+L STLFWC      G  +  VFW +
Subjt:  ICYILLFGLESNIMKPCFAASKIQAP-FSQWQVTIVNEM-RDSNMVVHCKSKDDDLGKRNLGAAAKFNWTFRENILQSTLFWCNFKSKHGKASGIVFWPE

Query:  KGKWLSEKCDDKNCIWVGGDQGIYL
            L  +CD KNC+W   + G+YL
Subjt:  KGKWLSEKCDDKNCIWVGGDQGIYL

Arabidopsis top hitse value%identityAlignment
AT4G16195.1 Plant self-incompatibility protein S1 family1.6e-1028.32Show/hide
Query:  PFSQWQVTIVNEMRDS-NMVVHCKSKDDDLGKRNLGAAAKFNWTFRENILQSTLFWCNFKSKHGKASGIVFWPEKGKWLSEKCDDKNCIWVGGDQGIYLH
        P S+  V I N++ +   ++ HCKSKDDDLG R L     ++++F       TL++C+F   +   S  ++   +      KC+   C+W     G    
Subjt:  PFSQWQVTIVNEMRDS-NMVVHCKSKDDDLGKRNLGAAAKFNWTFRENILQSTLFWCNFKSKHGKASGIVFWPEKGKWLSEKCDDKNCIWVGGDQGIYLH

Query:  LGPQRGFKFVYPW
            + F   YPW
Subjt:  LGPQRGFKFVYPW

AT4G16295.1 S-protein homologue 11.7e-2038.28Show/hide
Query:  LNVICYILLFGLESNIMKPCFAASKIQAP-FSQWQVTIVNEM-RDSNMVVHCKSKDDDLGKRNLGAAAKFNWTFRENILQSTLFWCNFKSKHGKASGIVF
        L  IC+ L    + +++        I  P  S+WQVT+VN +     + +HCKSK+DDLG+ NL    +F+W F EN+L ST FWC     +G  +  VF
Subjt:  LNVICYILLFGLESNIMKPCFAASKIQAP-FSQWQVTIVNEM-RDSNMVVHCKSKDDDLGKRNLGAAAKFNWTFRENILQSTLFWCNFKSKHGKASGIVF

Query:  WPEKGKWLSEKCDDKNCIWVGGDQGIYL
        W +    L  +C  KNCIW     G+YL
Subjt:  WPEKGKWLSEKCDDKNCIWVGGDQGIYL

AT4G29035.1 Plant self-incompatibility protein S1 family7.4e-2137.6Show/hide
Query:  ICYILLFGLESNIMKPCFAASKIQAP-FSQWQVTIVNEM-RDSNMVVHCKSKDDDLGKRNLGAAAKFNWTFRENILQSTLFWCNFKSKHGKASGIVFWPE
        IC+ L+   + +++        I  P  S+WQVT+ N +     + +HCKSK++DLG  NL    +F+W F EN+L STLFWC      G  +  VFW +
Subjt:  ICYILLFGLESNIMKPCFAASKIQAP-FSQWQVTIVNEM-RDSNMVVHCKSKDDDLGKRNLGAAAKFNWTFRENILQSTLFWCNFKSKHGKASGIVFWPE

Query:  KGKWLSEKCDDKNCIWVGGDQGIYL
            L  +CD KNC+W   + G+YL
Subjt:  KGKWLSEKCDDKNCIWVGGDQGIYL

AT5G04350.1 Plant self-incompatibility protein S1 family3.5e-1028.8Show/hide
Query:  NVICYILLFGLESNIMKPCFAASKIQAPFSQWQVTIVNEMRDSNMV-VHCKSKDDDLGKRNLGAAAKFNWTFRENILQSTLFWCNFKSKHGKASGIVFWP
        N+  + ++ GL       C   S       + +V + N++  S ++ VHC+SKDDDLG+  L     + +TF +NI Q+T F C           + F  
Subjt:  NVICYILLFGLESNIMKPCFAASKIQAPFSQWQVTIVNEMRDSNMV-VHCKSKDDDLGKRNLGAAAKFNWTFRENILQSTLFWCNFKSKHGKASGIVFWP

Query:  EKGKWLSEKCDDKNCIWVGGDQGIY
         +  W   K  + +C W+G + GIY
Subjt:  EKGKWLSEKCDDKNCIWVGGDQGIY

AT5G12070.1 Plant self-incompatibility protein S1 family2.2e-0928.95Show/hide
Query:  LNVICYILLFGLESNIMKPCFAASKIQAPFSQWQVTIVNEMRD-SNMVVHCKSKDDDLGKRNLGAAAKFNWTFRENILQS-TLFWCNFKSKHGKASGIVF
        ++V+   LL  +  + +KP    S ++    +  VTI N + D S + +HCKS DDDLG + L     +++ FR +I+   TLF+C+F            
Subjt:  LNVICYILLFGLESNIMKPCFAASKIQAPFSQWQVTIVNEMRD-SNMVVHCKSKDDDLGKRNLGAAAKFNWTFRENILQS-TLFWCNFKSKHGKASGIVF

Query:  WPEKGKWLSEKCDDKN----------CIWVGGDQGIYLHLGPQRGFKFVYPW
        WP + KW +   DD++          CIW  G  G          F   Y W
Subjt:  WPEKGKWLSEKCDDKN----------CIWVGGDQGIYLHLGPQRGFKFVYPW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGCCTCTAAACGTAATTTGTTACATCTTATTGTTTGGTTTGGAATCAAACATTATGAAGCCATGTTTTGCAGCATCAAAAATACAAGCTCCATTTTCCCAATGGCA
AGTGACCATTGTGAATGAGATGAGAGATTCGAATATGGTGGTTCACTGCAAGTCGAAAGACGACGATTTGGGCAAGCGCAATCTCGGTGCTGCAGCCAAATTCAACTGGA
CGTTTCGAGAAAATATTTTGCAATCAACACTATTTTGGTGCAATTTTAAGAGCAAACATGGAAAAGCTTCTGGTATTGTTTTCTGGCCAGAGAAAGGAAAATGGCTTAGT
GAAAAATGTGATGATAAGAACTGTATTTGGGTTGGTGGAGATCAAGGAATTTATTTGCATCTTGGTCCTCAAAGAGGCTTTAAATTCGTGTACCCATGGAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGCCTCTAAACGTAATTTGTTACATCTTATTGTTTGGTTTGGAATCAAACATTATGAAGCCATGTTTTGCAGCATCAAAAATACAAGCTCCATTTTCCCAATGGCA
AGTGACCATTGTGAATGAGATGAGAGATTCGAATATGGTGGTTCACTGCAAGTCGAAAGACGACGATTTGGGCAAGCGCAATCTCGGTGCTGCAGCCAAATTCAACTGGA
CGTTTCGAGAAAATATTTTGCAATCAACACTATTTTGGTGCAATTTTAAGAGCAAACATGGAAAAGCTTCTGGTATTGTTTTCTGGCCAGAGAAAGGAAAATGGCTTAGT
GAAAAATGTGATGATAAGAACTGTATTTGGGTTGGTGGAGATCAAGGAATTTATTTGCATCTTGGTCCTCAAAGAGGCTTTAAATTCGTGTACCCATGGAAATGA
Protein sequenceShow/hide protein sequence
MKPLNVICYILLFGLESNIMKPCFAASKIQAPFSQWQVTIVNEMRDSNMVVHCKSKDDDLGKRNLGAAAKFNWTFRENILQSTLFWCNFKSKHGKASGIVFWPEKGKWLS
EKCDDKNCIWVGGDQGIYLHLGPQRGFKFVYPWK