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Sed0027672 (gene) of Chayote v1 genome

Gene IDSed0027672
OrganismSechium edule (Chayote v1)
Description(thale cress) hypothetical protein
Genome locationLG14:4979816..4980124
RNA-Seq ExpressionSed0027672
SyntenySed0027672
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6595353.1 hypothetical protein SDJN03_11906, partial [Cucurbita argyrosperma subsp. sororia]2.1e-1961.47Show/hide
Query:  MARFLILLFIFANVVLSSAAVRAALPPIAGAEPPSGRKLGPPRSELKFHSAASGG-------VENGEHHKSRDKSIAGGGVILGGLATTFLVAVICYIRA
        MA FL LLFIFA+ +L SAAV         AEPPS RKLG   S     S+ S         +EN EHHKSRD SIAGGGVILGGLATTF VA+ICYIRA
Subjt:  MARFLILLFIFANVVLSSAAVRAALPPIAGAEPPSGRKLGPPRSELKFHSAASGG-------VENGEHHKSRDKSIAGGGVILGGLATTFLVAVICYIRA

Query:  TRRHNSEVK
        T+R NSEVK
Subjt:  TRRHNSEVK

KAG6603622.1 hypothetical protein SDJN03_04231, partial [Cucurbita argyrosperma subsp. sororia]2.6e-2261.86Show/hide
Query:  MARFLILLFIFANVVLSSAAVRAALPPIAGAEPPSGRKLG--------------PPRSELKFHSAASGG------VENGEHHKSRDKSIAGGGVILGGLA
        MA FL LLFIFAN +L S AV AA PP A AEPPSGRKLG               PRSE K  +A  GG      +EN EHHKS DKS+AGGGVILGGLA
Subjt:  MARFLILLFIFANVVLSSAAVRAALPPIAGAEPPSGRKLG--------------PPRSELKFHSAASGG------VENGEHHKSRDKSIAGGGVILGGLA

Query:  TTFLVAVICYIRATRRHN
        TTFLVA++CYIRATRR +
Subjt:  TTFLVAVICYIRATRRHN

KGN54308.1 hypothetical protein Csa_017945 [Cucumis sativus]3.5e-1959.5Show/hide
Query:  FLILLFIFANVVLSSAAVRAALPPIAGAEPPSGRKLG--------------PPRSELKFH--SAASGG-------VENGEHHKSRDKSIAGGGVILGGLA
        FL LLFIFAN + SS A  AA PP   AE PS RKLG               PRS +K    S ASGG       + N +HHKSRDKSIAGGGVILGGLA
Subjt:  FLILLFIFANVVLSSAAVRAALPPIAGAEPPSGRKLG--------------PPRSELKFH--SAASGG-------VENGEHHKSRDKSIAGGGVILGGLA

Query:  TTFLVAVICYIRATRRHNSEV
        TTFLVAVICYIRATRR  SE+
Subjt:  TTFLVAVICYIRATRRHNSEV

XP_008448528.1 PREDICTED: uncharacterized protein LOC103490675 [Cucumis melo]5.5e-2060.33Show/hide
Query:  FLILLFIFANVVLSSAAVRAALPPIAGAEPPSGRKLG--------------PPRSELKFH--SAASGG-------VENGEHHKSRDKSIAGGGVILGGLA
        FL LLFIFAN   SS A  AA PP   AE PS RKLG               PRSE+K    SAASGG       + N +HHKSRDKSIAGGGVILGGLA
Subjt:  FLILLFIFANVVLSSAAVRAALPPIAGAEPPSGRKLG--------------PPRSELKFH--SAASGG-------VENGEHHKSRDKSIAGGGVILGGLA

Query:  TTFLVAVICYIRATRRHNSEV
        TTFLVA+ICYIRATRR  SE+
Subjt:  TTFLVAVICYIRATRRHNSEV

XP_022151558.1 uncharacterized protein LOC111019472 [Momordica charantia]5.5e-2055.47Show/hide
Query:  MARFLILLFIFANVVLSSAAV-----RAALPPIA-GAEPPSGRKLG----------------PPRSELKFHSAASGGVENGEH----HKSRDKSIAGGGV
        MARFL +LFIFAN  L+S  V      AA  PI+ GAE PS RKLG                 PRSE+K  + ++     G+H    HK+ DKSIAGGGV
Subjt:  MARFLILLFIFANVVLSSAAV-----RAALPPIA-GAEPPSGRKLG----------------PPRSELKFHSAASGGVENGEH----HKSRDKSIAGGGV

Query:  ILGGLATTFLVAVICYIRATRRHNSEVK
        ILGGLATTFLVA+ICYIRATRR NSEVK
Subjt:  ILGGLATTFLVAVICYIRATRRHNSEVK

TrEMBL top hitse value%identityAlignment
A0A0A0KXQ0 Uncharacterized protein1.7e-1959.5Show/hide
Query:  FLILLFIFANVVLSSAAVRAALPPIAGAEPPSGRKLG--------------PPRSELKFH--SAASGG-------VENGEHHKSRDKSIAGGGVILGGLA
        FL LLFIFAN + SS A  AA PP   AE PS RKLG               PRS +K    S ASGG       + N +HHKSRDKSIAGGGVILGGLA
Subjt:  FLILLFIFANVVLSSAAVRAALPPIAGAEPPSGRKLG--------------PPRSELKFH--SAASGG-------VENGEHHKSRDKSIAGGGVILGGLA

Query:  TTFLVAVICYIRATRRHNSEV
        TTFLVAVICYIRATRR  SE+
Subjt:  TTFLVAVICYIRATRRHNSEV

A0A1J3F1D3 Uncharacterized protein3.8e-1162.5Show/hide
Query:  AEPPSGRKLGP---PR--SELKFHSAASGGVENGEHHKSRDKSIAGGGVILGGLATTFLVAVICYIRATRRH
        AEPP+ RKLG    PR  SE    S     V  G HH + D+S+AGGGVILGGLATTFLVAV CYIRATR+H
Subjt:  AEPPSGRKLGP---PR--SELKFHSAASGGVENGEHHKSRDKSIAGGGVILGGLATTFLVAVICYIRATRRH

A0A1S3BJV8 uncharacterized protein LOC1034906752.6e-2060.33Show/hide
Query:  FLILLFIFANVVLSSAAVRAALPPIAGAEPPSGRKLG--------------PPRSELKFH--SAASGG-------VENGEHHKSRDKSIAGGGVILGGLA
        FL LLFIFAN   SS A  AA PP   AE PS RKLG               PRSE+K    SAASGG       + N +HHKSRDKSIAGGGVILGGLA
Subjt:  FLILLFIFANVVLSSAAVRAALPPIAGAEPPSGRKLG--------------PPRSELKFH--SAASGG-------VENGEHHKSRDKSIAGGGVILGGLA

Query:  TTFLVAVICYIRATRRHNSEV
        TTFLVA+ICYIRATRR  SE+
Subjt:  TTFLVAVICYIRATRRHNSEV

A0A5A7TSM2 Uncharacterized protein2.6e-2060.33Show/hide
Query:  FLILLFIFANVVLSSAAVRAALPPIAGAEPPSGRKLG--------------PPRSELKFH--SAASGG-------VENGEHHKSRDKSIAGGGVILGGLA
        FL LLFIFAN   SS A  AA PP   AE PS RKLG               PRSE+K    SAASGG       + N +HHKSRDKSIAGGGVILGGLA
Subjt:  FLILLFIFANVVLSSAAVRAALPPIAGAEPPSGRKLG--------------PPRSELKFH--SAASGG-------VENGEHHKSRDKSIAGGGVILGGLA

Query:  TTFLVAVICYIRATRRHNSEV
        TTFLVA+ICYIRATRR  SE+
Subjt:  TTFLVAVICYIRATRRHNSEV

A0A6J1DCH7 uncharacterized protein LOC1110194722.6e-2055.47Show/hide
Query:  MARFLILLFIFANVVLSSAAV-----RAALPPIA-GAEPPSGRKLG----------------PPRSELKFHSAASGGVENGEH----HKSRDKSIAGGGV
        MARFL +LFIFAN  L+S  V      AA  PI+ GAE PS RKLG                 PRSE+K  + ++     G+H    HK+ DKSIAGGGV
Subjt:  MARFLILLFIFANVVLSSAAV-----RAALPPIA-GAEPPSGRKLG----------------PPRSELKFHSAASGGVENGEH----HKSRDKSIAGGGV

Query:  ILGGLATTFLVAVICYIRATRRHNSEVK
        ILGGLATTFLVA+ICYIRATRR NSEVK
Subjt:  ILGGLATTFLVAVICYIRATRRHNSEVK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G09280.1 unknown protein1.2e-1245.54Show/hide
Query:  ARFLILLFIFANVVLSSAAVRAALPPIAGAEPPSGRKLG-----PPRSELKFHSAASGGVENGEHHKSRDKSIAGGGVILGGLATTFLVAVICYIRATRR
        A+ ++L F+   V   +AA        + AEPP+ RKLG        +E    S     V  G HH + ++S+AGGGVILGGLATTFLV V CYIRATR+
Subjt:  ARFLILLFIFANVVLSSAAVRAALPPIAGAEPPSGRKLG-----PPRSELKFHSAASGGVENGEHHKSRDKSIAGGGVILGGLATTFLVAVICYIRATRR

Query:  H
        H
Subjt:  H


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCGATTTCTGATTCTTCTCTTTATCTTCGCCAATGTTGTCCTCAGTTCAGCCGCCGTTCGAGCCGCTCTGCCACCGATCGCTGGAGCCGAACCGCCTTCTGGCAG
AAAGCTCGGGCCACCGCGTAGCGAATTAAAATTTCACTCCGCGGCGAGTGGCGGAGTAGAGAATGGTGAGCATCACAAGTCGAGAGATAAGTCAATTGCCGGCGGTGGAG
TCATATTGGGGGGACTTGCCACCACTTTTCTTGTGGCTGTTATTTGTTACATTAGAGCTACAAGGCGACATAATTCCGAAGTAAAATAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTCGATTTCTGATTCTTCTCTTTATCTTCGCCAATGTTGTCCTCAGTTCAGCCGCCGTTCGAGCCGCTCTGCCACCGATCGCTGGAGCCGAACCGCCTTCTGGCAG
AAAGCTCGGGCCACCGCGTAGCGAATTAAAATTTCACTCCGCGGCGAGTGGCGGAGTAGAGAATGGTGAGCATCACAAGTCGAGAGATAAGTCAATTGCCGGCGGTGGAG
TCATATTGGGGGGACTTGCCACCACTTTTCTTGTGGCTGTTATTTGTTACATTAGAGCTACAAGGCGACATAATTCCGAAGTAAAATAA
Protein sequenceShow/hide protein sequence
MARFLILLFIFANVVLSSAAVRAALPPIAGAEPPSGRKLGPPRSELKFHSAASGGVENGEHHKSRDKSIAGGGVILGGLATTFLVAVICYIRATRRHNSEVK