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Sed0027681 (gene) of Chayote v1 genome

Gene IDSed0027681
OrganismSechium edule (Chayote v1)
DescriptionNADH-ubiquinone reductase complex 1 MLRQ subunit
Genome locationLG03:42202639..42203324
RNA-Seq ExpressionSed0027681
SyntenySed0027681
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsIPR010530 - NADH-ubiquinone reductase complex 1 MLRQ subunit


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004142944.1 uncharacterized protein LOC101222643 [Cucumis sativus]2.3e-3173.27Show/hide
Query:  MATANRWLKPEVSFFSLSFSIAFCVPSLCCSGCDVAICGMQLVRNITSNPVVRVIKEKRAAGILDNFEEGEKYAEHGLRKFLRTRTPQIMPSINKFFSDP
        MATANRWLKPEV             P     G  V IC MQLVRNIT+NP VRVIKE+RAAG+LDNFEEGEKYAEHGLRKFLRTR PQIMPSINKFFSDP
Subjt:  MATANRWLKPEVSFFSLSFSIAFCVPSLCCSGCDVAICGMQLVRNITSNPVVRVIKEKRAAGILDNFEEGEKYAEHGLRKFLRTRTPQIMPSINKFFSDP

Query:  N
        N
Subjt:  N
XP_022131738.1 uncharacterized protein LOC111004829 [Momordica charantia]1.0e-3173.27Show/hide
Query:  MATANRWLKPEVSFFSLSFSIAFCVPSLCCSGCDVAICGMQLVRNITSNPVVRVIKEKRAAGILDNFEEGEKYAEHGLRKFLRTRTPQIMPSINKFFSDP
        MA  NRWLKPEV             P     G  V ICGMQLVRNIT+NP VRVIKEKRAAG+LDNFEEGEKYAEHGLRKFLRTR+PQIMPSINKFFSDP
Subjt:  MATANRWLKPEVSFFSLSFSIAFCVPSLCCSGCDVAICGMQLVRNITSNPVVRVIKEKRAAGILDNFEEGEKYAEHGLRKFLRTRTPQIMPSINKFFSDP

Query:  N
        N
Subjt:  N
XP_022961943.1 uncharacterized protein LOC111462563 [Cucurbita moschata]1.8e-3173.27Show/hide
Query:  MATANRWLKPEVSFFSLSFSIAFCVPSLCCSGCDVAICGMQLVRNITSNPVVRVIKEKRAAGILDNFEEGEKYAEHGLRKFLRTRTPQIMPSINKFFSDP
        MATANRWLKPEV             P     G  V ICGMQLVRNIT+NP VRV KE+RAAG+LDNFEEGEKYAEHGLRKFLRTR PQIMPSINKFFSDP
Subjt:  MATANRWLKPEVSFFSLSFSIAFCVPSLCCSGCDVAICGMQLVRNITSNPVVRVIKEKRAAGILDNFEEGEKYAEHGLRKFLRTRTPQIMPSINKFFSDP

Query:  N
        N
Subjt:  N
XP_023545968.1 uncharacterized protein LOC111805233 [Cucurbita pepo subsp. pepo]4.0e-3172.28Show/hide
Query:  MATANRWLKPEVSFFSLSFSIAFCVPSLCCSGCDVAICGMQLVRNITSNPVVRVIKEKRAAGILDNFEEGEKYAEHGLRKFLRTRTPQIMPSINKFFSDP
        MATANRWLKPEV             P     G  V ICGMQLVRNIT+NP VRV K++RAAG+LDNFEEGEKYAEHGLRKFLRTR PQIMPSINKFFSDP
Subjt:  MATANRWLKPEVSFFSLSFSIAFCVPSLCCSGCDVAICGMQLVRNITSNPVVRVIKEKRAAGILDNFEEGEKYAEHGLRKFLRTRTPQIMPSINKFFSDP

Query:  N
        N
Subjt:  N
XP_038885463.1 uncharacterized protein LOC120075838 [Benincasa hispida]3.1e-3172.28Show/hide
Query:  MATANRWLKPEVSFFSLSFSIAFCVPSLCCSGCDVAICGMQLVRNITSNPVVRVIKEKRAAGILDNFEEGEKYAEHGLRKFLRTRTPQIMPSINKFFSDP
        MA+ANRWLKPEV             P     G  V ICGMQLVRNIT+NP VRVIKEKR AG+LDN+EEGEKYAEHGLRKFLRTR PQIMPSINKFFSDP
Subjt:  MATANRWLKPEVSFFSLSFSIAFCVPSLCCSGCDVAICGMQLVRNITSNPVVRVIKEKRAAGILDNFEEGEKYAEHGLRKFLRTRTPQIMPSINKFFSDP

Query:  N
        N
Subjt:  N
TrEMBL top hitse value%identityAlignment
A0A0A0LMX7 Uncharacterized protein1.1e-3173.27Show/hide
Query:  MATANRWLKPEVSFFSLSFSIAFCVPSLCCSGCDVAICGMQLVRNITSNPVVRVIKEKRAAGILDNFEEGEKYAEHGLRKFLRTRTPQIMPSINKFFSDP
        MATANRWLKPEV             P     G  V IC MQLVRNIT+NP VRVIKE+RAAG+LDNFEEGEKYAEHGLRKFLRTR PQIMPSINKFFSDP
Subjt:  MATANRWLKPEVSFFSLSFSIAFCVPSLCCSGCDVAICGMQLVRNITSNPVVRVIKEKRAAGILDNFEEGEKYAEHGLRKFLRTRTPQIMPSINKFFSDP

Query:  N
        N
Subjt:  N
A0A1S4DVM4 uncharacterized protein LOC1079907232.5e-3173.27Show/hide
Query:  MATANRWLKPEVSFFSLSFSIAFCVPSLCCSGCDVAICGMQLVRNITSNPVVRVIKEKRAAGILDNFEEGEKYAEHGLRKFLRTRTPQIMPSINKFFSDP
        MATANRWLKPEV             P     G  V IC MQLVRNIT+NP VRVIKE+RAAG+LDNFEEGEKYAEHGLRKFLRTR PQIMPSINKFFSDP
Subjt:  MATANRWLKPEVSFFSLSFSIAFCVPSLCCSGCDVAICGMQLVRNITSNPVVRVIKEKRAAGILDNFEEGEKYAEHGLRKFLRTRTPQIMPSINKFFSDP

Query:  N
        N
Subjt:  N
A0A6A2Z9I1 Mitotic spindle checkpoint protein MAD2-like1.2e-2868.32Show/hide
Query:  MATANRWLKPEVSFFSLSFSIAFCVPSLCCSGCDVAICGMQLVRNITSNPVVRVIKEKRAAGILDNFEEGEKYAEHGLRKFLRTRTPQIMPSINKFFSDP
        MA+ANRWL+PEV     S S+A            V IC MQLVRNIT+NP VRV KEKRAAGIL+NFEEGEKYAEHGLRKF+R R PQIMPS+N FFSDP
Subjt:  MATANRWLKPEVSFFSLSFSIAFCVPSLCCSGCDVAICGMQLVRNITSNPVVRVIKEKRAAGILDNFEEGEKYAEHGLRKFLRTRTPQIMPSINKFFSDP

Query:  N
        N
Subjt:  N
A0A6J1BUB6 uncharacterized protein LOC1110048295.1e-3273.27Show/hide
Query:  MATANRWLKPEVSFFSLSFSIAFCVPSLCCSGCDVAICGMQLVRNITSNPVVRVIKEKRAAGILDNFEEGEKYAEHGLRKFLRTRTPQIMPSINKFFSDP
        MA  NRWLKPEV             P     G  V ICGMQLVRNIT+NP VRVIKEKRAAG+LDNFEEGEKYAEHGLRKFLRTR+PQIMPSINKFFSDP
Subjt:  MATANRWLKPEVSFFSLSFSIAFCVPSLCCSGCDVAICGMQLVRNITSNPVVRVIKEKRAAGILDNFEEGEKYAEHGLRKFLRTRTPQIMPSINKFFSDP

Query:  N
        N
Subjt:  N
A0A6J1HDB5 uncharacterized protein LOC1114625638.7e-3273.27Show/hide
Query:  MATANRWLKPEVSFFSLSFSIAFCVPSLCCSGCDVAICGMQLVRNITSNPVVRVIKEKRAAGILDNFEEGEKYAEHGLRKFLRTRTPQIMPSINKFFSDP
        MATANRWLKPEV             P     G  V ICGMQLVRNIT+NP VRV KE+RAAG+LDNFEEGEKYAEHGLRKFLRTR PQIMPSINKFFSDP
Subjt:  MATANRWLKPEVSFFSLSFSIAFCVPSLCCSGCDVAICGMQLVRNITSNPVVRVIKEKRAAGILDNFEEGEKYAEHGLRKFLRTRTPQIMPSINKFFSDP

Query:  N
        N
Subjt:  N
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G29970.1 B12D protein2.7e-1747.31Show/hide
Query:  RWLKPEVSFFSLSFSIAFCVPSLCCSGCDVAICGMQLVRNITSNPVVRVIKEKRAAGILDNFEEGEKYAEHGLRKFLRTRTPQIMPSINKFFS
        RW++PEV             P L   G   ++   QL RN   NP  R+ KE R  GIL+N +EGEKYA+H  RK+LRTR PQ+MPS+N+FFS
Subjt:  RWLKPEVSFFSLSFSIAFCVPSLCCSGCDVAICGMQLVRNITSNPVVRVIKEKRAAGILDNFEEGEKYAEHGLRKFLRTRTPQIMPSINKFFS
AT3G48140.1 B12D protein2.5e-2353.61Show/hide
Query:  ANRWLKPEVSFFSLSFSIAFCVPSLCCSGCDVAICGMQLVRNITSNPVVRVIKEKRAAGILDNFEEGEKYAEHGLRKFLRTRTPQIMPSINKFFSDP
        A+RWL+PEV             P    +G  V IC   L+RNIT NP VR  KE RAAGILDN  EGEKY E+ LRKF+R + P+IMP +NKFF+DP
Subjt:  ANRWLKPEVSFFSLSFSIAFCVPSLCCSGCDVAICGMQLVRNITSNPVVRVIKEKRAAGILDNFEEGEKYAEHGLRKFLRTRTPQIMPSINKFFSDP

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCACAGCCAACAGATGGTTAAAGCCTGAGGTTTCATTCTTTTCCCTTTCATTTTCCATTGCTTTCTGTGTACCCTCTCTTTGCTGCAGTGGGTGCGACGTTGCCAT
CTGTGGGATGCAGCTTGTTAGAAACATAACCTCCAACCCTGTAGTCAGGGTTATCAAAGAGAAGAGAGCTGCAGGAATTCTTGACAACTTTGAAGAAGGTGAGAAGTACG
CAGAGCATGGCCTTAGGAAGTTCCTCAGAACAAGAACCCCTCAGATTATGCCTTCCATCAACAAATTCTTCTCAGATCCAAACTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCCACAGCCAACAGATGGTTAAAGCCTGAGGTTTCATTCTTTTCCCTTTCATTTTCCATTGCTTTCTGTGTACCCTCTCTTTGCTGCAGTGGGTGCGACGTTGCCAT
CTGTGGGATGCAGCTTGTTAGAAACATAACCTCCAACCCTGTAGTCAGGGTTATCAAAGAGAAGAGAGCTGCAGGAATTCTTGACAACTTTGAAGAAGGTGAGAAGTACG
CAGAGCATGGCCTTAGGAAGTTCCTCAGAACAAGAACCCCTCAGATTATGCCTTCCATCAACAAATTCTTCTCAGATCCAAACTAA
Protein sequenceShow/hide protein sequence
MATANRWLKPEVSFFSLSFSIAFCVPSLCCSGCDVAICGMQLVRNITSNPVVRVIKEKRAAGILDNFEEGEKYAEHGLRKFLRTRTPQIMPSINKFFSDPN