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Sed0027689 (gene) of Chayote v1 genome

Gene IDSed0027689
OrganismSechium edule (Chayote v1)
DescriptionAlways early, putative isoform 3
Genome locationLG12:5056555..5057305
RNA-Seq ExpressionSed0027689
SyntenySed0027689
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022936768.1 protein ALWAYS EARLY 3-like isoform X3 [Cucurbita moschata]2.4e-1442.65Show/hide
Query:  MSTKFRCSEMDEGGCELSLGSTRADNADYELGKNTREIHKK-----------------------------------------------------------
        MSTKFRCSEMDEGGCELSLGST ADNADY+ GKNTREI +K                                                           
Subjt:  MSTKFRCSEMDEGGCELSLGSTRADNADYELGKNTREIHKK-----------------------------------------------------------

Query:  ----------DECSAFDALQTLADVFLMMQDATADT
                  DECSAFDALQTLAD+ LMM D TADT
Subjt:  ----------DECSAFDALQTLADVFLMMQDATADT

XP_022936778.1 protein ALWAYS EARLY 3-like isoform X4 [Cucurbita moschata]2.4e-1442.65Show/hide
Query:  MSTKFRCSEMDEGGCELSLGSTRADNADYELGKNTREIHKK-----------------------------------------------------------
        MSTKFRCSEMDEGGCELSLGST ADNADY+ GKNTREI +K                                                           
Subjt:  MSTKFRCSEMDEGGCELSLGSTRADNADYELGKNTREIHKK-----------------------------------------------------------

Query:  ----------DECSAFDALQTLADVFLMMQDATADT
                  DECSAFDALQTLAD+ LMM D TADT
Subjt:  ----------DECSAFDALQTLADVFLMMQDATADT

XP_022973710.1 protein ALWAYS EARLY 3-like isoform X2 [Cucurbita maxima]2.4e-1442.65Show/hide
Query:  MSTKFRCSEMDEGGCELSLGSTRADNADYELGKNTREIHKK-----------------------------------------------------------
        MSTKFRCSEMDEGGCELSLGST ADNADY+ GKNTREI +K                                                           
Subjt:  MSTKFRCSEMDEGGCELSLGSTRADNADYELGKNTREIHKK-----------------------------------------------------------

Query:  ----------DECSAFDALQTLADVFLMMQDATADT
                  DECSAFDALQTLAD+ LMM D TADT
Subjt:  ----------DECSAFDALQTLADVFLMMQDATADT

XP_022973711.1 protein ALWAYS EARLY 3-like isoform X3 [Cucurbita maxima]2.4e-1442.65Show/hide
Query:  MSTKFRCSEMDEGGCELSLGSTRADNADYELGKNTREIHKK-----------------------------------------------------------
        MSTKFRCSEMDEGGCELSLGST ADNADY+ GKNTREI +K                                                           
Subjt:  MSTKFRCSEMDEGGCELSLGSTRADNADYELGKNTREIHKK-----------------------------------------------------------

Query:  ----------DECSAFDALQTLADVFLMMQDATADT
                  DECSAFDALQTLAD+ LMM D TADT
Subjt:  ----------DECSAFDALQTLADVFLMMQDATADT

XP_023539796.1 protein ALWAYS EARLY 3-like isoform X2 [Cucurbita pepo subsp. pepo]2.4e-1442.65Show/hide
Query:  MSTKFRCSEMDEGGCELSLGSTRADNADYELGKNTREIHKK-----------------------------------------------------------
        MSTKFRCSEMDEGGCELSLGST ADNADY+ GKNTREI +K                                                           
Subjt:  MSTKFRCSEMDEGGCELSLGSTRADNADYELGKNTREIHKK-----------------------------------------------------------

Query:  ----------DECSAFDALQTLADVFLMMQDATADT
                  DECSAFDALQTLAD+ LMM D TADT
Subjt:  ----------DECSAFDALQTLADVFLMMQDATADT

TrEMBL top hitse value%identityAlignment
A0A6J1FEN0 protein ALWAYS EARLY 3-like isoform X21.2e-1442.65Show/hide
Query:  MSTKFRCSEMDEGGCELSLGSTRADNADYELGKNTREIHKK-----------------------------------------------------------
        MSTKFRCSEMDEGGCELSLGST ADNADY+ GKNTREI +K                                                           
Subjt:  MSTKFRCSEMDEGGCELSLGSTRADNADYELGKNTREIHKK-----------------------------------------------------------

Query:  ----------DECSAFDALQTLADVFLMMQDATADT
                  DECSAFDALQTLAD+ LMM D TADT
Subjt:  ----------DECSAFDALQTLADVFLMMQDATADT

A0A6J1I8A2 protein ALWAYS EARLY 3-like isoform X41.2e-1442.65Show/hide
Query:  MSTKFRCSEMDEGGCELSLGSTRADNADYELGKNTREIHKK-----------------------------------------------------------
        MSTKFRCSEMDEGGCELSLGST ADNADY+ GKNTREI +K                                                           
Subjt:  MSTKFRCSEMDEGGCELSLGSTRADNADYELGKNTREIHKK-----------------------------------------------------------

Query:  ----------DECSAFDALQTLADVFLMMQDATADT
                  DECSAFDALQTLAD+ LMM D TADT
Subjt:  ----------DECSAFDALQTLADVFLMMQDATADT

A0A6J1I9E0 protein ALWAYS EARLY 3-like isoform X31.2e-1442.65Show/hide
Query:  MSTKFRCSEMDEGGCELSLGSTRADNADYELGKNTREIHKK-----------------------------------------------------------
        MSTKFRCSEMDEGGCELSLGST ADNADY+ GKNTREI +K                                                           
Subjt:  MSTKFRCSEMDEGGCELSLGSTRADNADYELGKNTREIHKK-----------------------------------------------------------

Query:  ----------DECSAFDALQTLADVFLMMQDATADT
                  DECSAFDALQTLAD+ LMM D TADT
Subjt:  ----------DECSAFDALQTLADVFLMMQDATADT

A0A6J1IC18 protein ALWAYS EARLY 3-like isoform X21.2e-1442.65Show/hide
Query:  MSTKFRCSEMDEGGCELSLGSTRADNADYELGKNTREIHKK-----------------------------------------------------------
        MSTKFRCSEMDEGGCELSLGST ADNADY+ GKNTREI +K                                                           
Subjt:  MSTKFRCSEMDEGGCELSLGSTRADNADYELGKNTREIHKK-----------------------------------------------------------

Query:  ----------DECSAFDALQTLADVFLMMQDATADT
                  DECSAFDALQTLAD+ LMM D TADT
Subjt:  ----------DECSAFDALQTLADVFLMMQDATADT

A0A6J1IFF8 protein ALWAYS EARLY 3-like isoform X11.2e-1442.65Show/hide
Query:  MSTKFRCSEMDEGGCELSLGSTRADNADYELGKNTREIHKK-----------------------------------------------------------
        MSTKFRCSEMDEGGCELSLGST ADNADY+ GKNTREI +K                                                           
Subjt:  MSTKFRCSEMDEGGCELSLGSTRADNADYELGKNTREIHKK-----------------------------------------------------------

Query:  ----------DECSAFDALQTLADVFLMMQDATADT
                  DECSAFDALQTLAD+ LMM D TADT
Subjt:  ----------DECSAFDALQTLADVFLMMQDATADT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTACGAAGTTTCGATGTAGTGAAATGGATGAAGGTGGTTGTGAATTAAGCTTAGGAAGCACGAGAGCTGATAATGCAGACTATGAGCTTGGAAAAAATACTCGTGA
GATTCACAAAAAGGATGAATGCTCAGCATTTGATGCACTGCAAACTTTAGCTGATGTGTTTCTGATGATGCAAGACGCTACTGCTGATACTGGTAAAAATTATTCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGTACGAAGTTTCGATGTAGTGAAATGGATGAAGGTGGTTGTGAATTAAGCTTAGGAAGCACGAGAGCTGATAATGCAGACTATGAGCTTGGAAAAAATACTCGTGA
GATTCACAAAAAGGATGAATGCTCAGCATTTGATGCACTGCAAACTTTAGCTGATGTGTTTCTGATGATGCAAGACGCTACTGCTGATACTGGTAAAAATTATTCTTGA
Protein sequenceShow/hide protein sequence
MSTKFRCSEMDEGGCELSLGSTRADNADYELGKNTREIHKKDECSAFDALQTLADVFLMMQDATADTGKNYS