CuGenDBv2

Gene ID	Sed0027721
Organism	Sechium edule (Chayote v1)
Description	26.5 kDa heat shock protein, mitochondrial
Genome location	LG05:28224007..28224443
RNA-Seq Expression	Sed0027721
Synteny	Sed0027721
Gene Ontology terms	NA
InterPro domains	IPR008978 - HSP20-like chaperone

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6581923.1 26.5 kDa heat shock protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]

1.5e-14

40.34

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Query:  FSDQSSEG--------NESKSTKISPKSQGSKKWLWRNNNGGECYLGNSLMHAAENKQGV-----------------------EELEHEPSMVATEDVKV
        F DQSSEG        NE K+TK+ PK +G KKW+    NG E  +GNSLM AAEN   V                        +L+ E   +  EDVKV
Subjt:  FSDQSSEG--------NESKSTKISPKSQGSKKWLWRNNNGGECYLGNSLMHAAENKQGV-----------------------EELEHEPSMVATEDVKV

Query:  TVEGRVLSIRGEHREEEGDGGELW----------LLRHCRGAAGDE-----RWGVLVVTVPRTEKSPKEVKEVTIV
         VEGR+LSIRGEHREE+ +    W           +     A  DE     + GVL +T+PRTE  PK+VKE+T+V
Subjt:  TVEGRVLSIRGEHREEEGDGGELW----------LLRHCRGAAGDE-----RWGVLVVTVPRTEKSPKEVKEVTIV

XP_004152349.1 26.5 kDa heat shock protein, mitochondrial [Cucumis sativus]

7.6e-14

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Query:  SDQSSEGN-------ESKSTKISPKSQGSKKWL-WRNNNGGECYLGNSLMHAAEN-----------------------KQGVEELEHEPSMVATEDVKVT
        SDQSSEGN         ++TKI+PK +G KKW+ WR N  GE +LGNSLM AAE+                       ++   +L  E   +A ++VKVT
Subjt:  SDQSSEGN-------ESKSTKISPKSQGSKKWL-WRNNNGGECYLGNSLMHAAEN-----------------------KQGVEELEHEPSMVATEDVKVT

Query:  VEGRVLSIRGEHREEEGDGGELWLLRHC----------RGAAGDE-----RWGVLVVTVPRTEKSPKEVKEVTIV
        VEGR+L+IRGEHREEE +  +                   A  +E     + GVL +T+PRTEK PK+VKE+T+V
Subjt:  VEGRVLSIRGEHREEEGDGGELWLLRHC----------RGAAGDE-----RWGVLVVTVPRTEKSPKEVKEVTIV

XP_008454491.1 PREDICTED: 26.5 kDa heat shock protein, mitochondrial [Cucumis melo]

1.4e-15

41.24

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Query:  FSDQSSEG--------NESKSTKISPKSQGSKKWL-WRNNNGGECYLGNSLMHAAEN-----------------------KQGVEELEHEPSMVATEDVK
        F DQSSEG        NE K+TKI+PK +G KKW+ WR N  GE +LGNSLM AAE+                       ++   +L  E   +A ++VK
Subjt:  FSDQSSEG--------NESKSTKISPKSQGSKKWL-WRNNNGGECYLGNSLMHAAEN-----------------------KQGVEELEHEPSMVATEDVK

Query:  VTVEGRVLSIRGEHREEEGDGGELWLLRHC----------RGAAGDE-----RWGVLVVTVPRTEKSPKEVKEVTIV
        VTVEGR+L+IRGEHREEE +  E                   A  +E     + GVL +T+PRTEK PK+VKE+T+V
Subjt:  VTVEGRVLSIRGEHREEEGDGGELWLLRHC----------RGAAGDE-----RWGVLVVTVPRTEKSPKEVKEVTIV

XP_022979416.1 26.5 kDa heat shock protein, mitochondrial [Cucurbita maxima]

7.6e-14

39.77

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Query:  FSDQSSEG--------NESKSTKISPKSQGSKKWLWRNNNGGECYLGNSLMHAAENKQGV-----------------------EELEHEPSMVATEDVKV
        F DQSSEG        NE K+TK+ PK +G KKW+    NG E  +GNSLM AAEN   V                        +L  E   +  EDVKV
Subjt:  FSDQSSEG--------NESKSTKISPKSQGSKKWLWRNNNGGECYLGNSLMHAAENKQGV-----------------------EELEHEPSMVATEDVKV

Query:  TVEGRVLSIRGEHREEEGDGGELW----------LLRHCRGAAGDE-----RWGVLVVTVPRTEKSPKEVKEVTIV
         VEGR+LSIRGEH EE+ +    W           +     A  DE     + GVL +T+PRTE  PK+VKE+T+V
Subjt:  TVEGRVLSIRGEHREEEGDGGELW----------LLRHCRGAAGDE-----RWGVLVVTVPRTEKSPKEVKEVTIV

XP_023526860.1 LOW QUALITY PROTEIN: 26.5 kDa heat shock protein, mitochondrial [Cucurbita pepo subsp. pepo]

1.5e-14

39.77

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Query:  FSDQSSEG--------NESKSTKISPKSQGSKKWLWRNNNGGECYLGNSLMHAAEN-----------------------KQGVEELEHEPSMVATEDVKV
        F DQSSEG        NE K+TK+ PK +G KKW+    NG E  +GNSLM AAEN                       ++   +L+ E   +A EDVKV
Subjt:  FSDQSSEG--------NESKSTKISPKSQGSKKWLWRNNNGGECYLGNSLMHAAEN-----------------------KQGVEELEHEPSMVATEDVKV

Query:  TVEGRVLSIRGEHREEEGDGGELW----------LLRHCRGAAGDE-----RWGVLVVTVPRTEKSPKEVKEVTIV
         VEGR+LSIRGEH EE+ +    W           +     A  DE     + GVL +T+PRTE  PK+VKE+T+V
Subjt:  TVEGRVLSIRGEHREEEGDGGELW----------LLRHCRGAAGDE-----RWGVLVVTVPRTEKSPKEVKEVTIV

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KYF8 SHSP domain-containing protein

3.7e-14

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Query:  SDQSSEGN-------ESKSTKISPKSQGSKKWL-WRNNNGGECYLGNSLMHAAEN-----------------------KQGVEELEHEPSMVATEDVKVT
        SDQSSEGN         ++TKI+PK +G KKW+ WR N  GE +LGNSLM AAE+                       ++   +L  E   +A ++VKVT
Subjt:  SDQSSEGN-------ESKSTKISPKSQGSKKWL-WRNNNGGECYLGNSLMHAAEN-----------------------KQGVEELEHEPSMVATEDVKVT

Query:  VEGRVLSIRGEHREEEGDGGELWLLRHC----------RGAAGDE-----RWGVLVVTVPRTEKSPKEVKEVTIV
        VEGR+L+IRGEHREEE +  +                   A  +E     + GVL +T+PRTEK PK+VKE+T+V
Subjt:  VEGRVLSIRGEHREEEGDGGELWLLRHC----------RGAAGDE-----RWGVLVVTVPRTEKSPKEVKEVTIV

A0A1S3BYA0 26.5 kDa heat shock protein, mitochondrial

6.7e-16

41.24

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Query:  FSDQSSEG--------NESKSTKISPKSQGSKKWL-WRNNNGGECYLGNSLMHAAEN-----------------------KQGVEELEHEPSMVATEDVK
        F DQSSEG        NE K+TKI+PK +G KKW+ WR N  GE +LGNSLM AAE+                       ++   +L  E   +A ++VK
Subjt:  FSDQSSEG--------NESKSTKISPKSQGSKKWL-WRNNNGGECYLGNSLMHAAEN-----------------------KQGVEELEHEPSMVATEDVK

Query:  VTVEGRVLSIRGEHREEEGDGGELWLLRHC----------RGAAGDE-----RWGVLVVTVPRTEKSPKEVKEVTIV
        VTVEGR+L+IRGEHREEE +  E                   A  +E     + GVL +T+PRTEK PK+VKE+T+V
Subjt:  VTVEGRVLSIRGEHREEEGDGGELWLLRHC----------RGAAGDE-----RWGVLVVTVPRTEKSPKEVKEVTIV

A0A5A7TMA9 26.5 kDa heat shock protein

6.7e-16

41.24

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Query:  FSDQSSEG--------NESKSTKISPKSQGSKKWL-WRNNNGGECYLGNSLMHAAEN-----------------------KQGVEELEHEPSMVATEDVK
        F DQSSEG        NE K+TKI+PK +G KKW+ WR N  GE +LGNSLM AAE+                       ++   +L  E   +A ++VK
Subjt:  FSDQSSEG--------NESKSTKISPKSQGSKKWL-WRNNNGGECYLGNSLMHAAEN-----------------------KQGVEELEHEPSMVATEDVK

Query:  VTVEGRVLSIRGEHREEEGDGGELWLLRHC----------RGAAGDE-----RWGVLVVTVPRTEKSPKEVKEVTIV
        VTVEGR+L+IRGEHREEE +  E                   A  +E     + GVL +T+PRTEK PK+VKE+T+V
Subjt:  VTVEGRVLSIRGEHREEEGDGGELWLLRHC----------RGAAGDE-----RWGVLVVTVPRTEKSPKEVKEVTIV

A0A6J1GVM4 26.5 kDa heat shock protein, mitochondrial isoform X1

1.1e-13

39.2

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Query:  FSDQSSEG--------NESKSTKISPKSQGSKKWLWRNNNGGECYLGNSLMHAAENKQGV-----------------------EELEHEPSMVATEDVKV
        F DQSSEG        NE K+TK+ PK +G K+W+    NG E  +GNSLM AAEN   V                        +L  E   +  EDVKV
Subjt:  FSDQSSEG--------NESKSTKISPKSQGSKKWLWRNNNGGECYLGNSLMHAAENKQGV-----------------------EELEHEPSMVATEDVKV

Query:  TVEGRVLSIRGEHREEEGDGGELW----------LLRHCRGAAGDE-----RWGVLVVTVPRTEKSPKEVKEVTIV
         VEGR+LSIRGEH EE+ +    W           +     A  DE     + GVL +T+PRTE  PK+VKE+T+V
Subjt:  TVEGRVLSIRGEHREEEGDGGELW----------LLRHCRGAAGDE-----RWGVLVVTVPRTEKSPKEVKEVTIV

A0A6J1IQQ6 26.5 kDa heat shock protein, mitochondrial

3.7e-14

39.77

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Query:  FSDQSSEG--------NESKSTKISPKSQGSKKWLWRNNNGGECYLGNSLMHAAENKQGV-----------------------EELEHEPSMVATEDVKV
        F DQSSEG        NE K+TK+ PK +G KKW+    NG E  +GNSLM AAEN   V                        +L  E   +  EDVKV
Subjt:  FSDQSSEG--------NESKSTKISPKSQGSKKWLWRNNNGGECYLGNSLMHAAENKQGV-----------------------EELEHEPSMVATEDVKV

Query:  TVEGRVLSIRGEHREEEGDGGELW----------LLRHCRGAAGDE-----RWGVLVVTVPRTEKSPKEVKEVTIV
         VEGR+LSIRGEH EE+ +    W           +     A  DE     + GVL +T+PRTE  PK+VKE+T+V
Subjt:  TVEGRVLSIRGEHREEEGDGGELW----------LLRHCRGAAGDE-----RWGVLVVTVPRTEKSPKEVKEVTIV

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G52560.1 HSP20-like chaperones superfamily protein

2.0e-04

24.42

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Query:  NESKSTKISPKSQGSKKWLWRNNNGGECY-----------LGNSLMHAAENKQGV---------------------EELEHEPSMVATEDVKVTVEGRVL
        +E KS + +   +  +K LWRN +    +           +GN+L+ A EN   +                      +L +E   +  EDVK+TV   +L
Subjt:  NESKSTKISPKSQGSKKWLWRNNNGGECY-----------LGNSLMHAAENKQGV---------------------EELEHEPSMVATEDVKVTVEGRVL

Query:  SIRGEHREEEGDGG----ELWLLR---------------HCRGAAGDERWGVLVVTVPRTEKSPKEVKEVTI
        +I+G+H+ EE  G     E W  +                      + + GVL + +PRTEK  K V+E+++
Subjt:  SIRGEHREEEGDGG----ELWLLR---------------HCRGAAGDERWGVLVVTVPRTEKSPKEVKEVTI

AT1G52560.2 HSP20-like chaperones superfamily protein

6.8e-05

25.45

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Query:  NESKSTKISPKSQGSKKWLWRNNNGGECYL----GNSLMHAAENKQGV---------------------EELEHEPSMVATEDVKVTVEGRVLSIRGEHR
        +E KS + +   +  +K LWRN +    +     GN+L+ A EN   +                      +L +E   +  EDVK+TV   +L+I+G+H+
Subjt:  NESKSTKISPKSQGSKKWLWRNNNGGECYL----GNSLMHAAENKQGV---------------------EELEHEPSMVATEDVKVTVEGRVLSIRGEHR

Query:  EEEGDGG----ELWLLR---------------HCRGAAGDERWGVLVVTVPRTEKSPKEVKEVTI
         EE  G     E W  +                      + + GVL + +PRTEK  K V+E+++
Subjt:  EEEGDGG----ELWLLR---------------HCRGAAGDERWGVLVVTVPRTEKSPKEVKEVTI

Sequences

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CDS sequence

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ATGGATTTCTCTGATCAGAGCTCAGAAGGGAATGAATCTAAAAGCACCAAAATCAGCCCCAAGAGCCAAGGCTCTAAGAAGTGGCTATGGAGGAACAACAATGGGGGTGA
ATGCTATCTGGGGAATTCACTGATGCATGCAGCTGAGAACAAACAGGGTGTTGAAGAGCTTGAACATGAGCCGTCCATGGTTGCTACAGAAGACGTGAAGGTGACGGTGG
AGGGTCGAGTTCTGAGCATCCGAGGAGAGCACAGGGAAGAGGAAGGTGACGGCGGGGAGTTATGGTTATTACGACACTGCCGTGGTGCTGCCGGAGATGAAAGATGGGGG
GTGTTGGTGGTTACTGTTCCCAGGACTGAGAAGTCCCCAAAGGAGGTTAAAGAAGTCACCATTGTTTAA

mRNA sequence

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Protein sequence

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MDFSDQSSEGNESKSTKISPKSQGSKKWLWRNNNGGECYLGNSLMHAAENKQGVEELEHEPSMVATEDVKVTVEGRVLSIRGEHREEEGDGGELWLLRHCRGAAGDERWG
VLVVTVPRTEKSPKEVKEVTIV

Sed0027721 (gene) of Chayote v1 genome