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Sed0027734 (gene) of Chayote v1 genome

Gene IDSed0027734
OrganismSechium edule (Chayote v1)
DescriptionCCT-alpha
Genome locationLG10:4310026..4310272
RNA-Seq ExpressionSed0027734
SyntenySed0027734
Gene Ontology termsGO:0006457 - protein folding (biological process)
GO:0005832 - chaperonin-containing T-complex (cellular component)
GO:0005524 - ATP binding (molecular function)
GO:0016887 - ATPase activity (molecular function)
GO:0051082 - unfolded protein binding (molecular function)
InterPro domainsIPR002423 - Chaperonin Cpn60/TCP-1 family
IPR017998 - Chaperone tailless complex polypeptide 1 (TCP-1)
IPR027413 - GroEL-like equatorial domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008441727.1 PREDICTED: T-complex protein 1 subunit alpha [Cucumis melo]9.0e-2094.74Show/hide
Query:  MGLDLSNGSIRNNLEAGVIEPAMSKIKIIQFATEAAITILRIDDMIKLYKDETQNGE
        MGLDL+NGSIRNNLEAGVIEPAMSK+KIIQFATEAAITILRIDDMIKLYKDETQN E
Subjt:  MGLDLSNGSIRNNLEAGVIEPAMSKIKIIQFATEAAITILRIDDMIKLYKDETQNGE

XP_011649041.1 T-complex protein 1 subunit alpha [Cucumis sativus]9.0e-2094.74Show/hide
Query:  MGLDLSNGSIRNNLEAGVIEPAMSKIKIIQFATEAAITILRIDDMIKLYKDETQNGE
        MGLDL+NGSIRNNLEAGVIEPAMSK+KIIQFATEAAITILRIDDMIKLYKDETQN E
Subjt:  MGLDLSNGSIRNNLEAGVIEPAMSKIKIIQFATEAAITILRIDDMIKLYKDETQNGE

XP_022144491.1 T-complex protein 1 subunit alpha [Momordica charantia]2.4e-2094.83Show/hide
Query:  MGLDLSNGSIRNNLEAGVIEPAMSKIKIIQFATEAAITILRIDDMIKLYKDETQNGEE
        MGLDLSNG+IRNNLEAGVIEPAMSK+KIIQFATEAAITILRIDDMIKLYKDETQN EE
Subjt:  MGLDLSNGSIRNNLEAGVIEPAMSKIKIIQFATEAAITILRIDDMIKLYKDETQNGEE

XP_022949009.1 T-complex protein 1 subunit alpha [Cucurbita moschata]9.0e-2094.74Show/hide
Query:  MGLDLSNGSIRNNLEAGVIEPAMSKIKIIQFATEAAITILRIDDMIKLYKDETQNGE
        MGLDLSNG+IRNNLEAGVIEPAMSK+KIIQFATEAAITILRIDDMIKLYKDETQN E
Subjt:  MGLDLSNGSIRNNLEAGVIEPAMSKIKIIQFATEAAITILRIDDMIKLYKDETQNGE

XP_023524959.1 T-complex protein 1 subunit alpha [Cucurbita pepo subsp. pepo]9.0e-2094.74Show/hide
Query:  MGLDLSNGSIRNNLEAGVIEPAMSKIKIIQFATEAAITILRIDDMIKLYKDETQNGE
        MGLDLSNG+IRNNLEAGVIEPAMSK+KIIQFATEAAITILRIDDMIKLYKDETQN E
Subjt:  MGLDLSNGSIRNNLEAGVIEPAMSKIKIIQFATEAAITILRIDDMIKLYKDETQNGE

TrEMBL top hitse value%identityAlignment
A0A0A0LN13 CCT-alpha4.4e-2094.74Show/hide
Query:  MGLDLSNGSIRNNLEAGVIEPAMSKIKIIQFATEAAITILRIDDMIKLYKDETQNGE
        MGLDL+NGSIRNNLEAGVIEPAMSK+KIIQFATEAAITILRIDDMIKLYKDETQN E
Subjt:  MGLDLSNGSIRNNLEAGVIEPAMSKIKIIQFATEAAITILRIDDMIKLYKDETQNGE

A0A5A7U8G8 CCT-alpha4.4e-2094.74Show/hide
Query:  MGLDLSNGSIRNNLEAGVIEPAMSKIKIIQFATEAAITILRIDDMIKLYKDETQNGE
        MGLDL+NGSIRNNLEAGVIEPAMSK+KIIQFATEAAITILRIDDMIKLYKDETQN E
Subjt:  MGLDLSNGSIRNNLEAGVIEPAMSKIKIIQFATEAAITILRIDDMIKLYKDETQNGE

A0A5D3DFG1 CCT-alpha4.4e-2094.74Show/hide
Query:  MGLDLSNGSIRNNLEAGVIEPAMSKIKIIQFATEAAITILRIDDMIKLYKDETQNGE
        MGLDL+NGSIRNNLEAGVIEPAMSK+KIIQFATEAAITILRIDDMIKLYKDETQN E
Subjt:  MGLDLSNGSIRNNLEAGVIEPAMSKIKIIQFATEAAITILRIDDMIKLYKDETQNGE

A0A6J1CTJ9 CCT-alpha1.1e-2094.83Show/hide
Query:  MGLDLSNGSIRNNLEAGVIEPAMSKIKIIQFATEAAITILRIDDMIKLYKDETQNGEE
        MGLDLSNG+IRNNLEAGVIEPAMSK+KIIQFATEAAITILRIDDMIKLYKDETQN EE
Subjt:  MGLDLSNGSIRNNLEAGVIEPAMSKIKIIQFATEAAITILRIDDMIKLYKDETQNGEE

A0A6J1K8Y1 CCT-alpha4.4e-2094.74Show/hide
Query:  MGLDLSNGSIRNNLEAGVIEPAMSKIKIIQFATEAAITILRIDDMIKLYKDETQNGE
        MGLDLSNG+IRNNLEAGVIEPAMSK+KIIQFATEAAITILRIDDMIKLYKDETQN E
Subjt:  MGLDLSNGSIRNNLEAGVIEPAMSKIKIIQFATEAAITILRIDDMIKLYKDETQNGE

SwissProt top hitse value%identityAlignment
O15891 T-complex protein 1 subunit alpha1.4e-1276.6Show/hide
Query:  GLDLSNGSIRNNLEAGVIEPAMSKIKIIQFATEAAITILRIDDMIKL
        GLDLS G +RNN++AGV+EP +SKIK ++FATEAAITILRIDDMIKL
Subjt:  GLDLSNGSIRNNLEAGVIEPAMSKIKIIQFATEAAITILRIDDMIKL

P28769 T-complex protein 1 subunit alpha5.5e-2089.66Show/hide
Query:  MGLDLSNGSIRNNLEAGVIEPAMSKIKIIQFATEAAITILRIDDMIKLYKDETQNGEE
        MGLDL NG+IRNNLEAGVIEPAMSK+KIIQFATEAAITILRIDDMIKL KDE+Q GEE
Subjt:  MGLDLSNGSIRNNLEAGVIEPAMSKIKIIQFATEAAITILRIDDMIKLYKDETQNGEE

P41988 T-complex protein 1 subunit alpha5.9e-1464.91Show/hide
Query:  GLDLSNGSIRNNLEAGVIEPAMSKIKIIQFATEAAITILRIDDMIKLYKDETQNGEE
        GLDL  G+IR+N EAG++EPA+SK+K ++FATEAAITILRIDD+IKL K E   G++
Subjt:  GLDLSNGSIRNNLEAGVIEPAMSKIKIIQFATEAAITILRIDDMIKLYKDETQNGEE

P50157 T-complex protein 1 subunit alpha (Fragment)2.5e-1261.4Show/hide
Query:  MGLDLSNGSIRNNLEAGVIEPAMSKIKIIQFATEAAITILRIDDMIKLYKDETQNGE
        +GLDL NG  R+N +AGV EP M K K ++FATEAAITILRIDD+IKLY +    G+
Subjt:  MGLDLSNGSIRNNLEAGVIEPAMSKIKIIQFATEAAITILRIDDMIKLYKDETQNGE

Q55BM4 T-complex protein 1 subunit alpha2.9e-1367.86Show/hide
Query:  GLDLSNGSIRNNLEAGVIEPAMSKIKIIQFATEAAITILRIDDMIKLYKDETQNGE
        GLDL N  +RNNLEAGV+EPA++KIK I+FATE+AITILRIDD I L   E Q G+
Subjt:  GLDLSNGSIRNNLEAGVIEPAMSKIKIIQFATEAAITILRIDDMIKLYKDETQNGE

Arabidopsis top hitse value%identityAlignment
AT3G11830.1 TCP-1/cpn60 chaperonin family protein6.7e-0541.07Show/hide
Query:  GLDLSNGSIRNNLEAGVIEPAMSKIKIIQFATEAAITILRIDDMIKLYKDETQNGE
        G+D++ G I ++    V EPA+ KI  I  ATEAA  IL +D+ +K  K E+  G+
Subjt:  GLDLSNGSIRNNLEAGVIEPAMSKIKIIQFATEAAITILRIDDMIKLYKDETQNGE

AT3G11830.2 TCP-1/cpn60 chaperonin family protein6.7e-0541.07Show/hide
Query:  GLDLSNGSIRNNLEAGVIEPAMSKIKIIQFATEAAITILRIDDMIKLYKDETQNGE
        G+D++ G I ++    V EPA+ KI  I  ATEAA  IL +D+ +K  K E+  G+
Subjt:  GLDLSNGSIRNNLEAGVIEPAMSKIKIIQFATEAAITILRIDDMIKLYKDETQNGE

AT3G20050.1 T-complex protein 1 alpha subunit3.9e-2189.66Show/hide
Query:  MGLDLSNGSIRNNLEAGVIEPAMSKIKIIQFATEAAITILRIDDMIKLYKDETQNGEE
        MGLDL NG+IRNNLEAGVIEPAMSK+KIIQFATEAAITILRIDDMIKL KDE+Q GEE
Subjt:  MGLDLSNGSIRNNLEAGVIEPAMSKIKIIQFATEAAITILRIDDMIKLYKDETQNGEE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGACTAGATCTATCCAATGGATCCATTCGCAATAACTTGGAAGCTGGTGTCATTGAGCCGGCCATGAGCAAAATTAAGATAATTCAGTTTGCGACTGAAGCAGCAAT
TACGATTCTTCGTATTGACGACATGATCAAGCTCTACAAGGATGAAACTCAAAATGGGGAGGAATAG
mRNA sequenceShow/hide mRNA sequence
ATGGGACTAGATCTATCCAATGGATCCATTCGCAATAACTTGGAAGCTGGTGTCATTGAGCCGGCCATGAGCAAAATTAAGATAATTCAGTTTGCGACTGAAGCAGCAAT
TACGATTCTTCGTATTGACGACATGATCAAGCTCTACAAGGATGAAACTCAAAATGGGGAGGAATAG
Protein sequenceShow/hide protein sequence
MGLDLSNGSIRNNLEAGVIEPAMSKIKIIQFATEAAITILRIDDMIKLYKDETQNGEE