; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0027773 (gene) of Chayote v1 genome

Gene IDSed0027773
OrganismSechium edule (Chayote v1)
DescriptionDNA-directed RNA polymerase V subunit 7
Genome locationLG04:34241229..34243738
RNA-Seq ExpressionSed0027773
SyntenySed0027773
Gene Ontology termsGO:0006352 - DNA-templated transcription, initiation (biological process)
GO:0006412 - translation (biological process)
GO:0022627 - cytosolic small ribosomal subunit (cellular component)
GO:0003697 - single-stranded DNA binding (molecular function)
GO:0003727 - single-stranded RNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0003899 - DNA-directed 5'-3' RNA polymerase activity (molecular function)
InterPro domainsIPR012340 - Nucleic acid-binding, OB-fold
IPR036898 - RNA polymerase Rpb7-like, N-terminal domain superfamily
IPR045113 - RNA polymerase Rpb7-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004150402.1 DNA-directed RNA polymerase V subunit 7 [Cucumis sativus]1.4e-8995.43Show/hide
Query:  MFLKVQLTWNVIIPAENLDIKGLMLQRSIITHLLDEFATKKATKDLGYFLAVTTLENIGEGKVRQTGDVLFPVAFSGMTFKLYRGEILEGCVHKVLKHGV
        MFLKVQL WNVIIPAENLD KGLMLQRSII  LLDEFATKKATKDLGYFLAVTTLENIGEGKVRQTGDVLFPV FSG+TFKLYRGEILEG VHKVLKHGV
Subjt:  MFLKVQLTWNVIIPAENLDIKGLMLQRSIITHLLDEFATKKATKDLGYFLAVTTLENIGEGKVRQTGDVLFPVAFSGMTFKLYRGEILEGCVHKVLKHGV

Query:  FLRCGPVENIYLSYLKMPDYRYVPGENPVFLNDKLSKIEKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGPIS
        FLRCGPVENIYLSYLKMPDYRYVPGENPVFLNDKLSKIEKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGP+S
Subjt:  FLRCGPVENIYLSYLKMPDYRYVPGENPVFLNDKLSKIEKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGPIS

XP_008465191.1 PREDICTED: DNA-directed RNA polymerase V subunit 7 [Cucumis melo]1.1e-8995.43Show/hide
Query:  MFLKVQLTWNVIIPAENLDIKGLMLQRSIITHLLDEFATKKATKDLGYFLAVTTLENIGEGKVRQTGDVLFPVAFSGMTFKLYRGEILEGCVHKVLKHGV
        MFLKVQL WNVIIPAENLD KGLMLQRSII  LLDEFATKKATKDLGYFLAVTTLENIGEGKVRQTGDVLFPV FSG+TFKLYRGEILEG VHKVLKHGV
Subjt:  MFLKVQLTWNVIIPAENLDIKGLMLQRSIITHLLDEFATKKATKDLGYFLAVTTLENIGEGKVRQTGDVLFPVAFSGMTFKLYRGEILEGCVHKVLKHGV

Query:  FLRCGPVENIYLSYLKMPDYRYVPGENPVFLNDKLSKIEKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGPIS
        FLRCGPVENIYLSYLKMPDYRYVPGENPVFLNDKLSKIEKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGP+S
Subjt:  FLRCGPVENIYLSYLKMPDYRYVPGENPVFLNDKLSKIEKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGPIS

XP_022138329.1 DNA-directed RNA polymerase V subunit 7 [Momordica charantia]4.0e-8994.29Show/hide
Query:  MFLKVQLTWNVIIPAENLDIKGLMLQRSIITHLLDEFATKKATKDLGYFLAVTTLENIGEGKVRQTGDVLFPVAFSGMTFKLYRGEILEGCVHKVLKHGV
        MFLKVQL WNVIIP+ENLD KGLMLQRSII  LLDEFATKKATKDLGYFLAVTTLENIGEGKVRQTGDVLFPV FSG+TFKLYRGEILEG VHKVLKHGV
Subjt:  MFLKVQLTWNVIIPAENLDIKGLMLQRSIITHLLDEFATKKATKDLGYFLAVTTLENIGEGKVRQTGDVLFPVAFSGMTFKLYRGEILEGCVHKVLKHGV

Query:  FLRCGPVENIYLSYLKMPDYRYVPGENPVFLNDKLSKIEKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGPIS
        FLRCGPVENIYLSYLKMPDYRYVPGENPVF+NDKLSKIEKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGP+S
Subjt:  FLRCGPVENIYLSYLKMPDYRYVPGENPVFLNDKLSKIEKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGPIS

XP_022958784.1 DNA-directed RNA polymerase V subunit 7 [Cucurbita moschata]4.0e-8994.29Show/hide
Query:  MFLKVQLTWNVIIPAENLDIKGLMLQRSIITHLLDEFATKKATKDLGYFLAVTTLENIGEGKVRQTGDVLFPVAFSGMTFKLYRGEILEGCVHKVLKHGV
        MFLKVQL WNVIIPAENLD KGLMLQRSII  LLDEFATKKATKDLGYFLAVTTLENIGEGKVRQTGDVLFPV FSG+TFKLYRGEILEG VHKVLKHGV
Subjt:  MFLKVQLTWNVIIPAENLDIKGLMLQRSIITHLLDEFATKKATKDLGYFLAVTTLENIGEGKVRQTGDVLFPVAFSGMTFKLYRGEILEGCVHKVLKHGV

Query:  FLRCGPVENIYLSYLKMPDYRYVPGENPVFLNDKLSKIEKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGPIS
        FLRCGPVENIYLSYLKMPDYRYVPGENP+F+NDKLSKIEKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGP+S
Subjt:  FLRCGPVENIYLSYLKMPDYRYVPGENPVFLNDKLSKIEKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGPIS

XP_023006755.1 DNA-directed RNA polymerase V subunit 7 [Cucurbita maxima]5.2e-8994.29Show/hide
Query:  MFLKVQLTWNVIIPAENLDIKGLMLQRSIITHLLDEFATKKATKDLGYFLAVTTLENIGEGKVRQTGDVLFPVAFSGMTFKLYRGEILEGCVHKVLKHGV
        MFLKVQL WNVIIPAENLD KGLMLQRSII  LLDEFATKKATKDLGYFLAVTTLENIGEGKVRQTGDVLFPV FSG+TFKLYRGEILEG VHKVLKHGV
Subjt:  MFLKVQLTWNVIIPAENLDIKGLMLQRSIITHLLDEFATKKATKDLGYFLAVTTLENIGEGKVRQTGDVLFPVAFSGMTFKLYRGEILEGCVHKVLKHGV

Query:  FLRCGPVENIYLSYLKMPDYRYVPGENPVFLNDKLSKIEKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGPIS
        FLRCGPVENIYLSYLKMPDYRYVPGENP+F+NDKLSKIEKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGP+S
Subjt:  FLRCGPVENIYLSYLKMPDYRYVPGENPVFLNDKLSKIEKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGPIS

TrEMBL top hitse value%identityAlignment
A0A0A0LKQ1 Uncharacterized protein6.7e-9095.43Show/hide
Query:  MFLKVQLTWNVIIPAENLDIKGLMLQRSIITHLLDEFATKKATKDLGYFLAVTTLENIGEGKVRQTGDVLFPVAFSGMTFKLYRGEILEGCVHKVLKHGV
        MFLKVQL WNVIIPAENLD KGLMLQRSII  LLDEFATKKATKDLGYFLAVTTLENIGEGKVRQTGDVLFPV FSG+TFKLYRGEILEG VHKVLKHGV
Subjt:  MFLKVQLTWNVIIPAENLDIKGLMLQRSIITHLLDEFATKKATKDLGYFLAVTTLENIGEGKVRQTGDVLFPVAFSGMTFKLYRGEILEGCVHKVLKHGV

Query:  FLRCGPVENIYLSYLKMPDYRYVPGENPVFLNDKLSKIEKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGPIS
        FLRCGPVENIYLSYLKMPDYRYVPGENPVFLNDKLSKIEKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGP+S
Subjt:  FLRCGPVENIYLSYLKMPDYRYVPGENPVFLNDKLSKIEKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGPIS

A0A1S3CNB4 DNA-directed RNA polymerase V subunit 75.1e-9095.43Show/hide
Query:  MFLKVQLTWNVIIPAENLDIKGLMLQRSIITHLLDEFATKKATKDLGYFLAVTTLENIGEGKVRQTGDVLFPVAFSGMTFKLYRGEILEGCVHKVLKHGV
        MFLKVQL WNVIIPAENLD KGLMLQRSII  LLDEFATKKATKDLGYFLAVTTLENIGEGKVRQTGDVLFPV FSG+TFKLYRGEILEG VHKVLKHGV
Subjt:  MFLKVQLTWNVIIPAENLDIKGLMLQRSIITHLLDEFATKKATKDLGYFLAVTTLENIGEGKVRQTGDVLFPVAFSGMTFKLYRGEILEGCVHKVLKHGV

Query:  FLRCGPVENIYLSYLKMPDYRYVPGENPVFLNDKLSKIEKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGPIS
        FLRCGPVENIYLSYLKMPDYRYVPGENPVFLNDKLSKIEKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGP+S
Subjt:  FLRCGPVENIYLSYLKMPDYRYVPGENPVFLNDKLSKIEKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGPIS

A0A5D3CAJ0 DNA-directed RNA polymerase V subunit 75.1e-9095.43Show/hide
Query:  MFLKVQLTWNVIIPAENLDIKGLMLQRSIITHLLDEFATKKATKDLGYFLAVTTLENIGEGKVRQTGDVLFPVAFSGMTFKLYRGEILEGCVHKVLKHGV
        MFLKVQL WNVIIPAENLD KGLMLQRSII  LLDEFATKKATKDLGYFLAVTTLENIGEGKVRQTGDVLFPV FSG+TFKLYRGEILEG VHKVLKHGV
Subjt:  MFLKVQLTWNVIIPAENLDIKGLMLQRSIITHLLDEFATKKATKDLGYFLAVTTLENIGEGKVRQTGDVLFPVAFSGMTFKLYRGEILEGCVHKVLKHGV

Query:  FLRCGPVENIYLSYLKMPDYRYVPGENPVFLNDKLSKIEKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGPIS
        FLRCGPVENIYLSYLKMPDYRYVPGENPVFLNDKLSKIEKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGP+S
Subjt:  FLRCGPVENIYLSYLKMPDYRYVPGENPVFLNDKLSKIEKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGPIS

A0A6J1C9U9 DNA-directed RNA polymerase V subunit 71.9e-8994.29Show/hide
Query:  MFLKVQLTWNVIIPAENLDIKGLMLQRSIITHLLDEFATKKATKDLGYFLAVTTLENIGEGKVRQTGDVLFPVAFSGMTFKLYRGEILEGCVHKVLKHGV
        MFLKVQL WNVIIP+ENLD KGLMLQRSII  LLDEFATKKATKDLGYFLAVTTLENIGEGKVRQTGDVLFPV FSG+TFKLYRGEILEG VHKVLKHGV
Subjt:  MFLKVQLTWNVIIPAENLDIKGLMLQRSIITHLLDEFATKKATKDLGYFLAVTTLENIGEGKVRQTGDVLFPVAFSGMTFKLYRGEILEGCVHKVLKHGV

Query:  FLRCGPVENIYLSYLKMPDYRYVPGENPVFLNDKLSKIEKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGPIS
        FLRCGPVENIYLSYLKMPDYRYVPGENPVF+NDKLSKIEKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGP+S
Subjt:  FLRCGPVENIYLSYLKMPDYRYVPGENPVFLNDKLSKIEKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGPIS

A0A6J1H315 DNA-directed RNA polymerase V subunit 71.9e-8994.29Show/hide
Query:  MFLKVQLTWNVIIPAENLDIKGLMLQRSIITHLLDEFATKKATKDLGYFLAVTTLENIGEGKVRQTGDVLFPVAFSGMTFKLYRGEILEGCVHKVLKHGV
        MFLKVQL WNVIIPAENLD KGLMLQRSII  LLDEFATKKATKDLGYFLAVTTLENIGEGKVRQTGDVLFPV FSG+TFKLYRGEILEG VHKVLKHGV
Subjt:  MFLKVQLTWNVIIPAENLDIKGLMLQRSIITHLLDEFATKKATKDLGYFLAVTTLENIGEGKVRQTGDVLFPVAFSGMTFKLYRGEILEGCVHKVLKHGV

Query:  FLRCGPVENIYLSYLKMPDYRYVPGENPVFLNDKLSKIEKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGPIS
        FLRCGPVENIYLSYLKMPDYRYVPGENP+F+NDKLSKIEKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGP+S
Subjt:  FLRCGPVENIYLSYLKMPDYRYVPGENPVFLNDKLSKIEKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGPIS

SwissProt top hitse value%identityAlignment
A6QRA1 DNA-directed RNA polymerase V subunit 79.9e-7571.02Show/hide
Query:  MFLKVQLTWNVIIPAENLDIKGLMLQRSIITHLLDEFATKKATKDLGYFLAVTTLENIGEGKVRQ-TGDVLFPVAFSGMTFKLYRGEILEGCVHKVLKHG
        MFLKVQL WNV+IPAEN+D KGLML+R+I+  LL+ FA+KKATK+LGY++AVTTL+ IGEGK+R+ TG+VLFPV FSGMTFK+++GEI+ G VHKVLKHG
Subjt:  MFLKVQLTWNVIIPAENLDIKGLMLQRSIITHLLDEFATKKATKDLGYFLAVTTLENIGEGKVRQ-TGDVLFPVAFSGMTFKLYRGEILEGCVHKVLKHG

Query:  VFLRCGPVENIYLSYLKMPDYRYVPGENPVFLNDKLSKIEKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGPIS
        VF+RCGP+EN+YLSY KMPDY+Y+PGENP+F+N+K S+I+ +  VR +VIG KW+E EREFQAL SLEGDYLGP+S
Subjt:  VFLRCGPVENIYLSYLKMPDYRYVPGENPVFLNDKLSKIEKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGPIS

Q5E9B8 DNA-directed RNA polymerase II subunit RPB73.1e-1232.12Show/hide
Query:  TKDLGYFLAVTTLENIGEGKVRQ-TGDVLFPVAFSGMTFKLYRGEILEGCVHKVLKHGVFLRCGPVENIYLSYLKMP-DYRYVPGENPVFLN--DKLSKI
        T   G+ +AVTT++NIG G ++   G VL+PV +  + F+ ++GE+++  V +V K G+F   GP+ + ++S   +P +  + P  NP      D+   I
Subjt:  TKDLGYFLAVTTLENIGEGKVRQ-TGDVLFPVAFSGMTFKLYRGEILEGCVHKVLKHGVFLRCGPVENIYLSYLKMP-DYRYVPGENPVFLN--DKLSKI

Query:  EKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGPIS
        ++D  +R  ++GT+    + +  A+ SL  DYLG +S
Subjt:  EKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGPIS

Q6NML5 DNA-directed RNA polymerase subunit 7-like protein2.1e-2438.34Show/hide
Query:  MFLKVQLTWNVIIPAENLDIKGLMLQRSIITHLLDEFATKKATKDLGYFLAVTTLENIGEGK--------VRQTGDVLFPVAFSGMTFKLYRGEILEGCV
        MF +V++  +V I A++L+  G    + I+  LL +   +KA ++ G++L +T L++IG  K          Q   + FPV+F+  TF   RG+IL+G V
Subjt:  MFLKVQLTWNVIIPAENLDIKGLMLQRSIITHLLDEFATKKATKDLGYFLAVTTLENIGEGK--------VRQTGDVLFPVAFSGMTFKLYRGEILEGCV

Query:  HKVLKHGVFLRCGPVENIYLSYLKMPDYRYV-----PGENPVFLNDKLSKIEKDVVVRFIVIGTKWLE----AEREFQALVSLEGD-YLGPIS
         KVL +G F+R GP+   YLS LKMP Y YV       E P F  D LSKI   VVVRF V+  ++ E       ++  L +LEG+   GPIS
Subjt:  HKVLKHGVFLRCGPVENIYLSYLKMPDYRYV-----PGENPVFLNDKLSKIEKDVVVRFIVIGTKWLE----AEREFQALVSLEGD-YLGPIS

Q7ZW41 DNA-directed RNA polymerase II subunit RPB73.1e-1232.12Show/hide
Query:  TKDLGYFLAVTTLENIGEGKVRQ-TGDVLFPVAFSGMTFKLYRGEILEGCVHKVLKHGVFLRCGPVENIYLSYLKMP-DYRYVPGENPVFLN--DKLSKI
        T   G+ +AVTT++NIG G ++   G VL+PV +  + F+ ++GE+++  V +V K G+F   GP+ + ++S   +P +  + P  NP      D+   I
Subjt:  TKDLGYFLAVTTLENIGEGKVRQ-TGDVLFPVAFSGMTFKLYRGEILEGCVHKVLKHGVFLRCGPVENIYLSYLKMP-DYRYVPGENPVFLN--DKLSKI

Query:  EKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGPIS
        ++D  +R  ++GT+    + +  A+ SL  DYLG +S
Subjt:  EKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGPIS

Q8LE42 DNA-directed RNA polymerase IV subunit 72.3e-5557.47Show/hide
Query:  MFLKVQLTWNVIIPAENLDIKGLMLQRSIITHLLDEFATKKATKDLGYFLAVTTLENIGEGKVR-QTGDVLFPVAFSGMTFKLYRGEILEGCVHKVLKHG
        MF+KV+L W+V IPAE++D  GLMLQR+I+  LL+ F+ +KATKDLGY +  T LENIGEGK++ QTG++ FPV F+G+ FK+++GEI+ G VHKV K G
Subjt:  MFLKVQLTWNVIIPAENLDIKGLMLQRSIITHLLDEFATKKATKDLGYFLAVTTLENIGEGKVR-QTGDVLFPVAFSGMTFKLYRGEILEGCVHKVLKHG

Query:  VFLRCGPVENIYLSYLKMPDYRYVPGENPVFLNDKLSKIEKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGP
        VFL+ GP E IYLS++KMP Y ++PGENP F+N  +S+I+    VRF+V+ T+W EAE++F AL S++GD LGP
Subjt:  VFLRCGPVENIYLSYLKMPDYRYVPGENPVFLNDKLSKIEKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGP

Arabidopsis top hitse value%identityAlignment
AT3G22900.1 RNA polymerase Rpb7-like, N-terminal domain1.6e-5657.47Show/hide
Query:  MFLKVQLTWNVIIPAENLDIKGLMLQRSIITHLLDEFATKKATKDLGYFLAVTTLENIGEGKVR-QTGDVLFPVAFSGMTFKLYRGEILEGCVHKVLKHG
        MF+KV+L W+V IPAE++D  GLMLQR+I+  LL+ F+ +KATKDLGY +  T LENIGEGK++ QTG++ FPV F+G+ FK+++GEI+ G VHKV K G
Subjt:  MFLKVQLTWNVIIPAENLDIKGLMLQRSIITHLLDEFATKKATKDLGYFLAVTTLENIGEGKVR-QTGDVLFPVAFSGMTFKLYRGEILEGCVHKVLKHG

Query:  VFLRCGPVENIYLSYLKMPDYRYVPGENPVFLNDKLSKIEKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGP
        VFL+ GP E IYLS++KMP Y ++PGENP F+N  +S+I+    VRF+V+ T+W EAE++F AL S++GD LGP
Subjt:  VFLRCGPVENIYLSYLKMPDYRYVPGENPVFLNDKLSKIEKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGP

AT4G14520.1 DNA-directed RNA polymerase II-related1.5e-2538.34Show/hide
Query:  MFLKVQLTWNVIIPAENLDIKGLMLQRSIITHLLDEFATKKATKDLGYFLAVTTLENIGEGK--------VRQTGDVLFPVAFSGMTFKLYRGEILEGCV
        MF +V++  +V I A++L+  G    + I+  LL +   +KA ++ G++L +T L++IG  K          Q   + FPV+F+  TF   RG+IL+G V
Subjt:  MFLKVQLTWNVIIPAENLDIKGLMLQRSIITHLLDEFATKKATKDLGYFLAVTTLENIGEGK--------VRQTGDVLFPVAFSGMTFKLYRGEILEGCV

Query:  HKVLKHGVFLRCGPVENIYLSYLKMPDYRYV-----PGENPVFLNDKLSKIEKDVVVRFIVIGTKWLE----AEREFQALVSLEGD-YLGPIS
         KVL +G F+R GP+   YLS LKMP Y YV       E P F  D LSKI   VVVRF V+  ++ E       ++  L +LEG+   GPIS
Subjt:  HKVLKHGVFLRCGPVENIYLSYLKMPDYRYV-----PGENPVFLNDKLSKIEKDVVVRFIVIGTKWLE----AEREFQALVSLEGD-YLGPIS

AT4G14520.2 DNA-directed RNA polymerase II-related1.5e-2538.34Show/hide
Query:  MFLKVQLTWNVIIPAENLDIKGLMLQRSIITHLLDEFATKKATKDLGYFLAVTTLENIGEGK--------VRQTGDVLFPVAFSGMTFKLYRGEILEGCV
        MF +V++  +V I A++L+  G    + I+  LL +   +KA ++ G++L +T L++IG  K          Q   + FPV+F+  TF   RG+IL+G V
Subjt:  MFLKVQLTWNVIIPAENLDIKGLMLQRSIITHLLDEFATKKATKDLGYFLAVTTLENIGEGK--------VRQTGDVLFPVAFSGMTFKLYRGEILEGCV

Query:  HKVLKHGVFLRCGPVENIYLSYLKMPDYRYV-----PGENPVFLNDKLSKIEKDVVVRFIVIGTKWLE----AEREFQALVSLEGD-YLGPIS
         KVL +G F+R GP+   YLS LKMP Y YV       E P F  D LSKI   VVVRF V+  ++ E       ++  L +LEG+   GPIS
Subjt:  HKVLKHGVFLRCGPVENIYLSYLKMPDYRYV-----PGENPVFLNDKLSKIEKDVVVRFIVIGTKWLE----AEREFQALVSLEGD-YLGPIS

AT4G14520.3 DNA-directed RNA polymerase II-related1.5e-2538.34Show/hide
Query:  MFLKVQLTWNVIIPAENLDIKGLMLQRSIITHLLDEFATKKATKDLGYFLAVTTLENIGEGK--------VRQTGDVLFPVAFSGMTFKLYRGEILEGCV
        MF +V++  +V I A++L+  G    + I+  LL +   +KA ++ G++L +T L++IG  K          Q   + FPV+F+  TF   RG+IL+G V
Subjt:  MFLKVQLTWNVIIPAENLDIKGLMLQRSIITHLLDEFATKKATKDLGYFLAVTTLENIGEGK--------VRQTGDVLFPVAFSGMTFKLYRGEILEGCV

Query:  HKVLKHGVFLRCGPVENIYLSYLKMPDYRYV-----PGENPVFLNDKLSKIEKDVVVRFIVIGTKWLE----AEREFQALVSLEGD-YLGPIS
         KVL +G F+R GP+   YLS LKMP Y YV       E P F  D LSKI   VVVRF V+  ++ E       ++  L +LEG+   GPIS
Subjt:  HKVLKHGVFLRCGPVENIYLSYLKMPDYRYV-----PGENPVFLNDKLSKIEKDVVVRFIVIGTKWLE----AEREFQALVSLEGD-YLGPIS

AT4G14660.1 RNA polymerase Rpb7-like, N-terminal domain7.1e-7671.02Show/hide
Query:  MFLKVQLTWNVIIPAENLDIKGLMLQRSIITHLLDEFATKKATKDLGYFLAVTTLENIGEGKVRQ-TGDVLFPVAFSGMTFKLYRGEILEGCVHKVLKHG
        MFLKVQL WNV+IPAEN+D KGLML+R+I+  LL+ FA+KKATK+LGY++AVTTL+ IGEGK+R+ TG+VLFPV FSGMTFK+++GEI+ G VHKVLKHG
Subjt:  MFLKVQLTWNVIIPAENLDIKGLMLQRSIITHLLDEFATKKATKDLGYFLAVTTLENIGEGKVRQ-TGDVLFPVAFSGMTFKLYRGEILEGCVHKVLKHG

Query:  VFLRCGPVENIYLSYLKMPDYRYVPGENPVFLNDKLSKIEKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGPIS
        VF+RCGP+EN+YLSY KMPDY+Y+PGENP+F+N+K S+I+ +  VR +VIG KW+E EREFQAL SLEGDYLGP+S
Subjt:  VFLRCGPVENIYLSYLKMPDYRYVPGENPVFLNDKLSKIEKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGPIS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGGCCCAACGTAACTAAAGCCGAGACAATGACCATCACAGCGTTGATTTGGGTGATCAGAAAGGGCAAGTTTCCTCTTCGTCTTCTTCAGATTTCTGATAGGTTGAA
GGCGTGTAAAATGTTTCTCAAAGTTCAGCTGACATGGAATGTCATAATTCCTGCAGAAAACTTAGACATAAAGGGGTTGATGCTCCAAAGGTCTATAATAACTCATCTTT
TAGATGAATTTGCCACTAAGAAGGCTACCAAGGATCTCGGCTATTTCCTTGCAGTTACTACTTTAGAAAATATAGGAGAAGGGAAAGTTCGACAGACGGGCGACGTCTTG
TTTCCGGTTGCTTTTAGCGGTATGACCTTCAAGCTTTATAGGGGAGAGATCTTGGAGGGTTGTGTTCACAAAGTACTCAAGCATGGGGTTTTCTTGAGATGTGGCCCTGT
AGAAAACATCTACCTCTCTTATCTGAAAATGCCAGATTACCGCTATGTGCCGGGTGAGAATCCTGTCTTCCTGAATGACAAGCTCTCGAAAATCGAGAAAGATGTAGTCG
TTCGTTTCATTGTCATCGGAACGAAGTGGCTGGAGGCAGAAAGGGAATTTCAGGCCCTGGTAAGTTTGGAGGGTGATTATCTAGGGCCTATTTCTTGA
mRNA sequenceShow/hide mRNA sequence
GGGCAATGGAATCTTCAAACGCTGACTGGATCCCACTCCTTAGAGCTCTATTTTCTCGGATCTCAATCTAAACATACAAATATTCGAACCGTAAATGAAATCTTCAAACG
CTTTTGGCCCTTTCTTAATTCTGGTCAAGAATCAAGGCCCACCATTTCAATTACCAATCAAGCCCAAAACAAATGTGGCCCAACGTAACTAAAGCCGAGACAATGACCAT
CACAGCGTTGATTTGGGTGATCAGAAAGGGCAAGTTTCCTCTTCGTCTTCTTCAGATTTCTGATAGGTTGAAGGCGTGTAAAATGTTTCTCAAAGTTCAGCTGACATGGA
ATGTCATAATTCCTGCAGAAAACTTAGACATAAAGGGGTTGATGCTCCAAAGGTCTATAATAACTCATCTTTTAGATGAATTTGCCACTAAGAAGGCTACCAAGGATCTC
GGCTATTTCCTTGCAGTTACTACTTTAGAAAATATAGGAGAAGGGAAAGTTCGACAGACGGGCGACGTCTTGTTTCCGGTTGCTTTTAGCGGTATGACCTTCAAGCTTTA
TAGGGGAGAGATCTTGGAGGGTTGTGTTCACAAAGTACTCAAGCATGGGGTTTTCTTGAGATGTGGCCCTGTAGAAAACATCTACCTCTCTTATCTGAAAATGCCAGATT
ACCGCTATGTGCCGGGTGAGAATCCTGTCTTCCTGAATGACAAGCTCTCGAAAATCGAGAAAGATGTAGTCGTTCGTTTCATTGTCATCGGAACGAAGTGGCTGGAGGCA
GAAAGGGAATTTCAGGCCCTGGTAAGTTTGGAGGGTGATTATCTAGGGCCTATTTCTTGAATGAATTTCAGGCAATGTGAAGTTTGTAGTCTGTATGTAGTACATGCTGG
ATAACATTCCGACTTTTTGTTGATGTAATTCACCCTTAGATGTTGGACGTTAAATTTCTTGTGAAGGGGGCAGTTATTGAATTACGTCGGCAAACTACTGATTTCATTAA
TATGCATTTTATGATATGGTTAGAAAAAGTAAAGCATGTTGTCTTCAGTGGATGAACATTGTCTAGATGACTTTATTAATGGAAGGTAAGCGTTGGAAGCTATTATGTTA
TATTTCTTGTCTTTGTTGAACTTTTTTTGGATGGTCTGTTTCAAGGGTTGGGTTTTCCTATGAGTTTTGAGATGGATATTGAATAATTGATGCCTGTTTCACATTGTCGC
CCTGTGATATAAATTTTTAGTACTGGTT
Protein sequenceShow/hide protein sequence
MWPNVTKAETMTITALIWVIRKGKFPLRLLQISDRLKACKMFLKVQLTWNVIIPAENLDIKGLMLQRSIITHLLDEFATKKATKDLGYFLAVTTLENIGEGKVRQTGDVL
FPVAFSGMTFKLYRGEILEGCVHKVLKHGVFLRCGPVENIYLSYLKMPDYRYVPGENPVFLNDKLSKIEKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGPIS