; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0027776 (gene) of Chayote v1 genome

Gene IDSed0027776
OrganismSechium edule (Chayote v1)
Descriptionprotein LATERAL ROOT PRIMORDIUM 1
Genome locationLG08:21766981..21769776
RNA-Seq ExpressionSed0027776
SyntenySed0027776
Gene Ontology termsGO:0009734 - auxin-activated signaling pathway (biological process)
GO:0009851 - auxin biosynthetic process (biological process)
GO:0045893 - positive regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
InterPro domainsIPR006510 - Zinc finger, lateral root primordium type 1
IPR006511 - SHORT INTERNODES, C-terminal
IPR007818 - SHI protein family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6588219.1 Protein LATERAL ROOT PRIMORDIUM 1, partial [Cucurbita argyrosperma subsp. sororia]3.2e-14387.46Show/hide
Query:  MWPSGSS-RPIADGYGHTAAPTADMVGFMASGYGVGVSVLPLLTGLAPSSVGVQEGNWMISRNGGGGGGGGGGGGVQFQGNNFDGFGFLGSGSGLNSGAG
        MWPS SS RPIA  YGHTA P  DMVG MASGYGVG+SVLPLLTGLAPSSVG++E N MISR GGGG GGGGGGGVQF GNNFDGFGFLG GS LNSG G
Subjt:  MWPSGSS-RPIADGYGHTAAPTADMVGFMASGYGVGVSVLPLLTGLAPSSVGVQEGNWMISRNGGGGGGGGGGGGVQFQGNNFDGFGFLGSGSGLNSGAG

Query:  TCHDCGNQAKKDCNHRRCRSCCKSRGFDCPTHVKSTWVPAARRRERQMLSATADAA----GTSSGSTSGGKKARLIPSTQTTTNSHTSTSNTPTRSFDTS
        TCHDCGNQAKKDCNHRRCRSCCKSRGFDC THVKSTWVPAARRRERQ+LSA A AA    GTSSGSTSGGKK RLI S QTTTNSHTSTSNTPTRSFDT 
Subjt:  TCHDCGNQAKKDCNHRRCRSCCKSRGFDCPTHVKSTWVPAARRRERQMLSATADAA----GTSSGSTSGGKKARLIPSTQTTTNSHTSTSNTPTRSFDTS

Query:  SAADLSYKKAKKLPEQVRAPAVFKCVRVTAVEGGSGSGGNEYAYQAVVKIGGHVFKGYLYDHGVEARDGFPMFSDLHLGGGGDGGSTSSPIIDPVDVYGS
        SAAD+SYK+AKKLPEQVRAPAVFKCVRVTAVEGG GSGGNEYAYQAVVKIGGHVFKGYLYDHGVEAR+GFPM SDLHLGGGGDGGSTSSPIIDP DVYGS
Subjt:  SAADLSYKKAKKLPEQVRAPAVFKCVRVTAVEGGSGSGGNEYAYQAVVKIGGHVFKGYLYDHGVEARDGFPMFSDLHLGGGGDGGSTSSPIIDPVDVYGS

Query:  STARGGGLAGGSNYGNPIN
        S  RGGGLAGGS YGNPIN
Subjt:  STARGGGLAGGSNYGNPIN

XP_022933450.1 protein LATERAL ROOT PRIMORDIUM 1-like isoform X1 [Cucurbita moschata]9.5e-14086.48Show/hide
Query:  MWPSGSS-RPIADGYGHTAAPTADMVGFMASGYGVGVSVLPLLTGLAPSSVGVQEGNWMISRNGGGGGGGGGGGGVQFQGNNFDGFGFLGSGSGLNSGAG
        MWPS SS RPIA  YGHTA P  DMVG MASGYGVG+SVLPLLTGLAPSSVG++E N MISR   GG GGGGGGGVQF GNNFDGFGFLG GS LNSG G
Subjt:  MWPSGSS-RPIADGYGHTAAPTADMVGFMASGYGVGVSVLPLLTGLAPSSVGVQEGNWMISRNGGGGGGGGGGGGVQFQGNNFDGFGFLGSGSGLNSGAG

Query:  TCHDCGNQAKKDCNHRRCRSCCKSRGFDCPTHVKSTWVPAARRRERQMLSATADAA---GTSSGSTSGGKKARLIPSTQTTTNSHTSTSNTPTRSFDTSS
        TCHDCGNQAKKDCNHRRCRSCCKSRGFDC THVKSTWVPAARRRERQ+LSA A AA   GTSSGSTSGGKK RLI S QTTTNSHTSTSNTPTRSFDT S
Subjt:  TCHDCGNQAKKDCNHRRCRSCCKSRGFDCPTHVKSTWVPAARRRERQMLSATADAA---GTSSGSTSGGKKARLIPSTQTTTNSHTSTSNTPTRSFDTSS

Query:  AADLSYKKAKKLPEQVRAPAVFKCVRVTAVEGGSGSGGNEYAYQAVVKIGGHVFKGYLYDHGVEARDGFPMFSDLHLGGGGDGGSTSSPIIDPVDVYGSS
        AAD+SYK+AKKLPEQVRAPAVFKCVRVTAVEGG G+GGNEYAYQAVVKIGGHVFKGYLYDHGVEAR+GFPM SDLHLGGGGDGGSTSSPIIDP DVYGSS
Subjt:  AADLSYKKAKKLPEQVRAPAVFKCVRVTAVEGGSGSGGNEYAYQAVVKIGGHVFKGYLYDHGVEARDGFPMFSDLHLGGGGDGGSTSSPIIDPVDVYGSS

Query:  TARGGGLAGGSNYGNPIN
          RGGGLAG S YGNPIN
Subjt:  TARGGGLAGGSNYGNPIN

XP_022974160.1 protein LATERAL ROOT PRIMORDIUM 1-like isoform X1 [Cucurbita maxima]7.8e-14287.42Show/hide
Query:  MWP-SGSSRPIADGYGHTAAPTADMVGFMASGYGVGVSVLPLLTGLAPSSVGVQEGNWMISRNGGGGGGGGGGGGVQFQGNNFDGFGFLGSGSGLNSGAG
        MWP S SSRPIA  YGHTA P  DMVG MASGYGVG+SVLPLLTG+APSSVG++E N MISR GGGG GGGGGGGVQF GNNFDGFGFLG GS LNSG G
Subjt:  MWP-SGSSRPIADGYGHTAAPTADMVGFMASGYGVGVSVLPLLTGLAPSSVGVQEGNWMISRNGGGGGGGGGGGGVQFQGNNFDGFGFLGSGSGLNSGAG

Query:  TCHDCGNQAKKDCNHRRCRSCCKSRGFDCPTHVKSTWVPAARRRERQMLSATADAA---GTSSGSTSGGKKARLIPSTQTTTNSHTSTSNTPTRSFDTSS
        TCHDCGNQAKKDCNHRRCRSCCKSRGFDC THVKSTWVPAARRRERQ+LSA A AA   GTSSGSTSGGKK RLI S QTTTNSHTSTSNTPTRSFDT S
Subjt:  TCHDCGNQAKKDCNHRRCRSCCKSRGFDCPTHVKSTWVPAARRRERQMLSATADAA---GTSSGSTSGGKKARLIPSTQTTTNSHTSTSNTPTRSFDTSS

Query:  AADLSYKKAKKLPEQVRAPAVFKCVRVTAVEGGSGSGGNEYAYQAVVKIGGHVFKGYLYDHGVEARDGFPMFSDLHLGGGGDGGSTSSPIIDPVDVYGSS
        AAD+SYK+AKKLPEQVRAPAVFKCVRVTAVEGG GSGGNEYAYQAVVKIGGHVFKGYLYDHGVEAR+GFPM SDLHLGGGGDGGSTSSPIIDP DVYGSS
Subjt:  AADLSYKKAKKLPEQVRAPAVFKCVRVTAVEGGSGSGGNEYAYQAVVKIGGHVFKGYLYDHGVEARDGFPMFSDLHLGGGGDGGSTSSPIIDPVDVYGSS

Query:  TARGGGLAGGSNYGNPIN
          RGGGLAGGS YGNPIN
Subjt:  TARGGGLAGGSNYGNPIN

XP_022974168.1 protein LATERAL ROOT PRIMORDIUM 1-like isoform X2 [Cucurbita maxima]2.1e-13986.79Show/hide
Query:  MWP-SGSSRPIADGYGHTAAPTADMVGFMASGYGVGVSVLPLLTGLAPSSVGVQEGNWMISRNGGGGGGGGGGGGVQFQGNNFDGFGFLGSGSGLNSGAG
        MWP S SSRPIA  YGHTA P  DMVG MASGYGVG+SVLPLLTG+APSSVG++E N MISR GGGG GGGGGGGVQF GNNFDGFGFLG GS LNSG G
Subjt:  MWP-SGSSRPIADGYGHTAAPTADMVGFMASGYGVGVSVLPLLTGLAPSSVGVQEGNWMISRNGGGGGGGGGGGGVQFQGNNFDGFGFLGSGSGLNSGAG

Query:  TCHDCGNQAKKDCNHRRCRSCCKSRGFDCPTHVKSTWVPAARRRERQMLSATADAA---GTSSGSTSGGKKARLIPSTQTTTNSHTSTSNTPTRSFDTSS
        TCHDCGNQAKKDCNHRRCRSCCKSRGFDC THVKSTWVPAARRRERQ+LSA A AA   GTSSGSTSGGKK RLI S QTTTNSHTSTSNTPTRSFDT S
Subjt:  TCHDCGNQAKKDCNHRRCRSCCKSRGFDCPTHVKSTWVPAARRRERQMLSATADAA---GTSSGSTSGGKKARLIPSTQTTTNSHTSTSNTPTRSFDTSS

Query:  AADLSYKKAKKLPEQVRAPAVFKCVRVTAVEGGSGSGGNEYAYQAVVKIGGHVFKGYLYDHGVEARDGFPMFSDLHLGGGGDGGSTSSPIIDPVDVYGSS
          D+SYK+AKKLPEQVRAPAVFKCVRVTAVEGG GSGGNEYAYQAVVKIGGHVFKGYLYDHGVEAR+GFPM SDLHLGGGGDGGSTSSPIIDP DVYGSS
Subjt:  AADLSYKKAKKLPEQVRAPAVFKCVRVTAVEGGSGSGGNEYAYQAVVKIGGHVFKGYLYDHGVEARDGFPMFSDLHLGGGGDGGSTSSPIIDPVDVYGSS

Query:  TARGGGLAGGSNYGNPIN
          RGGGLAGGS YGNPIN
Subjt:  TARGGGLAGGSNYGNPIN

XP_023531847.1 protein LATERAL ROOT PRIMORDIUM 1-like isoform X1 [Cucurbita pepo subsp. pepo]1.7e-14187.42Show/hide
Query:  MWP-SGSSRPIADGYGHTAAPTADMVGFMASGYGVGVSVLPLLTGLAPSSVGVQEGNWMISRNGGGGGGGGGGGGVQFQGNNFDGFGFLGSGSGLNSGAG
        MWP S SSRPIA  YGHTA P  DMVG MASGYGVG+SVLPLLTGLAPSSVG++E N MISR GGGG GGGGGGGVQF GNNFDGFGFLG GS LNSG G
Subjt:  MWP-SGSSRPIADGYGHTAAPTADMVGFMASGYGVGVSVLPLLTGLAPSSVGVQEGNWMISRNGGGGGGGGGGGGVQFQGNNFDGFGFLGSGSGLNSGAG

Query:  TCHDCGNQAKKDCNHRRCRSCCKSRGFDCPTHVKSTWVPAARRRERQMLSATADAA---GTSSGSTSGGKKARLIPSTQTTTNSHTSTSNTPTRSFDTSS
        TCHDCGNQAKKDCNHRRCRSCCKSRGFDC THVKSTWVPAARRRERQ+LSA A AA   GTSSGSTSGGKK RLI S QTTTNSHTSTSNTPTRSFDT S
Subjt:  TCHDCGNQAKKDCNHRRCRSCCKSRGFDCPTHVKSTWVPAARRRERQMLSATADAA---GTSSGSTSGGKKARLIPSTQTTTNSHTSTSNTPTRSFDTSS

Query:  AADLSYKKAKKLPEQVRAPAVFKCVRVTAVEGGSGSGGNEYAYQAVVKIGGHVFKGYLYDHGVEARDGFPMFSDLHLGGGGDGGSTSSPIIDPVDVYGSS
        AAD+SYK+AKKLPEQVRAPAVFKCVRVTAVEGG GSGGNEYAYQAVVKIGGHVFKGYLYDHGVEAR+GFPM SDLHLGGGGDGGSTSSPIIDP DVYGSS
Subjt:  AADLSYKKAKKLPEQVRAPAVFKCVRVTAVEGGSGSGGNEYAYQAVVKIGGHVFKGYLYDHGVEARDGFPMFSDLHLGGGGDGGSTSSPIIDPVDVYGSS

Query:  TARGGGLAGGSNYGNPIN
          RGGGLAGGS YGNPI+
Subjt:  TARGGGLAGGSNYGNPIN

TrEMBL top hitse value%identityAlignment
A0A0A0M099 Transcription factor7.1e-13382.28Show/hide
Query:  MWPSGSSRPIADGYGHTAAPTADMVGFMASGYGVGVSVLPLLTGLAPSSVGVQEGNWMISRNGGGGGGGGGGGGVQFQGNNFDGFGFLGSGSGLNSGAGT
        MWP  SSRP+  GY HT APT DMVG MASG+GVGVSVLPLL+GLAPSSVG++E N MISR   GGGG  GGGG+QF GNN DGFG LG GS LNSG GT
Subjt:  MWPSGSSRPIADGYGHTAAPTADMVGFMASGYGVGVSVLPLLTGLAPSSVGVQEGNWMISRNGGGGGGGGGGGGVQFQGNNFDGFGFLGSGSGLNSGAGT

Query:  CHDCGNQAKKDCNHRRCRSCCKSRGFDCPTHVKSTWVPAARRRERQMLSATADAA--GTSSGSTSGGKKARLIPSTQTTTNSHTSTSNTPTRSFDTSSAA
        CHDCGNQAKKDC+HRRCRSCCKSRGFDC THVKSTWVPAARRRERQM+ A +DAA  GTSSGSTSGGKK RLI S QTTTNSHTSTSNTPT SFD SSAA
Subjt:  CHDCGNQAKKDCNHRRCRSCCKSRGFDCPTHVKSTWVPAARRRERQMLSATADAA--GTSSGSTSGGKKARLIPSTQTTTNSHTSTSNTPTRSFDTSSAA

Query:  DLSYKKAKKLPEQVRAPAVFKCVRVTAVEGGSGSGGNEYAYQAVVKIGGHVFKGYLYDHGVEARDGFPMFSDLHLGGGGDGGSTSSPIIDPVDVYGSSTA
        D+S KKAKKLPEQ+RAPAVFKCVRVTAVEGG+  GGNEYAYQAVVKIGGHVFKGYLYDHGVEARDGFPM S+LHL   GDGGSTSSP+IDP DVYGSST 
Subjt:  DLSYKKAKKLPEQVRAPAVFKCVRVTAVEGGSGSGGNEYAYQAVVKIGGHVFKGYLYDHGVEARDGFPMFSDLHLGGGGDGGSTSSPIIDPVDVYGSSTA

Query:  RGGGLAGGSNYGNPIN
        RGGGLAGGS YGN IN
Subjt:  RGGGLAGGSNYGNPIN

A0A6J1EZ30 protein LATERAL ROOT PRIMORDIUM 1-like isoform X29.6e-13885.85Show/hide
Query:  MWPSGSS-RPIADGYGHTAAPTADMVGFMASGYGVGVSVLPLLTGLAPSSVGVQEGNWMISRNGGGGGGGGGGGGVQFQGNNFDGFGFLGSGSGLNSGAG
        MWPS SS RPIA  YGHTA P  DMVG MASGYGVG+SVLPLLTGLAPSSVG++E N MISR   GG GGGGGGGVQF GNNFDGFGFLG GS LNSG G
Subjt:  MWPSGSS-RPIADGYGHTAAPTADMVGFMASGYGVGVSVLPLLTGLAPSSVGVQEGNWMISRNGGGGGGGGGGGGVQFQGNNFDGFGFLGSGSGLNSGAG

Query:  TCHDCGNQAKKDCNHRRCRSCCKSRGFDCPTHVKSTWVPAARRRERQMLSATADAA---GTSSGSTSGGKKARLIPSTQTTTNSHTSTSNTPTRSFDTSS
        TCHDCGNQAKKDCNHRRCRSCCKSRGFDC THVKSTWVPAARRRERQ+LSA A AA   GTSSGSTSGGKK RLI S QTTTNSHTSTSNTPTRSFDT S
Subjt:  TCHDCGNQAKKDCNHRRCRSCCKSRGFDCPTHVKSTWVPAARRRERQMLSATADAA---GTSSGSTSGGKKARLIPSTQTTTNSHTSTSNTPTRSFDTSS

Query:  AADLSYKKAKKLPEQVRAPAVFKCVRVTAVEGGSGSGGNEYAYQAVVKIGGHVFKGYLYDHGVEARDGFPMFSDLHLGGGGDGGSTSSPIIDPVDVYGSS
          D+SYK+AKKLPEQVRAPAVFKCVRVTAVEGG G+GGNEYAYQAVVKIGGHVFKGYLYDHGVEAR+GFPM SDLHLGGGGDGGSTSSPIIDP DVYGSS
Subjt:  AADLSYKKAKKLPEQVRAPAVFKCVRVTAVEGGSGSGGNEYAYQAVVKIGGHVFKGYLYDHGVEARDGFPMFSDLHLGGGGDGGSTSSPIIDPVDVYGSS

Query:  TARGGGLAGGSNYGNPIN
          RGGGLAG S YGNPIN
Subjt:  TARGGGLAGGSNYGNPIN

A0A6J1F4X3 protein LATERAL ROOT PRIMORDIUM 1-like isoform X14.6e-14086.48Show/hide
Query:  MWPSGSS-RPIADGYGHTAAPTADMVGFMASGYGVGVSVLPLLTGLAPSSVGVQEGNWMISRNGGGGGGGGGGGGVQFQGNNFDGFGFLGSGSGLNSGAG
        MWPS SS RPIA  YGHTA P  DMVG MASGYGVG+SVLPLLTGLAPSSVG++E N MISR   GG GGGGGGGVQF GNNFDGFGFLG GS LNSG G
Subjt:  MWPSGSS-RPIADGYGHTAAPTADMVGFMASGYGVGVSVLPLLTGLAPSSVGVQEGNWMISRNGGGGGGGGGGGGVQFQGNNFDGFGFLGSGSGLNSGAG

Query:  TCHDCGNQAKKDCNHRRCRSCCKSRGFDCPTHVKSTWVPAARRRERQMLSATADAA---GTSSGSTSGGKKARLIPSTQTTTNSHTSTSNTPTRSFDTSS
        TCHDCGNQAKKDCNHRRCRSCCKSRGFDC THVKSTWVPAARRRERQ+LSA A AA   GTSSGSTSGGKK RLI S QTTTNSHTSTSNTPTRSFDT S
Subjt:  TCHDCGNQAKKDCNHRRCRSCCKSRGFDCPTHVKSTWVPAARRRERQMLSATADAA---GTSSGSTSGGKKARLIPSTQTTTNSHTSTSNTPTRSFDTSS

Query:  AADLSYKKAKKLPEQVRAPAVFKCVRVTAVEGGSGSGGNEYAYQAVVKIGGHVFKGYLYDHGVEARDGFPMFSDLHLGGGGDGGSTSSPIIDPVDVYGSS
        AAD+SYK+AKKLPEQVRAPAVFKCVRVTAVEGG G+GGNEYAYQAVVKIGGHVFKGYLYDHGVEAR+GFPM SDLHLGGGGDGGSTSSPIIDP DVYGSS
Subjt:  AADLSYKKAKKLPEQVRAPAVFKCVRVTAVEGGSGSGGNEYAYQAVVKIGGHVFKGYLYDHGVEARDGFPMFSDLHLGGGGDGGSTSSPIIDPVDVYGSS

Query:  TARGGGLAGGSNYGNPIN
          RGGGLAG S YGNPIN
Subjt:  TARGGGLAGGSNYGNPIN

A0A6J1ID91 protein LATERAL ROOT PRIMORDIUM 1-like isoform X13.8e-14287.42Show/hide
Query:  MWP-SGSSRPIADGYGHTAAPTADMVGFMASGYGVGVSVLPLLTGLAPSSVGVQEGNWMISRNGGGGGGGGGGGGVQFQGNNFDGFGFLGSGSGLNSGAG
        MWP S SSRPIA  YGHTA P  DMVG MASGYGVG+SVLPLLTG+APSSVG++E N MISR GGGG GGGGGGGVQF GNNFDGFGFLG GS LNSG G
Subjt:  MWP-SGSSRPIADGYGHTAAPTADMVGFMASGYGVGVSVLPLLTGLAPSSVGVQEGNWMISRNGGGGGGGGGGGGVQFQGNNFDGFGFLGSGSGLNSGAG

Query:  TCHDCGNQAKKDCNHRRCRSCCKSRGFDCPTHVKSTWVPAARRRERQMLSATADAA---GTSSGSTSGGKKARLIPSTQTTTNSHTSTSNTPTRSFDTSS
        TCHDCGNQAKKDCNHRRCRSCCKSRGFDC THVKSTWVPAARRRERQ+LSA A AA   GTSSGSTSGGKK RLI S QTTTNSHTSTSNTPTRSFDT S
Subjt:  TCHDCGNQAKKDCNHRRCRSCCKSRGFDCPTHVKSTWVPAARRRERQMLSATADAA---GTSSGSTSGGKKARLIPSTQTTTNSHTSTSNTPTRSFDTSS

Query:  AADLSYKKAKKLPEQVRAPAVFKCVRVTAVEGGSGSGGNEYAYQAVVKIGGHVFKGYLYDHGVEARDGFPMFSDLHLGGGGDGGSTSSPIIDPVDVYGSS
        AAD+SYK+AKKLPEQVRAPAVFKCVRVTAVEGG GSGGNEYAYQAVVKIGGHVFKGYLYDHGVEAR+GFPM SDLHLGGGGDGGSTSSPIIDP DVYGSS
Subjt:  AADLSYKKAKKLPEQVRAPAVFKCVRVTAVEGGSGSGGNEYAYQAVVKIGGHVFKGYLYDHGVEARDGFPMFSDLHLGGGGDGGSTSSPIIDPVDVYGSS

Query:  TARGGGLAGGSNYGNPIN
          RGGGLAGGS YGNPIN
Subjt:  TARGGGLAGGSNYGNPIN

A0A6J1IFF1 protein LATERAL ROOT PRIMORDIUM 1-like isoform X21.0e-13986.79Show/hide
Query:  MWP-SGSSRPIADGYGHTAAPTADMVGFMASGYGVGVSVLPLLTGLAPSSVGVQEGNWMISRNGGGGGGGGGGGGVQFQGNNFDGFGFLGSGSGLNSGAG
        MWP S SSRPIA  YGHTA P  DMVG MASGYGVG+SVLPLLTG+APSSVG++E N MISR GGGG GGGGGGGVQF GNNFDGFGFLG GS LNSG G
Subjt:  MWP-SGSSRPIADGYGHTAAPTADMVGFMASGYGVGVSVLPLLTGLAPSSVGVQEGNWMISRNGGGGGGGGGGGGVQFQGNNFDGFGFLGSGSGLNSGAG

Query:  TCHDCGNQAKKDCNHRRCRSCCKSRGFDCPTHVKSTWVPAARRRERQMLSATADAA---GTSSGSTSGGKKARLIPSTQTTTNSHTSTSNTPTRSFDTSS
        TCHDCGNQAKKDCNHRRCRSCCKSRGFDC THVKSTWVPAARRRERQ+LSA A AA   GTSSGSTSGGKK RLI S QTTTNSHTSTSNTPTRSFDT S
Subjt:  TCHDCGNQAKKDCNHRRCRSCCKSRGFDCPTHVKSTWVPAARRRERQMLSATADAA---GTSSGSTSGGKKARLIPSTQTTTNSHTSTSNTPTRSFDTSS

Query:  AADLSYKKAKKLPEQVRAPAVFKCVRVTAVEGGSGSGGNEYAYQAVVKIGGHVFKGYLYDHGVEARDGFPMFSDLHLGGGGDGGSTSSPIIDPVDVYGSS
          D+SYK+AKKLPEQVRAPAVFKCVRVTAVEGG GSGGNEYAYQAVVKIGGHVFKGYLYDHGVEAR+GFPM SDLHLGGGGDGGSTSSPIIDP DVYGSS
Subjt:  AADLSYKKAKKLPEQVRAPAVFKCVRVTAVEGGSGSGGNEYAYQAVVKIGGHVFKGYLYDHGVEARDGFPMFSDLHLGGGGDGGSTSSPIIDPVDVYGSS

Query:  TARGGGLAGGSNYGNPIN
          RGGGLAGGS YGNPIN
Subjt:  TARGGGLAGGSNYGNPIN

SwissProt top hitse value%identityAlignment
O65517 Protein SHI RELATED SEQUENCE 24.0e-3241.78Show/hide
Query:  TCHDCGNQAKKDCNHRRCRSCCKSRGFDCPTHVKSTWVPAARRRERQM---LSATADAAGTSSGSTSGGKKARLIPSTQTTTNSHTSTSNTPTRSFDTSS
        +C DCGNQAKKDC H RCR+CCKSRGFDC THV+STW+P ARRRERQ    +S +    G+ SG   GG  +        T    +S+S  P+ S     
Subjt:  TCHDCGNQAKKDCNHRRCRSCCKSRGFDCPTHVKSTWVPAARRRERQM---LSATADAAGTSSGSTSGGKKARLIPSTQTTTNSHTSTSNTPTRSFDTSS

Query:  AADLSYKKAKKLPEQVRAPAVFKCVRVTAVEGGSGSGGNEYAYQAVVKIGGHVFKGYLYDHGVEAR-----DGFPMFSDLHLGGGGDGGSTSSPIIDPVD
         A L   +A   P +V + A+F+CV+++ V+ G   G  +YAYQ  V IGGH+FKG LYD G E+       G         GGGG G   + P++    
Subjt:  AADLSYKKAKKLPEQVRAPAVFKCVRVTAVEGGSGSGGNEYAYQAVVKIGGHVFKGYLYDHGVEAR-----DGFPMFSDLHLGGGGDGGSTSSPIIDPVD

Query:  VYGSSTARGGGLA
             T  GGG++
Subjt:  VYGSSTARGGGLA

Q94CK9 Protein LATERAL ROOT PRIMORDIUM 11.3e-5451.39Show/hide
Query:  ASGYGVGVSVLPLLTGLAPSSVGVQEGNWMISRNGGGGGGGGGGGGVQ---FQGNNFDGFGFLGSGSGLNSGA---GTCHDCGNQAKKDCNHRRCRSCCK
        A+   +GV V+PLLT   P    V++ +     N             Q   F+  N    G   + SG  SGA    TC DCGNQAKK+C  RRCR+CCK
Subjt:  ASGYGVGVSVLPLLTGLAPSSVGVQEGNWMISRNGGGGGGGGGGGGVQ---FQGNNFDGFGFLGSGSGLNSGA---GTCHDCGNQAKKDCNHRRCRSCCK

Query:  SRGFDCPTHVKSTWVPAARRRERQMLSATAD-AAGTSSGSTSGGKKARLIPS---TQTTTNSHTSTSNTPTRSFDTSSAADLSYKKAKKLPEQVRAPAVF
        SRGFDC THVKSTWV AARRRERQ++   A+  AG+S  ++SG KK R++ S    Q    SHTSTSNTP +SF+TSS+        +  P QVRA AVF
Subjt:  SRGFDCPTHVKSTWVPAARRRERQMLSATAD-AAGTSSGSTSGGKKARLIPS---TQTTTNSHTSTSNTPTRSFDTSSAADLSYKKAKKLPEQVRAPAVF

Query:  KCVRVTAVEGGSGSGGNEYAYQAVVKIGGHVFKGYLYDHGVEARDGFPMFSDLHLGGGG---DGGSTSSPIIDPVD-VYGSSTARGGG
        KCVRVTAVE     G +EYAYQAVVKIGGHVFKG+LYD G+E ++GFP  SDLHLGG     +G S S+PI+DP + VYG     GGG
Subjt:  KCVRVTAVEGGSGSGGNEYAYQAVVKIGGHVFKGYLYDHGVEARDGFPMFSDLHLGGGG---DGGSTSSPIIDPVD-VYGSSTARGGG

Q9LQZ5 Protein SHI RELATED SEQUENCE 52.4e-2940Show/hide
Query:  NFDGFGFLGSGSGLNS--------------------------GAGTCHDCGNQAKKDCNHRRCRSCCKSRGFDCPTHVKSTWVPAARRRERQMLSATADA
        NF  FG + SGS  N+                          G   C DCGNQAKKDC H RCR+CCKSRGF C THVKSTWVPAA+RRER    A+   
Subjt:  NFDGFGFLGSGSGLNS--------------------------GAGTCHDCGNQAKKDCNHRRCRSCCKSRGFDCPTHVKSTWVPAARRRERQMLSATADA

Query:  AGTSSGSTSGGKKARLIPSTQTTTNSH------TSTSNTPTRSFDTSSAADLSYKKAKKLPEQVRAPAVFKCVRVTAVEGGSGSGGNEYAYQAVVKIGGH
           SS  T   K+ R         +        ++ +NT   + +++S  ++S    + LP +V +PA+F+CVRV+++E         YAYQ  V IGGH
Subjt:  AGTSSGSTSGGKKARLIPSTQTTTNSH------TSTSNTPTRSFDTSSAADLSYKKAKKLPEQVRAPAVFKCVRVTAVEGGSGSGGNEYAYQAVVKIGGH

Query:  VFKGYLYDHGVEARD
        +FKG LYD G E +D
Subjt:  VFKGYLYDHGVEARD

Q9SD40 Protein SHI RELATED SEQUENCE 16.4e-3040.09Show/hide
Query:  GSGLNSGAGTCHDCGNQAKKDCNHRRCRSCCKSRGFDCPTHVKSTWVPAARRRERQMLSATADAAGTSSGSTSGGKKARLIPSTQTTTNSHTSTSNTPTR
        GSG  SG  +C DCGNQAKKDC+H RCR+CCKSRGF+C THV+STWVPAA+RRERQ   AT              +    +P  ++    H       + 
Subjt:  GSGLNSGAGTCHDCGNQAKKDCNHRRCRSCCKSRGFDCPTHVKSTWVPAARRRERQMLSATADAAGTSSGSTSGGKKARLIPSTQTTTNSHTSTSNTPTR

Query:  SFDTSSAADLSYKKAKKLPEQVRAPAVFKCVRVTAVEGGSGSGGNEYAYQAVVKIGGHVFKGYLYD--HGVEARDGFPMFSDLHLGGGGDGGSTSSPIID
        S   +     S  +    P +V + AVF+CVRV++VE G      E+AYQ  V IGGH+FKG LYD   G     G+ + +      GG G    + I  
Subjt:  SFDTSSAADLSYKKAKKLPEQVRAPAVFKCVRVTAVEGGSGSGGNEYAYQAVVKIGGHVFKGYLYD--HGVEARDGFPMFSDLHLGGGGDGGSTSSPIID

Query:  ---PVDVYGSSTARGGGLAGGS
            V    SST   GG+   S
Subjt:  ---PVDVYGSSTARGGGLAGGS

Q9XGX0 Protein SHORT INTERNODES2.0e-3141.52Show/hide
Query:  SGLNSGAGTCHDCGNQAKKDCNHRRCRSCCKSRGFDCPTHVKSTWVPAARRRERQMLSATADAAGTSSGSTSGGKKARLIPSTQTTTNSHTSTSNTPTRS
        SG  SG  +C DCGNQ+KKDC+H RCR+CCKSRG DCPTHVKSTWVPAA+RRERQ   +T        GS    ++ R+    ++T+ ++T   +  T  
Subjt:  SGLNSGAGTCHDCGNQAKKDCNHRRCRSCCKSRGFDCPTHVKSTWVPAARRRERQMLSATADAAGTSSGSTSGGKKARLIPSTQTTTNSHTSTSNTPTRS

Query:  FDTSSAADLSYKKAKKLPEQVRAPAVFKCVRVTAVEGGSGSGGNEYAYQAVVKIGGHVFKGYLYDHGVEARDGFPMFSD-LHLGGGGDGGSTSSPIIDPV
         +  +            P +V + AVF+CVRV++V+        EYAY+  V IGGHVFKG LYD G   R      S  L+L   G   S+SSP +   
Subjt:  FDTSSAADLSYKKAKKLPEQVRAPAVFKCVRVTAVEGGSGSGGNEYAYQAVVKIGGHVFKGYLYDHGVEARDGFPMFSD-LHLGGGGDGGSTSSPIIDPV

Query:  DVYGSSTARGGGLAGGSNYGNPIN
        +    ST+         NY  PIN
Subjt:  DVYGSSTARGGGLAGGSNYGNPIN

Arabidopsis top hitse value%identityAlignment
AT4G36260.1 Lateral root primordium (LRP) protein-related2.8e-3341.78Show/hide
Query:  TCHDCGNQAKKDCNHRRCRSCCKSRGFDCPTHVKSTWVPAARRRERQM---LSATADAAGTSSGSTSGGKKARLIPSTQTTTNSHTSTSNTPTRSFDTSS
        +C DCGNQAKKDC H RCR+CCKSRGFDC THV+STW+P ARRRERQ    +S +    G+ SG   GG  +        T    +S+S  P+ S     
Subjt:  TCHDCGNQAKKDCNHRRCRSCCKSRGFDCPTHVKSTWVPAARRRERQM---LSATADAAGTSSGSTSGGKKARLIPSTQTTTNSHTSTSNTPTRSFDTSS

Query:  AADLSYKKAKKLPEQVRAPAVFKCVRVTAVEGGSGSGGNEYAYQAVVKIGGHVFKGYLYDHGVEAR-----DGFPMFSDLHLGGGGDGGSTSSPIIDPVD
         A L   +A   P +V + A+F+CV+++ V+ G   G  +YAYQ  V IGGH+FKG LYD G E+       G         GGGG G   + P++    
Subjt:  AADLSYKKAKKLPEQVRAPAVFKCVRVTAVEGGSGSGGNEYAYQAVVKIGGHVFKGYLYDHGVEAR-----DGFPMFSDLHLGGGGDGGSTSSPIIDPVD

Query:  VYGSSTARGGGLA
             T  GGG++
Subjt:  VYGSSTARGGGLA

AT5G12330.1 Lateral root primordium (LRP) protein-related9.1e-5651.39Show/hide
Query:  ASGYGVGVSVLPLLTGLAPSSVGVQEGNWMISRNGGGGGGGGGGGGVQ---FQGNNFDGFGFLGSGSGLNSGA---GTCHDCGNQAKKDCNHRRCRSCCK
        A+   +GV V+PLLT   P    V++ +     N             Q   F+  N    G   + SG  SGA    TC DCGNQAKK+C  RRCR+CCK
Subjt:  ASGYGVGVSVLPLLTGLAPSSVGVQEGNWMISRNGGGGGGGGGGGGVQ---FQGNNFDGFGFLGSGSGLNSGA---GTCHDCGNQAKKDCNHRRCRSCCK

Query:  SRGFDCPTHVKSTWVPAARRRERQMLSATAD-AAGTSSGSTSGGKKARLIPS---TQTTTNSHTSTSNTPTRSFDTSSAADLSYKKAKKLPEQVRAPAVF
        SRGFDC THVKSTWV AARRRERQ++   A+  AG+S  ++SG KK R++ S    Q    SHTSTSNTP +SF+TSS+        +  P QVRA AVF
Subjt:  SRGFDCPTHVKSTWVPAARRRERQMLSATAD-AAGTSSGSTSGGKKARLIPS---TQTTTNSHTSTSNTPTRSFDTSSAADLSYKKAKKLPEQVRAPAVF

Query:  KCVRVTAVEGGSGSGGNEYAYQAVVKIGGHVFKGYLYDHGVEARDGFPMFSDLHLGGGG---DGGSTSSPIIDPVD-VYGSSTARGGG
        KCVRVTAVE     G +EYAYQAVVKIGGHVFKG+LYD G+E ++GFP  SDLHLGG     +G S S+PI+DP + VYG     GGG
Subjt:  KCVRVTAVEGGSGSGGNEYAYQAVVKIGGHVFKGYLYDHGVEARDGFPMFSDLHLGGGG---DGGSTSSPIIDPVD-VYGSSTARGGG

AT5G12330.2 Lateral root primordium (LRP) protein-related9.1e-5651.39Show/hide
Query:  ASGYGVGVSVLPLLTGLAPSSVGVQEGNWMISRNGGGGGGGGGGGGVQ---FQGNNFDGFGFLGSGSGLNSGA---GTCHDCGNQAKKDCNHRRCRSCCK
        A+   +GV V+PLLT   P    V++ +     N             Q   F+  N    G   + SG  SGA    TC DCGNQAKK+C  RRCR+CCK
Subjt:  ASGYGVGVSVLPLLTGLAPSSVGVQEGNWMISRNGGGGGGGGGGGGVQ---FQGNNFDGFGFLGSGSGLNSGA---GTCHDCGNQAKKDCNHRRCRSCCK

Query:  SRGFDCPTHVKSTWVPAARRRERQMLSATAD-AAGTSSGSTSGGKKARLIPS---TQTTTNSHTSTSNTPTRSFDTSSAADLSYKKAKKLPEQVRAPAVF
        SRGFDC THVKSTWV AARRRERQ++   A+  AG+S  ++SG KK R++ S    Q    SHTSTSNTP +SF+TSS+        +  P QVRA AVF
Subjt:  SRGFDCPTHVKSTWVPAARRRERQMLSATAD-AAGTSSGSTSGGKKARLIPS---TQTTTNSHTSTSNTPTRSFDTSSAADLSYKKAKKLPEQVRAPAVF

Query:  KCVRVTAVEGGSGSGGNEYAYQAVVKIGGHVFKGYLYDHGVEARDGFPMFSDLHLGGGG---DGGSTSSPIIDPVD-VYGSSTARGGG
        KCVRVTAVE     G +EYAYQAVVKIGGHVFKG+LYD G+E ++GFP  SDLHLGG     +G S S+PI+DP + VYG     GGG
Subjt:  KCVRVTAVEGGSGSGGNEYAYQAVVKIGGHVFKGYLYDHGVEARDGFPMFSDLHLGGGG---DGGSTSSPIIDPVD-VYGSSTARGGG

AT5G12330.4 Lateral root primordium (LRP) protein-related9.1e-5651.39Show/hide
Query:  ASGYGVGVSVLPLLTGLAPSSVGVQEGNWMISRNGGGGGGGGGGGGVQ---FQGNNFDGFGFLGSGSGLNSGA---GTCHDCGNQAKKDCNHRRCRSCCK
        A+   +GV V+PLLT   P    V++ +     N             Q   F+  N    G   + SG  SGA    TC DCGNQAKK+C  RRCR+CCK
Subjt:  ASGYGVGVSVLPLLTGLAPSSVGVQEGNWMISRNGGGGGGGGGGGGVQ---FQGNNFDGFGFLGSGSGLNSGA---GTCHDCGNQAKKDCNHRRCRSCCK

Query:  SRGFDCPTHVKSTWVPAARRRERQMLSATAD-AAGTSSGSTSGGKKARLIPS---TQTTTNSHTSTSNTPTRSFDTSSAADLSYKKAKKLPEQVRAPAVF
        SRGFDC THVKSTWV AARRRERQ++   A+  AG+S  ++SG KK R++ S    Q    SHTSTSNTP +SF+TSS+        +  P QVRA AVF
Subjt:  SRGFDCPTHVKSTWVPAARRRERQMLSATAD-AAGTSSGSTSGGKKARLIPS---TQTTTNSHTSTSNTPTRSFDTSSAADLSYKKAKKLPEQVRAPAVF

Query:  KCVRVTAVEGGSGSGGNEYAYQAVVKIGGHVFKGYLYDHGVEARDGFPMFSDLHLGGGG---DGGSTSSPIIDPVD-VYGSSTARGGG
        KCVRVTAVE     G +EYAYQAVVKIGGHVFKG+LYD G+E ++GFP  SDLHLGG     +G S S+PI+DP + VYG     GGG
Subjt:  KCVRVTAVEGGSGSGGNEYAYQAVVKIGGHVFKGYLYDHGVEARDGFPMFSDLHLGGGG---DGGSTSSPIIDPVD-VYGSSTARGGG

AT5G66350.1 Lateral root primordium (LRP) protein-related1.4e-3241.52Show/hide
Query:  SGLNSGAGTCHDCGNQAKKDCNHRRCRSCCKSRGFDCPTHVKSTWVPAARRRERQMLSATADAAGTSSGSTSGGKKARLIPSTQTTTNSHTSTSNTPTRS
        SG  SG  +C DCGNQ+KKDC+H RCR+CCKSRG DCPTHVKSTWVPAA+RRERQ   +T        GS    ++ R+    ++T+ ++T   +  T  
Subjt:  SGLNSGAGTCHDCGNQAKKDCNHRRCRSCCKSRGFDCPTHVKSTWVPAARRRERQMLSATADAAGTSSGSTSGGKKARLIPSTQTTTNSHTSTSNTPTRS

Query:  FDTSSAADLSYKKAKKLPEQVRAPAVFKCVRVTAVEGGSGSGGNEYAYQAVVKIGGHVFKGYLYDHGVEARDGFPMFSD-LHLGGGGDGGSTSSPIIDPV
         +  +            P +V + AVF+CVRV++V+        EYAY+  V IGGHVFKG LYD G   R      S  L+L   G   S+SSP +   
Subjt:  FDTSSAADLSYKKAKKLPEQVRAPAVFKCVRVTAVEGGSGSGGNEYAYQAVVKIGGHVFKGYLYDHGVEARDGFPMFSD-LHLGGGGDGGSTSSPIIDPV

Query:  DVYGSSTARGGGLAGGSNYGNPIN
        +    ST+         NY  PIN
Subjt:  DVYGSSTARGGGLAGGSNYGNPIN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGGCCCTCCGGTTCCTCCAGGCCCATCGCCGATGGGTATGGCCATACGGCAGCGCCAACGGCGGACATGGTGGGTTTCATGGCTTCTGGATACGGCGTCGGTGTCAG
CGTATTGCCTCTCCTTACCGGGCTCGCGCCATCGAGCGTCGGAGTCCAAGAGGGTAATTGGATGATCAGCCGCAACGGCGGCGGCGGTGGAGGTGGTGGTGGTGGTGGTG
GAGTTCAATTTCAAGGGAACAATTTTGATGGGTTTGGGTTTTTGGGAAGTGGGTCGGGTTTGAATTCGGGCGCCGGGACTTGCCATGACTGTGGGAACCAAGCTAAGAAA
GATTGCAACCACCGCCGGTGCCGGAGCTGCTGTAAAAGCCGGGGCTTTGACTGTCCTACTCACGTGAAGAGCACGTGGGTTCCTGCGGCACGGCGGAGAGAGCGCCAGAT
GCTGAGTGCCACCGCAGACGCCGCCGGGACTTCGTCGGGCTCCACCTCCGGCGGGAAGAAGGCGAGGCTTATTCCGTCGACCCAGACAACTACCAATTCTCACACTTCCA
CTTCCAATACTCCAACACGAAGCTTCGACACTTCTTCAGCTGCCGATCTGAGTTATAAAAAAGCAAAGAAGCTACCCGAACAAGTACGAGCACCAGCAGTGTTCAAGTGT
GTCCGGGTGACCGCAGTGGAGGGCGGCAGTGGCAGTGGCGGGAATGAATATGCATATCAAGCCGTCGTGAAGATCGGCGGCCATGTTTTCAAAGGTTATTTATACGACCA
TGGAGTGGAAGCTAGAGATGGCTTTCCAATGTTTTCGGACTTGCATCTCGGCGGTGGCGGGGATGGCGGTTCGACATCGTCACCGATCATTGATCCTGTCGACGTTTATG
GAAGCTCCACTGCTCGGGGCGGAGGACTGGCTGGGGGCTCCAACTATGGTAATCCGATAAATTGA
mRNA sequenceShow/hide mRNA sequence
AAAAAAGAAAGTAGAGAAGGAGGAGAGAGAATAGTCGGCGATGATTTAATGACTGCACATAACTCTCAAACACACAAAAACCACTTTTACACAAAACTCTCAAATCCAAC
ACCTTCAAATACCTCCATAGCAACAACACCAGCTTCCTCATTTCTCAATTCAAAAATTTCTTCTTTTTCTTCTCTCTCTCTCTAAATTACAAACCATTCATATATTTCCC
CTAAGAATCCATGTTCCTGTCAGTTCCTCACCTCCCCTCATCCATTTAGGCCTCTTCAATCTTCAAGAGATTTTATTTACAATTAGGGTTTTCTTTGGTCGCCGTAGATT
CATCAGCTGTGGCTGCCGCACGCCGTCTCCCTTCCGATTCGGGCGCCTTTGCCGATTGGGTGGGCCCTCCCTCGGCCGCCGATGAACTCTCTCTCGGTTTCAATTCCGCT
GCTGACGTTCCGGTTGCCCGGATGTGGCCCTCCGGTTCCTCCAGGCCCATCGCCGATGGGTATGGCCATACGGCAGCGCCAACGGCGGACATGGTGGGTTTCATGGCTTC
TGGATACGGCGTCGGTGTCAGCGTATTGCCTCTCCTTACCGGGCTCGCGCCATCGAGCGTCGGAGTCCAAGAGGGTAATTGGATGATCAGCCGCAACGGCGGCGGCGGTG
GAGGTGGTGGTGGTGGTGGTGGAGTTCAATTTCAAGGGAACAATTTTGATGGGTTTGGGTTTTTGGGAAGTGGGTCGGGTTTGAATTCGGGCGCCGGGACTTGCCATGAC
TGTGGGAACCAAGCTAAGAAAGATTGCAACCACCGCCGGTGCCGGAGCTGCTGTAAAAGCCGGGGCTTTGACTGTCCTACTCACGTGAAGAGCACGTGGGTTCCTGCGGC
ACGGCGGAGAGAGCGCCAGATGCTGAGTGCCACCGCAGACGCCGCCGGGACTTCGTCGGGCTCCACCTCCGGCGGGAAGAAGGCGAGGCTTATTCCGTCGACCCAGACAA
CTACCAATTCTCACACTTCCACTTCCAATACTCCAACACGAAGCTTCGACACTTCTTCAGCTGCCGATCTGAGTTATAAAAAAGCAAAGAAGCTACCCGAACAAGTACGA
GCACCAGCAGTGTTCAAGTGTGTCCGGGTGACCGCAGTGGAGGGCGGCAGTGGCAGTGGCGGGAATGAATATGCATATCAAGCCGTCGTGAAGATCGGCGGCCATGTTTT
CAAAGGTTATTTATACGACCATGGAGTGGAAGCTAGAGATGGCTTTCCAATGTTTTCGGACTTGCATCTCGGCGGTGGCGGGGATGGCGGTTCGACATCGTCACCGATCA
TTGATCCTGTCGACGTTTATGGAAGCTCCACTGCTCGGGGCGGAGGACTGGCTGGGGGCTCCAACTATGGTAATCCGATAAATTGAGTTGTTCTCTTTGTTGAATTACAT
ATGGATCCATATGTGTAAACAAGTTCAAATGTTTGGTTACAGCATTTGAATTTGTTTAGTGGGAAAATAAGAGATAGAAGCCTCTACTTGTGGTTTATATTTATATTTAT
TTTTATATTGCATGCAAATAATTATATTCTATTAATATTTTAATGTTTAAATTCATTT
Protein sequenceShow/hide protein sequence
MWPSGSSRPIADGYGHTAAPTADMVGFMASGYGVGVSVLPLLTGLAPSSVGVQEGNWMISRNGGGGGGGGGGGGVQFQGNNFDGFGFLGSGSGLNSGAGTCHDCGNQAKK
DCNHRRCRSCCKSRGFDCPTHVKSTWVPAARRRERQMLSATADAAGTSSGSTSGGKKARLIPSTQTTTNSHTSTSNTPTRSFDTSSAADLSYKKAKKLPEQVRAPAVFKC
VRVTAVEGGSGSGGNEYAYQAVVKIGGHVFKGYLYDHGVEARDGFPMFSDLHLGGGGDGGSTSSPIIDPVDVYGSSTARGGGLAGGSNYGNPIN