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Sed0027779 (gene) of Chayote v1 genome

Gene IDSed0027779
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG04:11085277..11085657
RNA-Seq ExpressionSed0027779
SyntenySed0027779
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575830.1 hypothetical protein SDJN03_26469, partial [Cucurbita argyrosperma subsp. sororia]4.5e-0834.21Show/hide
Query:  MAGEWTMVKELGMREMYGTLVFQKGEE------HLFGG------GDIK----NGAKITLFNEDTNKALKTTITQLVGDEYHIKWDIRKKDYVAGDEIFMR
        MAG+WTM+K+L   +M G L  ++ +E      +LF         D+K    +  +I L++ + ++A++TT+  L    YHI+WDI+ K Y +GD++ M 
Subjt:  MAGEWTMVKELGMREMYGTLVFQKGEE------HLFGG------GDIK----NGAKITLFNEDTNKALKTTITQLVGDEYHIKWDIRKKDYVAGDEIFMR

Query:  WNSTNKRLCYKIVK
        W+    RL YKI++
Subjt:  WNSTNKRLCYKIVK

KAG6575832.1 hypothetical protein SDJN03_26471, partial [Cucurbita argyrosperma subsp. sororia]8.3e-1033.85Show/hide
Query:  MAGEWTMVKELGMREMYGTLVFQKGE------EHLFG----------GGDIKNGAKITLFNEDTNKALKTTITQLVGDEYHIKWDIRKKDYVAGDEIFMR
        M   WTM+K+L   +M G L  ++ +       +LF              I N AKITLF+E+TN+ + TTI  L    YHI+WD++ K Y +G ++ M 
Subjt:  MAGEWTMVKELGMREMYGTLVFQKGE------EHLFG----------GGDIKNGAKITLFNEDTNKALKTTITQLVGDEYHIKWDIRKKDYVAGDEIFMR

Query:  WNSTNKRLCYKIVKNARLRPYPQSAKLFSS
        W+    RL YK+++     P+P+ +   SS
Subjt:  WNSTNKRLCYKIVKNARLRPYPQSAKLFSS

TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGGTGAATGGACAATGGTAAAAGAGTTAGGAATGAGAGAAATGTATGGAACATTGGTGTTTCAAAAAGGAGAAGAACACTTATTTGGAGGGGGAGACATTAAGAA
TGGAGCAAAAATCACTTTGTTCAATGAGGACACAAACAAAGCCTTGAAAACAACGATCACACAGCTCGTGGGCGACGAATATCATATCAAATGGGACATTAGAAAAAAAG
ATTACGTAGCTGGAGATGAAATTTTCATGCGTTGGAATTCTACAAATAAACGATTGTGTTACAAGATCGTTAAAAATGCTCGTCTACGACCGTATCCACAAAGTGCGAAA
CTATTTTCAAGCAAAACTGCCCATGAAAATATGCAACAATGGGGCAAATAA
mRNA sequenceShow/hide mRNA sequence
ATGGCAGGTGAATGGACAATGGTAAAAGAGTTAGGAATGAGAGAAATGTATGGAACATTGGTGTTTCAAAAAGGAGAAGAACACTTATTTGGAGGGGGAGACATTAAGAA
TGGAGCAAAAATCACTTTGTTCAATGAGGACACAAACAAAGCCTTGAAAACAACGATCACACAGCTCGTGGGCGACGAATATCATATCAAATGGGACATTAGAAAAAAAG
ATTACGTAGCTGGAGATGAAATTTTCATGCGTTGGAATTCTACAAATAAACGATTGTGTTACAAGATCGTTAAAAATGCTCGTCTACGACCGTATCCACAAAGTGCGAAA
CTATTTTCAAGCAAAACTGCCCATGAAAATATGCAACAATGGGGCAAATAA
Protein sequenceShow/hide protein sequence
MAGEWTMVKELGMREMYGTLVFQKGEEHLFGGGDIKNGAKITLFNEDTNKALKTTITQLVGDEYHIKWDIRKKDYVAGDEIFMRWNSTNKRLCYKIVKNARLRPYPQSAK
LFSSKTAHENMQQWGK