; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0027797 (gene) of Chayote v1 genome

Gene IDSed0027797
OrganismSechium edule (Chayote v1)
Description60S ribosomal protein L26
Genome locationLG01:3488422..3491938
RNA-Seq ExpressionSed0027797
SyntenySed0027797
Gene Ontology termsGO:0002181 - cytoplasmic translation (biological process)
GO:0042273 - ribosomal large subunit biogenesis (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR005756 - Ribosomal protein L26/L24, eukaryotic/archaeal
IPR005824 - KOW
IPR005825 - Ribosomal protein L24/L26, conserved site
IPR008991 - Translation protein SH3-like domain superfamily
IPR014722 - Ribosomal protein L2, domain 2
IPR041988 - Ribosomal protein L26/L24, KOW domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008457837.1 PREDICTED: 60S ribosomal protein L26-1-like [Cucumis melo]1.1e-6995.21Show/hide
Query:  MKYNPRVSSSRRKNRKAHFTAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQILRGTFKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP
        MKYNPRVSSSRRKNRKAHF+APSSVRR+LMSAPLSGDLRSKYNVRSMPIRKDDEVQ+LRGT+KGREGKVVQVYRRKW+IHIERITREKVNGSTVNVGI P
Subjt:  MKYNPRVSSSRRKNRKAHFTAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQILRGTFKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP

Query:  SKVMITKIKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD
        SKVMITK+KLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD
Subjt:  SKVMITKIKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD

XP_010102767.1 60S ribosomal protein L26-1 [Morus notabilis]7.0e-6993.84Show/hide
Query:  MKYNPRVSSSRRKNRKAHFTAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQILRGTFKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP
        MKYNPRVSSSRRK+RKAHFTAPSSVRRVLMSAPLSGDLRSKYNVRSMP+RKDDEVQ++RGT+KGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP
Subjt:  MKYNPRVSSSRRKNRKAHFTAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQILRGTFKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP

Query:  SKVMITKIKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD
        SKV+ITK++LDKDRKSLLDRKAKGRA+ADKDKGTKFTAEDIMQSVD
Subjt:  SKVMITKIKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD

XP_022149443.1 60S ribosomal protein L26-1-like [Momordica charantia]7.4e-7196.58Show/hide
Query:  MKYNPRVSSSRRKNRKAHFTAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQILRGTFKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP
        MKYNPRVSSSRRKNRKAHFTAPSSVRR+LMSAPLSGDLRSKYNVRSMP+RKDDEVQ+LRGT+KGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP
Subjt:  MKYNPRVSSSRRKNRKAHFTAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQILRGTFKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP

Query:  SKVMITKIKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD
        SKVMITK+KLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD
Subjt:  SKVMITKIKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD

XP_022931741.1 60S ribosomal protein L26-1-like [Cucurbita moschata]1.8e-6995.21Show/hide
Query:  MKYNPRVSSSRRKNRKAHFTAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQILRGTFKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP
        MKYNPRVSSSRRK+RKAHF+APSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQ+LRGT+KGREGKVVQVYRRKW+IHIERITREKVNGSTVNVGINP
Subjt:  MKYNPRVSSSRRKNRKAHFTAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQILRGTFKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP

Query:  SKVMITKIKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD
        SKV+ITK+KLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD
Subjt:  SKVMITKIKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD

XP_022948229.1 60S ribosomal protein L26-1-like [Cucurbita moschata]8.2e-7095.21Show/hide
Query:  MKYNPRVSSSRRKNRKAHFTAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQILRGTFKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP
        MKYNPRVSSSRRKNRKAHF+APSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQ+LRGT+KGREGKVVQVYRRKWVIHIER+TREKVNGSTVNVG+NP
Subjt:  MKYNPRVSSSRRKNRKAHFTAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQILRGTFKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP

Query:  SKVMITKIKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD
        SKVMITK+KLDKDRKSLLDRKAKGRAS+DKDKGTKFTAEDIMQSVD
Subjt:  SKVMITKIKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD

TrEMBL top hitse value%identityAlignment
A0A1S3C7Q4 60S ribosomal protein L26-1-like5.2e-7095.21Show/hide
Query:  MKYNPRVSSSRRKNRKAHFTAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQILRGTFKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP
        MKYNPRVSSSRRKNRKAHF+APSSVRR+LMSAPLSGDLRSKYNVRSMPIRKDDEVQ+LRGT+KGREGKVVQVYRRKW+IHIERITREKVNGSTVNVGI P
Subjt:  MKYNPRVSSSRRKNRKAHFTAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQILRGTFKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP

Query:  SKVMITKIKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD
        SKVMITK+KLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD
Subjt:  SKVMITKIKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD

A0A5A7TS06 60S ribosomal protein L26-1-like5.2e-7095.21Show/hide
Query:  MKYNPRVSSSRRKNRKAHFTAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQILRGTFKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP
        MKYNPRVSSSRRKNRKAHF+APSSVRR+LMSAPLSGDLRSKYNVRSMPIRKDDEVQ+LRGT+KGREGKVVQVYRRKW+IHIERITREKVNGSTVNVGI P
Subjt:  MKYNPRVSSSRRKNRKAHFTAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQILRGTFKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP

Query:  SKVMITKIKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD
        SKVMITK+KLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD
Subjt:  SKVMITKIKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD

A0A6J1D6T1 60S ribosomal protein L26-1-like3.6e-7196.58Show/hide
Query:  MKYNPRVSSSRRKNRKAHFTAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQILRGTFKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP
        MKYNPRVSSSRRKNRKAHFTAPSSVRR+LMSAPLSGDLRSKYNVRSMP+RKDDEVQ+LRGT+KGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP
Subjt:  MKYNPRVSSSRRKNRKAHFTAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQILRGTFKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP

Query:  SKVMITKIKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD
        SKVMITK+KLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD
Subjt:  SKVMITKIKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD

A0A6J1G998 60S ribosomal protein L26-1-like4.0e-7095.21Show/hide
Query:  MKYNPRVSSSRRKNRKAHFTAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQILRGTFKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP
        MKYNPRVSSSRRKNRKAHF+APSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQ+LRGT+KGREGKVVQVYRRKWVIHIER+TREKVNGSTVNVG+NP
Subjt:  MKYNPRVSSSRRKNRKAHFTAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQILRGTFKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP

Query:  SKVMITKIKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD
        SKVMITK+KLDKDRKSLLDRKAKGRAS+DKDKGTKFTAEDIMQSVD
Subjt:  SKVMITKIKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD

A0A6J1L4P7 60S ribosomal protein L26-1-like4.0e-7095.21Show/hide
Query:  MKYNPRVSSSRRKNRKAHFTAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQILRGTFKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP
        MKYNPRVSSSRRKNRKAHF+APSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQ+LRGT+KGREGKVVQVYRRKWVIHIER+TREKVNGSTVNVG+NP
Subjt:  MKYNPRVSSSRRKNRKAHFTAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQILRGTFKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP

Query:  SKVMITKIKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD
        SKVMITK+KLDKDRKSLLDRKAKGRAS+DKDKGTKFTAEDIMQSVD
Subjt:  SKVMITKIKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD

SwissProt top hitse value%identityAlignment
P51414 60S ribosomal protein L26-17.5e-6686.3Show/hide
Query:  MKYNPRVSSSRRKNRKAHFTAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQILRGTFKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP
        MKYNPRV+SSRRKNRKAHFTA SS RRV+MS+PLS DLR KYNVRSMPIRKDDEVQI+RGT+KGREGKVVQVYRRKWVIHIERITREKVNG+TVNVGI P
Subjt:  MKYNPRVSSSRRKNRKAHFTAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQILRGTFKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP

Query:  SKVMITKIKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD
        SKV+ITK++LDKDRKSLL+RKAKGRA+ADK+KGTKFT+ED+MQ+VD
Subjt:  SKVMITKIKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD

P61257 60S ribosomal protein L264.7e-4466.2Show/hide
Query:  MKYNPRVSSSRRKNRKAHFTAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQILRGTFKGRE-GKVVQVYRRKWVIHIERITREKVNGSTVNVGIN
        MK+NP V+S R KNRK HF APS +RR +MS+PLS +LR KYNVRSMPIRKDDEVQ++RG +KG++ GKVVQVYR+K+VI+IER+ REK NG+TV+VGI+
Subjt:  MKYNPRVSSSRRKNRKAHFTAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQILRGTFKGRE-GKVVQVYRRKWVIHIERITREKVNGSTVNVGIN

Query:  PSKVMITKIKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDI
        PSKV+IT++KLDKDRK +L+RKAK R    K+KG K+  E I
Subjt:  PSKVMITKIKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDI

Q39411 60S ribosomal protein L262.1e-6080.69Show/hide
Query:  MKYNPRVSSSRRKNRKAHFTAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQILRGTFKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP
        MKYNPRV+SSRR+NRK HFTA SS RRV MS+PLS DLR KYNVRSMPIRKDDE QI+RGT+KGREGK+ QVYRRK VIHIER+TREKVNG+TVNVG+ P
Subjt:  MKYNPRVSSSRRKNRKAHFTAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQILRGTFKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP

Query:  SKVMITKIKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSV
        +KV+ITK++LDKDRKSLL+RKAKGRA+ADKDKGTKFTA D+MQ+V
Subjt:  SKVMITKIKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSV

Q95WA0 60S ribosomal protein L262.8e-4465.52Show/hide
Query:  MKYNPRVSSSRRKNRKAHFTAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQILRGTFKGRE-GKVVQVYRRKWVIHIERITREKVNGSTVNVGIN
        MK+N  VSS R KNRK HF APS +RR +MS+P+S +LR KYN RSMPIRKDDEVQ++RG FKG++ GKVVQVYR+K+V+HIERI REK NG+TV VGI+
Subjt:  MKYNPRVSSSRRKNRKAHFTAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQILRGTFKGRE-GKVVQVYRRKWVIHIERITREKVNGSTVNVGIN

Query:  PSKVMITKIKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQS
        PSKV+I K+K+DKDRK +LD KAK RA A  +KG K+T E +  S
Subjt:  PSKVMITKIKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQS

Q9FJX2 60S ribosomal protein L26-27.5e-6685.62Show/hide
Query:  MKYNPRVSSSRRKNRKAHFTAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQILRGTFKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP
        MK+NPRVSSSRRKNRKAHFTAPSSVRRVLMS+PLS DLR+K+NVRSMPIRKDDEVQ++RGTFKGREGKV+QVYRRKWVIHIERITREKVNGSTVNVG+N 
Subjt:  MKYNPRVSSSRRKNRKAHFTAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQILRGTFKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP

Query:  SKVMITKIKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD
        S VMITK++LDKDRKSLL+RKA GRA+ADK+KGTKF+AED+M++VD
Subjt:  SKVMITKIKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD

Arabidopsis top hitse value%identityAlignment
AT3G49910.1 Translation protein SH3-like family protein5.3e-6786.3Show/hide
Query:  MKYNPRVSSSRRKNRKAHFTAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQILRGTFKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP
        MKYNPRV+SSRRKNRKAHFTA SS RRV+MS+PLS DLR KYNVRSMPIRKDDEVQI+RGT+KGREGKVVQVYRRKWVIHIERITREKVNG+TVNVGI P
Subjt:  MKYNPRVSSSRRKNRKAHFTAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQILRGTFKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP

Query:  SKVMITKIKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD
        SKV+ITK++LDKDRKSLL+RKAKGRA+ADK+KGTKFT+ED+MQ+VD
Subjt:  SKVMITKIKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD

AT5G67510.1 Translation protein SH3-like family protein5.3e-6785.62Show/hide
Query:  MKYNPRVSSSRRKNRKAHFTAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQILRGTFKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP
        MK+NPRVSSSRRKNRKAHFTAPSSVRRVLMS+PLS DLR+K+NVRSMPIRKDDEVQ++RGTFKGREGKV+QVYRRKWVIHIERITREKVNGSTVNVG+N 
Subjt:  MKYNPRVSSSRRKNRKAHFTAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQILRGTFKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP

Query:  SKVMITKIKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD
        S VMITK++LDKDRKSLL+RKA GRA+ADK+KGTKF+AED+M++VD
Subjt:  SKVMITKIKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGTACAATCCCAGAGTCTCAAGCTCGCGCCGCAAGAATCGCAAGGCACACTTCACAGCGCCGTCGAGCGTCCGGCGGGTTCTGATGAGCGCGCCACTCTCCGGCGA
CCTCCGCTCCAAGTACAATGTCCGGTCGATGCCGATCCGCAAGGACGACGAGGTTCAGATCCTGAGAGGAACCTTCAAAGGCCGTGAAGGAAAGGTCGTTCAGGTCTACC
GTCGGAAGTGGGTGATTCACATCGAGCGGATCACCAGGGAGAAGGTGAACGGCTCCACCGTCAACGTCGGAATCAATCCGTCGAAGGTTATGATCACGAAGATTAAGTTG
GACAAGGACAGGAAATCGCTGCTTGATCGTAAGGCGAAGGGCCGTGCTTCTGCTGATAAGGATAAGGGCACTAAATTCACTGCTGAGGATATTATGCAAAGCGTCGACTA
G
mRNA sequenceShow/hide mRNA sequence
ATGAAGTACAATCCCAGAGTCTCAAGCTCGCGCCGCAAGAATCGCAAGGCACACTTCACAGCGCCGTCGAGCGTCCGGCGGGTTCTGATGAGCGCGCCACTCTCCGGCGA
CCTCCGCTCCAAGTACAATGTCCGGTCGATGCCGATCCGCAAGGACGACGAGGTTCAGATCCTGAGAGGAACCTTCAAAGGCCGTGAAGGAAAGGTCGTTCAGGTCTACC
GTCGGAAGTGGGTGATTCACATCGAGCGGATCACCAGGGAGAAGGTGAACGGCTCCACCGTCAACGTCGGAATCAATCCGTCGAAGGTTATGATCACGAAGATTAAGTTG
GACAAGGACAGGAAATCGCTGCTTGATCGTAAGGCGAAGGGCCGTGCTTCTGCTGATAAGGATAAGGGCACTAAATTCACTGCTGAGGATATTATGCAAAGCGTCGACTA
GTTTTGATCTGGATTCGGATCCCACATAAAGAGAGGGAGTTGACTGAACATCTCAACCATTAACGAGAATTTTGTTCACATTCAATCCCCCATTCTTTTTTACCGCATGT
GTTGGGTGAATTGTGACCTCGTAGCATGTGTCAGGTGAGCAACAACCAACTTTAAAAAATATTTAAGCATTTCTTTTCTCTATCTCATTACAACAGATTTATTATGGTTG
ATATAAAAGTTAGCGAATCA
Protein sequenceShow/hide protein sequence
MKYNPRVSSSRRKNRKAHFTAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQILRGTFKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVMITKIKL
DKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD