; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0027802 (gene) of Chayote v1 genome

Gene IDSed0027802
OrganismSechium edule (Chayote v1)
Description50S ribosomal protein L12, chloroplastic-like
Genome locationLG06:4701533..4702476
RNA-Seq ExpressionSed0027802
SyntenySed0027802
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005840 - ribosome (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR000206 - Ribosomal protein L7/L12
IPR008932 - Ribosomal protein L7/L12, oligomerisation
IPR013823 - Ribosomal protein L7/L12, C-terminal
IPR014719 - Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like
IPR036235 - Ribosomal protein L7/L12, oligomerisation domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6588957.1 50S ribosomal protein L12-1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]2.9e-6783.25Show/hide
Query:  MASTLSTASLRFP---SSSFPSNLSNSTKPTSLHLPFSFSATNPPLRLLHLRPISAAAVPEKVAEIGDVISKLTLEEARTLVDYLQEKLGVSAASFAPAA
        MASTLSTASL+FP   SSSFPS  S+S K  SLH P S S++N  LRL+HLRP+SA AVPEKV EIGDVISKLTLEEAR LVDYLQ+KLGVSAA+FAPAA
Subjt:  MASTLSTASLRFP---SSSFPSNLSNSTKPTSLHLPFSFSATNPPLRLLHLRPISAAAVPEKVAEIGDVISKLTLEEARTLVDYLQEKLGVSAASFAPAA

Query:  VAVAPGAAGGEDAAAAAVEEKTEFDVVIESVPANARITVIKAVRALTSLALKEAKDLIEGLPKKFKEGISKEEAEDAKKQLEEAGATIAIV
        V VAPG+AGGED AAAAVEEKTEFDVVIE VP+NARI VIKAVRALTSLALKEAK+LIEGLPKKFKEGISKEEAEDAKKQLEEAGA IAIV
Subjt:  VAVAPGAAGGEDAAAAAVEEKTEFDVVIESVPANARITVIKAVRALTSLALKEAKDLIEGLPKKFKEGISKEEAEDAKKQLEEAGATIAIV

KAG7022725.1 50S ribosomal protein L12, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]2.2e-6783.25Show/hide
Query:  MASTLSTASLRFP---SSSFPSNLSNSTKPTSLHLPFSFSATNPPLRLLHLRPISAAAVPEKVAEIGDVISKLTLEEARTLVDYLQEKLGVSAASFAPAA
        MASTLSTASL+FP   SSSFPS  S+S K  SLH P S S++N  LRL+HLRP+SA AVPEKV EIGDVISKLTLEEAR LVDYLQ+KLGVSAA+FAPAA
Subjt:  MASTLSTASLRFP---SSSFPSNLSNSTKPTSLHLPFSFSATNPPLRLLHLRPISAAAVPEKVAEIGDVISKLTLEEARTLVDYLQEKLGVSAASFAPAA

Query:  VAVAPGAAGGEDAAAAAVEEKTEFDVVIESVPANARITVIKAVRALTSLALKEAKDLIEGLPKKFKEGISKEEAEDAKKQLEEAGATIAIV
        V VAPG+AGGED AAAAVEEKTEFDVVIE VP+NARI VIKAVRALTSLALKEAK+LIEGLPKKFKEGISKEEAEDAKKQLEEAGA IAIV
Subjt:  VAVAPGAAGGEDAAAAAVEEKTEFDVVIESVPANARITVIKAVRALTSLALKEAKDLIEGLPKKFKEGISKEEAEDAKKQLEEAGATIAIV

XP_008443526.1 PREDICTED: 50S ribosomal protein L12, chloroplastic-like [Cucumis melo]1.4e-6984.46Show/hide
Query:  MASTLSTASLRFP-----SSSFPSNLSNSTKPTSLHLPFSFSATNPPLRLLHLRPISAAAVPEKVAEIGDVISKLTLEEARTLVDYLQEKLGVSAASFAP
        M+STLSTASLR P     SSS+PSN S+S KPT L  PFSF+ TN  LRL+H RPISA AVPEKV+EIGDVISKLTLEEARTLVDYLQEKLGVSAASFAP
Subjt:  MASTLSTASLRFP-----SSSFPSNLSNSTKPTSLHLPFSFSATNPPLRLLHLRPISAAAVPEKVAEIGDVISKLTLEEARTLVDYLQEKLGVSAASFAP

Query:  AAVAVAPGAAGGEDAAAAAVEEKTEFDVVIESVPANARITVIKAVRALTSLALKEAKDLIEGLPKKFKEGISKEEAEDAKKQLEEAGATIAIV
        AAVAVAPGAA G D AAAAVEEKTEFDVVIE VP+NARI VIKAVRALTSLALKEAK+LIEGLPKKFKEGISKEEAEDAKKQLEEAGA IAIV
Subjt:  AAVAVAPGAAGGEDAAAAAVEEKTEFDVVIESVPANARITVIKAVRALTSLALKEAKDLIEGLPKKFKEGISKEEAEDAKKQLEEAGATIAIV

XP_022152130.1 50S ribosomal protein L12, chloroplastic-like [Momordica charantia]1.3e-6783.25Show/hide
Query:  MASTLSTASLRFP---SSSFPSNLSNSTKPTSLHLPFSFSATNPPLRLLHLRPISAAAVPEKVAEIGDVISKLTLEEARTLVDYLQEKLGVSAASFAPAA
        MASTLSTASLR P   SSS+PSN S S +P SLH PFS S+ N   RL+HLRP+SAAA PEKV EIGDVISKLTLEEAR LVDYLQEKLGVSAA+FAPAA
Subjt:  MASTLSTASLRFP---SSSFPSNLSNSTKPTSLHLPFSFSATNPPLRLLHLRPISAAAVPEKVAEIGDVISKLTLEEARTLVDYLQEKLGVSAASFAPAA

Query:  VAVAPGAAGGEDAAAAAVEEKTEFDVVIESVPANARITVIKAVRALTSLALKEAKDLIEGLPKKFKEGISKEEAEDAKKQLEEAGATIAIV
        VAVAPGA  G D AAAAVEEKTEFDVVIE VP+NARI VIKAVRALTSLALKEAK+LIEGLPKKFKEGISKEEAEDAKKQLEEAGA IAIV
Subjt:  VAVAPGAAGGEDAAAAAVEEKTEFDVVIESVPANARITVIKAVRALTSLALKEAKDLIEGLPKKFKEGISKEEAEDAKKQLEEAGATIAIV

XP_038903222.1 50S ribosomal protein L12, chloroplastic-like [Benincasa hispida]1.8e-6984.82Show/hide
Query:  MASTLSTASLRFPS---SSFPSNLSNSTKPTSLHLPFSFSATNPPLRLLHLRPISAAAVPEKVAEIGDVISKLTLEEARTLVDYLQEKLGVSAASFAPAA
        M+STLSTASLR PS   SS+PSN S+S KPT L+ PFSFS+TN  LRL+H RPISA AVPEKV+EIGDVIS+LTLEEARTLVDYLQEKLGVSAASFAPA 
Subjt:  MASTLSTASLRFPS---SSFPSNLSNSTKPTSLHLPFSFSATNPPLRLLHLRPISAAAVPEKVAEIGDVISKLTLEEARTLVDYLQEKLGVSAASFAPAA

Query:  VAVAPGAAGGEDAAAAAVEEKTEFDVVIESVPANARITVIKAVRALTSLALKEAKDLIEGLPKKFKEGISKEEAEDAKKQLEEAGATIAIV
        VAVAPGAA G D AAAAVEEKTEFDVVIE VP+NARI VIKAVRALTSLALKEAK+LIEGLPKKFKEGISKEEAEDAKKQLEEAGA IAIV
Subjt:  VAVAPGAAGGEDAAAAAVEEKTEFDVVIESVPANARITVIKAVRALTSLALKEAKDLIEGLPKKFKEGISKEEAEDAKKQLEEAGATIAIV

TrEMBL top hitse value%identityAlignment
A0A0A0LHZ4 Ribosomal protein L12-C1.8e-6782.2Show/hide
Query:  MASTLSTASLRFP---SSSFPSNLSNSTKPTSLHLPFSFSATNPPLRLLHLRPISAAAVPEKVAEIGDVISKLTLEEARTLVDYLQEKLGVSAASFAPAA
        M+STLSTASLR P   SSS+PSN S+S KPT L  PFSF+ TN  LRL+H RPISA AVPEKV+EIGDVISKLTLEEARTLVDYLQEKLGVSAASFAPA 
Subjt:  MASTLSTASLRFP---SSSFPSNLSNSTKPTSLHLPFSFSATNPPLRLLHLRPISAAAVPEKVAEIGDVISKLTLEEARTLVDYLQEKLGVSAASFAPAA

Query:  VAVAPGAAGGEDAAAAAVEEKTEFDVVIESVPANARITVIKAVRALTSLALKEAKDLIEGLPKKFKEGISKEEAEDAKKQLEEAGATIAIV
          VAPG A G D AAAAVEEKTEFDVVIE VP+NARI VIK+VRALTSLALKEAK+LIEGLPKKFKEGISKEEAEDAKKQLEEAGA I+IV
Subjt:  VAVAPGAAGGEDAAAAAVEEKTEFDVVIESVPANARITVIKAVRALTSLALKEAKDLIEGLPKKFKEGISKEEAEDAKKQLEEAGATIAIV

A0A1S3B8B3 50S ribosomal protein L12, chloroplastic-like6.7e-7084.46Show/hide
Query:  MASTLSTASLRFP-----SSSFPSNLSNSTKPTSLHLPFSFSATNPPLRLLHLRPISAAAVPEKVAEIGDVISKLTLEEARTLVDYLQEKLGVSAASFAP
        M+STLSTASLR P     SSS+PSN S+S KPT L  PFSF+ TN  LRL+H RPISA AVPEKV+EIGDVISKLTLEEARTLVDYLQEKLGVSAASFAP
Subjt:  MASTLSTASLRFP-----SSSFPSNLSNSTKPTSLHLPFSFSATNPPLRLLHLRPISAAAVPEKVAEIGDVISKLTLEEARTLVDYLQEKLGVSAASFAP

Query:  AAVAVAPGAAGGEDAAAAAVEEKTEFDVVIESVPANARITVIKAVRALTSLALKEAKDLIEGLPKKFKEGISKEEAEDAKKQLEEAGATIAIV
        AAVAVAPGAA G D AAAAVEEKTEFDVVIE VP+NARI VIKAVRALTSLALKEAK+LIEGLPKKFKEGISKEEAEDAKKQLEEAGA IAIV
Subjt:  AAVAVAPGAAGGEDAAAAAVEEKTEFDVVIESVPANARITVIKAVRALTSLALKEAKDLIEGLPKKFKEGISKEEAEDAKKQLEEAGATIAIV

A0A5A7UJJ4 50S ribosomal protein L126.7e-7084.46Show/hide
Query:  MASTLSTASLRFP-----SSSFPSNLSNSTKPTSLHLPFSFSATNPPLRLLHLRPISAAAVPEKVAEIGDVISKLTLEEARTLVDYLQEKLGVSAASFAP
        M+STLSTASLR P     SSS+PSN S+S KPT L  PFSF+ TN  LRL+H RPISA AVPEKV+EIGDVISKLTLEEARTLVDYLQEKLGVSAASFAP
Subjt:  MASTLSTASLRFP-----SSSFPSNLSNSTKPTSLHLPFSFSATNPPLRLLHLRPISAAAVPEKVAEIGDVISKLTLEEARTLVDYLQEKLGVSAASFAP

Query:  AAVAVAPGAAGGEDAAAAAVEEKTEFDVVIESVPANARITVIKAVRALTSLALKEAKDLIEGLPKKFKEGISKEEAEDAKKQLEEAGATIAIV
        AAVAVAPGAA G D AAAAVEEKTEFDVVIE VP+NARI VIKAVRALTSLALKEAK+LIEGLPKKFKEGISKEEAEDAKKQLEEAGA IAIV
Subjt:  AAVAVAPGAAGGEDAAAAAVEEKTEFDVVIESVPANARITVIKAVRALTSLALKEAKDLIEGLPKKFKEGISKEEAEDAKKQLEEAGATIAIV

A0A6J1DD25 50S ribosomal protein L12, chloroplastic-like6.3e-6883.25Show/hide
Query:  MASTLSTASLRFP---SSSFPSNLSNSTKPTSLHLPFSFSATNPPLRLLHLRPISAAAVPEKVAEIGDVISKLTLEEARTLVDYLQEKLGVSAASFAPAA
        MASTLSTASLR P   SSS+PSN S S +P SLH PFS S+ N   RL+HLRP+SAAA PEKV EIGDVISKLTLEEAR LVDYLQEKLGVSAA+FAPAA
Subjt:  MASTLSTASLRFP---SSSFPSNLSNSTKPTSLHLPFSFSATNPPLRLLHLRPISAAAVPEKVAEIGDVISKLTLEEARTLVDYLQEKLGVSAASFAPAA

Query:  VAVAPGAAGGEDAAAAAVEEKTEFDVVIESVPANARITVIKAVRALTSLALKEAKDLIEGLPKKFKEGISKEEAEDAKKQLEEAGATIAIV
        VAVAPGA  G D AAAAVEEKTEFDVVIE VP+NARI VIKAVRALTSLALKEAK+LIEGLPKKFKEGISKEEAEDAKKQLEEAGA IAIV
Subjt:  VAVAPGAAGGEDAAAAAVEEKTEFDVVIESVPANARITVIKAVRALTSLALKEAKDLIEGLPKKFKEGISKEEAEDAKKQLEEAGATIAIV

A0A6J1F403 50S ribosomal protein L12, chloroplastic-like1.8e-6782.72Show/hide
Query:  MASTLSTASLRFP---SSSFPSNLSNSTKPTSLHLPFSFSATNPPLRLLHLRPISAAAVPEKVAEIGDVISKLTLEEARTLVDYLQEKLGVSAASFAPAA
        M+S LSTASLRFP   SSS+PSN S+S + TS+  PFSFS+TN  LR +H RP+SAAAVPEKV EIGDVISKLTLEEARTLVDYLQEKLGVSAA+FAPAA
Subjt:  MASTLSTASLRFP---SSSFPSNLSNSTKPTSLHLPFSFSATNPPLRLLHLRPISAAAVPEKVAEIGDVISKLTLEEARTLVDYLQEKLGVSAASFAPAA

Query:  VAVAPGAAGGEDAAAAAVEEKTEFDVVIESVPANARITVIKAVRALTSLALKEAKDLIEGLPKKFKEGISKEEAEDAKKQLEEAGATIAIV
        V VAPGAA G D  AAAVEEKTEFDVVIE VP+NARI+VIKAVRALTSLALKEAK+LIEGLPKKFKEGISKEEAEDAKKQLEEAGA IAIV
Subjt:  VAVAPGAAGGEDAAAAAVEEKTEFDVVIESVPANARITVIKAVRALTSLALKEAKDLIEGLPKKFKEGISKEEAEDAKKQLEEAGATIAIV

SwissProt top hitse value%identityAlignment
P02398 50S ribosomal protein L12, chloroplastic6.5e-4661.14Show/hide
Query:  MASTLSTASLRFPS-SSFPSNLSNSTKPTSLHLPFSFSATNP----PLRLLHLRPISAAAVPEKVAEIGDVISKLTLEEARTLVDYLQEKLGVSAASFAP
        MA+T + A+L  PS +S P++ +    P  L  PF  + TNP      R   LRPI+A   PEK+ ++G  +S LTLEEAR LVD+LQ+KLGVSAASFAP
Subjt:  MASTLSTASLRFPS-SSFPSNLSNSTKPTSLHLPFSFSATNP----PLRLLHLRPISAAAVPEKVAEIGDVISKLTLEEARTLVDYLQEKLGVSAASFAP

Query:  AAVAVAPGAAGGEDAAAAAVEEKTEFDVVIESVPANARITVIKAVRALTSLALKEAKDLIEGLPKKFKEGISKEEAEDAKKQLEEAGATIAIV
        AA   APGA      AA AVEEKTEFDV I+ VP+NARI+VIKAVRALTSL LKEAK+LIEGLPKK KEG+SK++AEDAKKQLE+AGA ++IV
Subjt:  AAVAVAPGAAGGEDAAAAAVEEKTEFDVVIESVPANARITVIKAVRALTSLALKEAKDLIEGLPKKFKEGISKEEAEDAKKQLEEAGATIAIV

P24929 50S ribosomal protein L12, chloroplastic3.1e-4864.1Show/hide
Query:  MASTLSTASLRFPSSSFPSNLSNSTKPTSLHLPFSFSATNPPLRL--LH------LRPISAAAVPEKVAEIGDVISKLTLEEARTLVDYLQEKLGVSAAS
        MASTLST +LR PS S  S+       T   +PF   A   P+R   LH      LRP++A   PEKV ++GD IS LTL +A+ LV+YLQ+KLGV+AAS
Subjt:  MASTLSTASLRFPSSSFPSNLSNSTKPTSLHLPFSFSATNPPLRL--LH------LRPISAAAVPEKVAEIGDVISKLTLEEARTLVDYLQEKLGVSAAS

Query:  FAPAAVAVAPGAAGGEDAAAAAVEEKTEFDVVIESVPANARITVIKAVRALTSLALKEAKDLIEGLPKKFKEGISKEEAEDAKKQLEEAGATIAI
        FAPAAVA APGAA     A A VEEKTEFDVVI+ VP+NARI  IKAVRALTSLALKEAK+LIEGLPKKFKEG+SK+EAEDAKKQLEEAGA ++I
Subjt:  FAPAAVAVAPGAAGGEDAAAAAVEEKTEFDVVIESVPANARITVIKAVRALTSLALKEAKDLIEGLPKKFKEGISKEEAEDAKKQLEEAGATIAI

P36210 50S ribosomal protein L12-1, chloroplastic1.8e-4360.1Show/hide
Query:  MASTLSTASLRFPSSSFPSNLSNS---TKPTSLHLPFSF---SATNPPLRLLHLRPISAAAVPEKVAEIGDVISKLTLEEARTLVDYLQEKLGVSAASFA
        MAST  + +    SSS+P+  S +   ++ T++  P  F   S++    R  HLRPI+A   PEK+ +IG  IS LTLEEAR LVDYLQ+K GVS  S A
Subjt:  MASTLSTASLRFPSSSFPSNLSNS---TKPTSLHLPFSF---SATNPPLRLLHLRPISAAAVPEKVAEIGDVISKLTLEEARTLVDYLQEKLGVSAASFA

Query:  PAAVAVAPGAAGGEDAAAAAVEEKTEFDVVIESVPANARITVIKAVRALTSLALKEAKDLIEGLPKKFKEGISKEEAEDAKKQLEEAGATIAI
        PAA AVA  A GG   AAA VEE+TEFDVVI  VP+++RI VIKAVRALTSLALKEAK+LIEGLPKKFKEGI+K+EAE+AKK LEEAGA ++I
Subjt:  PAAVAVAPGAAGGEDAAAAAVEEKTEFDVVIESVPANARITVIKAVRALTSLALKEAKDLIEGLPKKFKEGISKEEAEDAKKQLEEAGATIAI

P36212 50S ribosomal protein L12-3, chloroplastic2.7e-4461.58Show/hide
Query:  MASTLSTASLRFPSSSFPSNLSNS---TKPTSLHLPFSFSATNPPLRLLHLRPISAAAVPEKVAEIGDVISKLTLEEARTLVDYLQEKLGVSAASFAPAA
        MAST  + +    SSS  ++ S     +KPT++  PF  S+++   R ++LRPISA   PEK+ +IG  IS LTLEEAR LVDYLQ+K GVS  S APAA
Subjt:  MASTLSTASLRFPSSSFPSNLSNS---TKPTSLHLPFSFSATNPPLRLLHLRPISAAAVPEKVAEIGDVISKLTLEEARTLVDYLQEKLGVSAASFAPAA

Query:  VAVAPGAAGGEDAAAAAVEEKTEFDVVIESVPANARITVIKAVRALTSLALKEAKDLIEGLPKKFKEGISKEEAEDAKKQLEEAGATIAI
         AVA  A GG   AAA VEE+TEFDVVI  VP+++RI VIKAVRALTSLALKEAK+LIEGLPKKFKEGI+K+EAE+AKK LEEAGA ++I
Subjt:  VAVAPGAAGGEDAAAAAVEEKTEFDVVIESVPANARITVIKAVRALTSLALKEAKDLIEGLPKKFKEGISKEEAEDAKKQLEEAGATIAI

P36688 50S ribosomal protein L12, chloroplastic5.9e-4762.56Show/hide
Query:  MASTLSTASLRFPSSSFPSNLSNSTKPTSLHLPF-----SFSATNPPL---RLLHLRPISAAAVPEKVAEIGDVISKLTLEEARTLVDYLQEKLGVSAAS
        MASTLST +LR PS S       +   T   +PF      F    P L   R   LRP++A   PEKV ++GD IS LTL +A+ LV+YLQ+KLGV+AAS
Subjt:  MASTLSTASLRFPSSSFPSNLSNSTKPTSLHLPF-----SFSATNPPL---RLLHLRPISAAAVPEKVAEIGDVISKLTLEEARTLVDYLQEKLGVSAAS

Query:  FAPAAVAVAPGAAGGEDAAAAAVEEKTEFDVVIESVPANARITVIKAVRALTSLALKEAKDLIEGLPKKFKEGISKEEAEDAKKQLEEAGATIAI
        FAPAAV  APGAA     A A VEEKTEFDVVI+ VP+NARI  IKAVRALTSLALKEAK+LIEGLPKKFKEG+SK+EAEDAKKQLEEAGA ++I
Subjt:  FAPAAVAVAPGAAGGEDAAAAAVEEKTEFDVVIESVPANARITVIKAVRALTSLALKEAKDLIEGLPKKFKEGISKEEAEDAKKQLEEAGATIAI

Arabidopsis top hitse value%identityAlignment
AT1G70190.1 Ribosomal protein L7/L12, oligomerisation;Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like9.1e-1135.21Show/hide
Query:  EKVAEIGDVISKLTLEEARTLVDYLQEKLGVSAASFAPAAVAVAPGAAGG------------EDAAAAAVEEKTEFDVVIESVPANARITVIKAVRALTS
        ++V  + D IS LTL E   L   + +K G++     P    + PGA GG               +  A  EKT F++ +ES  A+A+I +IK +R+ T 
Subjt:  EKVAEIGDVISKLTLEEARTLVDYLQEKLGVSAASFAPAAVAVAPGAAGG------------EDAAAAAVEEKTEFDVVIESVPANARITVIKAVRALTS

Query:  LALKEAKDLIEGLPKKFKEGISKEEAEDAKKQLEEAGATIAI
        L LKEAK L+E  P   K G+SKEE E   ++L+  GA + +
Subjt:  LALKEAKDLIEGLPKKFKEGISKEEAEDAKKQLEEAGATIAI

AT3G27830.1 ribosomal protein L12-A1.3e-4460.1Show/hide
Query:  MASTLSTASLRFPSSSFPSNLSNS---TKPTSLHLPFSF---SATNPPLRLLHLRPISAAAVPEKVAEIGDVISKLTLEEARTLVDYLQEKLGVSAASFA
        MAST  + +    SSS+P+  S +   ++ T++  P  F   S++    R  HLRPI+A   PEK+ +IG  IS LTLEEAR LVDYLQ+K GVS  S A
Subjt:  MASTLSTASLRFPSSSFPSNLSNS---TKPTSLHLPFSF---SATNPPLRLLHLRPISAAAVPEKVAEIGDVISKLTLEEARTLVDYLQEKLGVSAASFA

Query:  PAAVAVAPGAAGGEDAAAAAVEEKTEFDVVIESVPANARITVIKAVRALTSLALKEAKDLIEGLPKKFKEGISKEEAEDAKKQLEEAGATIAI
        PAA AVA  A GG   AAA VEE+TEFDVVI  VP+++RI VIKAVRALTSLALKEAK+LIEGLPKKFKEGI+K+EAE+AKK LEEAGA ++I
Subjt:  PAAVAVAPGAAGGEDAAAAAVEEKTEFDVVIESVPANARITVIKAVRALTSLALKEAKDLIEGLPKKFKEGISKEEAEDAKKQLEEAGATIAI

AT3G27840.1 ribosomal protein L12-B1.1e-3751.28Show/hide
Query:  MASTLSTASLRFPSSSFPSNLSNS----TKPTSLHLPFSF---SATNPPLRLLHLRPISAAAVPEKVAEIGDVISKLTLEEARTLVDYLQEKLGVSAASF
        MA+T  + +    SSSF S L+++    ++P S+  PFSF   S++    R ++L PISA   P+K+ +IG  IS LTLEE+R LVDY+Q+K GVS    
Subjt:  MASTLSTASLRFPSSSFPSNLSNS----TKPTSLHLPFSF---SATNPPLRLLHLRPISAAAVPEKVAEIGDVISKLTLEEARTLVDYLQEKLGVSAASF

Query:  APAAVAVAPGAAGGEDAAAAAVEEKTEFDVVIESVPANARITVIKAVRALTSLALKEAKDLIEGLPKKFKEGISKEEAEDAKKQLEEAGATIAIV
        APAA A+ P    G   A A+VE +T FDVVI  VP   RI VI A+RA+TSL+L E+K+LIEG PKKFKEG++K+EAE+ K QLEEAGA ++IV
Subjt:  APAAVAVAPGAAGGEDAAAAAVEEKTEFDVVIESVPANARITVIKAVRALTSLALKEAKDLIEGLPKKFKEGISKEEAEDAKKQLEEAGATIAIV

AT3G27850.1 ribosomal protein L12-C1.9e-4561.58Show/hide
Query:  MASTLSTASLRFPSSSFPSNLSNS---TKPTSLHLPFSFSATNPPLRLLHLRPISAAAVPEKVAEIGDVISKLTLEEARTLVDYLQEKLGVSAASFAPAA
        MAST  + +    SSS  ++ S     +KPT++  PF  S+++   R ++LRPISA   PEK+ +IG  IS LTLEEAR LVDYLQ+K GVS  S APAA
Subjt:  MASTLSTASLRFPSSSFPSNLSNS---TKPTSLHLPFSFSATNPPLRLLHLRPISAAAVPEKVAEIGDVISKLTLEEARTLVDYLQEKLGVSAASFAPAA

Query:  VAVAPGAAGGEDAAAAAVEEKTEFDVVIESVPANARITVIKAVRALTSLALKEAKDLIEGLPKKFKEGISKEEAEDAKKQLEEAGATIAI
         AVA  A GG   AAA VEE+TEFDVVI  VP+++RI VIKAVRALTSLALKEAK+LIEGLPKKFKEGI+K+EAE+AKK LEEAGA ++I
Subjt:  VAVAPGAAGGEDAAAAAVEEKTEFDVVIESVPANARITVIKAVRALTSLALKEAKDLIEGLPKKFKEGISKEEAEDAKKQLEEAGATIAI

AT4G36420.1 Ribosomal protein L12 family protein1.4e-1440.41Show/hide
Query:  SAAAVPEKVAEIGDVISKLTLEEARTLVDYLQEKLGVSAASFAPAAVAVAPG----------AAGGEDAAAAAVEEKTEFDVVIESVPANARITVIKAVR
        S A   E V++I + +S LTL E   L + L++KL +S     P   A+ PG          +AGGE       E KT FDV++++  A ++I VIK VR
Subjt:  SAAAVPEKVAEIGDVISKLTLEEARTLVDYLQEKLGVSAASFAPAAVAVAPG----------AAGGEDAAAAAVEEKTEFDVVIESVPANARITVIKAVR

Query:  ALTSLALKEAKDLIEGLPKKFKEGISKEEAEDAKKQLEEAGATIAI
         +T+L LKEAKDL+E  P   K+G+SKEEAE   ++L+  GA +A+
Subjt:  ALTSLALKEAKDLIEGLPKKFKEGISKEEAEDAKKQLEEAGATIAI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCACTCTCTCCACAGCTTCTCTCCGATTCCCATCTTCTTCTTTCCCTTCAAATCTCTCCAATTCCACCAAACCCACTTCTCTCCATCTCCCCTTTTCATTCTC
CGCCACCAACCCCCCTCTCCGCCTCCTTCATCTCCGCCCAATCTCCGCCGCCGCCGTGCCGGAAAAGGTTGCAGAAATCGGCGATGTCATCTCCAAATTGACGCTCGAGG
AGGCTCGAACCCTCGTCGATTACCTCCAAGAGAAGCTCGGTGTGTCCGCTGCTTCCTTCGCCCCTGCCGCCGTCGCCGTCGCTCCTGGCGCTGCCGGCGGCGAGGATGCG
GCCGCCGCCGCCGTCGAGGAGAAGACGGAGTTTGACGTGGTTATTGAGTCTGTGCCGGCGAATGCGAGGATTACTGTGATTAAGGCTGTTAGGGCTTTGACGAGCTTGGC
GTTGAAGGAGGCTAAGGATTTAATCGAAGGTTTGCCGAAGAAGTTTAAGGAAGGAATCTCGAAGGAAGAGGCGGAGGATGCGAAGAAGCAGCTTGAAGAAGCTGGTGCGA
CCATTGCTATCGTTTGA
mRNA sequenceShow/hide mRNA sequence
CCCCAAAATCGTGTCTTCTCTTTCAGTTTTCTCACTGTAACAAAAATGGCTTCCACTCTCTCCACAGCTTCTCTCCGATTCCCATCTTCTTCTTTCCCTTCAAATCTCTC
CAATTCCACCAAACCCACTTCTCTCCATCTCCCCTTTTCATTCTCCGCCACCAACCCCCCTCTCCGCCTCCTTCATCTCCGCCCAATCTCCGCCGCCGCCGTGCCGGAAA
AGGTTGCAGAAATCGGCGATGTCATCTCCAAATTGACGCTCGAGGAGGCTCGAACCCTCGTCGATTACCTCCAAGAGAAGCTCGGTGTGTCCGCTGCTTCCTTCGCCCCT
GCCGCCGTCGCCGTCGCTCCTGGCGCTGCCGGCGGCGAGGATGCGGCCGCCGCCGCCGTCGAGGAGAAGACGGAGTTTGACGTGGTTATTGAGTCTGTGCCGGCGAATGC
GAGGATTACTGTGATTAAGGCTGTTAGGGCTTTGACGAGCTTGGCGTTGAAGGAGGCTAAGGATTTAATCGAAGGTTTGCCGAAGAAGTTTAAGGAAGGAATCTCGAAGG
AAGAGGCGGAGGATGCGAAGAAGCAGCTTGAAGAAGCTGGTGCGACCATTGCTATCGTTTGATCTCGTGGCTGGTCAGTATCTTGAATTTTCAAGGTTTATTTACAATTC
TTAGGTGTTATGGTGGAATTAGAGATGGGGTTTTTTTGTGGATTGTTAATTTGTGATTCATTTAGTTGATTTTCTGTTGATGAATGCCTCATTGTTACTGAATTTGTGTG
CTCATTTCTGTATTGCTGTAGCTGTGTTTATATGTTTTATATGTTCTGTTTTGTTGCACGTTATGTGTTTGTTAAAATGTCTACAAGAAGCTTTTCTTAGACATTCTGGT
TTAAAATTAGAGATGGGGAATTCTTTTTTCAATTGTTGATGAATGGTTTCAATTTTCTTTGAAA
Protein sequenceShow/hide protein sequence
MASTLSTASLRFPSSSFPSNLSNSTKPTSLHLPFSFSATNPPLRLLHLRPISAAAVPEKVAEIGDVISKLTLEEARTLVDYLQEKLGVSAASFAPAAVAVAPGAAGGEDA
AAAAVEEKTEFDVVIESVPANARITVIKAVRALTSLALKEAKDLIEGLPKKFKEGISKEEAEDAKKQLEEAGATIAIV