CuGenDBv2

Gene ID	Sed0027812
Organism	Sechium edule (Chayote v1)
Description	transmembrane protein 220
Genome location	LG10:2590608..2591808
RNA-Seq Expression	Sed0027812
Synteny	Sed0027812
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR029377 - TMEM220 protein

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6595075.1 hypothetical protein SDJN03_11628, partial [Cucurbita argyrosperma subsp. sororia]

4.0e-65

79.39

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Query:  MATPSKLYSSCSLLMAFLFAYSTAVQFDDSDWYLWIPLYGCACAVNLLNWDLSLEAMVYVSKATLGLGICLWVKVVAEDYVNEIAGFLSLDLSERVVREK
        MATPSKLYS CSLLMAFLFAYSTAVQF+D DWYLWIPLYGCACAVNL+NWD+SLE + YV+KATLGLGICLWVKVVAED+VN IAGF+SLDLSERVVREK
Subjt:  MATPSKLYSSCSLLMAFLFAYSTAVQFDDSDWYLWIPLYGCACAVNLLNWDLSLEAMVYVSKATLGLGICLWVKVVAEDYVNEIAGFLSLDLSERVVREK

Query:  TGSGLVVSSMILHLTAASSFSKYHRKSRIKRVIPMYISYGMAVLVAFSYGLPIFYFLVQKGQMKF
        TGSGLVVSSM+LHL A SS S   RK   +R    Y+SYGMA LVAFSYGLPIF+FL+Q G+M F
Subjt:  TGSGLVVSSMILHLTAASSFSKYHRKSRIKRVIPMYISYGMAVLVAFSYGLPIFYFLVQKGQMKF

XP_022962868.1 uncharacterized protein LOC111463236 [Cucurbita moschata]

1.1e-65

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Query:  MATPSKLYSSCSLLMAFLFAYSTAVQFDDSDWYLWIPLYGCACAVNLLNWDLSLEAMVYVSKATLGLGICLWVKVVAEDYVNEIAGFLSLDLSERVVREK
        MATPSKLYS CSLLMAFLFAYSTAVQF+D DWYLWIPLYGCACAVNLLNWD+SL+ + Y++KATLGLGICLWVKVVAED+VN IAGFLSLDLSERVVREK
Subjt:  MATPSKLYSSCSLLMAFLFAYSTAVQFDDSDWYLWIPLYGCACAVNLLNWDLSLEAMVYVSKATLGLGICLWVKVVAEDYVNEIAGFLSLDLSERVVREK

Query:  TGSGLVVSSMILHLTAASSFSKYHRKSRIKRVIPMYISYGMAVLVAFSYGLPIFYFLVQKGQMKF
        TGSGLVVSSM+LHL A SS S   RK   +RV   Y+SYGMA LVAFSYGLPIF+FL+Q G+M F
Subjt:  TGSGLVVSSMILHLTAASSFSKYHRKSRIKRVIPMYISYGMAVLVAFSYGLPIFYFLVQKGQMKF

XP_023003396.1 uncharacterized protein LOC111497019 [Cucurbita maxima]

4.0e-65

80.61

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Query:  MATPSKLYSSCSLLMAFLFAYSTAVQFDDSDWYLWIPLYGCACAVNLLNWDLSLEAMVYVSKATLGLGICLWVKVVAEDYVNEIAGFLSLDLSERVVREK
        MATPSKLYS CSLLMAFLFAYSTAVQF+D DWYLWIPLYGCACAVNLLNWD+SLE + YV+KATLGLGICLWVKVVAED+V+ IAGFLSLDLSERVVREK
Subjt:  MATPSKLYSSCSLLMAFLFAYSTAVQFDDSDWYLWIPLYGCACAVNLLNWDLSLEAMVYVSKATLGLGICLWVKVVAEDYVNEIAGFLSLDLSERVVREK

Query:  TGSGLVVSSMILHLTAASSFSKYHRKSRIKRVIPMYISYGMAVLVAFSYGLPIFYFLVQKGQMKF
        TGSGLVVSSM+LHL A SS S   RK   +RV   Y+S+GMA LVAFSYGLPIF+FLVQ G+M F
Subjt:  TGSGLVVSSMILHLTAASSFSKYHRKSRIKRVIPMYISYGMAVLVAFSYGLPIFYFLVQKGQMKF

XP_023517546.1 uncharacterized protein LOC111781274 [Cucurbita pepo subsp. pepo]

1.4e-65

80.61

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Query:  MATPSKLYSSCSLLMAFLFAYSTAVQFDDSDWYLWIPLYGCACAVNLLNWDLSLEAMVYVSKATLGLGICLWVKVVAEDYVNEIAGFLSLDLSERVVREK
        MATPSKLYS CSLLMAFLFAYSTAVQF+D DWYLWIPLYGCACAVNL+NWD+SL+ + YV+KATLGLGICLWVKVVAED+VN IAGFLSLDLSERVVREK
Subjt:  MATPSKLYSSCSLLMAFLFAYSTAVQFDDSDWYLWIPLYGCACAVNLLNWDLSLEAMVYVSKATLGLGICLWVKVVAEDYVNEIAGFLSLDLSERVVREK

Query:  TGSGLVVSSMILHLTAASSFSKYHRKSRIKRVIPMYISYGMAVLVAFSYGLPIFYFLVQKGQMKF
        TGSGLVVSSM+LHL A SS S   RK   +RV   Y+SYGMA LVAFSYGLPIF+FLVQ G+M F
Subjt:  TGSGLVVSSMILHLTAASSFSKYHRKSRIKRVIPMYISYGMAVLVAFSYGLPIFYFLVQKGQMKF

XP_038881310.1 transmembrane protein 220 isoform X2 [Benincasa hispida]

1.5e-64

78.7

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Query:  MATPSKLYSSCSLLMAFLFAYSTAVQFDDSDWYLWIPLYGCACAVNLLNWDLSLEAMVYVSKATLGLGICLWVKVVAEDYVNEIAGFLSLDLSERVVREK
        MATPSKLYS CSLLM FLFAYSTAVQF+D DWYLW+PLYGCACAVNLL W +S+EAM +V+KAT+G GICLWVKVVAEDY+N IAGFLSLDLSERVVREK
Subjt:  MATPSKLYSSCSLLMAFLFAYSTAVQFDDSDWYLWIPLYGCACAVNLLNWDLSLEAMVYVSKATLGLGICLWVKVVAEDYVNEIAGFLSLDLSERVVREK

Query:  TGSGLVVSSMILHLTAASSFS----KYHRKSRIKRVIPMYISYGMAVLVAFSYGLPIFYFLVQKGQMKF
        TGSGLVV SMILHL AASS S    + HR S+ KR  P Y++YGMA LVAFSYGLPIF FLVQKG+MKF
Subjt:  TGSGLVVSSMILHLTAASSFS----KYHRKSRIKRVIPMYISYGMAVLVAFSYGLPIFYFLVQKGQMKF

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KI28 Uncharacterized protein

9.7e-65

77.98

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Query:  MATPSKLYSSCSLLMAFLFAYSTAVQFDDSDWYLWIPLYGCACAVNLLNWDLSLEAMVYVSKATLGLGICLWVKVVAEDYVNEIAGFLSLDLSERVVREK
        MATPSKLYSSCS+LM FLFAYSTAVQF+D DWYLW+PLYGCACAVNLL W++SLEAM  V+KA +G+GICLWVKVVAEDY+N IAGFLSLDLSERVVREK
Subjt:  MATPSKLYSSCSLLMAFLFAYSTAVQFDDSDWYLWIPLYGCACAVNLLNWDLSLEAMVYVSKATLGLGICLWVKVVAEDYVNEIAGFLSLDLSERVVREK

Query:  TGSGLVVSSMILHLTAASSFSKYHR---KSRIKRVIPMYISYGMAVLVAFSYGLPIFYFLVQKGQMKF
        TGSGLVV SMILHL AASS S   R   KS+ KRV P +++YG+A LVAFSYGLPIF+FLV+KG+MKF
Subjt:  TGSGLVVSSMILHLTAASSFSKYHR---KSRIKRVIPMYISYGMAVLVAFSYGLPIFYFLVQKGQMKF

A0A1S3B186 transmembrane protein 220

8.2e-64

77.71

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Query:  MATPSKLYSSCSLLMAFLFAYSTAVQFDDSDWYLWIPLYGCACAVNLLNWDLSLEAMVYVSKATLGLGICLWVKVVAEDYVNEIAGFLSLDLSERVVREK
        MA PSKLYSSCS+LM FLFAYSTAVQF+D DWYLW+PLYGCACAVNLL W++SLEAM  V+KA +G+GICLWVKVVAEDY+N IAGFLSLDLSERVVREK
Subjt:  MATPSKLYSSCSLLMAFLFAYSTAVQFDDSDWYLWIPLYGCACAVNLLNWDLSLEAMVYVSKATLGLGICLWVKVVAEDYVNEIAGFLSLDLSERVVREK

Query:  TGSGLVVSSMILHLTAASSFS-KYHRKSRIKRVIPMYISYGMAVLVAFSYGLPIFYFLVQKGQMKF
        TGSGLVV SMILHL AASS S K    S+ KRV P +++YG+A LVAFSYGLPIF+FLV+KG+MKF
Subjt:  TGSGLVVSSMILHLTAASSFS-KYHRKSRIKRVIPMYISYGMAVLVAFSYGLPIFYFLVQKGQMKF

A0A5D3CNK6 Transmembrane protein 220

8.2e-64

77.71

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Query:  MATPSKLYSSCSLLMAFLFAYSTAVQFDDSDWYLWIPLYGCACAVNLLNWDLSLEAMVYVSKATLGLGICLWVKVVAEDYVNEIAGFLSLDLSERVVREK
        MA PSKLYSSCS+LM FLFAYSTAVQF+D DWYLW+PLYGCACAVNLL W++SLEAM  V+KA +G+GICLWVKVVAEDY+N IAGFLSLDLSERVVREK
Subjt:  MATPSKLYSSCSLLMAFLFAYSTAVQFDDSDWYLWIPLYGCACAVNLLNWDLSLEAMVYVSKATLGLGICLWVKVVAEDYVNEIAGFLSLDLSERVVREK

Query:  TGSGLVVSSMILHLTAASSFS-KYHRKSRIKRVIPMYISYGMAVLVAFSYGLPIFYFLVQKGQMKF
        TGSGLVV SMILHL AASS S K    S+ KRV P +++YG+A LVAFSYGLPIF+FLV+KG+MKF
Subjt:  TGSGLVVSSMILHLTAASSFS-KYHRKSRIKRVIPMYISYGMAVLVAFSYGLPIFYFLVQKGQMKF

A0A6J1HG20 uncharacterized protein LOC111463236

5.1e-66

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Query:  MATPSKLYSSCSLLMAFLFAYSTAVQFDDSDWYLWIPLYGCACAVNLLNWDLSLEAMVYVSKATLGLGICLWVKVVAEDYVNEIAGFLSLDLSERVVREK
        MATPSKLYS CSLLMAFLFAYSTAVQF+D DWYLWIPLYGCACAVNLLNWD+SL+ + Y++KATLGLGICLWVKVVAED+VN IAGFLSLDLSERVVREK
Subjt:  MATPSKLYSSCSLLMAFLFAYSTAVQFDDSDWYLWIPLYGCACAVNLLNWDLSLEAMVYVSKATLGLGICLWVKVVAEDYVNEIAGFLSLDLSERVVREK

Query:  TGSGLVVSSMILHLTAASSFSKYHRKSRIKRVIPMYISYGMAVLVAFSYGLPIFYFLVQKGQMKF
        TGSGLVVSSM+LHL A SS S   RK   +RV   Y+SYGMA LVAFSYGLPIF+FL+Q G+M F
Subjt:  TGSGLVVSSMILHLTAASSFSKYHRKSRIKRVIPMYISYGMAVLVAFSYGLPIFYFLVQKGQMKF

A0A6J1KP55 uncharacterized protein LOC111497019

2.0e-65

80.61

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Query:  MATPSKLYSSCSLLMAFLFAYSTAVQFDDSDWYLWIPLYGCACAVNLLNWDLSLEAMVYVSKATLGLGICLWVKVVAEDYVNEIAGFLSLDLSERVVREK
        MATPSKLYS CSLLMAFLFAYSTAVQF+D DWYLWIPLYGCACAVNLLNWD+SLE + YV+KATLGLGICLWVKVVAED+V+ IAGFLSLDLSERVVREK
Subjt:  MATPSKLYSSCSLLMAFLFAYSTAVQFDDSDWYLWIPLYGCACAVNLLNWDLSLEAMVYVSKATLGLGICLWVKVVAEDYVNEIAGFLSLDLSERVVREK

Query:  TGSGLVVSSMILHLTAASSFSKYHRKSRIKRVIPMYISYGMAVLVAFSYGLPIFYFLVQKGQMKF
        TGSGLVVSSM+LHL A SS S   RK   +RV   Y+S+GMA LVAFSYGLPIF+FLVQ G+M F
Subjt:  TGSGLVVSSMILHLTAASSFSKYHRKSRIKRVIPMYISYGMAVLVAFSYGLPIFYFLVQKGQMKF

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT2G23755.1 unknown protein

5.9e-38

50.61

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Query:  MATPSKLYSSCSLLMAFLFAYSTAVQFDDSDWYLWIPLYGCACAVNLLNWDLSLEAMVYVSKATLGLGICLWVKVVAEDYVNEIAGFLSLDLSERVVREK
        MA P  L+  CSLLMAFLFAYS +VQ +D DWY W PLY  AC VNL+N+   ++ M  + +  L LG+ L VKV+AED + E  G LSLDL+ RVVREK
Subjt:  MATPSKLYSSCSLLMAFLFAYSTAVQFDDSDWYLWIPLYGCACAVNLLNWDLSLEAMVYVSKATLGLGICLWVKVVAEDYVNEIAGFLSLDLSERVVREK

Query:  TGSGLVVSSMILHLTAASSFSKYHRKSRIKRVIPMYISYGMAVLVAFSYGLPIFYFLVQKGQMK
         GSGLV++SM+L L A+SS SK              I +GM   V F YGLP ++F ++KG++K
Subjt:  TGSGLVVSSMILHLTAASSFSKYHRKSRIKRVIPMYISYGMAVLVAFSYGLPIFYFLVQKGQMK

Sequences

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CDS sequence

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ATGGCAACACCTTCCAAGTTATACAGCAGCTGCTCTCTGTTAATGGCGTTTCTGTTTGCTTATTCCACTGCTGTTCAGTTTGATGATTCTGATTGGTATTTGTGGATTCC
ACTCTATGGATGTGCTTGTGCTGTGAATCTGCTGAACTGGGATCTCTCATTAGAAGCCATGGTTTATGTTTCCAAAGCAACATTAGGGCTTGGAATATGTTTGTGGGTGA
AGGTGGTAGCAGAGGATTATGTGAATGAAATTGCAGGTTTTCTCTCTCTAGATTTAAGTGAGAGAGTGGTGAGGGAGAAAACAGGAAGTGGGTTGGTTGTGTCTTCCATG
ATTTTACATCTCACAGCAGCATCATCATTCTCAAAATATCACAGAAAAAGTAGAATTAAAAGAGTGATTCCAATGTACATTTCATATGGAATGGCAGTGTTGGTGGCATT
TAGTTATGGACTTCCCATTTTCTACTTCTTGGTTCAAAAGGGCCAAATGAAATTCTGA

mRNA sequence

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Protein sequence

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MATPSKLYSSCSLLMAFLFAYSTAVQFDDSDWYLWIPLYGCACAVNLLNWDLSLEAMVYVSKATLGLGICLWVKVVAEDYVNEIAGFLSLDLSERVVREKTGSGLVVSSM
ILHLTAASSFSKYHRKSRIKRVIPMYISYGMAVLVAFSYGLPIFYFLVQKGQMKF

Sed0027812 (gene) of Chayote v1 genome