CuGenDBv2

Gene ID	Sed0027842
Organism	Sechium edule (Chayote v1)
Description	protein PAIR1 isoform X1
Genome location	LG02:51965687..51973442
RNA-Seq Expression	Sed0027842
Synteny	Sed0027842
Gene Ontology terms	GO:0009553 - embryo sac development (biological process) GO:0009555 - pollen development (biological process) GO:0042138 - meiotic DNA double-strand break formation (biological process) GO:0048236 - plant-type sporogenesis (biological process) GO:0051026 - chiasma assembly (biological process)
InterPro domains	IPR034546 - Protein PAIR1

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_022943725.1 protein PAIR1 isoform X1 [Cucurbita moschata]

3.8e-189

85.85

Show/hide

Query:  MRLKINKACDLSSISVLPPQSRRPNALTTGQQAPQLRSQPSQQSFSQ--ASQHGMYSQLSQNSLDEVLTNEQRFSSQDRENSIRKNSFFPPLNYSREDCQ
        MRLKINKACDLSSISVLPPQS R NALTTGQQAPQLRSQPSQQSFSQ  +S HG  SQ SQNS DEV+TNEQRFSSQDRENSI+KNSFFPPL+YSRE+CQ
Subjt:  MRLKINKACDLSSISVLPPQSRRPNALTTGQQAPQLRSQPSQQSFSQ--ASQHGMYSQLSQNSLDEVLTNEQRFSSQDRENSIRKNSFFPPLNYSREDCQ

Query:  LPLSRSSTSLTQRWKSTPPSDSKCQVDEELDRRLGNIENSLNKFGKILDSLHGDILQLNKGMKQVSLDVEGIWQKMIVNSSSLQSMNKEHEEMKGTLEGG
        LPLS+SSTSLTQRWKSTP  DSKCQV EELDRRLG IENSLNKFGKILDSLHGDIL LN+GMKQ+SLDVEGIWQK+IVNSS LQSMNKEH++MK TL+GG
Subjt:  LPLSRSSTSLTQRWKSTPPSDSKCQVDEELDRRLGNIENSLNKFGKILDSLHGDILQLNKGMKQVSLDVEGIWQKMIVNSSSLQSMNKEHEEMKGTLEGG

Query:  FKLISDQLKKDAYQERLHEISDVLSVLEKQVQTSQLKLKDDLISTFTQEMKAMACTLKNPMQKFPYHPIQSPERTTYLDVPQQKRHRCKIQPASPNVCTR
        FKLISDQLKKDAYQERLHEISDVLS LEKQVQ SQLKL++D ISTFTQEMKAM CTLK P+QKFP+ PI+SPE T  LDVPQQKR RCKIQ ASP+VC R
Subjt:  FKLISDQLKKDAYQERLHEISDVLSVLEKQVQTSQLKLKDDLISTFTQEMKAMACTLKNPMQKFPYHPIQSPERTTYLDVPQQKRHRCKIQPASPNVCTR

Query:  ETAVQNEEVGRWKSVKVGKTFCTSSVVKKKDGKKAIPFSEQQCLVLEREYRVIVDSDEEIERSFSCLIEEKKTGEDVHFYSIEDAKEETDRILRNARRQK
         TAVQ EEVGRWKSVKVGKTFCTS+V KK+D KKAIPFSEQ+ LV+EREYRVIVDSDEEIERSFSCLIEEKKTGEDV FYSIEDAKEET+RILR ARRQK
Subjt:  ETAVQNEEVGRWKSVKVGKTFCTSSVVKKKDGKKAIPFSEQQCLVLEREYRVIVDSDEEIERSFSCLIEEKKTGEDVHFYSIEDAKEETDRILRNARRQK

Query:  RKYCNPIIIN
        RKYCNPIIIN
Subjt:  RKYCNPIIIN

XP_022943732.1 protein PAIR1 isoform X2 [Cucurbita moschata]

5.5e-188

85.85

Show/hide

Query:  MRLKINKACDLSSISVLPPQSRRPNALTTGQQAPQLRSQPSQQSFSQ--ASQHGMYSQLSQNSLDEVLTNEQRFSSQDRENSIRKNSFFPPLNYSREDCQ
        MRLKINKACDLSSISVLPPQS R NALTTGQQAPQLRSQPSQQSFSQ  +S HG  SQ SQNS DEV+TNEQRFSSQDRENSI+KNSFFPPL+YSRE+CQ
Subjt:  MRLKINKACDLSSISVLPPQSRRPNALTTGQQAPQLRSQPSQQSFSQ--ASQHGMYSQLSQNSLDEVLTNEQRFSSQDRENSIRKNSFFPPLNYSREDCQ

Query:  LPLSRSSTSLTQRWKSTPPSDSKCQVDEELDRRLGNIENSLNKFGKILDSLHGDILQLNKGMKQVSLDVEGIWQKMIVNSSSLQSMNKEHEEMKGTLEGG
        LPLS+SSTSLTQRWKSTP  DSKCQV EELDRRLG IENSLNKFGKILDSLHGDIL LN+GMKQ+SLDVEGIWQK+IVNSS LQSMNKEH++MK TL+GG
Subjt:  LPLSRSSTSLTQRWKSTPPSDSKCQVDEELDRRLGNIENSLNKFGKILDSLHGDILQLNKGMKQVSLDVEGIWQKMIVNSSSLQSMNKEHEEMKGTLEGG

Query:  FKLISDQLKKDAYQERLHEISDVLSVLEKQVQTSQLKLKDDLISTFTQEMKAMACTLKNPMQKFPYHPIQSPERTTYLDVPQQKRHRCKIQPASPNVCTR
        FKLISDQLKKDAYQERLHEISDVLS LEKQVQ SQLKL++D ISTFTQEMKAM CTLK P+QKFP+ PI+SPE T  LDVPQQKR RCKIQ ASP+VC R
Subjt:  FKLISDQLKKDAYQERLHEISDVLSVLEKQVQTSQLKLKDDLISTFTQEMKAMACTLKNPMQKFPYHPIQSPERTTYLDVPQQKRHRCKIQPASPNVCTR

Query:  ETAVQNEEVGRWKSVKVGKTFCTSSVVKKKDGKKAIPFSEQQCLVLEREYRVIVDSDEEIERSFSCLIEEKKTGEDVHFYSIEDAKEETDRILRNARRQK
         TAVQ EEVGRWKSVKVGKTFCTS+V KK+D KKAIPFSEQ+ LV+EREYRVIVDSDEEIERSFSCLIEEKKTGEDV FYSIEDAKEET+RILR ARRQK
Subjt:  ETAVQNEEVGRWKSVKVGKTFCTSSVVKKKDGKKAIPFSEQQCLVLEREYRVIVDSDEEIERSFSCLIEEKKTGEDVHFYSIEDAKEETDRILRNARRQK

Query:  RKYCNPIIIN
        RKYCNPIIIN
Subjt:  RKYCNPIIIN

XP_023539314.1 protein PAIR1-like [Cucurbita pepo subsp. pepo]

3.5e-187

85.37

Show/hide

Query:  MRLKINKACDLSSISVLPPQSRRPNALTTGQQAPQLRSQPSQQSFSQ--ASQHGMYSQLSQNSLDEVLTNEQRFSSQDRENSIRKNSFFPPLNYSREDCQ
        MRLKINKACDLSSISVLPPQS R NALTTGQQAPQLRSQPSQQSFSQ  +S HG  SQ SQNS DEV+TNEQRFSSQDRENSI+KNSFFPPL+YSRE+CQ
Subjt:  MRLKINKACDLSSISVLPPQSRRPNALTTGQQAPQLRSQPSQQSFSQ--ASQHGMYSQLSQNSLDEVLTNEQRFSSQDRENSIRKNSFFPPLNYSREDCQ

Query:  LPLSRSSTSLTQRWKSTPPSDSKCQVDEELDRRLGNIENSLNKFGKILDSLHGDILQLNKGMKQVSLDVEGIWQKMIVNSSSLQSMNKEHEEMKGTLEGG
        LPLS+SSTSLTQRWKSTP  DSKCQ+ EELDRRLG IENSLNKFGKILDSLHGDIL LN+GMKQ+SLDVEGIWQK+IVNSS LQSMNKEH++MK TL+GG
Subjt:  LPLSRSSTSLTQRWKSTPPSDSKCQVDEELDRRLGNIENSLNKFGKILDSLHGDILQLNKGMKQVSLDVEGIWQKMIVNSSSLQSMNKEHEEMKGTLEGG

Query:  FKLISDQLKKDAYQERLHEISDVLSVLEKQVQTSQLKLKDDLISTFTQEMKAMACTLKNPMQKFPYHPIQSPERTTYLDVPQQKRHRCKIQPASPNVCTR
        FKLISDQLKKDAYQERLHEISDVLS LEKQVQ SQLKL++D ISTFTQEMKAM CTLK P+QKFP+ PI+SPE T  LDVPQQKR RCKIQ ASP+VC R
Subjt:  FKLISDQLKKDAYQERLHEISDVLSVLEKQVQTSQLKLKDDLISTFTQEMKAMACTLKNPMQKFPYHPIQSPERTTYLDVPQQKRHRCKIQPASPNVCTR

Query:  ETAVQNEEVGRWKSVKVGKTFCTSSVVKKKDGKKAIPFSEQQCLVLEREYRVIVDSDEEIERSFSCLIEEKKTGEDVHFYSIEDAKEETDRILRNARRQK
         TAVQ EEVGRWKSVKVGK FCTS+V+KK+D KKAIPFSEQ+ LV+EREYRVIVDSDEEIERSFSCLIEEKKTGEDV FYSIEDAKEET+RILR ARRQK
Subjt:  ETAVQNEEVGRWKSVKVGKTFCTSSVVKKKDGKKAIPFSEQQCLVLEREYRVIVDSDEEIERSFSCLIEEKKTGEDVHFYSIEDAKEETDRILRNARRQK

Query:  RKYCNPIIIN
        RKYCNPIIIN
Subjt:  RKYCNPIIIN

XP_038882627.1 putative recombination initiation defects 3 isoform X1 [Benincasa hispida]

5.3e-191

86.59

Show/hide

Query:  MRLKINKACDLSSISVLPPQSRRPNALTTGQQAPQLRSQPSQQSFSQ--ASQHGMYSQLSQNSLDEVLTNEQRFSSQDRENSIRKNSFFPPLNYSREDCQ
        MRLKINKACDLSSISVLPP SRR NALTTGQQAPQLRSQPSQQSFSQ  +SQHGMYSQLSQNS DEV+TNEQRFSSQDRENSI+KNSFFPPL+YSREDCQ
Subjt:  MRLKINKACDLSSISVLPPQSRRPNALTTGQQAPQLRSQPSQQSFSQ--ASQHGMYSQLSQNSLDEVLTNEQRFSSQDRENSIRKNSFFPPLNYSREDCQ

Query:  LPLSRSSTSLTQRWKSTPPSDSKCQVDEELDRRLGNIENSLNKFGKILDSLHGDILQLNKGMKQVSLDVEGIWQKMIVNSSSLQSMNKEHEEMKGTLEGG
        L LS+SSTSLTQRWK TP  DSKCQV EELDRRLG IENSLNKFGKILDSLH DILQLNKGMKQ+SLDVEGIWQKM+VNSSSLQSMNK+H++MK TL+GG
Subjt:  LPLSRSSTSLTQRWKSTPPSDSKCQVDEELDRRLGNIENSLNKFGKILDSLHGDILQLNKGMKQVSLDVEGIWQKMIVNSSSLQSMNKEHEEMKGTLEGG

Query:  FKLISDQLKKDAYQERLHEISDVLSVLEKQVQTSQLKLKDDLISTFTQEMKAMACTLKNPMQKFPYHPIQSPERTTYLDVPQQKRHRCKIQPASPNVCTR
        FKLIS+QLKKDAYQERL+EIS+VLS LEKQVQ SQLKLK+D ISTFTQE+KAM CTLKNP+QKFP H IQSPE T  LDVPQQKRHRCKIQ ASPNVC R
Subjt:  FKLISDQLKKDAYQERLHEISDVLSVLEKQVQTSQLKLKDDLISTFTQEMKAMACTLKNPMQKFPYHPIQSPERTTYLDVPQQKRHRCKIQPASPNVCTR

Query:  ETAVQNEEVGRWKSVKVGKTFCTSSVVKKKDGKKAIPFSEQQCLVLEREYRVIVDSDEEIERSFSCLIEEKKTGEDVHFYSIEDAKEETDRILRNARRQK
         T VQ EEVGRWKSVKVGKTFCT SV KK D KK IPFSEQQ LVLEREYRVIVDSDEEIERSFSCLIEEKKTGEDV +YSIEDAKEE+ RILR ARRQK
Subjt:  ETAVQNEEVGRWKSVKVGKTFCTSSVVKKKDGKKAIPFSEQQCLVLEREYRVIVDSDEEIERSFSCLIEEKKTGEDVHFYSIEDAKEETDRILRNARRQK

Query:  RKYCNPIIIN
        RKYCNPIIIN
Subjt:  RKYCNPIIIN

XP_038882642.1 putative recombination initiation defects 3 isoform X2 [Benincasa hispida]

2.2e-189

86.34

Show/hide

Query:  MRLKINKACDLSSISVLPPQSRRPNALTTGQQAPQLRSQPSQQSFSQ--ASQHGMYSQLSQNSLDEVLTNEQRFSSQDRENSIRKNSFFPPLNYSREDCQ
        MRLKINKACDLSSISVLPP SRR NALTTGQQAPQLRSQPSQQSFSQ  +SQHGMYSQLSQNS DEV+TNEQRFSSQDRENSI+KNSFFPPL+YSREDCQ
Subjt:  MRLKINKACDLSSISVLPPQSRRPNALTTGQQAPQLRSQPSQQSFSQ--ASQHGMYSQLSQNSLDEVLTNEQRFSSQDRENSIRKNSFFPPLNYSREDCQ

Query:  LPLSRSSTSLTQRWKSTPPSDSKCQVDEELDRRLGNIENSLNKFGKILDSLHGDILQLNKGMKQVSLDVEGIWQKMIVNSSSLQSMNKEHEEMKGTLEGG
        L LS+SSTSLTQRWK TP  DSKCQV EELDRRLG IENSLNKFGKILDSLH DILQLNKGMKQ+SLDVEGIWQKM+VNSSSLQSMNK+H++MK TL+GG
Subjt:  LPLSRSSTSLTQRWKSTPPSDSKCQVDEELDRRLGNIENSLNKFGKILDSLHGDILQLNKGMKQVSLDVEGIWQKMIVNSSSLQSMNKEHEEMKGTLEGG

Query:  FKLISDQLKKDAYQERLHEISDVLSVLEKQVQTSQLKLKDDLISTFTQEMKAMACTLKNPMQKFPYHPIQSPERTTYLDVPQQKRHRCKIQPASPNVCTR
        FKLIS+QLKKDAYQERL+EIS+VLS LEKQVQ SQLKLK+D ISTFTQE+KAM CTLKNP+QKFP H IQSPE T  LDVPQQKRHRCKIQ ASPNVC R
Subjt:  FKLISDQLKKDAYQERLHEISDVLSVLEKQVQTSQLKLKDDLISTFTQEMKAMACTLKNPMQKFPYHPIQSPERTTYLDVPQQKRHRCKIQPASPNVCTR

Query:  ETAVQNEEVGRWKSVKVGKTFCTSSVVKKKDGKKAIPFSEQQCLVLEREYRVIVDSDEEIERSFSCLIEEKKTGEDVHFYSIEDAKEETDRILRNARRQK
         T VQ EEVGRWKSVKVGKTFCT SV KK D KK IPFSEQ+ LVLEREYRVIVDSDEEIERSFSCLIEEKKTGEDV +YSIEDAKEE+ RILR ARRQK
Subjt:  ETAVQNEEVGRWKSVKVGKTFCTSSVVKKKDGKKAIPFSEQQCLVLEREYRVIVDSDEEIERSFSCLIEEKKTGEDVHFYSIEDAKEETDRILRNARRQK

Query:  RKYCNPIIIN
        RKYCNPIIIN
Subjt:  RKYCNPIIIN

TrEMBL top hits

e value

%identity

Alignment

A0A1S3AV35 protein PAIR1 isoform X2

1.4e-184

83.9

Show/hide

Query:  MRLKINKACDLSSISVLPPQSRRPNALTTGQQAPQLRSQPSQQSFSQ--ASQHGMYSQLSQNSLDEVLTNEQRFSSQDRENSIRKNSFFPPLNYSREDCQ
        MRLKINKACDLSSISVLPPQSRR NALTTGQQAPQLRSQPSQQSFSQ  +SQHGMYSQLSQNS DEV+TNEQRFSSQDRENSI+KNSFFPPL+YS+EDCQ
Subjt:  MRLKINKACDLSSISVLPPQSRRPNALTTGQQAPQLRSQPSQQSFSQ--ASQHGMYSQLSQNSLDEVLTNEQRFSSQDRENSIRKNSFFPPLNYSREDCQ

Query:  LPLSRSSTSLTQRWKSTPPSDSKCQVDEELDRRLGNIENSLNKFGKILDSLHGDILQLNKGMKQVSLDVEGIWQKMIVNSSSLQSMNKEHEEMKGTLEGG
        L LS+SSTSLTQ+W+ +P +DSKCQV EELDRRLG IENSLNKFGKILDSL  DILQLNKGMKQVSLDVE IWQKM+VNSS LQSMNK+H++MK  ++GG
Subjt:  LPLSRSSTSLTQRWKSTPPSDSKCQVDEELDRRLGNIENSLNKFGKILDSLHGDILQLNKGMKQVSLDVEGIWQKMIVNSSSLQSMNKEHEEMKGTLEGG

Query:  FKLISDQLKKDAYQERLHEISDVLSVLEKQVQTSQLKLKDDLISTFTQEMKAMACTLKNPMQKFPYHPIQSPERTTYLDVPQQKRHRCKIQPASPNVCTR
        FKLISDQLKKDAYQERLHEISD LS LEKQVQ SQLKLK+D ISTFT+EMKAM  TLK P+QKFP H IQSPERT  LDVP+QKRHRCKIQ ASPNVCT+
Subjt:  FKLISDQLKKDAYQERLHEISDVLSVLEKQVQTSQLKLKDDLISTFTQEMKAMACTLKNPMQKFPYHPIQSPERTTYLDVPQQKRHRCKIQPASPNVCTR

Query:  ETAVQNEEVGRWKSVKVGKTFCTSSVVKKKDGKKAIPFSEQQCLVLEREYRVIVDSDEEIERSFSCLIEEKKTGEDVHFYSIEDAKEETDRILRNARRQK
         TAVQ EEVG WKSVKVGK FCTSSVV + D  K IPFSEQQCLVLEREYRVIVDSDEEIERSFSCLIEEKKTG+DV +YSIE+AK+ET RILR ARRQK
Subjt:  ETAVQNEEVGRWKSVKVGKTFCTSSVVKKKDGKKAIPFSEQQCLVLEREYRVIVDSDEEIERSFSCLIEEKKTGEDVHFYSIEDAKEETDRILRNARRQK

Query:  RKYCNPIIIN
        RKY NPIIIN
Subjt:  RKYCNPIIIN

A0A6J1FTV4 protein PAIR1 isoform X2

2.6e-188

85.85

Show/hide

Query:  MRLKINKACDLSSISVLPPQSRRPNALTTGQQAPQLRSQPSQQSFSQ--ASQHGMYSQLSQNSLDEVLTNEQRFSSQDRENSIRKNSFFPPLNYSREDCQ
        MRLKINKACDLSSISVLPPQS R NALTTGQQAPQLRSQPSQQSFSQ  +S HG  SQ SQNS DEV+TNEQRFSSQDRENSI+KNSFFPPL+YSRE+CQ
Subjt:  MRLKINKACDLSSISVLPPQSRRPNALTTGQQAPQLRSQPSQQSFSQ--ASQHGMYSQLSQNSLDEVLTNEQRFSSQDRENSIRKNSFFPPLNYSREDCQ

Query:  LPLSRSSTSLTQRWKSTPPSDSKCQVDEELDRRLGNIENSLNKFGKILDSLHGDILQLNKGMKQVSLDVEGIWQKMIVNSSSLQSMNKEHEEMKGTLEGG
        LPLS+SSTSLTQRWKSTP  DSKCQV EELDRRLG IENSLNKFGKILDSLHGDIL LN+GMKQ+SLDVEGIWQK+IVNSS LQSMNKEH++MK TL+GG
Subjt:  LPLSRSSTSLTQRWKSTPPSDSKCQVDEELDRRLGNIENSLNKFGKILDSLHGDILQLNKGMKQVSLDVEGIWQKMIVNSSSLQSMNKEHEEMKGTLEGG

Query:  FKLISDQLKKDAYQERLHEISDVLSVLEKQVQTSQLKLKDDLISTFTQEMKAMACTLKNPMQKFPYHPIQSPERTTYLDVPQQKRHRCKIQPASPNVCTR
        FKLISDQLKKDAYQERLHEISDVLS LEKQVQ SQLKL++D ISTFTQEMKAM CTLK P+QKFP+ PI+SPE T  LDVPQQKR RCKIQ ASP+VC R
Subjt:  FKLISDQLKKDAYQERLHEISDVLSVLEKQVQTSQLKLKDDLISTFTQEMKAMACTLKNPMQKFPYHPIQSPERTTYLDVPQQKRHRCKIQPASPNVCTR

Query:  ETAVQNEEVGRWKSVKVGKTFCTSSVVKKKDGKKAIPFSEQQCLVLEREYRVIVDSDEEIERSFSCLIEEKKTGEDVHFYSIEDAKEETDRILRNARRQK
         TAVQ EEVGRWKSVKVGKTFCTS+V KK+D KKAIPFSEQ+ LV+EREYRVIVDSDEEIERSFSCLIEEKKTGEDV FYSIEDAKEET+RILR ARRQK
Subjt:  ETAVQNEEVGRWKSVKVGKTFCTSSVVKKKDGKKAIPFSEQQCLVLEREYRVIVDSDEEIERSFSCLIEEKKTGEDVHFYSIEDAKEETDRILRNARRQK

Query:  RKYCNPIIIN
        RKYCNPIIIN
Subjt:  RKYCNPIIIN

A0A6J1FY69 protein PAIR1 isoform X1

1.8e-189

85.85

Show/hide

Query:  MRLKINKACDLSSISVLPPQSRRPNALTTGQQAPQLRSQPSQQSFSQ--ASQHGMYSQLSQNSLDEVLTNEQRFSSQDRENSIRKNSFFPPLNYSREDCQ
        MRLKINKACDLSSISVLPPQS R NALTTGQQAPQLRSQPSQQSFSQ  +S HG  SQ SQNS DEV+TNEQRFSSQDRENSI+KNSFFPPL+YSRE+CQ
Subjt:  MRLKINKACDLSSISVLPPQSRRPNALTTGQQAPQLRSQPSQQSFSQ--ASQHGMYSQLSQNSLDEVLTNEQRFSSQDRENSIRKNSFFPPLNYSREDCQ

Query:  LPLSRSSTSLTQRWKSTPPSDSKCQVDEELDRRLGNIENSLNKFGKILDSLHGDILQLNKGMKQVSLDVEGIWQKMIVNSSSLQSMNKEHEEMKGTLEGG
        LPLS+SSTSLTQRWKSTP  DSKCQV EELDRRLG IENSLNKFGKILDSLHGDIL LN+GMKQ+SLDVEGIWQK+IVNSS LQSMNKEH++MK TL+GG
Subjt:  LPLSRSSTSLTQRWKSTPPSDSKCQVDEELDRRLGNIENSLNKFGKILDSLHGDILQLNKGMKQVSLDVEGIWQKMIVNSSSLQSMNKEHEEMKGTLEGG

Query:  FKLISDQLKKDAYQERLHEISDVLSVLEKQVQTSQLKLKDDLISTFTQEMKAMACTLKNPMQKFPYHPIQSPERTTYLDVPQQKRHRCKIQPASPNVCTR
        FKLISDQLKKDAYQERLHEISDVLS LEKQVQ SQLKL++D ISTFTQEMKAM CTLK P+QKFP+ PI+SPE T  LDVPQQKR RCKIQ ASP+VC R
Subjt:  FKLISDQLKKDAYQERLHEISDVLSVLEKQVQTSQLKLKDDLISTFTQEMKAMACTLKNPMQKFPYHPIQSPERTTYLDVPQQKRHRCKIQPASPNVCTR

Query:  ETAVQNEEVGRWKSVKVGKTFCTSSVVKKKDGKKAIPFSEQQCLVLEREYRVIVDSDEEIERSFSCLIEEKKTGEDVHFYSIEDAKEETDRILRNARRQK
         TAVQ EEVGRWKSVKVGKTFCTS+V KK+D KKAIPFSEQ+ LV+EREYRVIVDSDEEIERSFSCLIEEKKTGEDV FYSIEDAKEET+RILR ARRQK
Subjt:  ETAVQNEEVGRWKSVKVGKTFCTSSVVKKKDGKKAIPFSEQQCLVLEREYRVIVDSDEEIERSFSCLIEEKKTGEDVHFYSIEDAKEETDRILRNARRQK

Query:  RKYCNPIIIN
        RKYCNPIIIN
Subjt:  RKYCNPIIIN

A0A6J1IAP9 protein PAIR1-like isoform X2

3.2e-186

85.37

Show/hide

Query:  MRLKINKACDLSSISVLPPQSRRPNALTTGQQAPQLRSQPSQQSFSQ--ASQHGMYSQLSQNSLDEVLTNEQRFSSQDRENSIRKNSFFPPLNYSREDCQ
        MRLKINKACDLSSISVLPPQS R NALTTGQQAPQLRSQPSQQSFSQ  +S HG  SQ SQNS DEV+TNEQRFSSQDRENSI+KNSFFPPL+YSRE+CQ
Subjt:  MRLKINKACDLSSISVLPPQSRRPNALTTGQQAPQLRSQPSQQSFSQ--ASQHGMYSQLSQNSLDEVLTNEQRFSSQDRENSIRKNSFFPPLNYSREDCQ

Query:  LPLSRSSTSLTQRWKSTPPSDSKCQVDEELDRRLGNIENSLNKFGKILDSLHGDILQLNKGMKQVSLDVEGIWQKMIVNSSSLQSMNKEHEEMKGTLEGG
        LPLS+SSTSLTQRWKSTP  D KCQV EELDRRLG IENSLNKFGKILDSLHGDIL LN+GMKQ+SLDVEGIWQK+IVNSS LQSMNKEH++MK TL+GG
Subjt:  LPLSRSSTSLTQRWKSTPPSDSKCQVDEELDRRLGNIENSLNKFGKILDSLHGDILQLNKGMKQVSLDVEGIWQKMIVNSSSLQSMNKEHEEMKGTLEGG

Query:  FKLISDQLKKDAYQERLHEISDVLSVLEKQVQTSQLKLKDDLISTFTQEMKAMACTLKNPMQKFPYHPIQSPERTTYLDVPQQKRHRCKIQPASPNVCTR
        FKLISDQLKKDAYQ+RLHEISDVLS LEKQVQ SQLKLK+D IS FTQEMKAM CTLK  +QKFP+ PI+SPE T  LDVPQQKR RCKIQ ASP+VC R
Subjt:  FKLISDQLKKDAYQERLHEISDVLSVLEKQVQTSQLKLKDDLISTFTQEMKAMACTLKNPMQKFPYHPIQSPERTTYLDVPQQKRHRCKIQPASPNVCTR

Query:  ETAVQNEEVGRWKSVKVGKTFCTSSVVKKKDGKKAIPFSEQQCLVLEREYRVIVDSDEEIERSFSCLIEEKKTGEDVHFYSIEDAKEETDRILRNARRQK
         TAVQ EE+GRWKSVKVGKTFCTS+VVKK+D KKAIPFSEQ+ LVLEREYRVIVDSDEEIERSFSCLIEEKKTGEDV FYSIEDAK+ETDRILR ARRQK
Subjt:  ETAVQNEEVGRWKSVKVGKTFCTSSVVKKKDGKKAIPFSEQQCLVLEREYRVIVDSDEEIERSFSCLIEEKKTGEDVHFYSIEDAKEETDRILRNARRQK

Query:  RKYCNPIIIN
        RKYCNPIIIN
Subjt:  RKYCNPIIIN

A0A6J1IBT5 protein PAIR1-like isoform X1

2.2e-187

85.37

Show/hide

Query:  MRLKINKACDLSSISVLPPQSRRPNALTTGQQAPQLRSQPSQQSFSQ--ASQHGMYSQLSQNSLDEVLTNEQRFSSQDRENSIRKNSFFPPLNYSREDCQ
        MRLKINKACDLSSISVLPPQS R NALTTGQQAPQLRSQPSQQSFSQ  +S HG  SQ SQNS DEV+TNEQRFSSQDRENSI+KNSFFPPL+YSRE+CQ
Subjt:  MRLKINKACDLSSISVLPPQSRRPNALTTGQQAPQLRSQPSQQSFSQ--ASQHGMYSQLSQNSLDEVLTNEQRFSSQDRENSIRKNSFFPPLNYSREDCQ

Query:  LPLSRSSTSLTQRWKSTPPSDSKCQVDEELDRRLGNIENSLNKFGKILDSLHGDILQLNKGMKQVSLDVEGIWQKMIVNSSSLQSMNKEHEEMKGTLEGG
        LPLS+SSTSLTQRWKSTP  D KCQV EELDRRLG IENSLNKFGKILDSLHGDIL LN+GMKQ+SLDVEGIWQK+IVNSS LQSMNKEH++MK TL+GG
Subjt:  LPLSRSSTSLTQRWKSTPPSDSKCQVDEELDRRLGNIENSLNKFGKILDSLHGDILQLNKGMKQVSLDVEGIWQKMIVNSSSLQSMNKEHEEMKGTLEGG

Query:  FKLISDQLKKDAYQERLHEISDVLSVLEKQVQTSQLKLKDDLISTFTQEMKAMACTLKNPMQKFPYHPIQSPERTTYLDVPQQKRHRCKIQPASPNVCTR
        FKLISDQLKKDAYQ+RLHEISDVLS LEKQVQ SQLKLK+D IS FTQEMKAM CTLK  +QKFP+ PI+SPE T  LDVPQQKR RCKIQ ASP+VC R
Subjt:  FKLISDQLKKDAYQERLHEISDVLSVLEKQVQTSQLKLKDDLISTFTQEMKAMACTLKNPMQKFPYHPIQSPERTTYLDVPQQKRHRCKIQPASPNVCTR

Query:  ETAVQNEEVGRWKSVKVGKTFCTSSVVKKKDGKKAIPFSEQQCLVLEREYRVIVDSDEEIERSFSCLIEEKKTGEDVHFYSIEDAKEETDRILRNARRQK
         TAVQ EE+GRWKSVKVGKTFCTS+VVKK+D KKAIPFSEQ+ LVLEREYRVIVDSDEEIERSFSCLIEEKKTGEDV FYSIEDAK+ETDRILR ARRQK
Subjt:  ETAVQNEEVGRWKSVKVGKTFCTSSVVKKKDGKKAIPFSEQQCLVLEREYRVIVDSDEEIERSFSCLIEEKKTGEDVHFYSIEDAKEETDRILRNARRQK

Query:  RKYCNPIIIN
        RKYCNPIIIN
Subjt:  RKYCNPIIIN

SwissProt top hits

e value

%identity

Alignment

Q0WWX5 Putative recombination initiation defects 3

1.2e-65

37.8

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Query:  MRLKINKACDLSSISVLPPQSRRPNALTTGQQAPQLRSQPSQQSFSQ---ASQHGM--YSQLSQNSLDEVLTNEQRFSSQDRENSIRK-NSFFPPLNYSR
        M++ INKACDL SISV PP  RR       Q + QLRSQ SQQSFSQ   +SQ G   +SQ++Q+S+DE+L N+QRFSSQ+R+ S++K +S  PP+N+ R
Subjt:  MRLKINKACDLSSISVLPPQSRRPNALTTGQQAPQLRSQPSQQSFSQ---ASQHGM--YSQLSQNSLDEVLTNEQRFSSQDRENSIRK-NSFFPPLNYSR

Query:  EDCQLPLSRSSTSLTQRWKSTPPSDSKCQVDEELDRRLGNIENSLNKFGKILDSLHGDILQLNKGMKQVSLDVEGIWQKMIVNSSSLQSMNKEHEEMKGT
        ED QL  SRSS+ L++RW S    +SK Q+ EEL++R G +E SL++FG +LDS+  DI+Q N+G K+V L+ E I QK+ +  +SLQ + KE  + K +
Subjt:  EDCQLPLSRSSTSLTQRWKSTPPSDSKCQVDEELDRRLGNIENSLNKFGKILDSLHGDILQLNKGMKQVSLDVEGIWQKMIVNSSSLQSMNKEHEEMKGT

Query:  LEGGFKLISDQLKKDAYQERLHEISDVLSVLEKQVQTSQLKLKDDLISTFTQEMKAMA-CTLKNPMQKFPYHP---------------------IQSPER
        L+GG K I ++  KD  QE+L +I  +L+ + +QV+T+  K++ ++  TFT+E++ +A      P  + P  P                     ++ PE 
Subjt:  LEGGFKLISDQLKKDAYQERLHEISDVLSVLEKQVQTSQLKLKDDLISTFTQEMKAMA-CTLKNPMQKFPYHP---------------------IQSPER

Query:  TTYLDVPQQKRHRCKIQ----------------------PASPNVCTRETA----VQNEEVGRWKSVKVGKTFCTSSVVKKKDGKKAIPFSEQQCLVLER
           +    Q +     Q                      P +PN  +            +VG WK+VK  K+       +K    ++     +QC     
Subjt:  TTYLDVPQQKRHRCKIQ----------------------PASPNVCTRETA----VQNEEVGRWKSVKVGKTFCTSSVVKKKDGKKAIPFSEQQCLVLER

Query:  EYRVIVDSDEE-IERSFSCLIEEKKTGEDVHFYSIEDAKEETDRILRNARRQKRKYCNPIIIN
           V++DSDEE I+  FSCLI E   G +  +    DA++ET+RILR ARR KRK+ NPIIIN
Subjt:  EYRVIVDSDEE-IERSFSCLIEEKKTGEDVHFYSIEDAKEETDRILRNARRQKRKYCNPIIIN

Q75RY2 Protein PAIR1

1.4e-24

34.15

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Query:  MRLKINKACDLSSISVLPPQ--SRRPNALTTGQQAPQLRSQP-------SQQSFSQASQHGM---YSQLSQNSLDEVL-------TNEQRFSSQDRENSI
        M+LK+NKACD++SISVLPP+       A  +G  A  + SQP       SQQSFSQ +   +    SQ SQ SLD+ L       T +QRF   D  +S 
Subjt:  MRLKINKACDLSSISVLPPQ--SRRPNALTTGQQAPQLRSQP-------SQQSFSQASQHGM---YSQLSQNSLDEVL-------TNEQRFSSQDRENSI

Query:  RKNSFFPPLNYS--REDCQLPLSRSSTSLTQRWKSTPPSDSKCQV-DEELDRRLGNIENSLNKFGKILDSLHGDILQLNKGMKQVSLDVEGIWQKMIVNS
        ++ S  P  + S  RE+ QL L++  ++   RW  +       QV +E+++R+  ++ +S++K G ++DS+  D++QLN+ MK+ SLD   I QK+ V  
Subjt:  RKNSFFPPLNYS--REDCQLPLSRSSTSLTQRWKSTPPSDSKCQV-DEELDRRLGNIENSLNKFGKILDSLHGDILQLNKGMKQVSLDVEGIWQKMIVNS

Query:  SSLQSMNKEHEEMKGTLEGGFKLISDQLK-KDAYQERLHEISDVLSVLEKQVQTSQLKLKDDLI----STFTQEMKAMACTLKNPMQ
        SSLQ + K  +++K       K   DQ    ++   +L+EIS  L+ L+ Q+Q  QL+     +    ++ + E+ +   TL+  MQ
Subjt:  SSLQSMNKEHEEMKGTLEGGFKLISDQLK-KDAYQERLHEISDVLSVLEKQVQTSQLKLKDDLI----STFTQEMKAMACTLKNPMQ

Arabidopsis top hits

e value

%identity

Alignment

AT1G01690.1 putative recombination initiation defects 3

8.7e-67

37.8

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Query:  MRLKINKACDLSSISVLPPQSRRPNALTTGQQAPQLRSQPSQQSFSQ---ASQHGM--YSQLSQNSLDEVLTNEQRFSSQDRENSIRK-NSFFPPLNYSR
        M++ INKACDL SISV PP  RR       Q + QLRSQ SQQSFSQ   +SQ G   +SQ++Q+S+DE+L N+QRFSSQ+R+ S++K +S  PP+N+ R
Subjt:  MRLKINKACDLSSISVLPPQSRRPNALTTGQQAPQLRSQPSQQSFSQ---ASQHGM--YSQLSQNSLDEVLTNEQRFSSQDRENSIRK-NSFFPPLNYSR

Query:  EDCQLPLSRSSTSLTQRWKSTPPSDSKCQVDEELDRRLGNIENSLNKFGKILDSLHGDILQLNKGMKQVSLDVEGIWQKMIVNSSSLQSMNKEHEEMKGT
        ED QL  SRSS+ L++RW S    +SK Q+ EEL++R G +E SL++FG +LDS+  DI+Q N+G K+V L+ E I QK+ +  +SLQ + KE  + K +
Subjt:  EDCQLPLSRSSTSLTQRWKSTPPSDSKCQVDEELDRRLGNIENSLNKFGKILDSLHGDILQLNKGMKQVSLDVEGIWQKMIVNSSSLQSMNKEHEEMKGT

Query:  LEGGFKLISDQLKKDAYQERLHEISDVLSVLEKQVQTSQLKLKDDLISTFTQEMKAMA-CTLKNPMQKFPYHP---------------------IQSPER
        L+GG K I ++  KD  QE+L +I  +L+ + +QV+T+  K++ ++  TFT+E++ +A      P  + P  P                     ++ PE 
Subjt:  LEGGFKLISDQLKKDAYQERLHEISDVLSVLEKQVQTSQLKLKDDLISTFTQEMKAMA-CTLKNPMQKFPYHP---------------------IQSPER

Query:  TTYLDVPQQKRHRCKIQ----------------------PASPNVCTRETA----VQNEEVGRWKSVKVGKTFCTSSVVKKKDGKKAIPFSEQQCLVLER
           +    Q +     Q                      P +PN  +            +VG WK+VK  K+       +K    ++     +QC     
Subjt:  TTYLDVPQQKRHRCKIQ----------------------PASPNVCTRETA----VQNEEVGRWKSVKVGKTFCTSSVVKKKDGKKAIPFSEQQCLVLER

Query:  EYRVIVDSDEE-IERSFSCLIEEKKTGEDVHFYSIEDAKEETDRILRNARRQKRKYCNPIIIN
           V++DSDEE I+  FSCLI E   G +  +    DA++ET+RILR ARR KRK+ NPIIIN
Subjt:  EYRVIVDSDEE-IERSFSCLIEEKKTGEDVHFYSIEDAKEETDRILRNARRQKRKYCNPIIIN

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGCGGCTGAAGATAAACAAGGCCTGCGATCTCAGCTCCATATCTGTTCTTCCTCCTCAATCCAGGAGGCCAAATGCGTTAACCACAGGGCAGCAAGCACCACAGTTGCG
GTCACAACCTTCGCAACAATCCTTTTCTCAGGCATCTCAGCACGGCATGTATTCTCAGCTCTCTCAAAACTCACTCGACGAAGTCTTGACAAATGAACAGCGATTTAGCT
CTCAAGACAGAGAAAACTCAATTCGGAAGAATTCCTTTTTCCCTCCTTTAAATTATTCCAGAGAAGATTGCCAATTGCCACTCTCTAGATCTTCAACCAGTTTAACACAA
AGATGGAAATCAACTCCTCCTTCGGACTCCAAGTGTCAAGTTGATGAAGAACTTGACCGCCGCCTTGGAAATATAGAAAACTCCTTAAACAAGTTTGGAAAGATCTTAGA
TTCTCTTCACGGTGATATTCTGCAACTAAACAAAGGAATGAAGCAAGTTTCTCTGGATGTGGAAGGTATATGGCAAAAGATGATTGTTAATAGTAGCTCGCTGCAATCCA
TGAACAAAGAGCACGAGGAAATGAAAGGTACCCTCGAAGGAGGCTTCAAATTGATATCTGATCAACTTAAGAAGGATGCATACCAAGAAAGGCTACATGAGATTTCTGAT
GTTCTCTCTGTATTGGAAAAGCAAGTACAAACATCTCAACTGAAACTAAAAGATGACTTAATCAGCACATTCACCCAAGAAATGAAGGCAATGGCCTGTACCTTGAAGAA
CCCCATGCAGAAGTTTCCGTATCATCCTATTCAATCTCCCGAGCGTACCACTTATTTGGATGTCCCACAGCAAAAGCGACATCGATGTAAAATCCAACCTGCGTCTCCAA
ATGTTTGCACTCGAGAAACTGCAGTACAAAACGAGGAAGTAGGAAGGTGGAAATCAGTTAAAGTGGGGAAGACTTTTTGCACTAGTAGTGTGGTGAAAAAGAAAGATGGG
AAGAAAGCAATTCCATTTTCTGAACAGCAGTGCCTGGTGCTGGAAAGAGAATACAGAGTTATTGTGGATTCCGATGAGGAGATCGAAAGAAGTTTCTCCTGCTTAATCGA
AGAGAAGAAAACAGGAGAAGATGTACATTTCTATTCCATAGAAGACGCCAAGGAAGAAACTGACAGAATTTTAAGGAATGCAAGAAGGCAGAAAAGAAAATACTGCAATC
CTATAATTATTAATTGA

mRNA sequence

Show/hide mRNA sequence

CAAGCTTGGAAATCATTCTCATCTTTCTACTGCTACTGCAAGGCGGAAGCTATAAACGATTGTTGGTGGCGATTCGCGATCGTTCTTCAAGCTCAACGACGCCTGCAATT
CCGATCGAACAGTCGAGGAGATCGGATTCTCTGTCTTCGCACGGAGAGCTTTTCATCTCAAATGCGGCTGAAGATAAACAAGGCCTGCGATCTCAGCTCCATATCTGTTC
TTCCTCCTCAATCCAGGAGGCCAAATGCGTTAACCACAGGGCAGCAAGCACCACAGTTGCGGTCACAACCTTCGCAACAATCCTTTTCTCAGGCATCTCAGCACGGCATG
TATTCTCAGCTCTCTCAAAACTCACTCGACGAAGTCTTGACAAATGAACAGCGATTTAGCTCTCAAGACAGAGAAAACTCAATTCGGAAGAATTCCTTTTTCCCTCCTTT
AAATTATTCCAGAGAAGATTGCCAATTGCCACTCTCTAGATCTTCAACCAGTTTAACACAAAGATGGAAATCAACTCCTCCTTCGGACTCCAAGTGTCAAGTTGATGAAG
AACTTGACCGCCGCCTTGGAAATATAGAAAACTCCTTAAACAAGTTTGGAAAGATCTTAGATTCTCTTCACGGTGATATTCTGCAACTAAACAAAGGAATGAAGCAAGTT
TCTCTGGATGTGGAAGGTATATGGCAAAAGATGATTGTTAATAGTAGCTCGCTGCAATCCATGAACAAAGAGCACGAGGAAATGAAAGGTACCCTCGAAGGAGGCTTCAA
ATTGATATCTGATCAACTTAAGAAGGATGCATACCAAGAAAGGCTACATGAGATTTCTGATGTTCTCTCTGTATTGGAAAAGCAAGTACAAACATCTCAACTGAAACTAA
AAGATGACTTAATCAGCACATTCACCCAAGAAATGAAGGCAATGGCCTGTACCTTGAAGAACCCCATGCAGAAGTTTCCGTATCATCCTATTCAATCTCCCGAGCGTACC
ACTTATTTGGATGTCCCACAGCAAAAGCGACATCGATGTAAAATCCAACCTGCGTCTCCAAATGTTTGCACTCGAGAAACTGCAGTACAAAACGAGGAAGTAGGAAGGTG
GAAATCAGTTAAAGTGGGGAAGACTTTTTGCACTAGTAGTGTGGTGAAAAAGAAAGATGGGAAGAAAGCAATTCCATTTTCTGAACAGCAGTGCCTGGTGCTGGAAAGAG
AATACAGAGTTATTGTGGATTCCGATGAGGAGATCGAAAGAAGTTTCTCCTGCTTAATCGAAGAGAAGAAAACAGGAGAAGATGTACATTTCTATTCCATAGAAGACGCC
AAGGAAGAAACTGACAGAATTTTAAGGAATGCAAGAAGGCAGAAAAGAAAATACTGCAATCCTATAATTATTAATTGAAGGTGCAAGATGTCTCAGCACAACCAGGATGA
GAAAAGTGCCTTTGGAATAGGTAATTGGAACCTTATCTTGCTGTTGAATGCCTACTTTTACATGCTGCCCATTATGATTATCTGAGCCTTATTGCTTTTCGTACATCCCT
TCTTTTTCTCTTCCACTGCTCAAATATCCTCCCCAAAATCTTCTTTCTTTTCCCTTCCTCCCACTTTGGAATCTGGACCACTAACACATTATTTCCACACACAAAATGGC
CACAATTATATCTTGCTCTCGACATAAAAACTTTTTTGTGATGGGGAAGGCTCTTTCGTGGGACATTAAAATAAGCTTGAGCCATTCATAATTTTTAGCTTTTCTTTGAA
ACGAAGCAAAGCTCTGTAGATGTCTGTTCACTCTTGGTAATTGTTCCTTTTTGTTGTGGGTTTGGAGATGGTGGGGTTTCAATTATGCAGCCCATTATATTCCCAATGGG
TGGCGTAACTAGTTGAATACTTGGACTTTGAAGGTATGTTTCCTTCAATATCCTAGATTCGAGATTCACTTCGTCACATTAATTTGTAATTACTTTTAGTGTCTTCATTC
GTTCGATGTTTCTCGGCATTTGACCTAGGGACATGCATGATTACTCTTGTTTAAAAAAAAATTTATGAAGTCCATTACCAACTTTTTTGGGCGGAAGGAAAGTCCATGCC
TGGTAGCAAGTGAGGTATCCACTTCTGAGTCGTTTAATTAAATTGAACAAAGCCCA

Protein sequence

Show/hide protein sequence

MRLKINKACDLSSISVLPPQSRRPNALTTGQQAPQLRSQPSQQSFSQASQHGMYSQLSQNSLDEVLTNEQRFSSQDRENSIRKNSFFPPLNYSREDCQLPLSRSSTSLTQ
RWKSTPPSDSKCQVDEELDRRLGNIENSLNKFGKILDSLHGDILQLNKGMKQVSLDVEGIWQKMIVNSSSLQSMNKEHEEMKGTLEGGFKLISDQLKKDAYQERLHEISD
VLSVLEKQVQTSQLKLKDDLISTFTQEMKAMACTLKNPMQKFPYHPIQSPERTTYLDVPQQKRHRCKIQPASPNVCTRETAVQNEEVGRWKSVKVGKTFCTSSVVKKKDG
KKAIPFSEQQCLVLEREYRVIVDSDEEIERSFSCLIEEKKTGEDVHFYSIEDAKEETDRILRNARRQKRKYCNPIIIN

Sed0027842 (gene) of Chayote v1 genome