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Sed0027846 (gene) of Chayote v1 genome

Gene IDSed0027846
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG01:11556296..11556627
RNA-Seq ExpressionSed0027846
SyntenySed0027846
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GFZ03822.1 hypothetical protein Acr_16g0004460 [Actinidia rufa]1.4e-0962.12Show/hide
Query:  MVSRVEETLRRKQQKVQPAATAAAAAKQIQCNIAKYPKFKRSSSNVEEDGASSAMLLLACIAFAPD
        MVS+VEE ++++QQ+ Q         KQ+QCN  K  KFKRSSSN+EEDGASSA+LLLACIAFAP+
Subjt:  MVSRVEETLRRKQQKVQPAATAAAAAKQIQCNIAKYPKFKRSSSNVEEDGASSAMLLLACIAFAPD

KAG2676094.1 hypothetical protein I3760_12G035800 [Carya illinoinensis]2.8e-1060.29Show/hide
Query:  MVSRVEETLRRKQQKVQPAATAAAAAKQIQCNIAKYPKFKRSSSNVEEDGASSAMLLLACIAFAPDFS
        MVS+VEE+++ KQQ+ Q  +      KQ+QCN  K  KFKRSSSN+EEDGASSA+LLLACIA AP ++
Subjt:  MVSRVEETLRRKQQKVQPAATAAAAAKQIQCNIAKYPKFKRSSSNVEEDGASSAMLLLACIAFAPDFS

KAG6584135.1 hypothetical protein SDJN03_20067, partial [Cucurbita argyrosperma subsp. sororia]1.0e-2084.72Show/hide
Query:  MVSRVEETLRRKQQKVQP--AATAAAAAKQIQCNIAKYPKFKRSSSNVEEDGASSAMLLLACIAFAPDFSPL
        MVS+VEETLR K Q+VQP  AA AAA AKQIQCN AKYPKFKRS SNVEEDGASSAMLLLACIAFAPDFSP+
Subjt:  MVSRVEETLRRKQQKVQP--AATAAAAAKQIQCNIAKYPKFKRSSSNVEEDGASSAMLLLACIAFAPDFSPL

KAG7012298.1 hypothetical protein SDJN02_25050, partial [Cucurbita argyrosperma subsp. argyrosperma]7.5e-1675Show/hide
Query:  MVSRVEETLRRKQQKVQ-PAATAAAAAKQIQCNIAKYPKFKRSSSNVEEDGASSAMLLLACIAFAPDFSPLA
        MVS+VEE LRRKQQ+VQ P A A AAAKQIQ N AKYPKFKRSSS+V +DGASSA+LLLACIAF+P  SP++
Subjt:  MVSRVEETLRRKQQKVQ-PAATAAAAAKQIQCNIAKYPKFKRSSSNVEEDGASSAMLLLACIAFAPDFSPLA

KGN64384.1 hypothetical protein Csa_013100 [Cucumis sativus]6.8e-1780Show/hide
Query:  MVSRVEETLRRKQQKVQP------AATAAAAAKQIQCNIAKYPKFKRSSSNVEEDGASSAMLLLACIAFA
        MVS+VEETLRRK Q+V P      A  AAA AKQIQCN AKYPKFKRSSSNVEEDGASSAMLLLACIAFA
Subjt:  MVSRVEETLRRKQQKVQP------AATAAAAAKQIQCNIAKYPKFKRSSSNVEEDGASSAMLLLACIAFA

TrEMBL top hitse value%identityAlignment
A0A0A0LTS0 Uncharacterized protein3.3e-1780Show/hide
Query:  MVSRVEETLRRKQQKVQP------AATAAAAAKQIQCNIAKYPKFKRSSSNVEEDGASSAMLLLACIAFA
        MVS+VEETLRRK Q+V P      A  AAA AKQIQCN AKYPKFKRSSSNVEEDGASSAMLLLACIAFA
Subjt:  MVSRVEETLRRKQQKVQP------AATAAAAAKQIQCNIAKYPKFKRSSSNVEEDGASSAMLLLACIAFA

A0A151TE32 Uncharacterized protein1.1e-0960.87Show/hide
Query:  MVSRVEETLRR-KQQKVQPAATAAAAAKQIQCNIAKYPKFKRSSSNVEEDGASSAMLLLACIAFAPDFS
        MVS+VEE ++R KQQ+ Q         KQIQCN  K  KFKRSSSN+EEDGASSA+L LACIA AP ++
Subjt:  MVSRVEETLRR-KQQKVQPAATAAAAAKQIQCNIAKYPKFKRSSSNVEEDGASSAMLLLACIAFAPDFS

A0A4D6KYW9 Uncharacterized protein1.5e-0960.87Show/hide
Query:  MVSRVEETLRRKQQKVQPAAT-AAAAAKQIQCNIAKYPKFKRSSSNVEEDGASSAMLLLACIAFAPDFS
        MVS+VEE ++RK+Q  Q          KQIQCN  K  KFKRSSSN+EEDGASSA+L LACIA AP F+
Subjt:  MVSRVEETLRRKQQKVQPAAT-AAAAAKQIQCNIAKYPKFKRSSSNVEEDGASSAMLLLACIAFAPDFS

A0A6P3ZNW3 uncharacterized protein LOC1074181771.1e-0961.54Show/hide
Query:  MVSRVEETLRRKQQKVQPAATAAAAAKQIQCNIAKYPKFKRSSSNVEEDGASSAMLLLACIAFAP
        MVS++EE +++KQQK Q         KQIQCN  K  KFKRSSSN+EEDG S+A+LLLACIA AP
Subjt:  MVSRVEETLRRKQQKVQPAATAAAAAKQIQCNIAKYPKFKRSSSNVEEDGASSAMLLLACIAFAP

A0A7J0FYN8 Uncharacterized protein6.6e-1062.12Show/hide
Query:  MVSRVEETLRRKQQKVQPAATAAAAAKQIQCNIAKYPKFKRSSSNVEEDGASSAMLLLACIAFAPD
        MVS+VEE ++++QQ+ Q         KQ+QCN  K  KFKRSSSN+EEDGASSA+LLLACIAFAP+
Subjt:  MVSRVEETLRRKQQKVQPAATAAAAAKQIQCNIAKYPKFKRSSSNVEEDGASSAMLLLACIAFAPD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G50335.1 unknown protein1.1e-0441.94Show/hide
Query:  MVSRVEETLRRKQQKVQPAATAAAAAKQIQCNIAKYPKFKRSSSNVEEDGASSAMLLLACIA
        ++ R +E  R +++K+Q             CN  K  +FKRS+SN++ DGASSA+ LLACIA
Subjt:  MVSRVEETLRRKQQKVQPAATAAAAAKQIQCNIAKYPKFKRSSSNVEEDGASSAMLLLACIA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGTCTAGAGTGGAAGAAACCCTGAGAAGGAAGCAGCAGAAAGTTCAGCCGGCGGCGACGGCGGCGGCGGCGGCGAAGCAAATCCAGTGCAATATAGCGAAGTATCC
GAAGTTCAAGAGAAGTAGCTCCAATGTTGAAGAAGATGGCGCCTCTTCCGCCATGCTTTTGCTTGCCTGCATTGCCTTTGCCCCCGATTTCAGCCCCCTCGCCGCCTGA
mRNA sequenceShow/hide mRNA sequence
CCTCAAGAGCTTTAGAAAAAAATGGTGTCTAGAGTGGAAGAAACCCTGAGAAGGAAGCAGCAGAAAGTTCAGCCGGCGGCGACGGCGGCGGCGGCGGCGAAGCAAATCCA
GTGCAATATAGCGAAGTATCCGAAGTTCAAGAGAAGTAGCTCCAATGTTGAAGAAGATGGCGCCTCTTCCGCCATGCTTTTGCTTGCCTGCATTGCCTTTGCCCCCGATT
TCAGCCCCCTCGCCGCCTGAACACGGCGGCGCCGCCTCCTTCGAGGATATATTAGCTGTTTTCTCTCTCTCCGCCGGTCGTCGGAGGCAACTTCCGGTAGCCTAATTCTG
AG
Protein sequenceShow/hide protein sequence
MVSRVEETLRRKQQKVQPAATAAAAAKQIQCNIAKYPKFKRSSSNVEEDGASSAMLLLACIAFAPDFSPLAA