; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0027850 (gene) of Chayote v1 genome

Gene IDSed0027850
OrganismSechium edule (Chayote v1)
Descriptionribosomal RNA small subunit methyltransferase NEP1
Genome locationLG06:10652167..10654902
RNA-Seq ExpressionSed0027850
SyntenySed0027850
Gene Ontology termsGO:0070475 - rRNA base methylation (biological process)
GO:0005730 - nucleolus (cellular component)
GO:0032040 - small-subunit processome (cellular component)
GO:0019843 - rRNA binding (molecular function)
GO:0070037 - rRNA (pseudouridine) methyltransferase activity (molecular function)
InterPro domainsIPR005304 - Ribosomal biogenesis, methyltransferase, EMG1/NEP1
IPR029026 - tRNA (guanine-N1-)-methyltransferase, N-terminal
IPR029028 - Alpha/beta knot methyltransferases


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7017643.1 Ribosomal RNA small subunit methyltransferase NEP1, partial [Cucurbita argyrosperma subsp. argyrosperma]1.2e-11178.49Show/hide
Query:  MGRPFDAKGKKRKNREVYDR-----ESTAPEKKSLGAEEPDEEEPLNGAAKEDFHELGSIPIVPSDPKS---AGVIFVLERASLEVAKVKGNYELLNSDD
        M RPF AKGKKRK  E YDR     ESTA  KK++   EPD E+P N AA+E+FHEL  IPIVP DPKS   AGVIFVLERASLEVAKV  NY+LLNSDD
Subjt:  MGRPFDAKGKKRKNREVYDR-----ESTAPEKKSLGAEEPDEEEPLNGAAKEDFHELGSIPIVPSDPKS---AGVIFVLERASLEVAKVKGNYELLNSDD

Query:  HSKIIRRYNRNPGDYRPDICHQALLNIFDSRIAKAGRLKAVYVKTEKGLLIEIKPYVRLPRTQKRFYGLMLELLQKLSITAVGQRDKLLRLIKNPVTQYL
        HS  +RR NRNPGDYRPDI HQALL IFDSRIAKAGRLK VYVKTEKGLLIEIKPYVRLPRTQKRFYG+ML+LLQKLSITA G+R+KL R+IKNPVTQYL
Subjt:  HSKIIRRYNRNPGDYRPDICHQALLNIFDSRIAKAGRLKAVYVKTEKGLLIEIKPYVRLPRTQKRFYGLMLELLQKLSITAVGQRDKLLRLIKNPVTQYL

Query:  PANSRKMGFSHSSNKLVKMQNYLDAVKDDVDLVFVVGAMAHGKIDIDYADDLLSISNYPLSAGCCIADICKVLADKWNV
        P+NSRKMGFSHSS+KLVK++ YLDAV+DDVDLVFVVGAMAHGKI+  Y DDLL+IS YPLSA CCIADICK LADKWNV
Subjt:  PANSRKMGFSHSSNKLVKMQNYLDAVKDDVDLVFVVGAMAHGKIDIDYADDLLSISNYPLSAGCCIADICKVLADKWNV

XP_004136640.2 ribosomal RNA small subunit methyltransferase nep-1 [Cucumis sativus]1.2e-11178.14Show/hide
Query:  MGRPFDAKGKKRKNREVYDR-----ESTAPEKKSLGAEEPDEEEPLNGAAKEDFHELGSIPIVPSDPK---SAGVIFVLERASLEVAKVKGNYELLNSDD
        M RPF AKGKKRK  E YDR     EST+P KK +   EPDEE      AKEDFHEL  IPI P DPK   +AGVIF+LERASLEVAKV  NY+LLNSDD
Subjt:  MGRPFDAKGKKRKNREVYDR-----ESTAPEKKSLGAEEPDEEEPLNGAAKEDFHELGSIPIVPSDPK---SAGVIFVLERASLEVAKVKGNYELLNSDD

Query:  HSKIIRRYNRNPGDYRPDICHQALLNIFDSRIAKAGRLKAVYVKTEKGLLIEIKPYVRLPRTQKRFYGLMLELLQKLSITAVGQRDKLLRLIKNPVTQYL
        HS  +RR NRNPGDYRPDI HQALL IFDSRIAKAGRLK VYVKTEKGLLIEIKPYVRLPRTQKRFYG+ML+LLQKLSITA G+R+KL R+IKNPVTQYL
Subjt:  HSKIIRRYNRNPGDYRPDICHQALLNIFDSRIAKAGRLKAVYVKTEKGLLIEIKPYVRLPRTQKRFYGLMLELLQKLSITAVGQRDKLLRLIKNPVTQYL

Query:  PANSRKMGFSHSSNKLVKMQNYLDAVKDDVDLVFVVGAMAHGKIDIDYADDLLSISNYPLSAGCCIADICKVLADKWNV
        PAN RKMGFSHSS+KLVK++NYLDAVKDDVDLVFVVGAMAHGKI+ DY DDLL+IS YPLSA CCIADICK LA+KWNV
Subjt:  PANSRKMGFSHSSNKLVKMQNYLDAVKDDVDLVFVVGAMAHGKIDIDYADDLLSISNYPLSAGCCIADICKVLADKWNV

XP_008443268.1 PREDICTED: ribosomal RNA small subunit methyltransferase NEP1 [Cucumis melo]3.3e-11278.49Show/hide
Query:  MGRPFDAKGKKRKNREVYDR-----ESTAPEKKSLGAEEPDEEEPLNGAAKEDFHELGSIPIVPSDPK---SAGVIFVLERASLEVAKVKGNYELLNSDD
        M RPF AKGKKRK  E YDR     ES++P KK +   EPDEE P     KEDFHEL  IPIVP DPK   +AGVIF+LERASLEVAKV  NY+LLNSDD
Subjt:  MGRPFDAKGKKRKNREVYDR-----ESTAPEKKSLGAEEPDEEEPLNGAAKEDFHELGSIPIVPSDPK---SAGVIFVLERASLEVAKVKGNYELLNSDD

Query:  HSKIIRRYNRNPGDYRPDICHQALLNIFDSRIAKAGRLKAVYVKTEKGLLIEIKPYVRLPRTQKRFYGLMLELLQKLSITAVGQRDKLLRLIKNPVTQYL
        HS  +RR NRNPGDYRPDI HQALL IFDSRIAKAGRLK VYVKTEKGLLIEIKPYVRLPRTQKRFYG+ML+LLQKLSITA G+R+KL R+IKNPVTQYL
Subjt:  HSKIIRRYNRNPGDYRPDICHQALLNIFDSRIAKAGRLKAVYVKTEKGLLIEIKPYVRLPRTQKRFYGLMLELLQKLSITAVGQRDKLLRLIKNPVTQYL

Query:  PANSRKMGFSHSSNKLVKMQNYLDAVKDDVDLVFVVGAMAHGKIDIDYADDLLSISNYPLSAGCCIADICKVLADKWNV
        PAN RKMGFSHSS+KLVKM+NYLDAVKDDVDLVFVVGAMAHGKI+ DY DDLL+IS YPLSA CCIADICK LA+KWNV
Subjt:  PANSRKMGFSHSSNKLVKMQNYLDAVKDDVDLVFVVGAMAHGKIDIDYADDLLSISNYPLSAGCCIADICKVLADKWNV

XP_022935622.1 ribosomal RNA small subunit methyltransferase nep-1 [Cucurbita moschata]1.2e-11178.49Show/hide
Query:  MGRPFDAKGKKRKNREVYDR-----ESTAPEKKSLGAEEPDEEEPLNGAAKEDFHELGSIPIVPSDPKS---AGVIFVLERASLEVAKVKGNYELLNSDD
        M RPF AKGKKRK  E YDR     ESTA  KK++   EPD E+P N AA+E+FHEL  IPIVP DPKS   AGVIFVLERASLEVAKV  NY+LLNSDD
Subjt:  MGRPFDAKGKKRKNREVYDR-----ESTAPEKKSLGAEEPDEEEPLNGAAKEDFHELGSIPIVPSDPKS---AGVIFVLERASLEVAKVKGNYELLNSDD

Query:  HSKIIRRYNRNPGDYRPDICHQALLNIFDSRIAKAGRLKAVYVKTEKGLLIEIKPYVRLPRTQKRFYGLMLELLQKLSITAVGQRDKLLRLIKNPVTQYL
        HS  +RR NRNPGDYRPDI HQALL IFDSRIAKAGRLK VYVKTEKGLLIEIKPYVRLPRTQKRFYG+ML+LLQKLSITA G+R+KL R+IKNPVTQYL
Subjt:  HSKIIRRYNRNPGDYRPDICHQALLNIFDSRIAKAGRLKAVYVKTEKGLLIEIKPYVRLPRTQKRFYGLMLELLQKLSITAVGQRDKLLRLIKNPVTQYL

Query:  PANSRKMGFSHSSNKLVKMQNYLDAVKDDVDLVFVVGAMAHGKIDIDYADDLLSISNYPLSAGCCIADICKVLADKWNV
        P+NSRKMGFSHSS+KLVK++ YLDAV+DDVDLVFVVGAMAHGKI+  Y DDLL+IS YPLSA CCIADICK LADKWNV
Subjt:  PANSRKMGFSHSSNKLVKMQNYLDAVKDDVDLVFVVGAMAHGKIDIDYADDLLSISNYPLSAGCCIADICKVLADKWNV

XP_038905075.1 ribosomal RNA small subunit methyltransferase nep-1 [Benincasa hispida]1.1e-11278.49Show/hide
Query:  MGRPFDAKGKKRKNREVYDR-----ESTAPEKKSLGAEEPDEEEPLNGAAKEDFHELGSIPIVPSDP---KSAGVIFVLERASLEVAKVKGNYELLNSDD
        M RPF AKGKKRK  E YDR     EST P KK     EPDEE P     KEDFHEL  IPIVP DP   K AGVIFVLERASLEVAKV  NY+LLNSDD
Subjt:  MGRPFDAKGKKRKNREVYDR-----ESTAPEKKSLGAEEPDEEEPLNGAAKEDFHELGSIPIVPSDP---KSAGVIFVLERASLEVAKVKGNYELLNSDD

Query:  HSKIIRRYNRNPGDYRPDICHQALLNIFDSRIAKAGRLKAVYVKTEKGLLIEIKPYVRLPRTQKRFYGLMLELLQKLSITAVGQRDKLLRLIKNPVTQYL
        HS  +R+ NRNPGDYRPDI HQALL IFDSRIAKAGRLKAVYVKTEKGLLIE+KPYVRLPRTQKRFYG+ML+LLQKLSITA G+R+KL R+IKNPVTQYL
Subjt:  HSKIIRRYNRNPGDYRPDICHQALLNIFDSRIAKAGRLKAVYVKTEKGLLIEIKPYVRLPRTQKRFYGLMLELLQKLSITAVGQRDKLLRLIKNPVTQYL

Query:  PANSRKMGFSHSSNKLVKMQNYLDAVKDDVDLVFVVGAMAHGKIDIDYADDLLSISNYPLSAGCCIADICKVLADKWNV
        PANSRKMGFSHSS+KLVKM+NYLDAV+DDVDLVFVVGAMAHGKI+ DY DDLL+IS YPLSA CCIADICK LA+KWN+
Subjt:  PANSRKMGFSHSSNKLVKMQNYLDAVKDDVDLVFVVGAMAHGKIDIDYADDLLSISNYPLSAGCCIADICKVLADKWNV

TrEMBL top hitse value%identityAlignment
A0A0A0LFI3 Uncharacterized protein6.0e-11278.14Show/hide
Query:  MGRPFDAKGKKRKNREVYDR-----ESTAPEKKSLGAEEPDEEEPLNGAAKEDFHELGSIPIVPSDPK---SAGVIFVLERASLEVAKVKGNYELLNSDD
        M RPF AKGKKRK  E YDR     EST+P KK +   EPDEE      AKEDFHEL  IPI P DPK   +AGVIF+LERASLEVAKV  NY+LLNSDD
Subjt:  MGRPFDAKGKKRKNREVYDR-----ESTAPEKKSLGAEEPDEEEPLNGAAKEDFHELGSIPIVPSDPK---SAGVIFVLERASLEVAKVKGNYELLNSDD

Query:  HSKIIRRYNRNPGDYRPDICHQALLNIFDSRIAKAGRLKAVYVKTEKGLLIEIKPYVRLPRTQKRFYGLMLELLQKLSITAVGQRDKLLRLIKNPVTQYL
        HS  +RR NRNPGDYRPDI HQALL IFDSRIAKAGRLK VYVKTEKGLLIEIKPYVRLPRTQKRFYG+ML+LLQKLSITA G+R+KL R+IKNPVTQYL
Subjt:  HSKIIRRYNRNPGDYRPDICHQALLNIFDSRIAKAGRLKAVYVKTEKGLLIEIKPYVRLPRTQKRFYGLMLELLQKLSITAVGQRDKLLRLIKNPVTQYL

Query:  PANSRKMGFSHSSNKLVKMQNYLDAVKDDVDLVFVVGAMAHGKIDIDYADDLLSISNYPLSAGCCIADICKVLADKWNV
        PAN RKMGFSHSS+KLVK++NYLDAVKDDVDLVFVVGAMAHGKI+ DY DDLL+IS YPLSA CCIADICK LA+KWNV
Subjt:  PANSRKMGFSHSSNKLVKMQNYLDAVKDDVDLVFVVGAMAHGKIDIDYADDLLSISNYPLSAGCCIADICKVLADKWNV

A0A1S3B7L0 ribosomal RNA small subunit methyltransferase NEP11.6e-11278.49Show/hide
Query:  MGRPFDAKGKKRKNREVYDR-----ESTAPEKKSLGAEEPDEEEPLNGAAKEDFHELGSIPIVPSDPK---SAGVIFVLERASLEVAKVKGNYELLNSDD
        M RPF AKGKKRK  E YDR     ES++P KK +   EPDEE P     KEDFHEL  IPIVP DPK   +AGVIF+LERASLEVAKV  NY+LLNSDD
Subjt:  MGRPFDAKGKKRKNREVYDR-----ESTAPEKKSLGAEEPDEEEPLNGAAKEDFHELGSIPIVPSDPK---SAGVIFVLERASLEVAKVKGNYELLNSDD

Query:  HSKIIRRYNRNPGDYRPDICHQALLNIFDSRIAKAGRLKAVYVKTEKGLLIEIKPYVRLPRTQKRFYGLMLELLQKLSITAVGQRDKLLRLIKNPVTQYL
        HS  +RR NRNPGDYRPDI HQALL IFDSRIAKAGRLK VYVKTEKGLLIEIKPYVRLPRTQKRFYG+ML+LLQKLSITA G+R+KL R+IKNPVTQYL
Subjt:  HSKIIRRYNRNPGDYRPDICHQALLNIFDSRIAKAGRLKAVYVKTEKGLLIEIKPYVRLPRTQKRFYGLMLELLQKLSITAVGQRDKLLRLIKNPVTQYL

Query:  PANSRKMGFSHSSNKLVKMQNYLDAVKDDVDLVFVVGAMAHGKIDIDYADDLLSISNYPLSAGCCIADICKVLADKWNV
        PAN RKMGFSHSS+KLVKM+NYLDAVKDDVDLVFVVGAMAHGKI+ DY DDLL+IS YPLSA CCIADICK LA+KWNV
Subjt:  PANSRKMGFSHSSNKLVKMQNYLDAVKDDVDLVFVVGAMAHGKIDIDYADDLLSISNYPLSAGCCIADICKVLADKWNV

A0A5D3DPQ6 Ribosomal RNA small subunit methyltransferase NEP11.6e-11278.49Show/hide
Query:  MGRPFDAKGKKRKNREVYDR-----ESTAPEKKSLGAEEPDEEEPLNGAAKEDFHELGSIPIVPSDPK---SAGVIFVLERASLEVAKVKGNYELLNSDD
        M RPF AKGKKRK  E YDR     ES++P KK +   EPDEE P     KEDFHEL  IPIVP DPK   +AGVIF+LERASLEVAKV  NY+LLNSDD
Subjt:  MGRPFDAKGKKRKNREVYDR-----ESTAPEKKSLGAEEPDEEEPLNGAAKEDFHELGSIPIVPSDPK---SAGVIFVLERASLEVAKVKGNYELLNSDD

Query:  HSKIIRRYNRNPGDYRPDICHQALLNIFDSRIAKAGRLKAVYVKTEKGLLIEIKPYVRLPRTQKRFYGLMLELLQKLSITAVGQRDKLLRLIKNPVTQYL
        HS  +RR NRNPGDYRPDI HQALL IFDSRIAKAGRLK VYVKTEKGLLIEIKPYVRLPRTQKRFYG+ML+LLQKLSITA G+R+KL R+IKNPVTQYL
Subjt:  HSKIIRRYNRNPGDYRPDICHQALLNIFDSRIAKAGRLKAVYVKTEKGLLIEIKPYVRLPRTQKRFYGLMLELLQKLSITAVGQRDKLLRLIKNPVTQYL

Query:  PANSRKMGFSHSSNKLVKMQNYLDAVKDDVDLVFVVGAMAHGKIDIDYADDLLSISNYPLSAGCCIADICKVLADKWNV
        PAN RKMGFSHSS+KLVKM+NYLDAVKDDVDLVFVVGAMAHGKI+ DY DDLL+IS YPLSA CCIADICK LA+KWNV
Subjt:  PANSRKMGFSHSSNKLVKMQNYLDAVKDDVDLVFVVGAMAHGKIDIDYADDLLSISNYPLSAGCCIADICKVLADKWNV

A0A6J1F634 ribosomal RNA small subunit methyltransferase nep-16.0e-11278.49Show/hide
Query:  MGRPFDAKGKKRKNREVYDR-----ESTAPEKKSLGAEEPDEEEPLNGAAKEDFHELGSIPIVPSDPKS---AGVIFVLERASLEVAKVKGNYELLNSDD
        M RPF AKGKKRK  E YDR     ESTA  KK++   EPD E+P N AA+E+FHEL  IPIVP DPKS   AGVIFVLERASLEVAKV  NY+LLNSDD
Subjt:  MGRPFDAKGKKRKNREVYDR-----ESTAPEKKSLGAEEPDEEEPLNGAAKEDFHELGSIPIVPSDPKS---AGVIFVLERASLEVAKVKGNYELLNSDD

Query:  HSKIIRRYNRNPGDYRPDICHQALLNIFDSRIAKAGRLKAVYVKTEKGLLIEIKPYVRLPRTQKRFYGLMLELLQKLSITAVGQRDKLLRLIKNPVTQYL
        HS  +RR NRNPGDYRPDI HQALL IFDSRIAKAGRLK VYVKTEKGLLIEIKPYVRLPRTQKRFYG+ML+LLQKLSITA G+R+KL R+IKNPVTQYL
Subjt:  HSKIIRRYNRNPGDYRPDICHQALLNIFDSRIAKAGRLKAVYVKTEKGLLIEIKPYVRLPRTQKRFYGLMLELLQKLSITAVGQRDKLLRLIKNPVTQYL

Query:  PANSRKMGFSHSSNKLVKMQNYLDAVKDDVDLVFVVGAMAHGKIDIDYADDLLSISNYPLSAGCCIADICKVLADKWNV
        P+NSRKMGFSHSS+KLVK++ YLDAV+DDVDLVFVVGAMAHGKI+  Y DDLL+IS YPLSA CCIADICK LADKWNV
Subjt:  PANSRKMGFSHSSNKLVKMQNYLDAVKDDVDLVFVVGAMAHGKIDIDYADDLLSISNYPLSAGCCIADICKVLADKWNV

A0A6J1J0G6 ribosomal RNA small subunit methyltransferase nep-13.0e-11178.14Show/hide
Query:  MGRPFDAKGKKRKNREVYDR-----ESTAPEKKSLGAEEPDEEEPLNGAAKEDFHELGSIPIVPSDPKS---AGVIFVLERASLEVAKVKGNYELLNSDD
        M RPF AKGKKRK  E YDR     ES A  KK++   EPD E+P N AA+E+FHEL  IPIVP DPKS   AGVIFVLERASLEVAKV  NY+LLNSDD
Subjt:  MGRPFDAKGKKRKNREVYDR-----ESTAPEKKSLGAEEPDEEEPLNGAAKEDFHELGSIPIVPSDPKS---AGVIFVLERASLEVAKVKGNYELLNSDD

Query:  HSKIIRRYNRNPGDYRPDICHQALLNIFDSRIAKAGRLKAVYVKTEKGLLIEIKPYVRLPRTQKRFYGLMLELLQKLSITAVGQRDKLLRLIKNPVTQYL
        HS  +RR NRNPGDYRPDI HQALL IFDSRIAKAGRLK VYVKTEKGLLIEIKPYVRLPRTQKRFYG+ML+LLQKLSITA G+R+KL R+IKNPVTQYL
Subjt:  HSKIIRRYNRNPGDYRPDICHQALLNIFDSRIAKAGRLKAVYVKTEKGLLIEIKPYVRLPRTQKRFYGLMLELLQKLSITAVGQRDKLLRLIKNPVTQYL

Query:  PANSRKMGFSHSSNKLVKMQNYLDAVKDDVDLVFVVGAMAHGKIDIDYADDLLSISNYPLSAGCCIADICKVLADKWNV
        P+NSRKMGFSHSS+KLVK++ YLDAV+DDVDLVFVVGAMAHGKI+  Y DDLL+IS YPLSA CCIADICK LADKWNV
Subjt:  PANSRKMGFSHSSNKLVKMQNYLDAVKDDVDLVFVVGAMAHGKIDIDYADDLLSISNYPLSAGCCIADICKVLADKWNV

SwissProt top hitse value%identityAlignment
O35130 Ribosomal RNA small subunit methyltransferase NEP15.7e-4345.37Show/hide
Query:  VIFVLERASLEVAKVKGNYELLNSDDHSKIIRRYNRNPGDYRPDICHQALLNIFDSRIAKAGRLKAVYVKTEKGLLIEIKPYVRLPRTQKRFYGLMLELL
        +I VLE ASLE  KV   YELLN D H  ++ +  R+PG+ RPDI HQ+LL + DS + +AG L+ VY+ T+K +LIE+ P  R+PRT  RF GLM++LL
Subjt:  VIFVLERASLEVAKVKGNYELLNSDDHSKIIRRYNRNPGDYRPDICHQALLNIFDSRIAKAGRLKAVYVKTEKGLLIEIKPYVRLPRTQKRFYGLMLELL

Query:  QKLSITAVGQRDKLLRLIKNPVTQYLPANSRKMGFSHSSNKLVKMQNYLDAVKDDVDLVFVVGAMAHGKIDIDYADDLLSISNYPLSAGCCIADICKVLA
         KLS+ A     KLL++IKNPV+ + P    K+G S S   +  ++   + V     +VFVVGA AHGK+ ++Y + ++SISNYPLSA    A +     
Subjt:  QKLSITAVGQRDKLLRLIKNPVTQYLPANSRKMGFSHSSNKLVKMQNYLDAVKDDVDLVFVVGAMAHGKIDIDYADDLLSISNYPLSAGCCIADICKVLA

Query:  DKWNV
        + W V
Subjt:  DKWNV

Q06287 Ribosomal RNA small subunit methyltransferase NEP18.0e-4543.56Show/hide
Query:  PIVPSDPK-SAGVIFVLERASLEVAKVKGN------YELLNSDDHSKIIRRYNRNPGDYRPDICHQALLNIFDSRIAKAGRLKAVYVKTEKGLLIEIKPY
        P++ S  K +  +I VL  ASLE  K+  N      Y LLN DDH  ++++  R+  + RPDI HQ LL + DS I KAG+L+ VY++T +G+LIE+ P 
Subjt:  PIVPSDPK-SAGVIFVLERASLEVAKVKGN------YELLNSDDHSKIIRRYNRNPGDYRPDICHQALLNIFDSRIAKAGRLKAVYVKTEKGLLIEIKPY

Query:  VRLPRTQKRFYGLMLELLQKLSITAVGQRDKLLRLIKNPVTQYLPANSRKMGFSHSSNKLVKMQNYLDAVKDDVDLVFVVGAMAHGKIDI--DYADDLLS
        VR+PRT KRF GLM++LL KLSI +V   +KLL++IKNP+T +LP   RK+  S  +  ++++Q+Y++ + DD  +   VGAMA GK +   +Y D+ + 
Subjt:  VRLPRTQKRFYGLMLELLQKLSITAVGQRDKLLRLIKNPVTQYLPANSRKMGFSHSSNKLVKMQNYLDAVKDDVDLVFVVGAMAHGKIDI--DYADDLLS

Query:  ISNYPLSAGCCIADICKVLADKWNV
        +SNYPLSA    +  C    D WN+
Subjt:  ISNYPLSAGCCIADICKVLADKWNV

Q92979 Ribosomal RNA small subunit methyltransferase NEP12.6e-4345.85Show/hide
Query:  VIFVLERASLEVAKVKGNYELLNSDDHSKIIRRYNRNPGDYRPDICHQALLNIFDSRIAKAGRLKAVYVKTEKGLLIEIKPYVRLPRTQKRFYGLMLELL
        +I VLE ASLE  KV   YELLN D H  I+ +  R+PG+ RPDI HQ+LL + DS + +AG L+ VY+ T+K +LIE+ P  R+PRT  RF GLM++LL
Subjt:  VIFVLERASLEVAKVKGNYELLNSDDHSKIIRRYNRNPGDYRPDICHQALLNIFDSRIAKAGRLKAVYVKTEKGLLIEIKPYVRLPRTQKRFYGLMLELL

Query:  QKLSITAVGQRDKLLRLIKNPVTQYLPANSRKMGFSHSSNKLVKMQNYLDAVKDDVDLVFVVGAMAHGKIDIDYADDLLSISNYPLSAGCCIADICKVLA
         KLS+ A     KLL++IKNPV+ + P    K+G S S   +  + +  + V     +VFVVGA AHGK+ ++Y + ++SISNYPLSA    A +     
Subjt:  QKLSITAVGQRDKLLRLIKNPVTQYLPANSRKMGFSHSSNKLVKMQNYLDAVKDDVDLVFVVGAMAHGKIDIDYADDLLSISNYPLSAGCCIADICKVLA

Query:  DKWNV
        + W V
Subjt:  DKWNV

Q9W4J5 Ribosomal RNA small subunit methyltransferase NEP14.4e-4344.76Show/hide
Query:  VIFVLERASLEVAKVKGNYELLNSDDHSKIIRRYNRNPGDYRPDICHQALLNIFDSRIAKAGRLKAVYVKTEKGLLIEIKPYVRLPRTQKRFYGLMLELL
        +I VLE A LE  KV   +ELLN DDH+ I+R+  R+PG  RPDI HQ LL +FDS + +AG L+ V+V+TE  +LIEI P  R+PRT KRF GLM++LL
Subjt:  VIFVLERASLEVAKVKGNYELLNSDDHSKIIRRYNRNPGDYRPDICHQALLNIFDSRIAKAGRLKAVYVKTEKGLLIEIKPYVRLPRTQKRFYGLMLELL

Query:  QKLSITAVGQRDKLLRLIKNPVTQYLPANSRKMGFSHSSNKLVKMQNYL-----DAVKDDVDLVFVVGAMAHGKIDIDYADDLLSISNYPLSAGCCIADI
         K  I A     +L+ +IKNP+T ++P   +K   S S   L   ++ +      +   D  +V V+GA AHG +  DY ++L SISNYPLSA    + I
Subjt:  QKLSITAVGQRDKLLRLIKNPVTQYLPANSRKMGFSHSSNKLVKMQNYL-----DAVKDDVDLVFVVGAMAHGKIDIDYADDLLSISNYPLSAGCCIADI

Query:  CKVLADKWNV
        C    + W V
Subjt:  CKVLADKWNV

Q9XX15 Ribosomal RNA small subunit methyltransferase nep-13.9e-4446.53Show/hide
Query:  VLERASLEVAKVKGNYELLNSDDHSKIIRRYNRNPGDYRPDICHQALLNIFDSRIAKAGRLKAVYVKTEKGLLIEIKPYVRLPRTQKRFYGLMLELLQKL
        VLE  SLE AKV G Y +L+SD H+  +R+  ++P DYRPDI HQ LLN+ DS + +AG+L+ V+ +T K +L+++ P  R+PRT  RF GLM++LL KL
Subjt:  VLERASLEVAKVKGNYELLNSDDHSKIIRRYNRNPGDYRPDICHQALLNIFDSRIAKAGRLKAVYVKTEKGLLIEIKPYVRLPRTQKRFYGLMLELLQKL

Query:  SITAVGQRDKLLRLIKNPVTQYLPANSRKMGFSHSSNKLVKMQNYLDAVKDDVDLVFVVGAMAHGKIDIDYADDLLSISNYPLSAGCCIADICKVLADKW
        SI A     KL+ ++KNPV+ +LP  SRKM  S +  +L  M N L A + D  LV ++G +A GKI +DY D    ISNYPLSA    A +   L + W
Subjt:  SITAVGQRDKLLRLIKNPVTQYLPANSRKMGFSHSSNKLVKMQNYLDAVKDDVDLVFVVGAMAHGKIDIDYADDLLSISNYPLSAGCCIADICKVLADKW

Query:  NV
         +
Subjt:  NV

Arabidopsis top hitse value%identityAlignment
AT3G57000.1 nucleolar essential protein-related5.6e-7854.85Show/hide
Query:  MGRPFDAKGKKRKNREV-YDRE--------------------STAPEKKSLGAEEPDEEEPLN---GAAKEDFHELGSIPIVPSDP--KSAGVIFVLERA
        M RP+  K  KRK RE  YD+E                      A ++ +  AEE ++EE +     AA ED   +G IPIV + P  + +G++FVLE+A
Subjt:  MGRPFDAKGKKRKNREV-YDRE--------------------STAPEKKSLGAEEPDEEEPLN---GAAKEDFHELGSIPIVPSDP--KSAGVIFVLERA

Query:  SLEVAKVKGNYELLNSDDHSKIIRRYNRNPGDYRPDICHQALLNIFDSRIAKAGRLKAVYVKTEKGLLIEIKPYVRLPRTQKRFYGLMLELLQKLSITAV
        SLEVAKV   Y+LLNSDDH+  +++ NRNP DYRPDI HQALL I DS + KAGRLKAVYV+TEKG+L E+KP+VR+PRT KRF G+ML+LLQKLSITAV
Subjt:  SLEVAKVKGNYELLNSDDHSKIIRRYNRNPGDYRPDICHQALLNIFDSRIAKAGRLKAVYVKTEKGLLIEIKPYVRLPRTQKRFYGLMLELLQKLSITAV

Query:  GQRDKLLRLIKNPVTQ-YLPANSRKMGFSHSSNKLVKMQNYLDAV-KDDVDLVFVVGAMAHGKIDIDYADDLLSISNYPLSAGCCIADICKVLADKWNV
          R+KLLR +KNP+ + +LP NS ++GFSHSS KLV MQ +L  V  DD D VFVVGAMAHGKID +Y D+ +S+S YPLSA  CI+ IC+ LA  WN+
Subjt:  GQRDKLLRLIKNPVTQ-YLPANSRKMGFSHSSNKLVKMQNYLDAV-KDDVDLVFVVGAMAHGKIDIDYADDLLSISNYPLSAGCCIADICKVLADKWNV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTCGACCTTTTGATGCGAAGGGGAAGAAGAGAAAGAATAGGGAGGTATACGACAGAGAATCGACCGCACCGGAGAAGAAGTCTTTGGGGGCGGAGGAGCCTGATGA
AGAAGAACCACTGAATGGAGCAGCAAAAGAAGACTTCCACGAGCTTGGAAGTATTCCAATTGTTCCAAGTGACCCCAAAAGTGCTGGTGTCATCTTCGTTCTCGAGAGAG
CTTCTCTGGAGGTCGCCAAAGTTAAGGGGAATTATGAGCTGTTAAATTCCGATGACCATTCCAAAATTATTCGGAGATACAACAGAAATCCTGGAGATTACAGACCAGAT
ATCTGCCATCAAGCTCTGTTGAATATTTTCGATAGCCGCATTGCAAAGGCTGGGAGGTTGAAAGCCGTTTATGTGAAAACTGAGAAAGGCTTATTGATTGAAATTAAACC
ATATGTTCGTCTGCCAAGGACGCAAAAGCGCTTTTATGGACTTATGTTGGAATTGCTACAAAAGTTAAGCATCACAGCTGTTGGCCAGCGTGATAAACTTTTACGCCTGA
TCAAAAATCCTGTAACTCAATATTTACCTGCCAATTCTCGTAAGATGGGCTTCTCACACAGTTCAAACAAGTTGGTCAAGATGCAGAATTATCTGGATGCGGTCAAAGAT
GATGTAGACCTTGTTTTTGTGGTAGGTGCTATGGCTCATGGGAAAATTGATATTGATTACGCAGATGATCTTTTATCCATTTCTAATTATCCTCTCAGTGCTGGTTGCTG
TATTGCTGACATTTGCAAAGTTTTGGCCGACAAATGGAATGTATGGTGA
mRNA sequenceShow/hide mRNA sequence
CAGCCCATAACCCAAGCGCTGTGGTGGTTGCCGCTAGGTTTCAACGATAGTGTATATATCCAATTCAATTTCTAGGGTTTATGCTTGCCGCGATCTTTCGACGACAATCC
AGAAGCATTAGCTTCACTCCTGTTCACAATGGGTCGACCTTTTGATGCGAAGGGGAAGAAGAGAAAGAATAGGGAGGTATACGACAGAGAATCGACCGCACCGGAGAAGA
AGTCTTTGGGGGCGGAGGAGCCTGATGAAGAAGAACCACTGAATGGAGCAGCAAAAGAAGACTTCCACGAGCTTGGAAGTATTCCAATTGTTCCAAGTGACCCCAAAAGT
GCTGGTGTCATCTTCGTTCTCGAGAGAGCTTCTCTGGAGGTCGCCAAAGTTAAGGGGAATTATGAGCTGTTAAATTCCGATGACCATTCCAAAATTATTCGGAGATACAA
CAGAAATCCTGGAGATTACAGACCAGATATCTGCCATCAAGCTCTGTTGAATATTTTCGATAGCCGCATTGCAAAGGCTGGGAGGTTGAAAGCCGTTTATGTGAAAACTG
AGAAAGGCTTATTGATTGAAATTAAACCATATGTTCGTCTGCCAAGGACGCAAAAGCGCTTTTATGGACTTATGTTGGAATTGCTACAAAAGTTAAGCATCACAGCTGTT
GGCCAGCGTGATAAACTTTTACGCCTGATCAAAAATCCTGTAACTCAATATTTACCTGCCAATTCTCGTAAGATGGGCTTCTCACACAGTTCAAACAAGTTGGTCAAGAT
GCAGAATTATCTGGATGCGGTCAAAGATGATGTAGACCTTGTTTTTGTGGTAGGTGCTATGGCTCATGGGAAAATTGATATTGATTACGCAGATGATCTTTTATCCATTT
CTAATTATCCTCTCAGTGCTGGTTGCTGTATTGCTGACATTTGCAAAGTTTTGGCCGACAAATGGAATGTATGGTGAACCATGCTGACAACTCTATATCATATTAAGTTT
CATATTCTTATTTCTTGTTTATGAAGTTGGGTAGTAGAGTTTAGAGGTGTTTTATTGTAGGGAACCATAACAGAAGAGATTCCATTATTTTCTAGTGATATATATAAATA
CATGAATATATGTATAAAATTTTTAATTCAACAACAATTGGGGTGATGAATTAGAACATGTAATTAAGTCATACATGATGCCGCCCCATTTGGGAACTGTAGTGGCAAGT
TCAGTTCTATTTAGGTATTTTATGTGTGTAGCGAATGCTCAATGGATTAAAGTTTCAAATATATCATGAATTTTACTATATTTCAA
Protein sequenceShow/hide protein sequence
MGRPFDAKGKKRKNREVYDRESTAPEKKSLGAEEPDEEEPLNGAAKEDFHELGSIPIVPSDPKSAGVIFVLERASLEVAKVKGNYELLNSDDHSKIIRRYNRNPGDYRPD
ICHQALLNIFDSRIAKAGRLKAVYVKTEKGLLIEIKPYVRLPRTQKRFYGLMLELLQKLSITAVGQRDKLLRLIKNPVTQYLPANSRKMGFSHSSNKLVKMQNYLDAVKD
DVDLVFVVGAMAHGKIDIDYADDLLSISNYPLSAGCCIADICKVLADKWNVW