CuGenDBv2

Gene ID	Sed0027852
Organism	Sechium edule (Chayote v1)
Description	Plant/T22K18-16 protein, putative
Genome location	LG04:28936063..28936966
RNA-Seq Expression	Sed0027852
Synteny	Sed0027852
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

XP_004137866.1 uncharacterized protein LOC101207081 [Cucumis sativus]

6.7e-50

73.29

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Query:  MNPIGDKKEKVTIRAVSRDEEGKKRVEKTQIHSHNIDTVKYVEKKLVDKGVQRLDRHPVHGRAGIGHPPPKSGRGGKFTWLGPGDAIENDLSPAPAAMDH
        M PI DKK+KVTIRAVSRDEEGKK VEK +I SHNIDT+KY+EKKL+DKG+QRL+RHPVHG  GIG PPPKSGRGGKFTW GPGDAIEN+LSPAP A+D 
Subjt:  MNPIGDKKEKVTIRAVSRDEEGKKRVEKTQIHSHNIDTVKYVEKKLVDKGVQRLDRHPVHGRAGIGHPPPKSGRGGKFTWLGPGDAIENDLSPAPAAMDH

Query:  KDPNYVDED--------LAGEVEVPPETAAP---ARVEVDPLLQLQ
        KDPNYVDE+        + GEVEVP   AAP   +RVEVDP LQLQ
Subjt:  KDPNYVDED--------LAGEVEVPPETAAP---ARVEVDPLLQLQ

XP_008442790.1 PREDICTED: uncharacterized protein LOC103486565 [Cucumis melo]

1.4e-47

70.27

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Query:  MNPIGDKKEKVTIRAVSRDEEGKKRVEKTQIHSHNIDTVKYVEKKLVDKGVQRLDRHPVHGRAGIGHPPPKSGRGGKFTWLGPGDAIENDLSPAPAAMDH
        M PI +KK+KVTIRAV+RDEEGKK +EK +I SHNIDT+KY+EKKL+DKGVQRL+RHPVHG  GI  PPPKSGRGGKFTW GPGDAIEN+LSPAP A+D 
Subjt:  MNPIGDKKEKVTIRAVSRDEEGKKRVEKTQIHSHNIDTVKYVEKKLVDKGVQRLDRHPVHGRAGIGHPPPKSGRGGKFTWLGPGDAIENDLSPAPAAMDH

Query:  KDPNYVDED----------LAGEVEVPPETAAP---ARVEVDPLLQLQ
        KDPNYVDE           + GEVEVP   AAP   +RVEVDP LQLQ
Subjt:  KDPNYVDED----------LAGEVEVPPETAAP---ARVEVDPLLQLQ

XP_022144711.1 uncharacterized protein LOC111014332 [Momordica charantia]

6.9e-47

73.57

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Query:  MNPIGD-KKEKVTIRAVSRDEEGKKRVEKTQIHSHNIDTVKYVEKKLVDKGVQRLDRHPVHGRAGIGHPPPKSGRGGKFTWLGPGDAIENDLSPAPAAMD
        M P  D +KEKVTIRA SRDEEGKKRVEKT +H+H+IDTVKYVEKKL+DKGVQRLDRHP  GR+GIG PPPKSGRGGK+TW GPG AIEN LSP PAA+D
Subjt:  MNPIGD-KKEKVTIRAVSRDEEGKKRVEKTQIHSHNIDTVKYVEKKLVDKGVQRLDRHPVHGRAGIGHPPPKSGRGGKFTWLGPGDAIENDLSPAPAAMD

Query:  HKDPNYVDED-LAGEVEVPPETAA---PARVEVDPLLQLQ
         KDPN+VDE+ + GEVEVP   AA    +RVE+DP LQLQ
Subjt:  HKDPNYVDED-LAGEVEVPPETAA---PARVEVDPLLQLQ

XP_022935160.1 uncharacterized protein LOC111442115 [Cucurbita moschata]

1.5e-46

71.92

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Query:  MNPIGDKKEKVTIRAVSRDEEGKKRVEKTQIHSHNIDTVKYVEKKLVDKGVQRLDRHPVHGRAGIGHPPPKSGRGGKFTWLGPGDAIENDLSPAPAAMDH
        M PI DKKEKVTIRAVSRDEEGKKRVEK +I + NIDT+KYVEKKL+DKGVQRLDRHPVH R GI  PPPKSG GGKFTW GP DAIEN+LSPAPAA+D 
Subjt:  MNPIGDKKEKVTIRAVSRDEEGKKRVEKTQIHSHNIDTVKYVEKKLVDKGVQRLDRHPVHGRAGIGHPPPKSGRGGKFTWLGPGDAIENDLSPAPAAMDH

Query:  KDPNYVDED--------LAGEVEVPPETAAP---ARVEVDPLLQLQ
         DPNYVDE         + GEVEV    A     ARVEVDP LQLQ
Subjt:  KDPNYVDED--------LAGEVEVPPETAAP---ARVEVDPLLQLQ

XP_038904411.1 uncharacterized protein LOC120090774 [Benincasa hispida]

1.8e-47

71.72

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Query:  MNPIGDKKEKVTIRAVSRDEEGKKRVEKTQIHSHNIDTVKYVEKKLVDKGVQRLDRHPVHGRAGIGHPPPKSGRGGKFTWLGPGDAIENDLSPAPAAMDH
        M PI +KK+KVTIRAV+R+EEGKK VEK +I SHNIDT+KY+EKKL+DKGVQRL+RHPVHG  GI  PPPKSGRGGKFTW GPGDAIEN+LSPAPAA+D 
Subjt:  MNPIGDKKEKVTIRAVSRDEEGKKRVEKTQIHSHNIDTVKYVEKKLVDKGVQRLDRHPVHGRAGIGHPPPKSGRGGKFTWLGPGDAIENDLSPAPAAMDH

Query:  KDPNYVD-----EDLAG----EVEVPPETA-APARVEVDPLLQLQ
        KDPNYVD     E++AG    EVEVP   A   +RVEVDP LQLQ
Subjt:  KDPNYVD-----EDLAG----EVEVPPETA-APARVEVDPLLQLQ

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LDV1 Uncharacterized protein

3.2e-50

73.29

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Query:  MNPIGDKKEKVTIRAVSRDEEGKKRVEKTQIHSHNIDTVKYVEKKLVDKGVQRLDRHPVHGRAGIGHPPPKSGRGGKFTWLGPGDAIENDLSPAPAAMDH
        M PI DKK+KVTIRAVSRDEEGKK VEK +I SHNIDT+KY+EKKL+DKG+QRL+RHPVHG  GIG PPPKSGRGGKFTW GPGDAIEN+LSPAP A+D 
Subjt:  MNPIGDKKEKVTIRAVSRDEEGKKRVEKTQIHSHNIDTVKYVEKKLVDKGVQRLDRHPVHGRAGIGHPPPKSGRGGKFTWLGPGDAIENDLSPAPAAMDH

Query:  KDPNYVDED--------LAGEVEVPPETAAP---ARVEVDPLLQLQ
        KDPNYVDE+        + GEVEVP   AAP   +RVEVDP LQLQ
Subjt:  KDPNYVDED--------LAGEVEVPPETAAP---ARVEVDPLLQLQ

A0A1S3B6J5 uncharacterized protein LOC103486565

6.8e-48

70.27

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Query:  MNPIGDKKEKVTIRAVSRDEEGKKRVEKTQIHSHNIDTVKYVEKKLVDKGVQRLDRHPVHGRAGIGHPPPKSGRGGKFTWLGPGDAIENDLSPAPAAMDH
        M PI +KK+KVTIRAV+RDEEGKK +EK +I SHNIDT+KY+EKKL+DKGVQRL+RHPVHG  GI  PPPKSGRGGKFTW GPGDAIEN+LSPAP A+D 
Subjt:  MNPIGDKKEKVTIRAVSRDEEGKKRVEKTQIHSHNIDTVKYVEKKLVDKGVQRLDRHPVHGRAGIGHPPPKSGRGGKFTWLGPGDAIENDLSPAPAAMDH

Query:  KDPNYVDED----------LAGEVEVPPETAAP---ARVEVDPLLQLQ
        KDPNYVDE           + GEVEVP   AAP   +RVEVDP LQLQ
Subjt:  KDPNYVDED----------LAGEVEVPPETAAP---ARVEVDPLLQLQ

A0A5A7TM42 Uncharacterized protein

6.8e-48

70.27

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Query:  MNPIGDKKEKVTIRAVSRDEEGKKRVEKTQIHSHNIDTVKYVEKKLVDKGVQRLDRHPVHGRAGIGHPPPKSGRGGKFTWLGPGDAIENDLSPAPAAMDH
        M PI +KK+KVTIRAV+RDEEGKK +EK +I SHNIDT+KY+EKKL+DKGVQRL+RHPVHG  GI  PPPKSGRGGKFTW GPGDAIEN+LSPAP A+D 
Subjt:  MNPIGDKKEKVTIRAVSRDEEGKKRVEKTQIHSHNIDTVKYVEKKLVDKGVQRLDRHPVHGRAGIGHPPPKSGRGGKFTWLGPGDAIENDLSPAPAAMDH

Query:  KDPNYVDED----------LAGEVEVPPETAAP---ARVEVDPLLQLQ
        KDPNYVDE           + GEVEVP   AAP   +RVEVDP LQLQ
Subjt:  KDPNYVDED----------LAGEVEVPPETAAP---ARVEVDPLLQLQ

A0A6J1CU79 uncharacterized protein LOC111014332

3.4e-47

73.57

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Query:  MNPIGD-KKEKVTIRAVSRDEEGKKRVEKTQIHSHNIDTVKYVEKKLVDKGVQRLDRHPVHGRAGIGHPPPKSGRGGKFTWLGPGDAIENDLSPAPAAMD
        M P  D +KEKVTIRA SRDEEGKKRVEKT +H+H+IDTVKYVEKKL+DKGVQRLDRHP  GR+GIG PPPKSGRGGK+TW GPG AIEN LSP PAA+D
Subjt:  MNPIGD-KKEKVTIRAVSRDEEGKKRVEKTQIHSHNIDTVKYVEKKLVDKGVQRLDRHPVHGRAGIGHPPPKSGRGGKFTWLGPGDAIENDLSPAPAAMD

Query:  HKDPNYVDED-LAGEVEVPPETAA---PARVEVDPLLQLQ
         KDPN+VDE+ + GEVEVP   AA    +RVE+DP LQLQ
Subjt:  HKDPNYVDED-LAGEVEVPPETAA---PARVEVDPLLQLQ

A0A6J1F9T7 uncharacterized protein LOC111442115

7.5e-47

71.92

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Query:  MNPIGDKKEKVTIRAVSRDEEGKKRVEKTQIHSHNIDTVKYVEKKLVDKGVQRLDRHPVHGRAGIGHPPPKSGRGGKFTWLGPGDAIENDLSPAPAAMDH
        M PI DKKEKVTIRAVSRDEEGKKRVEK +I + NIDT+KYVEKKL+DKGVQRLDRHPVH R GI  PPPKSG GGKFTW GP DAIEN+LSPAPAA+D 
Subjt:  MNPIGDKKEKVTIRAVSRDEEGKKRVEKTQIHSHNIDTVKYVEKKLVDKGVQRLDRHPVHGRAGIGHPPPKSGRGGKFTWLGPGDAIENDLSPAPAAMDH

Query:  KDPNYVDED--------LAGEVEVPPETAAP---ARVEVDPLLQLQ
         DPNYVDE         + GEVEV    A     ARVEVDP LQLQ
Subjt:  KDPNYVDED--------LAGEVEVPPETAAP---ARVEVDPLLQLQ

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT3G10020.1 unknown protein

7.9e-25

45.07

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Query:  IGDKKEKVTIRAVSRDEEGKKRVEKTQIHSHNIDTVKYVEKKLVDKGVQRLDRHPVHGRAGIGHPPPKSGRGGKFTWLGPGDAIENDLSPAPAAMDHKDP
        + + K  V +RA  ++EEG+K V+K ++ + N +T+K VE+KL++KGVQR+DRHP  G   +  PP KSG GGK+TW GP    + ++ P P AMD  DP
Subjt:  IGDKKEKVTIRAVSRDEEGKKRVEKTQIHSHNIDTVKYVEKKLVDKGVQRLDRHPVHGRAGIGHPPPKSGRGGKFTWLGPGDAIENDLSPAPAAMDHKDP

Query:  NYVDED------------LAGEVEVPPET-AAPARVEVDPLL
        NY +E             + GEVEV  E  A  ARVEVDP L
Subjt:  NYVDED------------LAGEVEVPPET-AAPARVEVDPLL

AT3G10020.2 unknown protein

8.2e-22

45.79

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Query:  IGDKKEKVTIRAVSRDEEGKKRVEKTQIHSHNIDTVKYVEKKLVDKGVQRLDRHPVHGRAGIGHPPPKSGRGGKFTWLGPGDAIENDLSPAPAAMDHKDP
        + + K  V +RA  ++EEG+K V+K ++ + N +T+K VE+KL++KGVQR+DRHP  G   +  PP KSG GGK+TW GP    + ++ P P AMD  DP
Subjt:  IGDKKEKVTIRAVSRDEEGKKRVEKTQIHSHNIDTVKYVEKKLVDKGVQRLDRHPVHGRAGIGHPPPKSGRGGKFTWLGPGDAIENDLSPAPAAMDHKDP

Query:  NYVDEDL
        NY +E +
Subjt:  NYVDEDL

Sequences

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CDS sequence

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ATGAACCCGATCGGCGACAAGAAAGAGAAAGTCACAATCCGAGCGGTTAGCCGCGACGAAGAAGGCAAAAAACGAGTCGAAAAAACCCAAATCCACTCTCACAACATCGA
TACCGTCAAATACGTCGAGAAGAAGCTCGTCGACAAGGGAGTCCAGCGGCTCGACCGCCACCCGGTCCATGGCCGGGCCGGCATCGGCCACCCGCCGCCCAAGTCCGGCC
GCGGCGGCAAGTTCACTTGGTTGGGCCCGGGCGATGCGATCGAGAACGACCTCTCGCCGGCGCCGGCGGCTATGGATCACAAGGATCCGAACTATGTGGATGAGGATCTG
GCCGGAGAAGTTGAGGTTCCGCCGGAGACGGCGGCGCCGGCGAGAGTTGAGGTGGATCCTCTGCTTCAATTGCAATGA

mRNA sequence

Show/hide mRNA sequence

GCTGGTTGTTAAAAACTTAGATTTAAAAACAAAAAATTAAAAATGAAATAGTTATCAATGGACTCTAAGAAATTAGGATTTATTTTGCAGGCTAAAAATATCAATTATAG
AACGTGTCAGAAAATTCTAGCACTCACCGCGGCACTGCTTCCAGACCTTTCCAGCCGCTTCAAGTCGTCTCTCCTTCAACCCTCCATTTAAAACCCTAAATCCCCAAATC
TCGAATTCCAAATCCCAATTCCACCATTGATCTCTGCAACAACCAACAACAAATAAAATCATGAACCCGATCGGCGACAAGAAAGAGAAAGTCACAATCCGAGCGGTTAG
CCGCGACGAAGAAGGCAAAAAACGAGTCGAAAAAACCCAAATCCACTCTCACAACATCGATACCGTCAAATACGTCGAGAAGAAGCTCGTCGACAAGGGAGTCCAGCGGC
TCGACCGCCACCCGGTCCATGGCCGGGCCGGCATCGGCCACCCGCCGCCCAAGTCCGGCCGCGGCGGCAAGTTCACTTGGTTGGGCCCGGGCGATGCGATCGAGAACGAC
CTCTCGCCGGCGCCGGCGGCTATGGATCACAAGGATCCGAACTATGTGGATGAGGATCTGGCCGGAGAAGTTGAGGTTCCGCCGGAGACGGCGGCGCCGGCGAGAGTTGA
GGTGGATCCTCTGCTTCAATTGCAATGAAATTGAGGCTTGGGAGGTGTTCGTTTTCAGTGGTTTTCTTTGTTGTGAAAATGGTATTATAAATAATAAGTTTGTATTTTCA
AAATGATCCCTGCACTCTTAACTTTTATTTATTAGTCCTTGATATTTAAGGAATGTATATTTTTATTCTAATCACTGGTTATTATAAGTTTCTTGTGAAACTCGAAGGTG
AATGAAATTCAAACTTTAGTTTAC

Protein sequence

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MNPIGDKKEKVTIRAVSRDEEGKKRVEKTQIHSHNIDTVKYVEKKLVDKGVQRLDRHPVHGRAGIGHPPPKSGRGGKFTWLGPGDAIENDLSPAPAAMDHKDPNYVDEDL
AGEVEVPPETAAPARVEVDPLLQLQ

Sed0027852 (gene) of Chayote v1 genome