; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0027858 (gene) of Chayote v1 genome

Gene IDSed0027858
OrganismSechium edule (Chayote v1)
Descriptionribosomal RNA small subunit methyltransferase NEP1
Genome locationLG06:39565589..39568337
RNA-Seq ExpressionSed0027858
SyntenySed0027858
Gene Ontology termsGO:0070475 - rRNA base methylation (biological process)
GO:0005730 - nucleolus (cellular component)
GO:0032040 - small-subunit processome (cellular component)
GO:0019843 - rRNA binding (molecular function)
GO:0070037 - rRNA (pseudouridine) methyltransferase activity (molecular function)
InterPro domainsIPR005304 - Ribosomal biogenesis, methyltransferase, EMG1/NEP1
IPR029026 - tRNA (guanine-N1-)-methyltransferase, N-terminal
IPR029028 - Alpha/beta knot methyltransferases


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7017643.1 Ribosomal RNA small subunit methyltransferase NEP1, partial [Cucurbita argyrosperma subsp. argyrosperma]2.5e-12585.66Show/hide
Query:  MVRPFAAKGKKRKKPEKYDRDDG--ESTSPAKKPTVD---EEQPVNEAAKDDFHELEGIPIVPKDPKTGNNAGVIFILERASLEVAKVGKSYQLLNSDDH
        MVRPFAAKGKKRKK E+YDRDD   EST+ AKK  V+   +EQP NEAA+++FHELEGIPIVPKDPK+ + AGVIF+LERASLEVAKVGK+YQLLNSDDH
Subjt:  MVRPFAAKGKKRKKPEKYDRDDG--ESTSPAKKPTVD---EEQPVNEAAKDDFHELEGIPIVPKDPKTGNNAGVIFILERASLEVAKVGKSYQLLNSDDH

Query:  SNFLRRNNRNPGDYKPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYG-----LQKLSITAAGKREKLFRVIKNPVTQYLP
        SNFLRRNNRNPGDY+PDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYG     LQKLSITAAGKREKLFRVIKNPVTQYLP
Subjt:  SNFLRRNNRNPGDYKPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYG-----LQKLSITAAGKREKLFRVIKNPVTQYLP

Query:  PNCRKMGFSKSSDKLIKVRKYLDAVKDDVDLVFVVGAMAHGKIETDYTDDLLAISEYPLSAGCCIADTCKDLADKWMVG
         N RKMGFS SSDKL+KVR YLDAV+DDVDLVFVVGAMAHGKIET YTDDLLAISEYPLSA CCIAD CKDLADKW VG
Subjt:  PNCRKMGFSKSSDKLIKVRKYLDAVKDDVDLVFVVGAMAHGKIETDYTDDLLAISEYPLSAGCCIADTCKDLADKWMVG

XP_004136640.2 ribosomal RNA small subunit methyltransferase nep-1 [Cucumis sativus]6.1e-12786.96Show/hide
Query:  MVRPFAAKGKKRKKPEKYDRDDG--ESTSPAKKPTVDEEQPVNEAAKDDFHELEGIPIVPKDPKTGNNAGVIFILERASLEVAKVGKSYQLLNSDDHSNF
        MVRPFAAKGKKRKK EKYDRD+   ESTSP+KK  + E +P  E AK+DFHELEGIPI PKDPK  +NAGVIFILERASLEVAKVGK+YQLLNSDDHSN+
Subjt:  MVRPFAAKGKKRKKPEKYDRDDG--ESTSPAKKPTVDEEQPVNEAAKDDFHELEGIPIVPKDPKTGNNAGVIFILERASLEVAKVGKSYQLLNSDDHSNF

Query:  LRRNNRNPGDYKPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYG-----LQKLSITAAGKREKLFRVIKNPVTQYLPPNC
        LRRNNRNPGDY+PDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYG     LQKLSITAAGKREKLFRVIKNPVTQYLP NC
Subjt:  LRRNNRNPGDYKPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYG-----LQKLSITAAGKREKLFRVIKNPVTQYLPPNC

Query:  RKMGFSKSSDKLIKVRKYLDAVKDDVDLVFVVGAMAHGKIETDYTDDLLAISEYPLSAGCCIADTCKDLADKWMVG
        RKMGFS SSDKL+KVR YLDAVKDDVDLVFVVGAMAHGKIETDYTDDLLAISEYPLSA CCIAD CKDLA+KW VG
Subjt:  RKMGFSKSSDKLIKVRKYLDAVKDDVDLVFVVGAMAHGKIETDYTDDLLAISEYPLSAGCCIADTCKDLADKWMVG

XP_008443268.1 PREDICTED: ribosomal RNA small subunit methyltransferase NEP1 [Cucumis melo]7.2e-12888.41Show/hide
Query:  MVRPFAAKGKKRKKPEKYDRD-DG-ESTSPAKKPTVDEEQPVNEAAKDDFHELEGIPIVPKDPKTGNNAGVIFILERASLEVAKVGKSYQLLNSDDHSNF
        MVRPFAAKGKKRKK EKYDRD DG ES+SPAKK  V E +P  E  K+DFHELEGIPIVPKDPKT NNAGVIFILERASLEVAKVGK+YQLLNSDDHSN+
Subjt:  MVRPFAAKGKKRKKPEKYDRD-DG-ESTSPAKKPTVDEEQPVNEAAKDDFHELEGIPIVPKDPKTGNNAGVIFILERASLEVAKVGKSYQLLNSDDHSNF

Query:  LRRNNRNPGDYKPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYG-----LQKLSITAAGKREKLFRVIKNPVTQYLPPNC
        LRRNNRNPGDY+PDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYG     LQKLSITAAGKREKLFRVIKNPVTQYLP NC
Subjt:  LRRNNRNPGDYKPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYG-----LQKLSITAAGKREKLFRVIKNPVTQYLPPNC

Query:  RKMGFSKSSDKLIKVRKYLDAVKDDVDLVFVVGAMAHGKIETDYTDDLLAISEYPLSAGCCIADTCKDLADKWMVG
        RKMGFS SSDKL+K+R YLDAVKDDVDLVFVVGAMAHGKIETDYTDDLLAISEYPLSA CCIAD CKDLA+KW VG
Subjt:  RKMGFSKSSDKLIKVRKYLDAVKDDVDLVFVVGAMAHGKIETDYTDDLLAISEYPLSAGCCIADTCKDLADKWMVG

XP_022935622.1 ribosomal RNA small subunit methyltransferase nep-1 [Cucurbita moschata]2.5e-12585.66Show/hide
Query:  MVRPFAAKGKKRKKPEKYDRDDG--ESTSPAKKPTVD---EEQPVNEAAKDDFHELEGIPIVPKDPKTGNNAGVIFILERASLEVAKVGKSYQLLNSDDH
        MVRPFAAKGKKRKK E+YDRDD   EST+ AKK  V+   +EQP NEAA+++FHELEGIPIVPKDPK+ + AGVIF+LERASLEVAKVGK+YQLLNSDDH
Subjt:  MVRPFAAKGKKRKKPEKYDRDDG--ESTSPAKKPTVD---EEQPVNEAAKDDFHELEGIPIVPKDPKTGNNAGVIFILERASLEVAKVGKSYQLLNSDDH

Query:  SNFLRRNNRNPGDYKPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYG-----LQKLSITAAGKREKLFRVIKNPVTQYLP
        SNFLRRNNRNPGDY+PDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYG     LQKLSITAAGKREKLFRVIKNPVTQYLP
Subjt:  SNFLRRNNRNPGDYKPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYG-----LQKLSITAAGKREKLFRVIKNPVTQYLP

Query:  PNCRKMGFSKSSDKLIKVRKYLDAVKDDVDLVFVVGAMAHGKIETDYTDDLLAISEYPLSAGCCIADTCKDLADKWMVG
         N RKMGFS SSDKL+KVR YLDAV+DDVDLVFVVGAMAHGKIET YTDDLLAISEYPLSA CCIAD CKDLADKW VG
Subjt:  PNCRKMGFSKSSDKLIKVRKYLDAVKDDVDLVFVVGAMAHGKIETDYTDDLLAISEYPLSAGCCIADTCKDLADKWMVG

XP_038905075.1 ribosomal RNA small subunit methyltransferase nep-1 [Benincasa hispida]1.9e-12585.14Show/hide
Query:  MVRPFAAKGKKRKKPEKYDR--DDGESTSPAKKPTVDEEQPVNEAAKDDFHELEGIPIVPKDPKTGNNAGVIFILERASLEVAKVGKSYQLLNSDDHSNF
        MVRPFAAKGKKRKK EKYDR  DDGEST PAKKPT  E +P  E  K+DFHELEGIPIVPKDP +  +AGVIF+LERASLEVAKVGK+YQLLNSDDHSNF
Subjt:  MVRPFAAKGKKRKKPEKYDR--DDGESTSPAKKPTVDEEQPVNEAAKDDFHELEGIPIVPKDPKTGNNAGVIFILERASLEVAKVGKSYQLLNSDDHSNF

Query:  LRRNNRNPGDYKPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYG-----LQKLSITAAGKREKLFRVIKNPVTQYLPPNC
        LR+NNRNPGDY+PDILHQALLAIFDSRIAKAGRLK VYVKTEKGLLIE+KPYVRLPRTQKRFYG     LQKLSITAAGKREKLFRVIKNPVTQYLP N 
Subjt:  LRRNNRNPGDYKPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYG-----LQKLSITAAGKREKLFRVIKNPVTQYLPPNC

Query:  RKMGFSKSSDKLIKVRKYLDAVKDDVDLVFVVGAMAHGKIETDYTDDLLAISEYPLSAGCCIADTCKDLADKWMVG
        RKMGFS SSDKL+K+R YLDAV+DDVDLVFVVGAMAHGKIETDYTDDLLAISEYPLSA CCIAD CKDLA+KW +G
Subjt:  RKMGFSKSSDKLIKVRKYLDAVKDDVDLVFVVGAMAHGKIETDYTDDLLAISEYPLSAGCCIADTCKDLADKWMVG

TrEMBL top hitse value%identityAlignment
A0A0A0LFI3 Uncharacterized protein2.9e-12786.96Show/hide
Query:  MVRPFAAKGKKRKKPEKYDRDDG--ESTSPAKKPTVDEEQPVNEAAKDDFHELEGIPIVPKDPKTGNNAGVIFILERASLEVAKVGKSYQLLNSDDHSNF
        MVRPFAAKGKKRKK EKYDRD+   ESTSP+KK  + E +P  E AK+DFHELEGIPI PKDPK  +NAGVIFILERASLEVAKVGK+YQLLNSDDHSN+
Subjt:  MVRPFAAKGKKRKKPEKYDRDDG--ESTSPAKKPTVDEEQPVNEAAKDDFHELEGIPIVPKDPKTGNNAGVIFILERASLEVAKVGKSYQLLNSDDHSNF

Query:  LRRNNRNPGDYKPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYG-----LQKLSITAAGKREKLFRVIKNPVTQYLPPNC
        LRRNNRNPGDY+PDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYG     LQKLSITAAGKREKLFRVIKNPVTQYLP NC
Subjt:  LRRNNRNPGDYKPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYG-----LQKLSITAAGKREKLFRVIKNPVTQYLPPNC

Query:  RKMGFSKSSDKLIKVRKYLDAVKDDVDLVFVVGAMAHGKIETDYTDDLLAISEYPLSAGCCIADTCKDLADKWMVG
        RKMGFS SSDKL+KVR YLDAVKDDVDLVFVVGAMAHGKIETDYTDDLLAISEYPLSA CCIAD CKDLA+KW VG
Subjt:  RKMGFSKSSDKLIKVRKYLDAVKDDVDLVFVVGAMAHGKIETDYTDDLLAISEYPLSAGCCIADTCKDLADKWMVG

A0A1S3B7L0 ribosomal RNA small subunit methyltransferase NEP13.5e-12888.41Show/hide
Query:  MVRPFAAKGKKRKKPEKYDRD-DG-ESTSPAKKPTVDEEQPVNEAAKDDFHELEGIPIVPKDPKTGNNAGVIFILERASLEVAKVGKSYQLLNSDDHSNF
        MVRPFAAKGKKRKK EKYDRD DG ES+SPAKK  V E +P  E  K+DFHELEGIPIVPKDPKT NNAGVIFILERASLEVAKVGK+YQLLNSDDHSN+
Subjt:  MVRPFAAKGKKRKKPEKYDRD-DG-ESTSPAKKPTVDEEQPVNEAAKDDFHELEGIPIVPKDPKTGNNAGVIFILERASLEVAKVGKSYQLLNSDDHSNF

Query:  LRRNNRNPGDYKPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYG-----LQKLSITAAGKREKLFRVIKNPVTQYLPPNC
        LRRNNRNPGDY+PDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYG     LQKLSITAAGKREKLFRVIKNPVTQYLP NC
Subjt:  LRRNNRNPGDYKPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYG-----LQKLSITAAGKREKLFRVIKNPVTQYLPPNC

Query:  RKMGFSKSSDKLIKVRKYLDAVKDDVDLVFVVGAMAHGKIETDYTDDLLAISEYPLSAGCCIADTCKDLADKWMVG
        RKMGFS SSDKL+K+R YLDAVKDDVDLVFVVGAMAHGKIETDYTDDLLAISEYPLSA CCIAD CKDLA+KW VG
Subjt:  RKMGFSKSSDKLIKVRKYLDAVKDDVDLVFVVGAMAHGKIETDYTDDLLAISEYPLSAGCCIADTCKDLADKWMVG

A0A5D3DPQ6 Ribosomal RNA small subunit methyltransferase NEP13.5e-12888.41Show/hide
Query:  MVRPFAAKGKKRKKPEKYDRD-DG-ESTSPAKKPTVDEEQPVNEAAKDDFHELEGIPIVPKDPKTGNNAGVIFILERASLEVAKVGKSYQLLNSDDHSNF
        MVRPFAAKGKKRKK EKYDRD DG ES+SPAKK  V E +P  E  K+DFHELEGIPIVPKDPKT NNAGVIFILERASLEVAKVGK+YQLLNSDDHSN+
Subjt:  MVRPFAAKGKKRKKPEKYDRD-DG-ESTSPAKKPTVDEEQPVNEAAKDDFHELEGIPIVPKDPKTGNNAGVIFILERASLEVAKVGKSYQLLNSDDHSNF

Query:  LRRNNRNPGDYKPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYG-----LQKLSITAAGKREKLFRVIKNPVTQYLPPNC
        LRRNNRNPGDY+PDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYG     LQKLSITAAGKREKLFRVIKNPVTQYLP NC
Subjt:  LRRNNRNPGDYKPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYG-----LQKLSITAAGKREKLFRVIKNPVTQYLPPNC

Query:  RKMGFSKSSDKLIKVRKYLDAVKDDVDLVFVVGAMAHGKIETDYTDDLLAISEYPLSAGCCIADTCKDLADKWMVG
        RKMGFS SSDKL+K+R YLDAVKDDVDLVFVVGAMAHGKIETDYTDDLLAISEYPLSA CCIAD CKDLA+KW VG
Subjt:  RKMGFSKSSDKLIKVRKYLDAVKDDVDLVFVVGAMAHGKIETDYTDDLLAISEYPLSAGCCIADTCKDLADKWMVG

A0A6J1F634 ribosomal RNA small subunit methyltransferase nep-11.2e-12585.66Show/hide
Query:  MVRPFAAKGKKRKKPEKYDRDDG--ESTSPAKKPTVD---EEQPVNEAAKDDFHELEGIPIVPKDPKTGNNAGVIFILERASLEVAKVGKSYQLLNSDDH
        MVRPFAAKGKKRKK E+YDRDD   EST+ AKK  V+   +EQP NEAA+++FHELEGIPIVPKDPK+ + AGVIF+LERASLEVAKVGK+YQLLNSDDH
Subjt:  MVRPFAAKGKKRKKPEKYDRDDG--ESTSPAKKPTVD---EEQPVNEAAKDDFHELEGIPIVPKDPKTGNNAGVIFILERASLEVAKVGKSYQLLNSDDH

Query:  SNFLRRNNRNPGDYKPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYG-----LQKLSITAAGKREKLFRVIKNPVTQYLP
        SNFLRRNNRNPGDY+PDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYG     LQKLSITAAGKREKLFRVIKNPVTQYLP
Subjt:  SNFLRRNNRNPGDYKPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYG-----LQKLSITAAGKREKLFRVIKNPVTQYLP

Query:  PNCRKMGFSKSSDKLIKVRKYLDAVKDDVDLVFVVGAMAHGKIETDYTDDLLAISEYPLSAGCCIADTCKDLADKWMVG
         N RKMGFS SSDKL+KVR YLDAV+DDVDLVFVVGAMAHGKIET YTDDLLAISEYPLSA CCIAD CKDLADKW VG
Subjt:  PNCRKMGFSKSSDKLIKVRKYLDAVKDDVDLVFVVGAMAHGKIETDYTDDLLAISEYPLSAGCCIADTCKDLADKWMVG

A0A6J1J0G6 ribosomal RNA small subunit methyltransferase nep-16.1e-12585.3Show/hide
Query:  MVRPFAAKGKKRKKPEKYDRDDG--ESTSPAKKPTVD---EEQPVNEAAKDDFHELEGIPIVPKDPKTGNNAGVIFILERASLEVAKVGKSYQLLNSDDH
        MVRPFAAKGKKRKK E+YDRDD   ES + AKK  V+   +EQP NEAA+++FHELEGIPIVPKDPK+ + AGVIF+LERASLEVAKVGK+YQLLNSDDH
Subjt:  MVRPFAAKGKKRKKPEKYDRDDG--ESTSPAKKPTVD---EEQPVNEAAKDDFHELEGIPIVPKDPKTGNNAGVIFILERASLEVAKVGKSYQLLNSDDH

Query:  SNFLRRNNRNPGDYKPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYG-----LQKLSITAAGKREKLFRVIKNPVTQYLP
        SNFLRRNNRNPGDY+PDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYG     LQKLSITAAGKREKLFRVIKNPVTQYLP
Subjt:  SNFLRRNNRNPGDYKPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYG-----LQKLSITAAGKREKLFRVIKNPVTQYLP

Query:  PNCRKMGFSKSSDKLIKVRKYLDAVKDDVDLVFVVGAMAHGKIETDYTDDLLAISEYPLSAGCCIADTCKDLADKWMVG
         N RKMGFS SSDKL+KVR YLDAV+DDVDLVFVVGAMAHGKIET YTDDLLAISEYPLSA CCIAD CKDLADKW VG
Subjt:  PNCRKMGFSKSSDKLIKVRKYLDAVKDDVDLVFVVGAMAHGKIETDYTDDLLAISEYPLSAGCCIADTCKDLADKWMVG

SwissProt top hitse value%identityAlignment
O35130 Ribosomal RNA small subunit methyltransferase NEP11.3e-4245.37Show/hide
Query:  VIFILERASLEVAKVGKSYQLLNSDDHSNFLRRNNRNPGDYKPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYG-----L
        +I +LE ASLE  KVGK+Y+LLN D H + L +N R+PG+ +PDI HQ+LL + DS + +AG L+ VY+ T+K +LIE+ P  R+PRT  RF G     L
Subjt:  VIFILERASLEVAKVGKSYQLLNSDDHSNFLRRNNRNPGDYKPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYG-----L

Query:  QKLSITAAGKREKLFRVIKNPVTQYLPPNCRKMGFSKSSDKLIKVRKYLDAVKDDVDLVFVVGAMAHGKIETDYTDDLLAISEYPLSAGCCIADTCKDLA
         KLS+ AA   +KL +VIKNPV+ + P  C K+G S S + +  +R   + V     +VFVVGA AHGK+  +YT+ +++IS YPLSA    A       
Subjt:  QKLSITAAGKREKLFRVIKNPVTQYLPPNCRKMGFSKSSDKLIKVRKYLDAVKDDVDLVFVVGAMAHGKIETDYTDDLLAISEYPLSAGCCIADTCKDLA

Query:  DKWMV
        + W V
Subjt:  DKWMV

Q06287 Ribosomal RNA small subunit methyltransferase NEP15.8e-4039.44Show/hide
Query:  EEQPVNEAAKDDFHELEGIPIVPKDP-----KTGNNAGVIFILERASLEVAKV------GKSYQLLNSDDHSNFLRRNNRNPGDYKPDILHQALLAIFDS
        E+  V +A K    +     +VP+ P     K      +I +L  ASLE  K+      G  Y LLN DDH   L++  R+  + +PDI HQ LL + DS
Subjt:  EEQPVNEAAKDDFHELEGIPIVPKDP-----KTGNNAGVIFILERASLEVAKV------GKSYQLLNSDDHSNFLRRNNRNPGDYKPDILHQALLAIFDS

Query:  RIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYG-----LQKLSITAAGKREKLFRVIKNPVTQYLPPNCRKMGFSKSSDKLIKVRKYLDAVKDDV
         I KAG+L+ VY++T +G+LIE+ P VR+PRT KRF G     L KLSI +    EKL +VIKNP+T +LP  CRK+  S  +  +I+V+ Y++ + DD 
Subjt:  RIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYG-----LQKLSITAAGKREKLFRVIKNPVTQYLPPNCRKMGFSKSSDKLIKVRKYLDAVKDDV

Query:  DLVFVVGAMAHGK--IETDYTDDLLAISEYPLSAGCCIADTCKDLADKWMV
         +   VGAMA GK     +Y D+ + +S YPLSA    +  C    D W +
Subjt:  DLVFVVGAMAHGK--IETDYTDDLLAISEYPLSAGCCIADTCKDLADKWMV

Q92979 Ribosomal RNA small subunit methyltransferase NEP14.3e-4342.21Show/hide
Query:  DEEQPVNEAAKDDFHELEGIPIVPKDPK--TGNNAG---VIFILERASLEVAKVGKSYQLLNSDDHSNFLRRNNRNPGDYKPDILHQALLAIFDSRIAKA
        D  +P   +  +   + + +P  PK P+   GN  G   +I +LE ASLE  KVGK+Y+LLN D H + L +N R+PG+ +PDI HQ+LL + DS + +A
Subjt:  DEEQPVNEAAKDDFHELEGIPIVPKDPK--TGNNAG---VIFILERASLEVAKVGKSYQLLNSDDHSNFLRRNNRNPGDYKPDILHQALLAIFDSRIAKA

Query:  GRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYG-----LQKLSITAAGKREKLFRVIKNPVTQYLPPNCRKMGFSKSSDKLIKVRKYLDAVKDDVDLVFV
        G L+ VY+ T+K +LIE+ P  R+PRT  RF G     L KLS+ AA   +KL +VIKNPV+ + P  C K+G S S   +  VR   + V     +VFV
Subjt:  GRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYG-----LQKLSITAAGKREKLFRVIKNPVTQYLPPNCRKMGFSKSSDKLIKVRKYLDAVKDDVDLVFV

Query:  VGAMAHGKIETDYTDDLLAISEYPLSAGCCIADTCKDLADKWMV
        VGA AHGK+  +YT+ +++IS YPLSA    A       + W V
Subjt:  VGAMAHGKIETDYTDDLLAISEYPLSAGCCIADTCKDLADKWMV

Q9W4J5 Ribosomal RNA small subunit methyltransferase NEP11.5e-4042.86Show/hide
Query:  VIFILERASLEVAKVGKSYQLLNSDDHSNFLRRNNRNPGDYKPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYG-----L
        +I +LE A LE  KV  +++LLN DDH+  +R+N R+PG  +PDI HQ LL +FDS + +AG L+ V+V+TE  +LIEI P  R+PRT KRF G     L
Subjt:  VIFILERASLEVAKVGKSYQLLNSDDHSNFLRRNNRNPGDYKPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYG-----L

Query:  QKLSITAAGKREKLFRVIKNPVTQYLPPNCRKMGFSKSSDKLIKVRKYL-----DAVKDDVDLVFVVGAMAHGKIETDYTDDLLAISEYPLSAGCCIADT
         K  I A     +L  VIKNP+T ++P  C+K   S S   L   R  +      +   D  +V V+GA AHG ++TDYT++L +IS YPLSA    +  
Subjt:  QKLSITAAGKREKLFRVIKNPVTQYLPPNCRKMGFSKSSDKLIKVRKYL-----DAVKDDVDLVFVVGAMAHGKIETDYTDDLLAISEYPLSAGCCIADT

Query:  CKDLADKWMV
        C    + W V
Subjt:  CKDLADKWMV

Q9XX15 Ribosomal RNA small subunit methyltransferase nep-11.0e-3945.5Show/hide
Query:  ILERASLEVAKVGKSYQLLNSDDHSNFLRRNNRNPGDYKPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYG-----LQKL
        +LE  SLE AKVG  Y +L+SD H+NFLR+  ++P DY+PDILHQ LL + DS + +AG+L+ V+ +T K +L+++ P  R+PRT  RF G     L KL
Subjt:  ILERASLEVAKVGKSYQLLNSDDHSNFLRRNNRNPGDYKPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYG-----LQKL

Query:  SITAAGKREKLFRVIKNPVTQYLPPNCRKMGFSKSSDKLIKVRKYLDAVKDDVDLVFVVGAMAHGKIETDYTDDLLAISEYPLSAGCCIADTCKDLADKW
        SI AA   +KL  V+KNPV+ +LP   RKM  S +  +L    K L A + D  LV ++G +A GKI  DY D    IS YPLSA    A     L + W
Subjt:  SITAAGKREKLFRVIKNPVTQYLPPNCRKMGFSKSSDKLIKVRKYLDAVKDDVDLVFVVGAMAHGKIETDYTDDLLAISEYPLSAGCCIADTCKDLADKW

Arabidopsis top hitse value%identityAlignment
AT3G57000.1 nucleolar essential protein-related1.3e-7452.35Show/hide
Query:  MVRPFAAKGKKRK-KPEKYDRDDG---------------ESTSPAKKPTV-------DEEQPVNEAAKDDFHELEGIPIVPKDPKTGNNAGVIFILERAS
        MVRP+  K  KRK + E+YD+++                ES+  AKK +        DEE+   EA       + GIPIV   P     +G++F+LE+AS
Subjt:  MVRPFAAKGKKRK-KPEKYDRDDG---------------ESTSPAKKPTV-------DEEQPVNEAAKDDFHELEGIPIVPKDPKTGNNAGVIFILERAS

Query:  LEVAKVGKSYQLLNSDDHSNFLRRNNRNPGDYKPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYG-----LQKLSITAAG
        LEVAKVGK+YQLLNSDDH+NFL++NNRNP DY+PDI HQALL I DS + KAGRLK VYV+TEKG+L E+KP+VR+PRT KRF G     LQKLSITA  
Subjt:  LEVAKVGKSYQLLNSDDHSNFLRRNNRNPGDYKPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYG-----LQKLSITAAG

Query:  KREKLFRVIKNPVTQ-YLPPNCRKMGFSKSSDKLIKVRKYLDAV-KDDVDLVFVVGAMAHGKIETDYTDDLLAISEYPLSAGCCIADTCKDLADKWMV
         REKL R +KNP+ + +LP N  ++GFS SS+KL+ ++K+L  V  DD D VFVVGAMAHGKI+ +Y D+ +++SEYPLSA  CI+  C+ LA  W +
Subjt:  KREKLFRVIKNPVTQ-YLPPNCRKMGFSKSSDKLIKVRKYLDAV-KDDVDLVFVVGAMAHGKIETDYTDDLLAISEYPLSAGCCIADTCKDLADKWMV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTCGACCATTTGCAGCCAAGGGGAAGAAGAGAAAGAAACCTGAAAAATACGACAGGGACGACGGCGAATCAACCTCACCGGCGAAGAAGCCTACGGTGGATGAAGA
ACAACCAGTGAATGAAGCAGCAAAAGATGACTTCCACGAGCTTGAAGGTATTCCTATTGTCCCAAAAGACCCCAAAACTGGTAACAATGCTGGTGTCATCTTCATCCTCG
AAAGAGCTTCTCTCGAGGTCGCTAAAGTTGGGAAGAGCTACCAGTTGTTGAATTCCGACGACCACTCCAATTTTTTGCGGAGAAATAACAGGAATCCAGGGGATTACAAA
CCCGACATCCTGCATCAAGCTCTTTTGGCGATTTTCGATAGCCGCATTGCCAAGGCAGGGAGGTTGAAAGTTGTGTATGTGAAAACTGAGAAAGGTTTATTAATCGAAAT
CAAACCGTATGTTCGTCTTCCAAGGACGCAGAAACGGTTTTATGGACTACAAAAGTTGAGCATCACAGCTGCTGGTAAGCGTGAGAAACTTTTCCGGGTGATTAAGAATC
CTGTAACTCAGTATTTACCTCCCAATTGTCGTAAGATGGGCTTCTCGAAAAGCTCGGACAAGCTGATCAAGGTGCGGAAATACCTGGATGCTGTCAAAGATGATGTAGAC
CTTGTTTTTGTGGTGGGTGCAATGGCTCATGGGAAAATTGAGACCGACTATACTGATGATCTTTTAGCAATTTCTGAATATCCTCTCAGCGCTGGTTGCTGTATTGCGGA
TACTTGCAAAGATTTGGCAGATAAATGGATGGTAGGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTTCGACCATTTGCAGCCAAGGGGAAGAAGAGAAAGAAACCTGAAAAATACGACAGGGACGACGGCGAATCAACCTCACCGGCGAAGAAGCCTACGGTGGATGAAGA
ACAACCAGTGAATGAAGCAGCAAAAGATGACTTCCACGAGCTTGAAGGTATTCCTATTGTCCCAAAAGACCCCAAAACTGGTAACAATGCTGGTGTCATCTTCATCCTCG
AAAGAGCTTCTCTCGAGGTCGCTAAAGTTGGGAAGAGCTACCAGTTGTTGAATTCCGACGACCACTCCAATTTTTTGCGGAGAAATAACAGGAATCCAGGGGATTACAAA
CCCGACATCCTGCATCAAGCTCTTTTGGCGATTTTCGATAGCCGCATTGCCAAGGCAGGGAGGTTGAAAGTTGTGTATGTGAAAACTGAGAAAGGTTTATTAATCGAAAT
CAAACCGTATGTTCGTCTTCCAAGGACGCAGAAACGGTTTTATGGACTACAAAAGTTGAGCATCACAGCTGCTGGTAAGCGTGAGAAACTTTTCCGGGTGATTAAGAATC
CTGTAACTCAGTATTTACCTCCCAATTGTCGTAAGATGGGCTTCTCGAAAAGCTCGGACAAGCTGATCAAGGTGCGGAAATACCTGGATGCTGTCAAAGATGATGTAGAC
CTTGTTTTTGTGGTGGGTGCAATGGCTCATGGGAAAATTGAGACCGACTATACTGATGATCTTTTAGCAATTTCTGAATATCCTCTCAGCGCTGGTTGCTGTATTGCGGA
TACTTGCAAAGATTTGGCAGATAAATGGATGGTAGGGTGA
Protein sequenceShow/hide protein sequence
MVRPFAAKGKKRKKPEKYDRDDGESTSPAKKPTVDEEQPVNEAAKDDFHELEGIPIVPKDPKTGNNAGVIFILERASLEVAKVGKSYQLLNSDDHSNFLRRNNRNPGDYK
PDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGLQKLSITAAGKREKLFRVIKNPVTQYLPPNCRKMGFSKSSDKLIKVRKYLDAVKDDVD
LVFVVGAMAHGKIETDYTDDLLAISEYPLSAGCCIADTCKDLADKWMVG