; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0027888 (gene) of Chayote v1 genome

Gene IDSed0027888
OrganismSechium edule (Chayote v1)
DescriptionProtein FAR1-RELATED SEQUENCE
Genome locationLG06:4346643..4348407
RNA-Seq ExpressionSed0027888
SyntenySed0027888
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF3444518.1 hypothetical protein FNV43_RR14210 [Rhamnella rubrinervis]2.1e-4650.47Show/hide
Query:  MKREGRQHGMVRTYRILPSPVN----NGFINGYDSPPTAGLFTKAPSEPTNHSKFTGKCGRPRCSGCRMHPVCKAKNKTKGTHKLRSGDVNVNCRLVSWR
        MKREGRQHGMVRTY ILPSP+N      F+  +DSPPTAGLFTK  S+PTNHSKFTGKCGRPRC+GC MHP CK+K+KTKGT K++S DV  N RLV+WR
Subjt:  MKREGRQHGMVRTYRILPSPVN----NGFINGYDSPPTAGLFTKAPSEPTNHSKFTGKCGRPRCSGCRMHPVCKAKNKTKGTHKLRSGDVNVNCRLVSWR

Query:  VVDSNPLLGLNLFDMSALGIVDHL------------------WEDYGDEHDDNHCD-------LEDNLEIKNLEGNGVQSSGDDD-MDFCHVELVMDPAV
        VV+     GLN    SA GI++ L                    DY   + D   D       ++   +I N +G G     DDD M FC+V   +D   
Subjt:  VVDSNPLLGLNLFDMSALGIVDHL------------------WEDYGDEHDDNHCD-------LEDNLEIKNLEGNGVQSSGDDD-MDFCHVELVMDPAV

Query:  EDDQEWCLVGEM
        E+D++WCLVGEM
Subjt:  EDDQEWCLVGEM

KAF3957464.1 hypothetical protein CMV_017528 [Castanea mollissima]2.5e-4751.92Show/hide
Query:  MKREGRQHGMVRTYRILPSPVN----NGFINGYDSPPTAGLFTKAPSEPTNHSKFTGKCGRPRCSGCRMHPVCKAKNKTKGTHKLRSGDVNVNCRLVSWR
        M+REGRQHGMVRTY ILPS +N       +N YDSPPTAGLFTK PS+PTNHSKFTGKCG P C+GC  HP  K+KNK KGTHKL+S DV  N RL+SWR
Subjt:  MKREGRQHGMVRTYRILPSPVN----NGFINGYDSPPTAGLFTKAPSEPTNHSKFTGKCGRPRCSGCRMHPVCKAKNKTKGTHKLRSGDVNVNCRLVSWR

Query:  VVDSNPLLGLNLFDMSALGIVDHLWEDYGDEHDDN----HCDLEDN------------------LEIKNLEGNGVQSSGDDDMDFCHVELVMDPAVEDDQ
        V+D  P  GLN    SA GI+DHL+ D+ +++DD+    + D+ +N                  +EIK  +      + DD M FC V  V+D A E D+
Subjt:  VVDSNPLLGLNLFDMSALGIVDHLWEDYGDEHDDN----HCDLEDN------------------LEIKNLEGNGVQSSGDDDMDFCHVELVMDPAVEDDQ

Query:  EWCLVGEM
         WCLV EM
Subjt:  EWCLVGEM

XP_002526938.1 uncharacterized protein LOC8260322 [Ricinus communis]6.1e-4655.91Show/hide
Query:  MKREGRQHGMVRTYRILPSPVN----NGFINGYDSPPTAGLFTKAPSEPTNHSKFTGKCGRPRCSGCRMHPVCKAKNKTKGTHKLRSGDVNVNCRLVSWR
        MKREGRQHGMVRT RILPSP N    + FIN +DSPPTAGLFTK    PTNHSKFTGKCG+PRC+GC MHP CK+K+KTKGT KL+S DV  N RL+SWR
Subjt:  MKREGRQHGMVRTYRILPSPVN----NGFINGYDSPPTAGLFTKAPSEPTNHSKFTGKCGRPRCSGCRMHPVCKAKNKTKGTHKLRSGDVNVNCRLVSWR

Query:  VVDSNPLLGLNLFDMSALGIVDHLWEDYGDEHDDNHCDLEDNLEIKNLEGNGVQSSGDDDMDFCHVELVMDPAVEDDQEWCLVGEM
        VVD  P  GLN    SA  I+DH+ +D     DD   D E+ +     +G+       DD  +C V  ++D  VE D++WCLV E+
Subjt:  VVDSNPLLGLNLFDMSALGIVDHLWEDYGDEHDDNHCDLEDNLEIKNLEGNGVQSSGDDDMDFCHVELVMDPAVEDDQEWCLVGEM

XP_030956122.1 uncharacterized protein LOC115978242 [Quercus lobata]1.7e-4852.88Show/hide
Query:  MKREGRQHGMVRTYRILPSPVN----NGFINGYDSPPTAGLFTKAPSEPTNHSKFTGKCGRPRCSGCRMHPVCKAKNKTKGTHKLRSGDVNVNCRLVSWR
        MKREGRQHGMVRTYRILPS +N       +N YDSP TAGLFTK PS+PTNHSKFTGKCG P C+GC  HP CK+KNKTKGT KL+S DV  N RL+SWR
Subjt:  MKREGRQHGMVRTYRILPSPVN----NGFINGYDSPPTAGLFTKAPSEPTNHSKFTGKCGRPRCSGCRMHPVCKAKNKTKGTHKLRSGDVNVNCRLVSWR

Query:  VVDSNPLLGLNLFDMSALGIVDHLWEDYGDEHDD----------------------NHCDLEDNLEIKNLEGNGVQSSGDDDMDFCHVELVMDPAVEDDQ
        V+D  P  GLN    SA GI+DHL+ D+ ++ DD                      N+ D +  +EIK  +      + DD M FC V  V+D A E D+
Subjt:  VVDSNPLLGLNLFDMSALGIVDHLWEDYGDEHDD----------------------NHCDLEDNLEIKNLEGNGVQSSGDDDMDFCHVELVMDPAVEDDQ

Query:  EWCLVGEM
         WCLV EM
Subjt:  EWCLVGEM

XP_041006436.1 uncharacterized protein LOC121251158 [Juglans microcarpa x Juglans regia]3.5e-4654.73Show/hide
Query:  MKREGRQHGMVRTYRILPSPVN----NGFINGYDSPPTAGLFTKAPSEPTNHSKFTGKCGRPRCSGCRMHPVCKAKNKTKGTHKLRSGDVNVNCRLVSWR
        MKREGRQHGMVRTYRILPS VN      FIN +DSPPTAGLFTK PS+PTNHSKFTGKC  PRC+GC +HP  K+K K KG  KL+S DV +N R VSWR
Subjt:  MKREGRQHGMVRTYRILPSPVN----NGFINGYDSPPTAGLFTKAPSEPTNHSKFTGKCGRPRCSGCRMHPVCKAKNKTKGTHKLRSGDVNVNCRLVSWR

Query:  VVDSNPLLGLNLFDMSALGIVDHLWEDY---------GDEHDDNHCDL------EDNLEIKNLEGNGVQSSGDDD-MDFCHVELVMDPAVEDDQEWCLVG
        VVD  P  GLN   +SA  ++DHL  DY          DEH+++  DL       DN+E+     N  +   DDD M FC V L +D  VE+++ WCLV 
Subjt:  VVDSNPLLGLNLFDMSALGIVDHLWEDY---------GDEHDDNHCDL------EDNLEIKNLEGNGVQSSGDDD-MDFCHVELVMDPAVEDDQEWCLVG

Query:  E
        E
Subjt:  E

TrEMBL top hitse value%identityAlignment
A0A067LND4 Uncharacterized protein6.5e-4652.2Show/hide
Query:  MKREGRQHGMVRTYRILPSPVN----NGFINGYDSPPTAGLFTKAPSEPTNHSKFTGKCGRPRCSGCRMHPVCKAKNKTKGTHKLRSGDVNVNCRLVSWR
        MKREGRQHGMVRTYRILPSP N    + FIN ++SPPTAG FTK  S PTNHSKFTGKCG+PRC+ C M+P CK+K+KTKG HKL+S D   NCRL++WR
Subjt:  MKREGRQHGMVRTYRILPSPVN----NGFINGYDSPPTAGLFTKAPSEPTNHSKFTGKCGRPRCSGCRMHPVCKAKNKTKGTHKLRSGDVNVNCRLVSWR

Query:  VVDSNPLLGLNLFDMSALGIVDHLWEDYGDEHDDNHCD---------LEDNLEIKNL---------EGNGVQSSG--DDDMDFCHVELVMDPAVEDDQEW
        VVD  P  GLN    SA  I++ L  D  D++ D+  D         LED+ EI+           + NG+   G  DD+M FC V  V+D    +D+ W
Subjt:  VVDSNPLLGLNLFDMSALGIVDHLWEDYGDEHDDNHCD---------LEDNLEIKNL---------EGNGVQSSG--DDDMDFCHVELVMDPAVEDDQEW

Query:  CLVGE
        CLV E
Subjt:  CLVGE

A0A2N9F7S7 Uncharacterized protein1.9e-4552.61Show/hide
Query:  MKREGRQHGMVRTYRILPSPVN----NGFINGYDSPPTAGLFTKAPSEPTNHSKFTGKCGRPRCSGCRMHPVCKAKNKTKGTHKLRSGDVNVNCRLVSWR
        MKREGRQHGMVRTYRILPSP+N       IN ++ P TAGLFTK PS+PTNHSKFTGKCG   C+GC +HP CK+KNKTKGTHKL+S DV  N RL+SWR
Subjt:  MKREGRQHGMVRTYRILPSPVN----NGFINGYDSPPTAGLFTKAPSEPTNHSKFTGKCGRPRCSGCRMHPVCKAKNKTKGTHKLRSGDVNVNCRLVSWR

Query:  VVDSNPLLGLNLFDMSALGIVDHLWEDYGDEHDD------------------------NHCDLEDNLEIKNLEGNGVQSSGDDD-MDFCHVELVMDPAVE
        V+D  P  GLNL   SA  I+  L+ D+ +  DD                        N  D E  +EIK  E +  +  GDDD M FC V  V+D  VE
Subjt:  VVDSNPLLGLNLFDMSALGIVDHLWEDYGDEHDD------------------------NHCDLEDNLEIKNLEGNGVQSSGDDD-MDFCHVELVMDPAVE

Query:  DDQEWCLVGEM
         D+ WCLV EM
Subjt:  DDQEWCLVGEM

A0A7N2KZQ0 Uncharacterized protein8.2e-4952.88Show/hide
Query:  MKREGRQHGMVRTYRILPSPVN----NGFINGYDSPPTAGLFTKAPSEPTNHSKFTGKCGRPRCSGCRMHPVCKAKNKTKGTHKLRSGDVNVNCRLVSWR
        MKREGRQHGMVRTYRILPS +N       +N YDSP TAGLFTK PS+PTNHSKFTGKCG P C+GC  HP CK+KNKTKGT KL+S DV  N RL+SWR
Subjt:  MKREGRQHGMVRTYRILPSPVN----NGFINGYDSPPTAGLFTKAPSEPTNHSKFTGKCGRPRCSGCRMHPVCKAKNKTKGTHKLRSGDVNVNCRLVSWR

Query:  VVDSNPLLGLNLFDMSALGIVDHLWEDYGDEHDD----------------------NHCDLEDNLEIKNLEGNGVQSSGDDDMDFCHVELVMDPAVEDDQ
        V+D  P  GLN    SA GI+DHL+ D+ ++ DD                      N+ D +  +EIK  +      + DD M FC V  V+D A E D+
Subjt:  VVDSNPLLGLNLFDMSALGIVDHLWEDYGDEHDD----------------------NHCDLEDNLEIKNLEGNGVQSSGDDDMDFCHVELVMDPAVEDDQ

Query:  EWCLVGEM
         WCLV EM
Subjt:  EWCLVGEM

B9SLR9 Uncharacterized protein2.9e-4655.91Show/hide
Query:  MKREGRQHGMVRTYRILPSPVN----NGFINGYDSPPTAGLFTKAPSEPTNHSKFTGKCGRPRCSGCRMHPVCKAKNKTKGTHKLRSGDVNVNCRLVSWR
        MKREGRQHGMVRT RILPSP N    + FIN +DSPPTAGLFTK    PTNHSKFTGKCG+PRC+GC MHP CK+K+KTKGT KL+S DV  N RL+SWR
Subjt:  MKREGRQHGMVRTYRILPSPVN----NGFINGYDSPPTAGLFTKAPSEPTNHSKFTGKCGRPRCSGCRMHPVCKAKNKTKGTHKLRSGDVNVNCRLVSWR

Query:  VVDSNPLLGLNLFDMSALGIVDHLWEDYGDEHDDNHCDLEDNLEIKNLEGNGVQSSGDDDMDFCHVELVMDPAVEDDQEWCLVGEM
        VVD  P  GLN    SA  I+DH+ +D     DD   D E+ +     +G+       DD  +C V  ++D  VE D++WCLV E+
Subjt:  VVDSNPLLGLNLFDMSALGIVDHLWEDYGDEHDDNHCDLEDNLEIKNLEGNGVQSSGDDDMDFCHVELVMDPAVEDDQEWCLVGEM

W9S8I3 Uncharacterized protein5.0e-4653.17Show/hide
Query:  MKREGRQHGMVRTYRILPSPVN----NGFINGYDSPPTAGLFTKAPSEPTNHSKFTGKCGRPRCSGCRMHPVCKAKNKTKGTHKLRSGDVNVNCRLVSWR
        MKREGRQHGMVRTYRILP+P+N      F+N +DSP TAGLFT+ PS+PTNHSKFTGKC +PRC+GC +HP CKAK+KTKG  KL+S DV  N +L++WR
Subjt:  MKREGRQHGMVRTYRILPSPVN----NGFINGYDSPPTAGLFTKAPSEPTNHSKFTGKCGRPRCSGCRMHPVCKAKNKTKGTHKLRSGDVNVNCRLVSWR

Query:  VVDSNPLLGLNLFDMSALGIVDHLWEDYGDEHD---------DNHCD-------LEDNLEIKNLEGNGVQ-SSGDDD--MDFCHVELVMDPAVEDDQEWC
        VVDS P  GLN   +SA  IVDH+   +  +HD         D   D       ++  +EI N + +  Q   GDDD  M FC V  V++  VE D  WC
Subjt:  VVDSNPLLGLNLFDMSALGIVDHLWEDYGDEHD---------DNHCD-------LEDNLEIKNLEGNGVQ-SSGDDD--MDFCHVELVMDPAVEDDQEWC

Query:  LVGEM
        LVGEM
Subjt:  LVGEM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G41730.1 unknown protein4.2e-1340Show/hide
Query:  MKREGRQHGMVRTYRILPSPVN-NGFINGYDSPPTAGLFTKAPSEPTNHSKFTGKCGRPRCSGCRMHPVCKAKNKTKGTHKLRSGDVNVNCRLVSWRVVD
        MK EGR  G+VRT  I P   N     N  DSPP  G FTK PS+ TNHS  TG+  R + S C + P  K+ +K+KG  KL+           SW   D
Subjt:  MKREGRQHGMVRTYRILPSPVN-NGFINGYDSPPTAGLFTKAPSEPTNHSKFTGKCGRPRCSGCRMHPVCKAKNKTKGTHKLRSGDVNVNCRLVSWRVVD

Query:  S-NPLLGLNLFDMSALGIVDHLWEDYGDEH
          + L+G +    SA  I+D L  +  DEH
Subjt:  S-NPLLGLNLFDMSALGIVDHLWEDYGDEH

AT5G24640.1 unknown protein3.6e-1237.21Show/hide
Query:  MKREGRQHGMVRTYRILPSPVNNGFINGYDSPPTAGLFTKAPSEPTNHSKFTGKCGRPRCSGCRMHPVCKAKNKTKGTHKLRSGDVNVNCRLVSWRVVDS
        MK EGR  G+VRT  I P   N    N  DSPP  G FTK   + TNHS   G+  R + S C + P  K+ +K+KG  KL+           SW   D 
Subjt:  MKREGRQHGMVRTYRILPSPVNNGFINGYDSPPTAGLFTKAPSEPTNHSKFTGKCGRPRCSGCRMHPVCKAKNKTKGTHKLRSGDVNVNCRLVSWRVVDS

Query:  -NPLLGLNLFDMSALGIVDHLWEDYGDEH
         + L+G +    SA  I+D L  +  DE+
Subjt:  -NPLLGLNLFDMSALGIVDHLWEDYGDEH

AT5G40690.1 CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247)2.6e-3945.71Show/hide
Query:  MKREGRQHGMVRTYRILPSPVN----NGFINGYDSPPTAGLFTKAPSEPTNHSKFTGKCGRPRCSGCRMHPVCKAKNKTKGTHKLRSGDVNVNCRLVSWR
        MKREG+QHGMVRTYRILP  +N    +  +N   S PTAGLFTK  S+PTNHSKFTGKCG+ RC  C MHPV K+K KTKG+ K+R+ DV    ++++W+
Subjt:  MKREGRQHGMVRTYRILPSPVN----NGFINGYDSPPTAGLFTKAPSEPTNHSKFTGKCGRPRCSGCRMHPVCKAKNKTKGTHKLRSGDVNVNCRLVSWR

Query:  VVDSNPLLGLNLFDMSALGIVDHLWEDYGDEHD---DNHCDLEDNL-----EIKNLEGNG------VQSSGDDD--------MDFCHV--ELVMDPAVED
        V    P  GL L   SA GI+D + +DYG +HD   D   + E+N      E+ N++ +        + S DDD        M FC V   ++MD   E 
Subjt:  VVDSNPLLGLNLFDMSALGIVDHLWEDYGDEHD---DNHCDLEDNL-----EIKNLEGNG------VQSSGDDD--------MDFCHV--ELVMDPAVED

Query:  DQEWCLVGEM
        D+ W LV EM
Subjt:  DQEWCLVGEM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAAGAGAAGGCCGGCAACACGGCATGGTCCGAACCTACCGGATCCTCCCGTCACCGGTCAATAACGGGTTCATCAACGGCTACGATTCCCCGCCGACTGCTGGATT
GTTCACCAAAGCCCCATCCGAACCTACCAACCACTCCAAGTTTACCGGTAAGTGCGGTCGCCCCCGGTGCTCCGGTTGCCGCATGCATCCGGTTTGCAAGGCTAAGAACA
AAACCAAAGGCACACACAAGCTTCGATCGGGCGATGTCAATGTCAATTGTCGACTAGTAAGTTGGCGAGTTGTGGATTCGAACCCGTTGCTCGGGTTGAATCTATTCGAC
ATGTCGGCTTTGGGGATCGTGGATCACCTGTGGGAAGACTATGGGGATGAACATGATGATAACCATTGTGATTTGGAAGATAATTTGGAGATCAAGAATCTTGAAGGAAA
TGGTGTTCAATCAAGTGGTGATGATGATATGGATTTCTGCCATGTGGAACTTGTTATGGACCCTGCTGTAGAGGATGACCAAGAATGGTGCTTAGTGGGTGAAATGTAA
mRNA sequenceShow/hide mRNA sequence
TCATCCTTCAATTTCATTTTCTTTATAACATCCAATTTGCCAGAAATTTAAAAAACAAAAAAAAAAATGAAAAGAGAAGGCCGGCAACACGGCATGGTCCGAACCTACCG
GATCCTCCCGTCACCGGTCAATAACGGGTTCATCAACGGCTACGATTCCCCGCCGACTGCTGGATTGTTCACCAAAGCCCCATCCGAACCTACCAACCACTCCAAGTTTA
CCGGTAAGTGCGGTCGCCCCCGGTGCTCCGGTTGCCGCATGCATCCGGTTTGCAAGGCTAAGAACAAAACCAAAGGCACACACAAGCTTCGATCGGGCGATGTCAATGTC
AATTGTCGACTAGTAAGTTGGCGAGTTGTGGATTCGAACCCGTTGCTCGGGTTGAATCTATTCGACATGTCGGCTTTGGGGATCGTGGATCACCTGTGGGAAGACTATGG
GGATGAACATGATGATAACCATTGTGATTTGGAAGATAATTTGGAGATCAAGAATCTTGAAGGAAATGGTGTTCAATCAAGTGGTGATGATGATATGGATTTCTGCCATG
TGGAACTTGTTATGGACCCTGCTGTAGAGGATGACCAAGAATGGTGCTTAGTGGGTGAAATGTAA
Protein sequenceShow/hide protein sequence
MKREGRQHGMVRTYRILPSPVNNGFINGYDSPPTAGLFTKAPSEPTNHSKFTGKCGRPRCSGCRMHPVCKAKNKTKGTHKLRSGDVNVNCRLVSWRVVDSNPLLGLNLFD
MSALGIVDHLWEDYGDEHDDNHCDLEDNLEIKNLEGNGVQSSGDDDMDFCHVELVMDPAVEDDQEWCLVGEM