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Sed0027889 (gene) of Chayote v1 genome

Gene IDSed0027889
OrganismSechium edule (Chayote v1)
DescriptionIntracellular protein transporter USO1-like protein
Genome locationLG01:67590784..67591225
RNA-Seq ExpressionSed0027889
SyntenySed0027889
Gene Ontology termsNA
InterPro domainsIPR043424 - Protein BRANCHLESS TRICHOME-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0042702.1 putative Plasma membrane [Cucumis melo var. makuwa]1.0e-3079.12Show/hide
Query:  MLNNLIINQLSLKKGDNVHPEDAYGEDSCSNIGWRDQASPVKQWTIEAPEINMTQSSSSSKLPPGLKKNTLHTKLLQARSKGSRSRLKLFK
        +L+NLI NQLSLK GDN HPED YGE SCSN GWR+QASPV+QWT+ APEIN TQ SSS KLPPGLK+NTLH KLL+ARSKG+RSRLKLFK
Subjt:  MLNNLIINQLSLKKGDNVHPEDAYGEDSCSNIGWRDQASPVKQWTIEAPEINMTQSSSSSKLPPGLKKNTLHTKLLQARSKGSRSRLKLFK

XP_004143959.1 uncharacterized protein At5g41620 [Cucumis sativus]4.0e-3078.02Show/hide
Query:  MLNNLIINQLSLKKGDNVHPEDAYGEDSCSNIGWRDQASPVKQWTIEAPEINMTQSSSSSKLPPGLKKNTLHTKLLQARSKGSRSRLKLFK
        +L++LI NQLSLK GDN HPED YGE SCSN GWR+QASPV+QWT+ APEIN TQ SSS KLPPGLK+NTLH KLL+ARSKG+RSRLKLFK
Subjt:  MLNNLIINQLSLKKGDNVHPEDAYGEDSCSNIGWRDQASPVKQWTIEAPEINMTQSSSSSKLPPGLKKNTLHTKLLQARSKGSRSRLKLFK

XP_008437362.1 PREDICTED: uncharacterized protein At5g41620 [Cucumis melo]1.0e-3079.12Show/hide
Query:  MLNNLIINQLSLKKGDNVHPEDAYGEDSCSNIGWRDQASPVKQWTIEAPEINMTQSSSSSKLPPGLKKNTLHTKLLQARSKGSRSRLKLFK
        +L+NLI NQLSLK GDN HPED YGE SCSN GWR+QASPV+QWT+ APEIN TQ SSS KLPPGLK+NTLH KLL+ARSKG+RSRLKLFK
Subjt:  MLNNLIINQLSLKKGDNVHPEDAYGEDSCSNIGWRDQASPVKQWTIEAPEINMTQSSSSSKLPPGLKKNTLHTKLLQARSKGSRSRLKLFK

XP_022145987.1 uncharacterized protein At5g41620 [Momordica charantia]7.0e-3585.71Show/hide
Query:  MLNNLIINQLSLKKGDNVHPEDAYGEDSCSNIGWRDQASPVKQWTIEAPEINMTQSSSSSKLPPGLKKNTLHTKLLQARSKGSRSRLKLFK
        ML+NLI NQLSLK GDNVHPED YGE SCSN GWR+QASPV+QWTI APEINMTQSSSSSKLPPGLK+NTLH KLL+ARSKG+RSRLKLFK
Subjt:  MLNNLIINQLSLKKGDNVHPEDAYGEDSCSNIGWRDQASPVKQWTIEAPEINMTQSSSSSKLPPGLKKNTLHTKLLQARSKGSRSRLKLFK

XP_038875278.1 uncharacterized protein At5g41620-like [Benincasa hispida]2.5e-3282.42Show/hide
Query:  MLNNLIINQLSLKKGDNVHPEDAYGEDSCSNIGWRDQASPVKQWTIEAPEINMTQSSSSSKLPPGLKKNTLHTKLLQARSKGSRSRLKLFK
        ML+NLI NQLSLK GDNVHPED YGE SCSN GWR+QASPV+QWT+ APEINMTQ SSS KLPPGLK+NTLH KLL+ARSKG+RSRLKLFK
Subjt:  MLNNLIINQLSLKKGDNVHPEDAYGEDSCSNIGWRDQASPVKQWTIEAPEINMTQSSSSSKLPPGLKKNTLHTKLLQARSKGSRSRLKLFK

TrEMBL top hitse value%identityAlignment
A0A0A0KK47 Uncharacterized protein1.9e-3078.02Show/hide
Query:  MLNNLIINQLSLKKGDNVHPEDAYGEDSCSNIGWRDQASPVKQWTIEAPEINMTQSSSSSKLPPGLKKNTLHTKLLQARSKGSRSRLKLFK
        +L++LI NQLSLK GDN HPED YGE SCSN GWR+QASPV+QWT+ APEIN TQ SSS KLPPGLK+NTLH KLL+ARSKG+RSRLKLFK
Subjt:  MLNNLIINQLSLKKGDNVHPEDAYGEDSCSNIGWRDQASPVKQWTIEAPEINMTQSSSSSKLPPGLKKNTLHTKLLQARSKGSRSRLKLFK

A0A1S3AUF0 uncharacterized protein At5g416205.1e-3179.12Show/hide
Query:  MLNNLIINQLSLKKGDNVHPEDAYGEDSCSNIGWRDQASPVKQWTIEAPEINMTQSSSSSKLPPGLKKNTLHTKLLQARSKGSRSRLKLFK
        +L+NLI NQLSLK GDN HPED YGE SCSN GWR+QASPV+QWT+ APEIN TQ SSS KLPPGLK+NTLH KLL+ARSKG+RSRLKLFK
Subjt:  MLNNLIINQLSLKKGDNVHPEDAYGEDSCSNIGWRDQASPVKQWTIEAPEINMTQSSSSSKLPPGLKKNTLHTKLLQARSKGSRSRLKLFK

A0A5A7TH19 Putative Plasma membrane5.1e-3179.12Show/hide
Query:  MLNNLIINQLSLKKGDNVHPEDAYGEDSCSNIGWRDQASPVKQWTIEAPEINMTQSSSSSKLPPGLKKNTLHTKLLQARSKGSRSRLKLFK
        +L+NLI NQLSLK GDN HPED YGE SCSN GWR+QASPV+QWT+ APEIN TQ SSS KLPPGLK+NTLH KLL+ARSKG+RSRLKLFK
Subjt:  MLNNLIINQLSLKKGDNVHPEDAYGEDSCSNIGWRDQASPVKQWTIEAPEINMTQSSSSSKLPPGLKKNTLHTKLLQARSKGSRSRLKLFK

A0A6J1CY88 uncharacterized protein At5g416203.4e-3585.71Show/hide
Query:  MLNNLIINQLSLKKGDNVHPEDAYGEDSCSNIGWRDQASPVKQWTIEAPEINMTQSSSSSKLPPGLKKNTLHTKLLQARSKGSRSRLKLFK
        ML+NLI NQLSLK GDNVHPED YGE SCSN GWR+QASPV+QWTI APEINMTQSSSSSKLPPGLK+NTLH KLL+ARSKG+RSRLKLFK
Subjt:  MLNNLIINQLSLKKGDNVHPEDAYGEDSCSNIGWRDQASPVKQWTIEAPEINMTQSSSSSKLPPGLKKNTLHTKLLQARSKGSRSRLKLFK

A0A6J1K6U9 uncharacterized protein At5g41620-like2.1e-2471.28Show/hide
Query:  MLNNLIINQLSLKKGDNVHPEDAYGEDSCSNIGWRDQASPVKQW-TIEAPEINMT--QSSSSSKLPPGLKKNTLHTKLLQARSKGSRSRLKLFK
        ML+ +I NQ  L  GDNVHPE+A+GE SCSN GWR++ASPV+QW T  APEIN    QSS+SSKLPPGLK+NTLH KLL+AR+KGSRSRLKLFK
Subjt:  MLNNLIINQLSLKKGDNVHPEDAYGEDSCSNIGWRDQASPVKQW-TIEAPEINMT--QSSSSSKLPPGLKKNTLHTKLLQARSKGSRSRLKLFK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGAACAATCTTATCATAAATCAACTCTCATTGAAGAAGGGAGACAATGTGCATCCTGAAGATGCTTACGGTGAGGACTCATGCAGCAACATAGGGTGGAGGGATCA
AGCAAGTCCAGTGAAACAGTGGACTATAGAAGCCCCAGAGATCAACATGACACAGTCGTCTTCATCGTCTAAATTGCCTCCCGGACTAAAGAAGAACACTCTACACACAA
AACTTCTCCAAGCAAGGTCGAAGGGGAGTCGGTCACGGTTAAAACTTTTCAAGTGA
mRNA sequenceShow/hide mRNA sequence
GGGCAATGTCTTGCGTTGGAAACAAGAAAGACCAGTTGCTAAACACCAAAACAAAAGAACTCCCTGACGAACTTAACGAACCACAAAGAAATGTCTAGACACCAACGGCG
AAAGTGACGAGGAAAGAAACAGTCAACACTCGATCCATGGCTCGAATACAAGCCACATGTTGAACAATCTTATCATAAATCAACTCTCATTGAAGAAGGGAGACAATGTG
CATCCTGAAGATGCTTACGGTGAGGACTCATGCAGCAACATAGGGTGGAGGGATCAAGCAAGTCCAGTGAAACAGTGGACTATAGAAGCCCCAGAGATCAACATGACACA
GTCGTCTTCATCGTCTAAATTGCCTCCCGGACTAAAGAAGAACACTCTACACACAAAACTTCTCCAAGCAAGGTCGAAGGGGAGTCGGTCACGGTTAAAACTTTTCAAGT
GA
Protein sequenceShow/hide protein sequence
MLNNLIINQLSLKKGDNVHPEDAYGEDSCSNIGWRDQASPVKQWTIEAPEINMTQSSSSSKLPPGLKKNTLHTKLLQARSKGSRSRLKLFK