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Sed0027890 (gene) of Chayote v1 genome

Gene IDSed0027890
OrganismSechium edule (Chayote v1)
DescriptionTify domain-containing protein
Genome locationLG13:4904811..4905769
RNA-Seq ExpressionSed0027890
SyntenySed0027890
Gene Ontology termsGO:0009611 - response to wounding (biological process)
GO:0031347 - regulation of defense response (biological process)
GO:2000022 - regulation of jasmonic acid mediated signaling pathway (biological process)
GO:0005634 - nucleus (cellular component)
InterPro domainsIPR018467 - CO/COL/TOC1, conserved site
IPR040390 - TIFY/JAZ family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0062921.1 protein TIFY 5A-like [Cucumis melo var. makuwa]2.5e-3569.29Show/hide
Query:  MGREFSLELGLWPS-SEPTFQLSAIPMMAVPFHLNH---QQQIMVFYNGTPSMYDLTELQVRAILWFASREGNNSTRWSDSEPSSLWMPKSEDRHGTAGF
        MGREFSLELGLWPS SEPTFQ SAIPMMA+PF LNH   QQQIMVFYNG  S+ D TELQ RAILW  S+E + + R  + E  ++ M KS D +G AGF
Subjt:  MGREFSLELGLWPS-SEPTFQLSAIPMMAVPFHLNH---QQQIMVFYNGTPSMYDLTELQVRAILWFASREGNNSTRWSDSEPSSLWMPKSEDRHGTAGF

Query:  SIKKSLQRFLQRRKARRNRSMSPYKKL
        SIKKSLQRFLQRRK RR R+MSPY KL
Subjt:  SIKKSLQRFLQRRKARRNRSMSPYKKL
KAG6577084.1 Protein TIFY 5A, partial [Cucurbita argyrosperma subsp. sororia]1.7e-3672.87Show/hide
Query:  MGREFSLELGLWPS---SEPTFQLSAIP-MMAVPFHLNHQQQIMVFYNGTPSMYDLTELQVRAILWFASRE-GNNSTRWSDSE-PSSLWMPKSEDRHGTA
        MGREFSLELGLWPS   SEP FQ SAIP MMA+PF LN QQQIMVFYNGT S+ D TELQ RAILW ASRE  +N++RW+D E  S L MPKS + +G A
Subjt:  MGREFSLELGLWPS---SEPTFQLSAIP-MMAVPFHLNHQQQIMVFYNGTPSMYDLTELQVRAILWFASRE-GNNSTRWSDSE-PSSLWMPKSEDRHGTA

Query:  GFSIKKSLQRFLQRRKARRNRSMSPYKKL
         F IKKSLQRFLQRRKARR RSMSPY KL
Subjt:  GFSIKKSLQRFLQRRKARRNRSMSPYKKL
XP_008451847.1 PREDICTED: uncharacterized protein LOC103493010 [Cucumis melo]9.5e-3568.5Show/hide
Query:  MGREFSLELGLWPS-SEPTFQLSAIPMMAVPFHLNH---QQQIMVFYNGTPSMYDLTELQVRAILWFASREGNNSTRWSDSEPSSLWMPKSEDRHGTAGF
        MGREFSLELGLWPS SEPTFQ SAIPMMA+PF LNH   QQQIMVFYNG  S+ D TELQ RAILW  S+E + + R  + E  ++ M KS + +G AGF
Subjt:  MGREFSLELGLWPS-SEPTFQLSAIPMMAVPFHLNH---QQQIMVFYNGTPSMYDLTELQVRAILWFASREGNNSTRWSDSEPSSLWMPKSEDRHGTAGF

Query:  SIKKSLQRFLQRRKARRNRSMSPYKKL
        SIKKSLQRFLQRRK RR R+MSPY KL
Subjt:  SIKKSLQRFLQRRKARRNRSMSPYKKL
XP_022931286.1 uncharacterized protein LOC111437514 [Cucurbita moschata]2.2e-3672.87Show/hide
Query:  MGREFSLELGLWPS---SEPTFQLSAIP-MMAVPFHLNHQQQIMVFYNGTPSMYDLTELQVRAILWFASRE-GNNSTRWSDSE-PSSLWMPKSEDRHGTA
        MGREFSLELGLWPS   SEP FQ SAIP MMA PF LN QQQIMVFYNGT S+ D TELQ RAILW ASRE  +N++RW+D E  S L MPKS + +G A
Subjt:  MGREFSLELGLWPS---SEPTFQLSAIP-MMAVPFHLNHQQQIMVFYNGTPSMYDLTELQVRAILWFASRE-GNNSTRWSDSE-PSSLWMPKSEDRHGTA

Query:  GFSIKKSLQRFLQRRKARRNRSMSPYKKL
         F IKKSLQRFLQRRKARR RSMSPY KL
Subjt:  GFSIKKSLQRFLQRRKARRNRSMSPYKKL
XP_023553224.1 protein TIFY 9-like [Cucurbita pepo subsp. pepo]5.9e-3772.87Show/hide
Query:  MGREFSLELGLWPS---SEPTFQLSAIP-MMAVPFHLNHQQQIMVFYNGTPSMYDLTELQVRAILWFASRE-GNNSTRWSDSEP-SSLWMPKSEDRHGTA
        MGREFSLELGLWPS   SEP FQ SAIP MMA+PF LN QQQIMVFYNGT S+ D TELQ RAILW ASRE  +N++RW+D E  S L MPKS + +G A
Subjt:  MGREFSLELGLWPS---SEPTFQLSAIP-MMAVPFHLNHQQQIMVFYNGTPSMYDLTELQVRAILWFASRE-GNNSTRWSDSEP-SSLWMPKSEDRHGTA

Query:  GFSIKKSLQRFLQRRKARRNRSMSPYKKL
         F IKKSLQRFLQRRKARR RSMSPY KL
Subjt:  GFSIKKSLQRFLQRRKARRNRSMSPYKKL
TrEMBL top hitse value%identityAlignment
A0A1S3BSH9 uncharacterized protein LOC1034930104.6e-3568.5Show/hide
Query:  MGREFSLELGLWPS-SEPTFQLSAIPMMAVPFHLNH---QQQIMVFYNGTPSMYDLTELQVRAILWFASREGNNSTRWSDSEPSSLWMPKSEDRHGTAGF
        MGREFSLELGLWPS SEPTFQ SAIPMMA+PF LNH   QQQIMVFYNG  S+ D TELQ RAILW  S+E + + R  + E  ++ M KS + +G AGF
Subjt:  MGREFSLELGLWPS-SEPTFQLSAIPMMAVPFHLNH---QQQIMVFYNGTPSMYDLTELQVRAILWFASREGNNSTRWSDSEPSSLWMPKSEDRHGTAGF

Query:  SIKKSLQRFLQRRKARRNRSMSPYKKL
        SIKKSLQRFLQRRK RR R+MSPY KL
Subjt:  SIKKSLQRFLQRRKARRNRSMSPYKKL
A0A5A7VB54 Protein TIFY 5A-like1.2e-3569.29Show/hide
Query:  MGREFSLELGLWPS-SEPTFQLSAIPMMAVPFHLNH---QQQIMVFYNGTPSMYDLTELQVRAILWFASREGNNSTRWSDSEPSSLWMPKSEDRHGTAGF
        MGREFSLELGLWPS SEPTFQ SAIPMMA+PF LNH   QQQIMVFYNG  S+ D TELQ RAILW  S+E + + R  + E  ++ M KS D +G AGF
Subjt:  MGREFSLELGLWPS-SEPTFQLSAIPMMAVPFHLNH---QQQIMVFYNGTPSMYDLTELQVRAILWFASREGNNSTRWSDSEPSSLWMPKSEDRHGTAGF

Query:  SIKKSLQRFLQRRKARRNRSMSPYKKL
        SIKKSLQRFLQRRK RR R+MSPY KL
Subjt:  SIKKSLQRFLQRRKARRNRSMSPYKKL
A0A5D3CWX6 Protein TIFY 5A-like4.6e-3568.5Show/hide
Query:  MGREFSLELGLWPS-SEPTFQLSAIPMMAVPFHLNH---QQQIMVFYNGTPSMYDLTELQVRAILWFASREGNNSTRWSDSEPSSLWMPKSEDRHGTAGF
        MGREFSLELGLWPS SEPTFQ SAIPMMA+PF LNH   QQQIMVFYNG  S+ D TELQ RAILW  S+E + + R  + E  ++ M KS + +G AGF
Subjt:  MGREFSLELGLWPS-SEPTFQLSAIPMMAVPFHLNH---QQQIMVFYNGTPSMYDLTELQVRAILWFASREGNNSTRWSDSEPSSLWMPKSEDRHGTAGF

Query:  SIKKSLQRFLQRRKARRNRSMSPYKKL
        SIKKSLQRFLQRRK RR R+MSPY KL
Subjt:  SIKKSLQRFLQRRKARRNRSMSPYKKL
A0A6J1ET94 uncharacterized protein LOC1114375141.1e-3672.87Show/hide
Query:  MGREFSLELGLWPS---SEPTFQLSAIP-MMAVPFHLNHQQQIMVFYNGTPSMYDLTELQVRAILWFASRE-GNNSTRWSDSE-PSSLWMPKSEDRHGTA
        MGREFSLELGLWPS   SEP FQ SAIP MMA PF LN QQQIMVFYNGT S+ D TELQ RAILW ASRE  +N++RW+D E  S L MPKS + +G A
Subjt:  MGREFSLELGLWPS---SEPTFQLSAIP-MMAVPFHLNHQQQIMVFYNGTPSMYDLTELQVRAILWFASRE-GNNSTRWSDSE-PSSLWMPKSEDRHGTA

Query:  GFSIKKSLQRFLQRRKARRNRSMSPYKKL
         F IKKSLQRFLQRRKARR RSMSPY KL
Subjt:  GFSIKKSLQRFLQRRKARRNRSMSPYKKL
A0A6J1J887 uncharacterized protein LOC1114826357.8e-3568.66Show/hide
Query:  MGREFSLELGLWPS---SEPTFQLSAIP-MMAVPFHLNHQQQIMVFYNGTPSMYDLTELQVRAILWFASREGNNSTRWSDSE-PSSLWMPKS------ED
        MGREFSLELGLWPS   SE  FQ SAIP MMA+PF LN QQQIMVFYNGT S+ D TELQ RAILW ASRE ++++RW++ E  S L MPKS       +
Subjt:  MGREFSLELGLWPS---SEPTFQLSAIP-MMAVPFHLNHQQQIMVFYNGTPSMYDLTELQVRAILWFASREGNNSTRWSDSE-PSSLWMPKS------ED

Query:  RHGTAGFSIKKSLQRFLQRRKARRNRSMSPYKKL
         +G AGF IKKSLQRFLQRRKARR RSMSPY KL
Subjt:  RHGTAGFSIKKSLQRFLQRRKARRNRSMSPYKKL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G22275.1 unknown protein1.9e-0436.84Show/hide
Query:  QQIMVFYNGTPSMYDLTELQVRAILWFASREGNNSTRWSDSEPSSLWMPKSEDRHGTAGFSIKKSLQRFLQRRKAR
        ++I  FY+G  S YDL E+Q+RAI+  AS+         D E ++L +          G S+K+S++RFL++RK R
Subjt:  QQIMVFYNGTPSMYDLTELQVRAILWFASREGNNSTRWSDSEPSSLWMPKSEDRHGTAGFSIKKSLQRFLQRRKAR

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAAGGGAGTTTAGTTTGGAGCTTGGTCTTTGGCCTTCTTCAGAACCAACCTTCCAATTATCTGCAATTCCTATGATGGCTGTCCCATTCCATTTGAATCATCAGCA
GCAAATCATGGTTTTTTATAATGGAACACCTTCAATGTATGATTTAACTGAACTCCAGGTAAGAGCCATATTATGGTTTGCAAGCCGAGAGGGGAATAACAGCACGAGAT
GGAGTGACTCAGAACCATCGAGTTTGTGGATGCCAAAGAGCGAGGATCGACACGGGACTGCGGGTTTCTCCATTAAAAAATCTCTGCAGAGATTCCTACAAAGGAGAAAG
GCAAGAAGAAATCGATCAATGTCTCCATATAAAAAATTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGAAGGGAGTTTAGTTTGGAGCTTGGTCTTTGGCCTTCTTCAGAACCAACCTTCCAATTATCTGCAATTCCTATGATGGCTGTCCCATTCCATTTGAATCATCAGCA
GCAAATCATGGTTTTTTATAATGGAACACCTTCAATGTATGATTTAACTGAACTCCAGGTAAGAGCCATATTATGGTTTGCAAGCCGAGAGGGGAATAACAGCACGAGAT
GGAGTGACTCAGAACCATCGAGTTTGTGGATGCCAAAGAGCGAGGATCGACACGGGACTGCGGGTTTCTCCATTAAAAAATCTCTGCAGAGATTCCTACAAAGGAGAAAG
GCAAGAAGAAATCGATCAATGTCTCCATATAAAAAATTGTAA
Protein sequenceShow/hide protein sequence
MGREFSLELGLWPSSEPTFQLSAIPMMAVPFHLNHQQQIMVFYNGTPSMYDLTELQVRAILWFASREGNNSTRWSDSEPSSLWMPKSEDRHGTAGFSIKKSLQRFLQRRK
ARRNRSMSPYKKL