CuGenDBv2

Gene ID	Sed0027911
Organism	Sechium edule (Chayote v1)
Description	Rho GTPase-activating protein like
Genome location	LG01:70675723..70679179
RNA-Seq Expression	Sed0027911
Synteny	Sed0027911
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6606331.1 hypothetical protein SDJN03_03648, partial [Cucurbita argyrosperma subsp. sororia]

8.4e-58

63.88

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Query:  MASSCLLHNQPSISS----CHGNPIIFAHSQFLPLNSLKLRNQSFLSNSRFVKLRARRSSSSSPVVYAAQNQNNFLRVFQTAWKVGKDGIEAGTNLVPDS
        MASSCL HN PSISS     H N  IFAHSQFLPLNSLKLR QSFL NSR  KLR  R S S PVVYAA  QNNFLRVFQT WKVGKDGIEAGT+LVP S
Subjt:  MASSCLLHNQPSISS----CHGNPIIFAHSQFLPLNSLKLRNQSFLSNSRFVKLRARRSSSSSPVVYAAQNQNNFLRVFQTAWKVGKDGIEAGTNLVPDS

Query:  IPRPVARISVAIAALAVGLFLLKSVLSTALFVLSSSTPTTFISLKSYYLLDYLYLFSNYLIEECNKEVFMKECNKGFWMQAMMGAIYFTFIALNKDEGPR
        +PRPVARISVAIAAL++GLFLLKSVLSTA FVL                                               AM+GAIYF FIALNKDEGPR
Subjt:  IPRPVARISVAIAALAVGLFLLKSVLSTALFVLSSSTPTTFISLKSYYLLDYLYLFSNYLIEECNKEVFMKECNKGFWMQAMMGAIYFTFIALNKDEGPR

Query:  GGGGSSSSSTSTDETLEEARRIMEKYK
        GGGGS+SS+ ST+ETLEEAR+IMEKYK
Subjt:  GGGGSSSSSTSTDETLEEARRIMEKYK

XP_004152015.1 uncharacterized protein LOC101207451 isoform X1 [Cucumis sativus]

1.3e-55

61.23

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Query:  MASSCLLHNQPSIS----SCHGNPIIFAHSQFLPLNSLKLRNQSFLSNSRFVKLRARRSSSSSPVVYAAQNQNNFLRVFQTAWKVGKDGIEAGTNLVPDS
        MASSCL HN PSIS    + H NP I  HSQ LPLNSLKL+ QSFL N +  KLR  R S S P+VYAA  QNNFLRVFQT WK+GKDGIEAGT+LVPDS
Subjt:  MASSCLLHNQPSIS----SCHGNPIIFAHSQFLPLNSLKLRNQSFLSNSRFVKLRARRSSSSSPVVYAAQNQNNFLRVFQTAWKVGKDGIEAGTNLVPDS

Query:  IPRPVARISVAIAALAVGLFLLKSVLSTALFVLSSSTPTTFISLKSYYLLDYLYLFSNYLIEECNKEVFMKECNKGFWMQAMMGAIYFTFIALNKDEGPR
        +PRP+ARISV I AL +GLFL KSVLSTALFVL                                               AMMGAIYF FIALNKDEGPR
Subjt:  IPRPVARISVAIAALAVGLFLLKSVLSTALFVLSSSTPTTFISLKSYYLLDYLYLFSNYLIEECNKEVFMKECNKGFWMQAMMGAIYFTFIALNKDEGPR

Query:  GGGGSSSSSTSTDETLEEARRIMEKYK
        GGGGSSSS TST+ETLEEARRIMEKYK
Subjt:  GGGGSSSSSTSTDETLEEARRIMEKYK

XP_022931135.1 uncharacterized protein LOC111437405 [Cucurbita moschata]

5.0e-58

63.88

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Query:  MASSCLLHNQPSISS----CHGNPIIFAHSQFLPLNSLKLRNQSFLSNSRFVKLRARRSSSSSPVVYAAQNQNNFLRVFQTAWKVGKDGIEAGTNLVPDS
        MASSCL HN PSISS     H NP IFAHSQFLPLNSLKLR Q FL NSR  KLR  R S S PVVYAA  QNNFLRVFQT WKVGKDGIEAGT LVP S
Subjt:  MASSCLLHNQPSISS----CHGNPIIFAHSQFLPLNSLKLRNQSFLSNSRFVKLRARRSSSSSPVVYAAQNQNNFLRVFQTAWKVGKDGIEAGTNLVPDS

Query:  IPRPVARISVAIAALAVGLFLLKSVLSTALFVLSSSTPTTFISLKSYYLLDYLYLFSNYLIEECNKEVFMKECNKGFWMQAMMGAIYFTFIALNKDEGPR
        +PRPVARISVAIAAL++GLFLLKSVLSTA FVL                                               AM+GAIYF FIALNKDEGPR
Subjt:  IPRPVARISVAIAALAVGLFLLKSVLSTALFVLSSSTPTTFISLKSYYLLDYLYLFSNYLIEECNKEVFMKECNKGFWMQAMMGAIYFTFIALNKDEGPR

Query:  GGGGSSSSSTSTDETLEEARRIMEKYK
        GGGGS+SS+ ST+ETLEEAR+IMEKYK
Subjt:  GGGGSSSSSTSTDETLEEARRIMEKYK

XP_022996352.1 uncharacterized protein LOC111491610 [Cucurbita maxima]

2.9e-58

64.32

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Query:  MASSCLLHNQPSISS----CHGNPIIFAHSQFLPLNSLKLRNQSFLSNSRFVKLRARRSSSSSPVVYAAQNQNNFLRVFQTAWKVGKDGIEAGTNLVPDS
        MASSCL HN PSISS     H N  IFAHSQFLPLNSLKLR QSFL  SR  KLR  RSS+S PVVYAA  QNNFLRVFQT WKVGKDGIEAGT+LVPDS
Subjt:  MASSCLLHNQPSISS----CHGNPIIFAHSQFLPLNSLKLRNQSFLSNSRFVKLRARRSSSSSPVVYAAQNQNNFLRVFQTAWKVGKDGIEAGTNLVPDS

Query:  IPRPVARISVAIAALAVGLFLLKSVLSTALFVLSSSTPTTFISLKSYYLLDYLYLFSNYLIEECNKEVFMKECNKGFWMQAMMGAIYFTFIALNKDEGPR
        +PRPVARISVAIAAL++GLFLLKSVLSTA FVL                                               AM+GAIYF FIALNKDEGPR
Subjt:  IPRPVARISVAIAALAVGLFLLKSVLSTALFVLSSSTPTTFISLKSYYLLDYLYLFSNYLIEECNKEVFMKECNKGFWMQAMMGAIYFTFIALNKDEGPR

Query:  GGGGSSSSSTSTDETLEEARRIMEKYK
        GGGGS+SS+ ST+ETLEEAR+IMEKYK
Subjt:  GGGGSSSSSTSTDETLEEARRIMEKYK

XP_023532771.1 uncharacterized protein LOC111794841 [Cucurbita pepo subsp. pepo]

2.6e-59

64.76

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Query:  MASSCLLHNQPSISS----CHGNPIIFAHSQFLPLNSLKLRNQSFLSNSRFVKLRARRSSSSSPVVYAAQNQNNFLRVFQTAWKVGKDGIEAGTNLVPDS
        MASSCL HN PSISS     H N  IFAHSQFLPLNSLKLR QSFLSNSR  KLR  RSS S PVVYAA  QNNFLRVFQT WKVGKDGIEAGT+LVP+S
Subjt:  MASSCLLHNQPSISS----CHGNPIIFAHSQFLPLNSLKLRNQSFLSNSRFVKLRARRSSSSSPVVYAAQNQNNFLRVFQTAWKVGKDGIEAGTNLVPDS

Query:  IPRPVARISVAIAALAVGLFLLKSVLSTALFVLSSSTPTTFISLKSYYLLDYLYLFSNYLIEECNKEVFMKECNKGFWMQAMMGAIYFTFIALNKDEGPR
        +PRPVARISVAIAAL++GLFLLKSVLSTA FVL                                               AM+GAIYF FIALNKDEGPR
Subjt:  IPRPVARISVAIAALAVGLFLLKSVLSTALFVLSSSTPTTFISLKSYYLLDYLYLFSNYLIEECNKEVFMKECNKGFWMQAMMGAIYFTFIALNKDEGPR

Query:  GGGGSSSSSTSTDETLEEARRIMEKYK
        GGGGS+SS+ ST+ETLEEAR+IMEKYK
Subjt:  GGGGSSSSSTSTDETLEEARRIMEKYK

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LCA2 Uncharacterized protein

6.1e-38

69.78

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Query:  MASSCLLHNQPSIS----SCHGNPIIFAHSQFLPLNSLKLRNQSFLSNSRFVKLRARRSSSSSPVVYAAQNQNNFLRVFQTAWKVGKDGIEAGTNLVPDS
        MASSCL HN PSIS    + H NP I  HSQ LPLNSLKL+ QSFL N +  KLR  R S S P+VYAA  QNNFLRVFQT WK+GKDGIEAGT+LVPDS
Subjt:  MASSCLLHNQPSIS----SCHGNPIIFAHSQFLPLNSLKLRNQSFLSNSRFVKLRARRSSSSSPVVYAAQNQNNFLRVFQTAWKVGKDGIEAGTNLVPDS

Query:  IPRPVARISVAIAALAVGLFLLKSVLSTALFVLSSSTPT
        +PRP+ARISV I AL +GLFL KSVLSTALFVL   T T
Subjt:  IPRPVARISVAIAALAVGLFLLKSVLSTALFVLSSSTPT

A0A1S3BHT2 uncharacterized protein LOC103489804

1.5e-52

60.26

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Query:  MASSCLLHNQPSIS----SCHGNPIIFAHSQFLPLNSLKLRNQSFLSNSRFVKLRARRSSSSSPVVYAAQNQNNFLRVFQTAWKVGKDGIEAGTNLVPDS
        MASSCL HN PSIS    + H NP I  HSQFLPLNSLKL+ Q     S+  KLRA R S S P+VYAA  QNNFLRVFQT WK+GKDGIEAGT+LVP S
Subjt:  MASSCLLHNQPSIS----SCHGNPIIFAHSQFLPLNSLKLRNQSFLSNSRFVKLRARRSSSSSPVVYAAQNQNNFLRVFQTAWKVGKDGIEAGTNLVPDS

Query:  IPRPVARISVAIAALAVGLFLLKSVLSTALFVLSSSTPTTFISLKSYYLLDYLYLFSNYLIEECNKEVFMKECNKGFWMQAMMGAIYFTFIALNKDEGPR
        +PRP+ARISV I ALA+GLFL KS+LSTALFVL                                               AMMGAIYF FIALNKDEGPR
Subjt:  IPRPVARISVAIAALAVGLFLLKSVLSTALFVLSSSTPTTFISLKSYYLLDYLYLFSNYLIEECNKEVFMKECNKGFWMQAMMGAIYFTFIALNKDEGPR

Query:  GGGG--SSSSSTSTDETLEEARRIMEKYK
        GGGG  SSSSSTST+ETLEEARRIMEKYK
Subjt:  GGGG--SSSSSTSTDETLEEARRIMEKYK

A0A6J1DZ75 uncharacterized protein LOC111025970

2.6e-52

60.53

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Query:  MASSCLLHNQPSISS----CHGNPIIFAHSQFLPLNSLKLRNQSFLSNSRFVKLRARRSSSSSPVVYAAQNQNNFLRVFQTAWKVGKDGIEAGTNLVPDS
        MASS L HN  SIS      H NP IF HSQFLP NSLKL+ QS  SNS+  KL A R S S P+VYAA  QNNFLRVFQT WK+GKDGIEAGT LVPDS
Subjt:  MASSCLLHNQPSISS----CHGNPIIFAHSQFLPLNSLKLRNQSFLSNSRFVKLRARRSSSSSPVVYAAQNQNNFLRVFQTAWKVGKDGIEAGTNLVPDS

Query:  IPRPVARISVAIAALAVGLFLLKSVLSTALFVLSSSTPTTFISLKSYYLLDYLYLFSNYLIEECNKEVFMKECNKGFWMQAMMGAIYFTFIALNKDEGPR
        +PRP+ARISVAI A  + LFLLKSVLSTALFVL                                               AMMGAIYF FIALNKDEGPR
Subjt:  IPRPVARISVAIAALAVGLFLLKSVLSTALFVLSSSTPTTFISLKSYYLLDYLYLFSNYLIEECNKEVFMKECNKGFWMQAMMGAIYFTFIALNKDEGPR

Query:  GGGGS-SSSSTSTDETLEEARRIMEKYK
        GGGGS SSS+TST+ETLEEARRIMEKYK
Subjt:  GGGGS-SSSSTSTDETLEEARRIMEKYK

A0A6J1ESP6 uncharacterized protein LOC111437405

2.4e-58

63.88

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Query:  MASSCLLHNQPSISS----CHGNPIIFAHSQFLPLNSLKLRNQSFLSNSRFVKLRARRSSSSSPVVYAAQNQNNFLRVFQTAWKVGKDGIEAGTNLVPDS
        MASSCL HN PSISS     H NP IFAHSQFLPLNSLKLR Q FL NSR  KLR  R S S PVVYAA  QNNFLRVFQT WKVGKDGIEAGT LVP S
Subjt:  MASSCLLHNQPSISS----CHGNPIIFAHSQFLPLNSLKLRNQSFLSNSRFVKLRARRSSSSSPVVYAAQNQNNFLRVFQTAWKVGKDGIEAGTNLVPDS

Query:  IPRPVARISVAIAALAVGLFLLKSVLSTALFVLSSSTPTTFISLKSYYLLDYLYLFSNYLIEECNKEVFMKECNKGFWMQAMMGAIYFTFIALNKDEGPR
        +PRPVARISVAIAAL++GLFLLKSVLSTA FVL                                               AM+GAIYF FIALNKDEGPR
Subjt:  IPRPVARISVAIAALAVGLFLLKSVLSTALFVLSSSTPTTFISLKSYYLLDYLYLFSNYLIEECNKEVFMKECNKGFWMQAMMGAIYFTFIALNKDEGPR

Query:  GGGGSSSSSTSTDETLEEARRIMEKYK
        GGGGS+SS+ ST+ETLEEAR+IMEKYK
Subjt:  GGGGSSSSSTSTDETLEEARRIMEKYK

A0A6J1K1P0 uncharacterized protein LOC111491610

1.4e-58

64.32

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Query:  MASSCLLHNQPSISS----CHGNPIIFAHSQFLPLNSLKLRNQSFLSNSRFVKLRARRSSSSSPVVYAAQNQNNFLRVFQTAWKVGKDGIEAGTNLVPDS
        MASSCL HN PSISS     H N  IFAHSQFLPLNSLKLR QSFL  SR  KLR  RSS+S PVVYAA  QNNFLRVFQT WKVGKDGIEAGT+LVPDS
Subjt:  MASSCLLHNQPSISS----CHGNPIIFAHSQFLPLNSLKLRNQSFLSNSRFVKLRARRSSSSSPVVYAAQNQNNFLRVFQTAWKVGKDGIEAGTNLVPDS

Query:  IPRPVARISVAIAALAVGLFLLKSVLSTALFVLSSSTPTTFISLKSYYLLDYLYLFSNYLIEECNKEVFMKECNKGFWMQAMMGAIYFTFIALNKDEGPR
        +PRPVARISVAIAAL++GLFLLKSVLSTA FVL                                               AM+GAIYF FIALNKDEGPR
Subjt:  IPRPVARISVAIAALAVGLFLLKSVLSTALFVLSSSTPTTFISLKSYYLLDYLYLFSNYLIEECNKEVFMKECNKGFWMQAMMGAIYFTFIALNKDEGPR

Query:  GGGGSSSSSTSTDETLEEARRIMEKYK
        GGGGS+SS+ ST+ETLEEAR+IMEKYK
Subjt:  GGGGSSSSSTSTDETLEEARRIMEKYK

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT4G13220.1 unknown protein

1.2e-30

43.36

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Query:  MASSCLLHNQPSISSCHGNPIIFAHSQFL-PLNSLKLRNQSFLS-NSRFVKLRARRSSSSSPVVYAAQNQNNFLRVFQTAWKVGKDGIEAGTNLVPDSIP
        MASS  L+  P           F +S FL P + LKL+N S L+  +R   L+ +R  S + V+ A   Q++FL+V +TAW +GKDGIEAGTNLVP S+P
Subjt:  MASSCLLHNQPSISSCHGNPIIFAHSQFL-PLNSLKLRNQSFLS-NSRFVKLRARRSSSSSPVVYAAQNQNNFLRVFQTAWKVGKDGIEAGTNLVPDSIP

Query:  RPVARISVAIAALAVGLFLLKSVLSTALFVLSSSTPTTFISLKSYYLLDYLYLFSNYLIEECNKEVFMKECNKGFWMQAMMGAIYFTFIALNKDEGPR-G
        RPVARISV IAALAV LF++KS LSTA FVL +                                               MG  YF FIALNKDE P+  
Subjt:  RPVARISVAIAALAVGLFLLKSVLSTALFVLSSSTPTTFISLKSYYLLDYLYLFSNYLIEECNKEVFMKECNKGFWMQAMMGAIYFTFIALNKDEGPR-G

Query:  GGGSSSSSTSTDETLEEARRIMEKYK
        G  +SS S S D+ LEEA++IM+KYK
Subjt:  GGGSSSSSTSTDETLEEARRIMEKYK

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGCTTCTTCATGTCTACTTCACAATCAACCTTCAATTTCTTCATGCCATGGAAATCCAATCATCTTTGCGCATTCACAGTTCCTTCCTTTGAATTCGCTGAAACTCAG
AAATCAATCTTTTCTCTCAAATTCACGGTTTGTGAAGCTTAGAGCTCGGAGATCTTCTTCTTCTTCGCCTGTTGTATATGCTGCTCAGAATCAGAACAATTTCTTGAGAG
TGTTTCAGACAGCTTGGAAGGTTGGAAAGGATGGGATTGAGGCAGGAACAAACCTGGTACCTGACTCTATTCCAAGACCAGTAGCAAGGATATCGGTTGCAATAGCTGCA
TTAGCGGTTGGACTCTTTTTGCTCAAGTCGGTCCTGTCTACAGCCTTATTTGTGCTGTCCTCAAGCACCCCTACTACGTTCATTTCTCTTAAATCTTATTACTTACTAGA
CTACCTTTACTTGTTTTCTAACTATCTGATCGAGGAATGTAACAAAGAAGTTTTCATGAAAGAATGTAACAAAGGATTTTGGATGCAGGCTATGATGGGAGCAATTTATT
TCACATTCATAGCGTTGAATAAAGATGAAGGGCCAAGAGGAGGTGGAGGATCCTCCTCTTCCTCAACCTCCACAGATGAGACTCTTGAAGAAGCCAGAAGAATAATGGAG
AAGTACAAGTAG

mRNA sequence

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Protein sequence

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MASSCLLHNQPSISSCHGNPIIFAHSQFLPLNSLKLRNQSFLSNSRFVKLRARRSSSSSPVVYAAQNQNNFLRVFQTAWKVGKDGIEAGTNLVPDSIPRPVARISVAIAA
LAVGLFLLKSVLSTALFVLSSSTPTTFISLKSYYLLDYLYLFSNYLIEECNKEVFMKECNKGFWMQAMMGAIYFTFIALNKDEGPRGGGGSSSSSTSTDETLEEARRIME
KYK

Sed0027911 (gene) of Chayote v1 genome